Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316160 | XP_013462796.1 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 7.39e-179 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316160 | sp|Q9ZS88|DER22_ARATH | 88.525 | 244 | 28 | 0 | 1 | 244 | 1 | 244 | 2.08e-164 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032120 | Msa0316160 | -0.816468 | 5.444694e-52 | -8.615850e-47 |
| Msa0032400 | Msa0316160 | -0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0038350 | Msa0316160 | 0.818498 | 1.899315e-52 | -8.615850e-47 |
| Msa0050940 | Msa0316160 | -0.802721 | 4.905642e-49 | -8.615850e-47 |
| Msa0054640 | Msa0316160 | -0.816295 | 5.952288e-52 | -8.615850e-47 |
| Msa0063580 | Msa0316160 | -0.812700 | 3.715428e-51 | -8.615850e-47 |
| Msa0145670 | Msa0316160 | -0.818099 | 2.338513e-52 | -8.615850e-47 |
| Msa0185700 | Msa0316160 | -0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0196130 | Msa0316160 | 0.828910 | 6.911604e-55 | -8.615850e-47 |
| Msa0196500 | Msa0316160 | 0.877972 | 4.089432e-69 | -8.615850e-47 |
| Msa0215320 | Msa0316160 | 0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0238400 | Msa0316160 | 0.931509 | 3.397715e-94 | -8.615850e-47 |
| Msa0272480 | Msa0316160 | 0.816898 | 4.362093e-52 | -8.615850e-47 |
| Msa0294560 | Msa0316160 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0312690 | Msa0316160 | 0.824856 | 6.433558e-54 | -8.615850e-47 |
| Msa0316160 | Msa0358170 | -0.832243 | 1.056540e-55 | -8.615850e-47 |
| Msa0316160 | Msa0378080 | -0.815618 | 8.429696e-52 | -8.615850e-47 |
| Msa0316160 | Msa0443500 | -0.824037 | 1.002547e-53 | -8.615850e-47 |
| Msa0316160 | Msa0450050 | -0.816984 | 4.171299e-52 | -8.615850e-47 |
| Msa0316160 | Msa0470180 | -0.820095 | 8.218326e-53 | -8.615850e-47 |
| Msa0316160 | Msa0480980 | -0.804971 | 1.671549e-49 | -8.615850e-47 |
| Msa0316160 | Msa0518040 | -0.817352 | 3.447413e-52 | -8.615850e-47 |
| Msa0316160 | Msa0526640 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0316160 | Msa0579290 | -0.815370 | 9.571386e-52 | -8.615850e-47 |
| Msa0316160 | Msa0579390 | -0.817091 | 3.947413e-52 | -8.615850e-47 |
| Msa0316160 | Msa0581760 | -0.805895 | 1.070397e-49 | -8.615850e-47 |
| Msa0316160 | Msa0719490 | 0.819843 | 9.384400e-53 | -8.615850e-47 |
| Msa0316160 | Msa0746600 | -0.821034 | 5.003744e-53 | -8.615850e-47 |
| Msa0316160 | Msa0769390 | -0.808254 | 3.390352e-50 | -8.615850e-47 |
| Msa0316160 | Msa0802470 | 0.819592 | 1.071371e-52 | -8.615850e-47 |
| Msa0316160 | Msa0812990 | -0.803752 | 3.000108e-49 | -8.615850e-47 |
| Msa0316160 | Msa0853540 | -0.800516 | 1.389391e-48 | -8.615850e-47 |
| Msa0316160 | Msa0936270 | -0.802841 | 4.633802e-49 | -8.615850e-47 |
| Msa0316160 | Msa0968320 | 0.809041 | 2.301631e-50 | -8.615850e-47 |
| Msa0316160 | Msa0969570 | -0.803779 | 2.961832e-49 | -8.615850e-47 |
| Msa0316160 | Msa0981820 | 0.810272 | 1.251989e-50 | -8.615850e-47 |
| Msa0316160 | Msa1020930 | 0.823235 | 1.544747e-53 | -8.615850e-47 |
| Msa0316160 | Msa1036390 | -0.800323 | 1.520930e-48 | -8.615850e-47 |
| Msa0316160 | Msa1040120 | -0.808531 | 2.958630e-50 | -8.615850e-47 |
| Msa0316160 | Msa1055690 | -0.803228 | 3.853898e-49 | -8.615850e-47 |
| Msa0316160 | Msa1104370 | -0.800065 | 1.716406e-48 | -8.615850e-47 |
| Msa0316160 | Msa1170040 | 0.841739 | 3.957895e-58 | -8.615850e-47 |
| Msa0316160 | Msa1188940 | -0.802463 | 5.543287e-49 | -8.615850e-47 |
| Msa0316160 | Msa1222970 | -0.809918 | 1.491781e-50 | -8.615850e-47 |
| Msa0316160 | Msa1255900 | -0.807370 | 5.225469e-50 | -8.615850e-47 |
| Msa0316160 | Msa1264020 | -0.807192 | 5.699681e-50 | -8.615850e-47 |
| Msa0316160 | Msa1335860 | -0.809877 | 1.522394e-50 | -8.615850e-47 |
| Msa0316160 | Msa1342430 | -0.819702 | 1.010771e-52 | -8.615850e-47 |
| Msa0316160 | Msa1367080 | -0.803161 | 3.979007e-49 | -8.615850e-47 |
| Msa0316160 | Msa1398480 | -0.809433 | 1.897007e-50 | -8.615850e-47 |
| Msa0316160 | Msa1411070 | -0.804806 | 1.810452e-49 | -8.615850e-47 |
| Msa0316160 | Msa1454290 | 0.826161 | 3.157734e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316160 | MtrunA17_Chr2g0288201 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 0.0 | 501 |
| Msa0316160 | MtrunA17_Chr8g0389711 | 37.118 | 229 | 130 | 3 | 7 | 230 | 6 | 225 | 4.63e-42 | 143 |
| Msa0316160 | MtrunA17_Chr3g0079071 | 35.681 | 213 | 128 | 2 | 7 | 219 | 6 | 209 | 1.13e-36 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316160 | AT4G04860.1 | 88.525 | 244 | 28 | 0 | 1 | 244 | 1 | 244 | 2.11e-165 | 457 |
| Msa0316160 | AT4G21810.1 | 88.525 | 244 | 28 | 0 | 1 | 244 | 1 | 244 | 2.11e-162 | 449 |
| Msa0316160 | AT4G29330.2 | 40.566 | 212 | 117 | 2 | 7 | 218 | 6 | 208 | 4.91e-49 | 160 |
| Msa0316160 | AT4G29330.1 | 39.906 | 213 | 119 | 2 | 7 | 219 | 6 | 209 | 2.05e-48 | 160 |
Find 88 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAATCAAGTGTTAATT+AGG | 0.192809 | 2_4:+13064072 | Msa0316160:five_prime_UTR |
| TTAGGATTAAAGAGAGATTA+AGG | 0.204481 | 2_4:+13064090 | Msa0316160:five_prime_UTR |
| CAATCTTGGTGGAGTTCTTC+AGG | 0.237760 | 2_4:-13067804 | None:intergenic |
| TAACAATTGCACCCGGAAAA+AGG | 0.258276 | 2_4:-13067898 | None:intergenic |
| TATTGCTTCACAACCAATCT+AGG | 0.280355 | 2_4:-13064575 | None:intergenic |
| GCAGGCCGGGCAACAACAAC+TGG | 0.297242 | 2_4:-13067756 | None:intergenic |
