Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020930 | XP_013448771.1 | 98.408 | 314 | 5 | 0 | 1 | 314 | 97 | 410 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020930 | sp|A4FUZ5|SERC3_BOVIN | 32.320 | 362 | 193 | 11 | 1 | 314 | 114 | 471 | 2.81e-52 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020930 | A0A072TZ77 | 98.408 | 314 | 5 | 0 | 1 | 314 | 114 | 427 | 0.0 | 636 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa1020930 | -0.841366 | 4.962268e-58 | -8.