| TGAACGAACGAGAAATTTAC+AGG | 0.313436 | 2_4:-13064039 | None:intergenic |
| TCCTTGTTGGTGCCAGTGCT+TGG | 0.326989 | 2_4:+13067513 | Msa0316160:CDS |
| TTACTAATTTCTTGTACTTC+AGG | 0.333044 | 2_4:+13064615 | Msa0316160:CDS |
| GGTGGAGTTCTTCAGGTTGC+GGG | 0.338628 | 2_4:-13067797 | None:intergenic |
| TAGGAAGCTCATGTGAATAA+AGG | 0.338635 | 2_4:-13067299 | None:intergenic |
| TTATGAATGTAGGTTCTCTT+GGG | 0.342033 | 2_4:+13067482 | Msa0316160:intron |
| TGACTGGAATCGTTCTCCTT+GGG | 0.352195 | 2_4:+13067095 | Msa0316160:CDS |
| TGTGATTAATCAGAGAAAAT+TGG | 0.356046 | 2_4:-13064009 | None:intergenic |
| TTTATGAATGTAGGTTCTCT+TGG | 0.362898 | 2_4:+13067481 | Msa0316160:intron |
| TTCTAGAGGAGAACTCGTTC+AGG | 0.364345 | 2_4:+13067023 | Msa0316160:CDS |
| TCACTGCTGCCTACCTTCCA+TGG | 0.372156 | 2_4:+13067335 | Msa0316160:CDS |
| TTGGGGTTCTCTGTCCTTGT+TGG | 0.373603 | 2_4:+13067500 | Msa0316160:CDS |
| TTTCTTGTACTTCAGGAAGA+TGG | 0.384049 | 2_4:+13064622 | Msa0316160:CDS |
| TCTCATTTCTGTTAAAACTT+TGG | 0.389968 | 2_4:-13067952 | None:intergenic |
| TGACAAAGACCATTCAATCT+TGG | 0.400281 | 2_4:-13067818 | None:intergenic |
| TCTGTACTTGAACCCTAGAT+TGG | 0.401436 | 2_4:+13064562 | Msa0316160:CDS |
| TTGTGAAGCAATATCAGTTT+TGG | 0.401770 | 2_4:+13064585 | Msa0316160:CDS |
| AAATTGGAGAAAGTGAGATT+TGG | 0.402803 | 2_4:-13063993 | None:intergenic |
| TTTATTCACATGAGCTTCCT+AGG | 0.416327 | 2_4:+13067301 | Msa0316160:CDS |
| TTGACTGGAATCGTTCTCCT+TGG | 0.416727 | 2_4:+13067094 | Msa0316160:CDS |
| GATGACTATAAGACTACAAA+TGG | 0.417360 | 2_4:-13068021 | None:intergenic |
| TGGTGGAGTTCTTCAGGTTG+CGG | 0.424337 | 2_4:-13067798 | None:intergenic |
| AGGAAGCTCATGTGAATAAA+GGG | 0.430778 | 2_4:-13067298 | None:intergenic |
| CCTTGTTGGTGCCAGTGCTT+GGG | 0.434475 | 2_4:+13067514 | Msa0316160:CDS |
| CACTGCTGCCTACCTTCCAT+GGG | 0.440571 | 2_4:+13067336 | Msa0316160:CDS |
| CAGTGCTTGGGTAGATCTAC+TGG | 0.443686 | 2_4:+13067526 | Msa0316160:CDS |
| ATGACCCAGTTGTTGTTGCC+CGG | 0.447553 | 2_4:+13067751 | Msa0316160:CDS |
| CAAATCTAACATTGGCAGGC+CGG | 0.461355 | 2_4:-13067770 | None:intergenic |
| TTTGGGGCCACTGTATTGAC+TGG | 0.469493 | 2_4:+13067079 | Msa0316160:CDS |
| TTCTTGTACTTCAGGAAGAT+GGG | 0.470662 | 2_4:+13064623 | Msa0316160:CDS |
| CAACTCATTGACATTTATGA+TGG | 0.474921 | 2_4:+13067168 | Msa0316160:CDS |
| GCAGCAAATCTAACATTGGC+AGG | 0.478288 | 2_4:-13067774 | None:intergenic |
| GATGTCTATCCTCGGATGAC+TGG | 0.483782 | 2_4:+13067681 | Msa0316160:CDS |
| AAATCTAACATTGGCAGGCC+GGG | 0.488090 | 2_4:-13067769 | None:intergenic |
| GCAAACGACTCTGACAAGTA+AGG | 0.501809 | 2_4:-13067127 | None:intergenic |
| AGAGAAACTACTAGATGCCC+AGG | 0.504340 | 2_4:-13068082 | None:intergenic |
| GAACGAGAAGGAAGAAGAAG+AGG | 0.506985 | 2_4:-13063933 | None:intergenic |
| CAAAGACCATTCAATCTTGG+TGG | 0.513494 | 2_4:-13067815 | None:intergenic |
| AGAACTCCACCAAGATTGAA+TGG | 0.519731 | 2_4:+13067809 | Msa0316160:exon |
| TGGCACAAGCGGTTGAAGAA+TGG | 0.522603 | 2_4:+13064127 | Msa0316160:CDS |
| TTCTTGAAGATGTCTATCCT+CGG | 0.524401 | 2_4:+13067673 | Msa0316160:CDS |
| TGGAGAAAGTGAGATTTGGA+TGG | 0.525598 | 2_4:-13063989 | None:intergenic |
| GACTGGAATCGTTCTCCTTG+GGG | 0.528315 | 2_4:+13067096 | Msa0316160:CDS |
| TCTAGAGGAGAACTCGTTCA+GGG | 0.529586 | 2_4:+13067024 | Msa0316160:CDS |
| TATGAATGTAGGTTCTCTTG+GGG | 0.532545 | 2_4:+13067483 | Msa0316160:intron |
| TAGCTATATATTACAAACTT+CGG | 0.532920 | 2_4:-13067861 | None:intergenic |
| CAGTGAAAGTAAAGAGACCT+AGG | 0.533734 | 2_4:-13067318 | None:intergenic |
| TATCTACAAGAACAGAAAAG+AGG | 0.538841 | 2_4:-13067985 | None:intergenic |
| GGGTTCAAGTACAGATGATA+CGG | 0.543090 | 2_4:-13064554 | None:intergenic |
| CTTCAAGAAAATAGTAAGCA+TGG | 0.545004 | 2_4:-13067659 | None:intergenic |
| AGATATGATCGTGTGATCAC+AGG | 0.550700 | 2_4:-13064162 | None:intergenic |
| GCTGCTGTTGTCACCACCAT+CGG | 0.555013 | 2_4:+13064189 | Msa0316160:CDS |
| CATTGGATGAAAGACTGCCC+TGG | 0.561176 | 2_4:+13068064 | Msa0316160:three_prime_UTR |
| ATTGCTTCACAACCAATCTA+GGG | 0.565167 | 2_4:-13064574 | None:intergenic |
| CTATAAGACTACAAATGGAA+TGG | 0.570478 | 2_4:-13068016 | None:intergenic |
| AAAACTTTGGTCATTCGACA+TGG | 0.592840 | 2_4:-13067939 | None:intergenic |
| TTGGATGGAAATTGATGTGA+CGG | 0.595540 | 2_4:-13063974 | None:intergenic |
| CAGTAGATCTACCCAAGCAC+TGG | 0.595736 | 2_4:-13067525 | None:intergenic |
| CGGGGCAGCAAATCTAACAT+TGG | 0.599597 | 2_4:-13067778 | None:intergenic |
| ATTAACAACAATGGCACAAG+CGG | 0.606576 | 2_4:+13064116 | Msa0316160:exon |
| CAGGCCGGGCAACAACAACT+GGG | 0.607750 | 2_4:-13067755 | None:intergenic |
| CCCAAGCACTGGCACCAACA+AGG | 0.610622 | 2_4:-13067514 | None:intergenic |
| ACTGGAATCGTTCTCCTTGG+GGG | 0.615364 | 2_4:+13067097 | Msa0316160:CDS |
| CTTACGCACCCATGGAAGGT+AGG | 0.622292 | 2_4:-13067344 | None:intergenic |
| ATTGGATGAAAGACTGCCCT+GGG | 0.623145 | 2_4:+13068065 | Msa0316160:three_prime_UTR |
| CGTAGAAGAAGAGAACGAGA+AGG | 0.624650 | 2_4:-13063945 | None:intergenic |
| GTAGCTTACGCACCCATGGA+AGG | 0.624745 | 2_4:-13067348 | None:intergenic |
| TAAATGTCAATGAGTTGCTG+AGG | 0.624935 | 2_4:-13067162 | None:intergenic |
| CACCATCGGATGTTCTCTTG+AGG | 0.627849 | 2_4:+13064203 | Msa0316160:CDS |
| TTAAGGAAAATTAACAACAA+TGG | 0.632633 | 2_4:+13064107 | Msa0316160:exon |
| TCGGTACTGCAAGCTTCTAG+AGG | 0.636595 | 2_4:+13067009 | Msa0316160:CDS |
| TCAGAAAATACTCAGCGAAG+TGG | 0.637547 | 2_4:+13067838 | Msa0316160:three_prime_UTR |
| GTGGAGTTCTTCAGGTTGCG+GGG | 0.652676 | 2_4:-13067796 | None:intergenic |
| GGGCGACGACCAGTCATCCG+AGG | 0.661193 | 2_4:-13067690 | None:intergenic |
| CTCAAGAGAACATCCGATGG+TGG | 0.661461 | 2_4:-13064202 | None:intergenic |
| CTAGAGGAGAACTCGTTCAG+GGG | 0.664370 | 2_4:+13067025 | Msa0316160:CDS |
| ATGTAATTAACAATTGCACC+CGG | 0.669033 | 2_4:-13067905 | None:intergenic |
| AATAGTGCTTTGATGAGCGA+TGG | 0.681563 | 2_4:-13067723 | None:intergenic |
| GAACGAACGAGAAATTTACA+GGG | 0.682235 | 2_4:-13064038 | None:intergenic |
| TACCTCAAGAGAACATCCGA+TGG | 0.695857 | 2_4:-13064205 | None:intergenic |
| AACGATTCCAGTCAATACAG+TGG | 0.704187 | 2_4:-13067086 | None:intergenic |
| GAGAAACTACTAGATGCCCA+GGG | 0.706595 | 2_4:-13068081 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTGGTTTAATATT+TGG | + | chr2_4:13064398-13064417 | Msa0316160:intron | 10.0% |
| !!! | TTTTTACCTTTTTTTTTTAT+AGG | + | chr2_4:13064660-13064679 | Msa0316160:intron | 10.0% |
| !! | ATTATAATCAAGTGTTAATT+AGG | + | chr2_4:13064072-13064091 | Msa0316160:five_prime_UTR | 15.0% |
| !!! | AGTTAATTGCTTTTTTTTTT+TGG | + | chr2_4:13064386-13064405 | Msa0316160:intron | 15.0% |
| !!! | TGAATGTTTTTTTTTTTCAA+TGG | + | chr2_4:13065006-13065025 | Msa0316160:intron | 15.0% |
| !!! | TTTGAATGTTTTTTTTTCAA+TGG | + | chr2_4:13065181-13065200 | Msa0316160:intron | 15.0% |
| !!! | TGAATGTTTTTTTTTTTCAA+TGG | + | chr2_4:13065006-13065025 | Msa0316160:intron | 15.0% |
| !!! | TTTGAATGTTTTTTTTTCAA+TGG | + | chr2_4:13065181-13065200 | Msa0316160:intron | 15.0% |
| !!! | ATTTTAAGTTTTATGAATGT+AGG | + | chr2_4:13067472-13067491 | Msa0316160:intron | 15.0% |
| !!! | TATTTTTCTACTATTTGAAA+AGG | + | chr2_4:13068142-13068161 | Msa0316160:three_prime_UTR | 15.0% |
| !! | TTAAGGAAAATTAACAACAA+TGG | + | chr2_4:13064107-13064126 | Msa0316160:exon | 20.0% |
| !!! | CAATTTCTTCTCAATTTTTA+GGG | + | chr2_4:13064232-13064251 | Msa0316160:intron | 20.0% |
| !!! | ATTTTTTTCTCTCGTAATTA+TGG | + | chr2_4:13064261-13064280 | Msa0316160:intron | 20.0% |
| !! | TAATTATGGTGTGTTTAATT+TGG | + | chr2_4:13064275-13064294 | Msa0316160:intron | 20.0% |
| !! | GTTTCAAATTAATGTACTAA+CGG | - | chr2_4:13064340-13064359 | None:intergenic | 20.0% |
| !! | CATTTGCCTATAAAAAAAAA+AGG | - | chr2_4:13064669-13064688 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTATAGGCAAA+TGG | + | chr2_4:13064667-13064686 | Msa0316160:intron | 20.0% |
| !!! | AAATGGTGTTAGAAAATTAT+CGG | + | chr2_4:13064684-13064703 | Msa0316160:intron | 20.0% |
| !! | TCGTAATCTAGTATATTTAT+GGG | - | chr2_4:13065439-13065458 | None:intergenic | 20.0% |
| !! | TAAGGATTAAATATATATGC+AGG | - | chr2_4:13065802-13065821 | None:intergenic | 20.0% |
| !! | TTCACAATTATCAACTTATA+AGG | - | chr2_4:13065820-13065839 | None:intergenic | 20.0% |
| !! | TATTGAATAAGAAAATACCA+TGG | - | chr2_4:13065860-13065879 | None:intergenic | 20.0% |
| !! | TCGTAATCTAGTATATTTAT+GGG | - | chr2_4:13065439-13065458 | None:intergenic | 20.0% |
| !! | TAAGGATTAAATATATATGC+AGG | - | chr2_4:13065802-13065821 | None:intergenic | 20.0% |
| !! | TTCACAATTATCAACTTATA+AGG | - | chr2_4:13065820-13065839 | None:intergenic | 20.0% |
| !! | TATTGAATAAGAAAATACCA+TGG | - | chr2_4:13065860-13065879 | None:intergenic | 20.0% |
| !!! | TAAGAGCATGTAAAAAAAAT+CGG | - | chr2_4:13067059-13067078 | None:intergenic | 20.0% |
| !!! | TTTTTTTACATGCTCTTATT+TGG | + | chr2_4:13067061-13067080 | Msa0316160:CDS | 20.0% |
| !!! | TTTTTTACATGCTCTTATTT+GGG | + | chr2_4:13067062-13067081 | Msa0316160:CDS | 20.0% |
| !! | AACCTGAAAAAGATAAATTA+AGG | - | chr2_4:13067257-13067276 | None:intergenic | 20.0% |
| !! | TGATATGATAACATTAAACT+GGG | + | chr2_4:13067383-13067402 | Msa0316160:intron | 20.0% |
| !! | GAAATTAAATAGTCATATCA+TGG | - | chr2_4:13067579-13067598 | None:intergenic | 20.0% |
| !! | TAGCTATATATTACAAACTT+CGG | - | chr2_4:13067864-13067883 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTCTTATTGCAT+TGG | + | chr2_4:13068047-13068066 | Msa0316160:three_prime_UTR | 20.0% |
| ! | TGTGATTAATCAGAGAAAAT+TGG | - | chr2_4:13064012-13064031 | None:intergenic | 25.0% |
| ! | TTAGGATTAAAGAGAGATTA+AGG | + | chr2_4:13064090-13064109 | Msa0316160:five_prime_UTR | 25.0% |
| ! | CCTAAAAATTGAGAAGAAAT+TGG | - | chr2_4:13064234-13064253 | None:intergenic | 25.0% |
| !! | CCAATTTCTTCTCAATTTTT+AGG | + | chr2_4:13064231-13064250 | Msa0316160:intron | 25.0% |
| !!! | GTTATTGTTGTTTTGATTTC+AGG | + | chr2_4:13064306-13064325 | Msa0316160:intron | 25.0% |
| ! | AATGCACACAATTAATGATT+TGG | - | chr2_4:13064362-13064381 | None:intergenic | 25.0% |
| !! | TTTGGTTTAATATTTGGAAG+AGG | + | chr2_4:13064404-13064423 | Msa0316160:intron | 25.0% |
| !! | GTTGCAATTTGATATTCTTT+TGG | + | chr2_4:13064448-13064467 | Msa0316160:intron | 25.0% |
| !! | TGATTTTGCAGTTAATTGAT+TGG | + | chr2_4:13064499-13064518 | Msa0316160:intron | 25.0% |
| ! | TTACTAATTTCTTGTACTTC+AGG | + | chr2_4:13064615-13064634 | Msa0316160:CDS | 25.0% |
| !! | GATTTTCTATTTATTGCGAT+TGG | + | chr2_4:13064802-13064821 | Msa0316160:intron | 25.0% |
| ! | TAATGTTGTTAACATTCTTG+TGG | + | chr2_4:13064881-13064900 | Msa0316160:intron | 25.0% |
| ! | CTCGTAATCTAGTATATTTA+TGG | - | chr2_4:13065440-13065459 | None:intergenic | 25.0% |
| ! | GTTGAAATTTGAGAAATTGA+TGG | + | chr2_4:13065640-13065659 | Msa0316160:intron | 25.0% |
| ! | AATAATCTCTTGATACAAAG+TGG | + | chr2_4:13065689-13065708 | Msa0316160:intron | 25.0% |
| ! | ATAATCTCTTGATACAAAGT+GGG | + | chr2_4:13065690-13065709 | Msa0316160:intron | 25.0% |
| !!! | AGGCATTGATTATACAATAT+AGG | - | chr2_4:13065782-13065801 | None:intergenic | 25.0% |
| ! | TTATTTATTTAACTGTGCCA+TGG | + | chr2_4:13065840-13065859 | Msa0316160:intron | 25.0% |
| ! | TTTCTTATTCAATATGCGAT+TGG | + | chr2_4:13065892-13065911 | Msa0316160:intron | 25.0% |
| ! | TAATGTTGTTAACATTCTTG+TGG | + | chr2_4:13064881-13064900 | Msa0316160:intron | 25.0% |
| ! | CTCGTAATCTAGTATATTTA+TGG | - | chr2_4:13065440-13065459 | None:intergenic | 25.0% |
| ! | GTTGAAATTTGAGAAATTGA+TGG | + | chr2_4:13065640-13065659 | Msa0316160:intron | 25.0% |
| ! | AATAATCTCTTGATACAAAG+TGG | + | chr2_4:13065689-13065708 | Msa0316160:intron | 25.0% |
| ! | ATAATCTCTTGATACAAAGT+GGG | + | chr2_4:13065690-13065709 | Msa0316160:intron | 25.0% |
| !!! | AGGCATTGATTATACAATAT+AGG | - | chr2_4:13065782-13065801 | None:intergenic | 25.0% |
| ! | TTATTTATTTAACTGTGCCA+TGG | + | chr2_4:13065840-13065859 | Msa0316160:intron | 25.0% |
| !!! | TTCATATGTTTTTTCTTGCT+CGG | + | chr2_4:13066990-13067009 | Msa0316160:CDS | 25.0% |
| !!! | TTTTTACATGCTCTTATTTG+GGG | + | chr2_4:13067063-13067082 | Msa0316160:CDS | 25.0% |
| !! | AGCCTTAATTTATCTTTTTC+AGG | + | chr2_4:13067252-13067271 | Msa0316160:intron | 25.0% |
| !!! | ATCTTTTTCAGGTTTATGTA+TGG | + | chr2_4:13067263-13067282 | Msa0316160:intron | 25.0% |
| ! | CAGTTTAATGTTATCATATC+AGG | - | chr2_4:13067384-13067403 | None:intergenic | 25.0% |
| ! | CTGATATGATAACATTAAAC+TGG | + | chr2_4:13067382-13067401 | Msa0316160:intron | 25.0% |
| ! | TCAATTCTAACTTACAATCA+AGG | + | chr2_4:13067442-13067461 | Msa0316160:intron | 25.0% |
| ! | TGGTATATGTATTCTTTGAA+TGG | - | chr2_4:13067559-13067578 | None:intergenic | 25.0% |
| !! | TCTATTTTCAAACCTTTTTC+CGG | + | chr2_4:13067886-13067905 | Msa0316160:three_prime_UTR | 25.0% |
| ! | TCTCATTTCTGTTAAAACTT+TGG | - | chr2_4:13067955-13067974 | None:intergenic | 25.0% |
| AAATTGGAGAAAGTGAGATT+TGG | - | chr2_4:13063996-13064015 | None:intergenic | 30.0% | |
| ! | TTGTGAAGCAATATCAGTTT+TGG | + | chr2_4:13064585-13064604 | Msa0316160:CDS | 30.0% |
| !!! | TTATCGGCTTCCTTAATTTT+CGG | + | chr2_4:13064700-13064719 | Msa0316160:intron | 30.0% |
| AGTTCAAACTCCGAAAATTA+AGG | - | chr2_4:13064713-13064732 | None:intergenic | 30.0% | |
| ! | AATTTTCGGAGTTTGAACTT+TGG | + | chr2_4:13064714-13064733 | Msa0316160:intron | 30.0% |
| ! | AAAATCTTTTAGTCCCAAGT+AGG | - | chr2_4:13064788-13064807 | None:intergenic | 30.0% |
| ! | TCTATTTATTGCGATTGGTT+TGG | + | chr2_4:13064807-13064826 | Msa0316160:intron | 30.0% |
| ACAACATTAATTAGTGACGT+AGG | - | chr2_4:13064870-13064889 | None:intergenic | 30.0% | |
| !! | TCTGTTTTTCATTTCGTTGT+TGG | + | chr2_4:13064905-13064924 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTTCAATGGCGTG+TGG | + | chr2_4:13065013-13065032 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTCAATGGCGTGT+GGG | + | chr2_4:13065014-13065033 | Msa0316160:intron | 30.0% |
| !! | GAGTATTGGTCATTTGTAAT+TGG | + | chr2_4:13065053-13065072 | Msa0316160:intron | 30.0% |
| TGTAATTGGTCGAGTTAAAT+AGG | + | chr2_4:13065067-13065086 | Msa0316160:intron | 30.0% | |
| ! | TAGGAACTTATAAAGTACCA+TGG | + | chr2_4:13065086-13065105 | Msa0316160:intron | 30.0% |
| ! | AGGAACTTATAAAGTACCAT+GGG | + | chr2_4:13065087-13065106 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTCAATGGCGTGT+GGG | + | chr2_4:13065014-13065033 | Msa0316160:intron | 30.0% |
| !! | GAGTATTGGTCATTTGTAAT+TGG | + | chr2_4:13065053-13065072 | Msa0316160:intron | 30.0% |
| TGTAATTGGTCGAGTTAAAT+AGG | + | chr2_4:13065067-13065086 | Msa0316160:intron | 30.0% | |
| ! | TAGGAACTTATAAAGTACCA+TGG | + | chr2_4:13065086-13065105 | Msa0316160:intron | 30.0% |
| ! | AGGAACTTATAAAGTACCAT+GGG | + | chr2_4:13065087-13065106 | Msa0316160:intron | 30.0% |
| !! | CATTTTAGTAACAATGACAC+CGG | + | chr2_4:13065309-13065328 | Msa0316160:intron | 30.0% |
| AATGAAAGCTATGTTGGATT+TGG | + | chr2_4:13065335-13065354 | Msa0316160:intron | 30.0% | |
| ! | CCTAATTTGTAATGCAAGAA+GGG | - | chr2_4:13065544-13065563 | None:intergenic | 30.0% |
| ! | ACCTAATTTGTAATGCAAGA+AGG | - | chr2_4:13065545-13065564 | None:intergenic | 30.0% |
| ! | CAAATTAGGTAAAGCTGTTT+TGG | + | chr2_4:13065555-13065574 | Msa0316160:intron | 30.0% |
| TCTTATTCAATATGCAGACT+TGG | + | chr2_4:13065868-13065887 | Msa0316160:intron | 30.0% | |
| ! | TATTCAATATGCGATTGGTT+TGG | + | chr2_4:13065897-13065916 | Msa0316160:intron | 30.0% |
| ACAACATTAATTAGTGACGT+AGG | - | chr2_4:13064870-13064889 | None:intergenic | 30.0% | |
| !! | TCTGTTTTTCATTTCGTTGT+TGG | + | chr2_4:13064905-13064924 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTTCAATGGCGTG+TGG | + | chr2_4:13065013-13065032 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTCAATGGCGTGT+GGG | + | chr2_4:13065014-13065033 | Msa0316160:intron | 30.0% |
| !! | GAGTATTGGTCATTTGTAAT+TGG | + | chr2_4:13065053-13065072 | Msa0316160:intron | 30.0% |
| TGTAATTGGTCGAGTTAAAT+AGG | + | chr2_4:13065067-13065086 | Msa0316160:intron | 30.0% | |
| ! | TAGGAACTTATAAAGTACCA+TGG | + | chr2_4:13065086-13065105 | Msa0316160:intron | 30.0% |
| ! | AGGAACTTATAAAGTACCAT+GGG | + | chr2_4:13065087-13065106 | Msa0316160:intron | 30.0% |
| !!! | TTTTTTTTTCAATGGCGTGT+GGG | + | chr2_4:13065014-13065033 | Msa0316160:intron | 30.0% |
| !! | GAGTATTGGTCATTTGTAAT+TGG | + | chr2_4:13065053-13065072 | Msa0316160:intron | 30.0% |
| TGTAATTGGTCGAGTTAAAT+AGG | + | chr2_4:13065067-13065086 | Msa0316160:intron | 30.0% | |
| ! | TAGGAACTTATAAAGTACCA+TGG | + | chr2_4:13065086-13065105 | Msa0316160:intron | 30.0% |
| ! | AGGAACTTATAAAGTACCAT+GGG | + | chr2_4:13065087-13065106 | Msa0316160:intron | 30.0% |
| !! | CATTTTAGTAACAATGACAC+CGG | + | chr2_4:13065309-13065328 | Msa0316160:intron | 30.0% |
| AATGAAAGCTATGTTGGATT+TGG | + | chr2_4:13065335-13065354 | Msa0316160:intron | 30.0% | |
| ! | CCTAATTTGTAATGCAAGAA+GGG | - | chr2_4:13065544-13065563 | None:intergenic | 30.0% |
| ! | ACCTAATTTGTAATGCAAGA+AGG | - | chr2_4:13065545-13065564 | None:intergenic | 30.0% |
| ! | CAAATTAGGTAAAGCTGTTT+TGG | + | chr2_4:13065555-13065574 | Msa0316160:intron | 30.0% |
| TCTTATTCAATATGCAGACT+TGG | + | chr2_4:13065868-13065887 | Msa0316160:intron | 30.0% | |
| CAACTCATTGACATTTATGA+TGG | + | chr2_4:13067168-13067187 | Msa0316160:CDS | 30.0% | |
| AATTAAGGCTTTACATGAGA+GGG | - | chr2_4:13067242-13067261 | None:intergenic | 30.0% | |
| AAATTAAGGCTTTACATGAG+AGG | - | chr2_4:13067243-13067262 | None:intergenic | 30.0% | |
| TTTATGAATGTAGGTTCTCT+TGG | + | chr2_4:13067481-13067500 | Msa0316160:intron | 30.0% | |
| TTATGAATGTAGGTTCTCTT+GGG | + | chr2_4:13067482-13067501 | Msa0316160:intron | 30.0% | |
| ! | AATCTTGACAACATTTTCCA+GGG | + | chr2_4:13067624-13067643 | Msa0316160:intron | 30.0% |
| CTTCAAGAAAATAGTAAGCA+TGG | - | chr2_4:13067662-13067681 | None:intergenic | 30.0% | |
| ! | CTATTTTCAAACCTTTTTCC+GGG | + | chr2_4:13067887-13067906 | Msa0316160:three_prime_UTR | 30.0% |
| ATGTAATTAACAATTGCACC+CGG | - | chr2_4:13067908-13067927 | None:intergenic | 30.0% | |
| TATCTACAAGAACAGAAAAG+AGG | - | chr2_4:13067988-13068007 | None:intergenic | 30.0% | |
| CTATAAGACTACAAATGGAA+TGG | - | chr2_4:13068019-13068038 | None:intergenic | 30.0% | |
| GATGACTATAAGACTACAAA+TGG | - | chr2_4:13068024-13068043 | None:intergenic | 30.0% | |
| TTGGATGGAAATTGATGTGA+CGG | - | chr2_4:13063977-13063996 | None:intergenic | 35.0% | |
| GAACGAACGAGAAATTTACA+GGG | - | chr2_4:13064041-13064060 | None:intergenic | 35.0% | |
| TGAACGAACGAGAAATTTAC+AGG | - | chr2_4:13064042-13064061 | None:intergenic | 35.0% | |
| ATTAACAACAATGGCACAAG+CGG | + | chr2_4:13064116-13064135 | Msa0316160:exon | 35.0% | |
| ATTGCTTCACAACCAATCTA+GGG | - | chr2_4:13064577-13064596 | None:intergenic | 35.0% | |
| TATTGCTTCACAACCAATCT+AGG | - | chr2_4:13064578-13064597 | None:intergenic | 35.0% | |
| TTTCTTGTACTTCAGGAAGA+TGG | + | chr2_4:13064622-13064641 | Msa0316160:CDS | 35.0% | |
| TTCTTGTACTTCAGGAAGAT+GGG | + | chr2_4:13064623-13064642 | Msa0316160:CDS | 35.0% | |
| ! | CGCTAAAGAAGTTCTAACTA+AGG | - | chr2_4:13064741-13064760 | None:intergenic | 35.0% |
| !! | ATTTATTGCGATTGGTTTGG+CGG | + | chr2_4:13064810-13064829 | Msa0316160:intron | 35.0% |
| !!! | GATTGTTTTTTTGCACGTGT+GGG | + | chr2_4:13064931-13064950 | Msa0316160:intron | 35.0% |
| ATGGGTTTAATCCTTGCATT+GGG | + | chr2_4:13065105-13065124 | Msa0316160:intron | 35.0% | |
| AAATGTGATTTCCCAATGCA+AGG | - | chr2_4:13065119-13065138 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTTCAATGGCGTG+TGG | + | chr2_4:13065188-13065207 | Msa0316160:intron | 35.0% |
| ATGGGTTTAATCCTTGCATT+GGG | + | chr2_4:13065105-13065124 | Msa0316160:intron | 35.0% | |
| AAATGTGATTTCCCAATGCA+AGG | - | chr2_4:13065119-13065138 | None:intergenic | 35.0% | |
| CAACATAGCTTTCATTTCAC+CGG | - | chr2_4:13065331-13065350 | None:intergenic | 35.0% | |
| GGTCAAGTGCAAATATAAAG+CGG | - | chr2_4:13065507-13065526 | None:intergenic | 35.0% | |
| CCCTTCTTGCATTACAAATT+AGG | + | chr2_4:13065541-13065560 | Msa0316160:intron | 35.0% | |
| TTTCAACCCTCTTACTGTAT+AGG | - | chr2_4:13065627-13065646 | None:intergenic | 35.0% | |
| AAACGAAAACAGAGATGTGT+GGG | - | chr2_4:13065758-13065777 | None:intergenic | 35.0% | |
| AAAACGAAAACAGAGATGTG+TGG | - | chr2_4:13065759-13065778 | None:intergenic | 35.0% | |
| !!! | GATTGTTTTTTTGCACGTGT+GGG | + | chr2_4:13064931-13064950 | Msa0316160:intron | 35.0% |
| ATGGGTTTAATCCTTGCATT+GGG | + | chr2_4:13065105-13065124 | Msa0316160:intron | 35.0% | |
| AAATGTGATTTCCCAATGCA+AGG | - | chr2_4:13065119-13065138 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTTTCAATGGCGTG+TGG | + | chr2_4:13065188-13065207 | Msa0316160:intron | 35.0% |
| ATGGGTTTAATCCTTGCATT+GGG | + | chr2_4:13065105-13065124 | Msa0316160:intron | 35.0% | |
| AAATGTGATTTCCCAATGCA+AGG | - | chr2_4:13065119-13065138 | None:intergenic | 35.0% | |
| CAACATAGCTTTCATTTCAC+CGG | - | chr2_4:13065331-13065350 | None:intergenic | 35.0% | |
| GGTCAAGTGCAAATATAAAG+CGG | - | chr2_4:13065507-13065526 | None:intergenic | 35.0% | |
| CCCTTCTTGCATTACAAATT+AGG | + | chr2_4:13065541-13065560 | Msa0316160:intron | 35.0% | |
| TTTCAACCCTCTTACTGTAT+AGG | - | chr2_4:13065627-13065646 | None:intergenic | 35.0% | |
| AAACGAAAACAGAGATGTGT+GGG | - | chr2_4:13065758-13065777 | None:intergenic | 35.0% | |
| AAAACGAAAACAGAGATGTG+TGG | - | chr2_4:13065759-13065778 | None:intergenic | 35.0% | |
| TAAATGTCAATGAGTTGCTG+AGG | - | chr2_4:13067165-13067184 | None:intergenic | 35.0% | |
| CATGAGAGGGTTTAAATATG+AGG | - | chr2_4:13067229-13067248 | None:intergenic | 35.0% | |
| AGGAAGCTCATGTGAATAAA+GGG | - | chr2_4:13067301-13067320 | None:intergenic | 35.0% | |
| TAGGAAGCTCATGTGAATAA+AGG | - | chr2_4:13067302-13067321 | None:intergenic | 35.0% | |
| TTTATTCACATGAGCTTCCT+AGG | + | chr2_4:13067301-13067320 | Msa0316160:CDS | 35.0% | |
| TATGAATGTAGGTTCTCTTG+GGG | + | chr2_4:13067483-13067502 | Msa0316160:intron | 35.0% | |
| ! | GAATCTTGACAACATTTTCC+AGG | + | chr2_4:13067623-13067642 | Msa0316160:intron | 35.0% |
| TTCTTGAAGATGTCTATCCT+CGG | + | chr2_4:13067673-13067692 | Msa0316160:CDS | 35.0% | |
| TGACAAAGACCATTCAATCT+TGG | - | chr2_4:13067821-13067840 | None:intergenic | 35.0% | |
| AAAACTTTGGTCATTCGACA+TGG | - | chr2_4:13067942-13067961 | None:intergenic | 35.0% | |
| TGGAGAAAGTGAGATTTGGA+TGG | - | chr2_4:13063992-13064011 | None:intergenic | 40.0% | |
| AGATATGATCGTGTGATCAC+AGG | - | chr2_4:13064165-13064184 | None:intergenic | 40.0% | |
| GGGTTCAAGTACAGATGATA+CGG | - | chr2_4:13064557-13064576 | None:intergenic | 40.0% | |
| TCTGTACTTGAACCCTAGAT+TGG | + | chr2_4:13064562-13064581 | Msa0316160:CDS | 40.0% | |
| !! | GCAATATCAGTTTTGGCGTT+TGG | + | chr2_4:13064592-13064611 | Msa0316160:CDS | 40.0% |
| GTGACGTAGGCACATTAAAA+CGG | - | chr2_4:13064857-13064876 | None:intergenic | 40.0% | |
| !!! | CGATTGTTTTTTTGCACGTG+TGG | + | chr2_4:13064930-13064949 | Msa0316160:intron | 40.0% |
| AAACACACGTGCAATAGAGA+GGG | - | chr2_4:13064987-13065006 | None:intergenic | 40.0% | |
| GAATGTGATTGAGCGAGTAT+TGG | + | chr2_4:13065039-13065058 | Msa0316160:intron | 40.0% | |
| CAATGCAAGGATTAAACCCA+TGG | - | chr2_4:13065106-13065125 | None:intergenic | 40.0% | |
| CATGGGTTTAATCCTTGCAT+TGG | + | chr2_4:13065104-13065123 | Msa0316160:intron | 40.0% | |
| CACACGTGCAATATTAGAGA+GGG | - | chr2_4:13065161-13065180 | None:intergenic | 40.0% | |
| ACACACGTGCAATATTAGAG+AGG | - | chr2_4:13065162-13065181 | None:intergenic | 40.0% | |
| GAATGTGATTGAGCGAGTAT+TGG | + | chr2_4:13065039-13065058 | Msa0316160:intron | 40.0% | |
| CAATGCAAGGATTAAACCCA+TGG | - | chr2_4:13065106-13065125 | None:intergenic | 40.0% | |
| CATGGGTTTAATCCTTGCAT+TGG | + | chr2_4:13065104-13065123 | Msa0316160:intron | 40.0% | |
| CGGTGAAATGAAAGCTATGT+TGG | + | chr2_4:13065329-13065348 | Msa0316160:intron | 40.0% | |
| TGAGGAGTGGTTATTGCTAT+AGG | + | chr2_4:13065369-13065388 | Msa0316160:intron | 40.0% | |
| AGAAGGGAACTAGGCTATTA+AGG | - | chr2_4:13065528-13065547 | None:intergenic | 40.0% | |
| TGTAATGCAAGAAGGGAACT+AGG | - | chr2_4:13065537-13065556 | None:intergenic | 40.0% | |
| !!! | AGGTAAAGCTGTTTTGGTCA+TGG | + | chr2_4:13065561-13065580 | Msa0316160:intron | 40.0% |
| AATGCGTCCTATACAGTAAG+AGG | + | chr2_4:13065617-13065636 | Msa0316160:intron | 40.0% | |
| ATGCGTCCTATACAGTAAGA+GGG | + | chr2_4:13065618-13065637 | Msa0316160:intron | 40.0% | |
| AACGAAAACAGAGATGTGTG+GGG | - | chr2_4:13065757-13065776 | None:intergenic | 40.0% | |
| !! | TCAATATGCGATTGGTTTGG+CGG | + | chr2_4:13065900-13065919 | Msa0316160:intron | 40.0% |
| GTGACGTAGGCACATTAAAA+CGG | - | chr2_4:13064857-13064876 | None:intergenic | 40.0% | |
| !!! | CGATTGTTTTTTTGCACGTG+TGG | + | chr2_4:13064930-13064949 | Msa0316160:intron | 40.0% |
| AAACACACGTGCAATAGAGA+GGG | - | chr2_4:13064987-13065006 | None:intergenic | 40.0% | |
| GAATGTGATTGAGCGAGTAT+TGG | + | chr2_4:13065039-13065058 | Msa0316160:intron | 40.0% | |
| CAATGCAAGGATTAAACCCA+TGG | - | chr2_4:13065106-13065125 | None:intergenic | 40.0% | |
| CATGGGTTTAATCCTTGCAT+TGG | + | chr2_4:13065104-13065123 | Msa0316160:intron | 40.0% | |
| CACACGTGCAATATTAGAGA+GGG | - | chr2_4:13065161-13065180 | None:intergenic | 40.0% | |
| ACACACGTGCAATATTAGAG+AGG | - | chr2_4:13065162-13065181 | None:intergenic | 40.0% | |
| GAATGTGATTGAGCGAGTAT+TGG | + | chr2_4:13065039-13065058 | Msa0316160:intron | 40.0% | |
| CAATGCAAGGATTAAACCCA+TGG | - | chr2_4:13065106-13065125 | None:intergenic | 40.0% | |
| CATGGGTTTAATCCTTGCAT+TGG | + | chr2_4:13065104-13065123 | Msa0316160:intron | 40.0% | |
| CGGTGAAATGAAAGCTATGT+TGG | + | chr2_4:13065329-13065348 | Msa0316160:intron | 40.0% | |
| TGAGGAGTGGTTATTGCTAT+AGG | + | chr2_4:13065369-13065388 | Msa0316160:intron | 40.0% | |
| AGAAGGGAACTAGGCTATTA+AGG | - | chr2_4:13065528-13065547 | None:intergenic | 40.0% | |
| TGTAATGCAAGAAGGGAACT+AGG | - | chr2_4:13065537-13065556 | None:intergenic | 40.0% | |
| !!! | AGGTAAAGCTGTTTTGGTCA+TGG | + | chr2_4:13065561-13065580 | Msa0316160:intron | 40.0% |
| AATGCGTCCTATACAGTAAG+AGG | + | chr2_4:13065617-13065636 | Msa0316160:intron | 40.0% | |
| ATGCGTCCTATACAGTAAGA+GGG | + | chr2_4:13065618-13065637 | Msa0316160:intron | 40.0% | |
| AACGAAAACAGAGATGTGTG+GGG | - | chr2_4:13065757-13065776 | None:intergenic | 40.0% | |
| AACGATTCCAGTCAATACAG+TGG | - | chr2_4:13067089-13067108 | None:intergenic | 40.0% | |
| CAGTGAAAGTAAAGAGACCT+AGG | - | chr2_4:13067321-13067340 | None:intergenic | 40.0% | |
| ! | ATTTTCCAGGGAATGATTGC+TGG | + | chr2_4:13067636-13067655 | Msa0316160:intron | 40.0% |
| !! | ATGAGCGATGGTGTTTTAAG+GGG | - | chr2_4:13067714-13067733 | None:intergenic | 40.0% |
| !! | GATGAGCGATGGTGTTTTAA+GGG | - | chr2_4:13067715-13067734 | None:intergenic | 40.0% |
| ! | TGATGAGCGATGGTGTTTTA+AGG | - | chr2_4:13067716-13067735 | None:intergenic | 40.0% |
| AATAGTGCTTTGATGAGCGA+TGG | - | chr2_4:13067726-13067745 | None:intergenic | 40.0% | |
| AGAACTCCACCAAGATTGAA+TGG | + | chr2_4:13067809-13067828 | Msa0316160:exon | 40.0% | |
| CAAAGACCATTCAATCTTGG+TGG | - | chr2_4:13067818-13067837 | None:intergenic | 40.0% | |
| TCAGAAAATACTCAGCGAAG+TGG | + | chr2_4:13067838-13067857 | Msa0316160:three_prime_UTR | 40.0% | |
| TAACAATTGCACCCGGAAAA+AGG | - | chr2_4:13067901-13067920 | None:intergenic | 40.0% | |
| GAACGAGAAGGAAGAAGAAG+AGG | - | chr2_4:13063936-13063955 | None:intergenic | 45.0% | |
| CGTAGAAGAAGAGAACGAGA+AGG | - | chr2_4:13063948-13063967 | None:intergenic | 45.0% | |
| TACCTCAAGAGAACATCCGA+TGG | - | chr2_4:13064208-13064227 | None:intergenic | 45.0% | |
| ! | AGCGTCTCTTAGCTTTCCAA+CGG | + | chr2_4:13064757-13064776 | Msa0316160:intron | 45.0% |
| !! | TTCCAACGGTGTTACCTACT+TGG | + | chr2_4:13064771-13064790 | Msa0316160:intron | 45.0% |
| !! | TCCAACGGTGTTACCTACTT+GGG | + | chr2_4:13064772-13064791 | Msa0316160:intron | 45.0% |
| CAAACACACGTGCAATAGAG+AGG | - | chr2_4:13064988-13065007 | None:intergenic | 45.0% | |
| CGTGCAATATTAGAGAGGGA+GGG | - | chr2_4:13065157-13065176 | None:intergenic | 45.0% | |
| ACGTGCAATATTAGAGAGGG+AGG | - | chr2_4:13065158-13065177 | None:intergenic | 45.0% | |
| ! | GATTTGGAGCAACAGAAGTG+AGG | + | chr2_4:13065351-13065370 | Msa0316160:intron | 45.0% |
| AAAACAGAGATGTGTGGGGT+GGG | - | chr2_4:13065753-13065772 | None:intergenic | 45.0% | |
| CAAACACACGTGCAATAGAG+AGG | - | chr2_4:13064988-13065007 | None:intergenic | 45.0% | |
| CGTGCAATATTAGAGAGGGA+GGG | - | chr2_4:13065157-13065176 | None:intergenic | 45.0% | |
| ACGTGCAATATTAGAGAGGG+AGG | - | chr2_4:13065158-13065177 | None:intergenic | 45.0% | |
| ! | GATTTGGAGCAACAGAAGTG+AGG | + | chr2_4:13065351-13065370 | Msa0316160:intron | 45.0% |
| AAAACAGAGATGTGTGGGGT+GGG | - | chr2_4:13065753-13065772 | None:intergenic | 45.0% | |
| ! | TTCTAGAGGAGAACTCGTTC+AGG | + | chr2_4:13067023-13067042 | Msa0316160:CDS | 45.0% |
| TCTAGAGGAGAACTCGTTCA+GGG | + | chr2_4:13067024-13067043 | Msa0316160:CDS | 45.0% | |
| TTGACTGGAATCGTTCTCCT+TGG | + | chr2_4:13067094-13067113 | Msa0316160:CDS | 45.0% | |
| TGACTGGAATCGTTCTCCTT+GGG | + | chr2_4:13067095-13067114 | Msa0316160:CDS | 45.0% | |
| ! | AGTAAGGTATCATTCCCCCA+AGG | - | chr2_4:13067114-13067133 | None:intergenic | 45.0% |
| GCAAACGACTCTGACAAGTA+AGG | - | chr2_4:13067130-13067149 | None:intergenic | 45.0% | |
| !!! | TGAGCGATGGTGTTTTAAGG+GGG | - | chr2_4:13067713-13067732 | None:intergenic | 45.0% |
| AAATCTAACATTGGCAGGCC+GGG | - | chr2_4:13067772-13067791 | None:intergenic | 45.0% | |
| CAAATCTAACATTGGCAGGC+CGG | - | chr2_4:13067773-13067792 | None:intergenic | 45.0% | |
| GCAGCAAATCTAACATTGGC+AGG | - | chr2_4:13067777-13067796 | None:intergenic | 45.0% | |
| CAATCTTGGTGGAGTTCTTC+AGG | - | chr2_4:13067807-13067826 | None:intergenic | 45.0% | |
| ATTGGATGAAAGACTGCCCT+GGG | + | chr2_4:13068065-13068084 | Msa0316160:three_prime_UTR | 45.0% | |
| GAGAAACTACTAGATGCCCA+GGG | - | chr2_4:13068084-13068103 | None:intergenic | 45.0% | |
| AGAGAAACTACTAGATGCCC+AGG | - | chr2_4:13068085-13068104 | None:intergenic | 45.0% | |
| TGGCACAAGCGGTTGAAGAA+TGG | + | chr2_4:13064127-13064146 | Msa0316160:CDS | 50.0% | |
| CTCAAGAGAACATCCGATGG+TGG | - | chr2_4:13064205-13064224 | None:intergenic | 50.0% | |
| CACCATCGGATGTTCTCTTG+AGG | + | chr2_4:13064203-13064222 | Msa0316160:CDS | 50.0% | |
| TCCCAAGTAGGTAACACCGT+TGG | - | chr2_4:13064776-13064795 | None:intergenic | 50.0% | |
| ACACGTGCAATAGAGAGGGA+GGG | - | chr2_4:13064983-13065002 | None:intergenic | 50.0% | |
| AGGTGAGTGAGATGTACACG+AGG | + | chr2_4:13065389-13065408 | Msa0316160:intron | 50.0% | |
| TGAGTGAGATGTACACGAGG+TGG | + | chr2_4:13065392-13065411 | Msa0316160:intron | 50.0% | |
| TACACGAGGTGGATGACTGT+GGG | + | chr2_4:13065403-13065422 | Msa0316160:intron | 50.0% | |
| AAACAGAGATGTGTGGGGTG+GGG | - | chr2_4:13065752-13065771 | None:intergenic | 50.0% | |
| GAAAACAGAGATGTGTGGGG+TGG | - | chr2_4:13065754-13065773 | None:intergenic | 50.0% | |
| ACACGTGCAATAGAGAGGGA+GGG | - | chr2_4:13064983-13065002 | None:intergenic | 50.0% | |
| AGGTGAGTGAGATGTACACG+AGG | + | chr2_4:13065389-13065408 | Msa0316160:intron | 50.0% | |
| TGAGTGAGATGTACACGAGG+TGG | + | chr2_4:13065392-13065411 | Msa0316160:intron | 50.0% | |
| TACACGAGGTGGATGACTGT+GGG | + | chr2_4:13065403-13065422 | Msa0316160:intron | 50.0% | |
| AAACAGAGATGTGTGGGGTG+GGG | - | chr2_4:13065752-13065771 | None:intergenic | 50.0% | |
| GAAAACAGAGATGTGTGGGG+TGG | - | chr2_4:13065754-13065773 | None:intergenic | 50.0% | |
| TCGGTACTGCAAGCTTCTAG+AGG | + | chr2_4:13067009-13067028 | Msa0316160:CDS | 50.0% | |
| CTAGAGGAGAACTCGTTCAG+GGG | + | chr2_4:13067025-13067044 | Msa0316160:CDS | 50.0% | |
| ! | TTTGGGGCCACTGTATTGAC+TGG | + | chr2_4:13067079-13067098 | Msa0316160:CDS | 50.0% |
| GACTGGAATCGTTCTCCTTG+GGG | + | chr2_4:13067096-13067115 | Msa0316160:CDS | 50.0% | |
| ACTGGAATCGTTCTCCTTGG+GGG | + | chr2_4:13067097-13067116 | Msa0316160:CDS | 50.0% | |
| TTGGGGTTCTCTGTCCTTGT+TGG | + | chr2_4:13067500-13067519 | Msa0316160:CDS | 50.0% | |
| CAGTAGATCTACCCAAGCAC+TGG | - | chr2_4:13067528-13067547 | None:intergenic | 50.0% | |
| CAGTGCTTGGGTAGATCTAC+TGG | + | chr2_4:13067526-13067545 | Msa0316160:CDS | 50.0% | |
| GATGTCTATCCTCGGATGAC+TGG | + | chr2_4:13067681-13067700 | Msa0316160:CDS | 50.0% | |
| ! | ATGACCCAGTTGTTGTTGCC+CGG | + | chr2_4:13067751-13067770 | Msa0316160:CDS | 50.0% |
| CGGGGCAGCAAATCTAACAT+TGG | - | chr2_4:13067781-13067800 | None:intergenic | 50.0% | |
| !! | TGGTGGAGTTCTTCAGGTTG+CGG | - | chr2_4:13067801-13067820 | None:intergenic | 50.0% |
| CATTGGATGAAAGACTGCCC+TGG | + | chr2_4:13068064-13068083 | Msa0316160:three_prime_UTR | 50.0% | |
| GCTGCTGTTGTCACCACCAT+CGG | + | chr2_4:13064189-13064208 | Msa0316160:CDS | 55.0% | |
| GAGAGGGAGGGAGAAATGCT+AGG | - | chr2_4:13064971-13064990 | None:intergenic | 55.0% | |
| CACACGTGCAATAGAGAGGG+AGG | - | chr2_4:13064984-13065003 | None:intergenic | 55.0% | |
| GAGAGGGAGGGAGAAATGCT+AGG | - | chr2_4:13064971-13064990 | None:intergenic | 55.0% | |
| GGAGCAACAGAAGTGAGGAG+TGG | + | chr2_4:13065356-13065375 | Msa0316160:intron | 55.0% | |
| GTACACGAGGTGGATGACTG+TGG | + | chr2_4:13065402-13065421 | Msa0316160:intron | 55.0% | |
| GAGAGGGAGGGAGAAATGCT+AGG | - | chr2_4:13064971-13064990 | None:intergenic | 55.0% | |
| CACACGTGCAATAGAGAGGG+AGG | - | chr2_4:13064984-13065003 | None:intergenic | 55.0% | |
| GAGAGGGAGGGAGAAATGCT+AGG | - | chr2_4:13064971-13064990 | None:intergenic | 55.0% | |
| GGAGCAACAGAAGTGAGGAG+TGG | + | chr2_4:13065356-13065375 | Msa0316160:intron | 55.0% | |
| GTACACGAGGTGGATGACTG+TGG | + | chr2_4:13065402-13065421 | Msa0316160:intron | 55.0% | |
| TCACTGCTGCCTACCTTCCA+TGG | + | chr2_4:13067335-13067354 | Msa0316160:CDS | 55.0% | |
| CACTGCTGCCTACCTTCCAT+GGG | + | chr2_4:13067336-13067355 | Msa0316160:CDS | 55.0% | |
| CTTACGCACCCATGGAAGGT+AGG | - | chr2_4:13067347-13067366 | None:intergenic | 55.0% | |
| GTAGCTTACGCACCCATGGA+AGG | - | chr2_4:13067351-13067370 | None:intergenic | 55.0% | |
| CTGTGTAGCTTACGCACCCA+TGG | - | chr2_4:13067355-13067374 | None:intergenic | 55.0% | |
| !! | TCCTTGTTGGTGCCAGTGCT+TGG | + | chr2_4:13067513-13067532 | Msa0316160:CDS | 55.0% |
| !! | CCTTGTTGGTGCCAGTGCTT+GGG | + | chr2_4:13067514-13067533 | Msa0316160:CDS | 55.0% |
| CATGGCCAGCAATCATTCCC+TGG | - | chr2_4:13067644-13067663 | None:intergenic | 55.0% | |
| !! | GTGGAGTTCTTCAGGTTGCG+GGG | - | chr2_4:13067799-13067818 | None:intergenic | 55.0% |
| !! | GGTGGAGTTCTTCAGGTTGC+GGG | - | chr2_4:13067800-13067819 | None:intergenic | 55.0% |
| AGAGATGTGTGGGGTGGGGT+GGG | - | chr2_4:13065748-13065767 | None:intergenic | 60.0% | |
| AGAGATGTGTGGGGTGGGGT+GGG | - | chr2_4:13065748-13065767 | None:intergenic | 60.0% | |
| !! | CCCAAGCACTGGCACCAACA+AGG | - | chr2_4:13067517-13067536 | None:intergenic | 60.0% |
| CAGGCCGGGCAACAACAACT+GGG | - | chr2_4:13067758-13067777 | None:intergenic | 60.0% | |
| GAGATGTGTGGGGTGGGGTG+GGG | - | chr2_4:13065747-13065766 | None:intergenic | 65.0% | |
| CAGAGATGTGTGGGGTGGGG+TGG | - | chr2_4:13065749-13065768 | None:intergenic | 65.0% | |
| GAGATGTGTGGGGTGGGGTG+GGG | - | chr2_4:13065747-13065766 | None:intergenic | 65.0% | |
| CAGAGATGTGTGGGGTGGGG+TGG | - | chr2_4:13065749-13065768 | None:intergenic | 65.0% | |
| GCAGGCCGGGCAACAACAAC+TGG | - | chr2_4:13067759-13067778 | None:intergenic | 65.0% | |
| ATGTGTGGGGTGGGGTGGGG+AGG | - | chr2_4:13065744-13065763 | None:intergenic | 70.0% | |
| ATGTGTGGGGTGGGGTGGGG+AGG | - | chr2_4:13065744-13065763 | None:intergenic | 70.0% | |
| GGGCGACGACCAGTCATCCG+AGG | - | chr2_4:13067693-13067712 | None:intergenic | 70.0% | |
| GTGGGGTGGGGTGGGGAGGA+GGG | - | chr2_4:13065740-13065759 | None:intergenic | 75.0% | |
| TGTGGGGTGGGGTGGGGAGG+AGG | - | chr2_4:13065741-13065760 | None:intergenic | 75.0% | |
| GTGGGGTGGGGTGGGGAGGA+GGG | - | chr2_4:13065740-13065759 | None:intergenic | 75.0% | |
| TGTGGGGTGGGGTGGGGAGG+AGG | - | chr2_4:13065741-13065760 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 13063909 | 13068167 | 13063909 | ID=Msa0316160;Name=Msa0316160 |
| chr2_4 | mRNA | 13063909 | 13068167 | 13063909 | ID=Msa0316160-mRNA-1;Parent=Msa0316160;Name=Msa0316160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=217|1|1|1|1|1|6|340|244 |
| chr2_4 | exon | 13063909 | 13064224 | 13063909 | ID=Msa0316160-mRNA-1:exon:4924;Parent=Msa0316160-mRNA-1 |
| chr2_4 | exon | 13064545 | 13064644 | 13064545 | ID=Msa0316160-mRNA-1:exon:4925;Parent=Msa0316160-mRNA-1 |
| chr2_4 | exon | 13066975 | 13067189 | 13066975 | ID=Msa0316160-mRNA-1:exon:4926;Parent=Msa0316160-mRNA-1 |
| chr2_4 | exon | 13067274 | 13067357 | 13067274 | ID=Msa0316160-mRNA-1:exon:4927;Parent=Msa0316160-mRNA-1 |
| chr2_4 | exon | 13067494 | 13067547 | 13067494 | ID=Msa0316160-mRNA-1:exon:4928;Parent=Msa0316160-mRNA-1 |
| chr2_4 | exon | 13067645 | 13068167 | 13067645 | ID=Msa0316160-mRNA-1:exon:4929;Parent=Msa0316160-mRNA-1 |
| chr2_4 | five_prime_UTR | 13063909 | 13064125 | 13063909 | ID=Msa0316160-mRNA-1:five_prime_utr;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13064126 | 13064224 | 13064126 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13064545 | 13064644 | 13064545 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13066975 | 13067189 | 13066975 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13067274 | 13067357 | 13067274 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13067494 | 13067547 | 13067494 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | CDS | 13067645 | 13067827 | 13067645 | ID=Msa0316160-mRNA-1:cds;Parent=Msa0316160-mRNA-1 |
| chr2_4 | three_prime_UTR | 13067828 | 13068167 | 13067828 | ID=Msa0316160-mRNA-1:three_prime_utr;Parent=Msa0316160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
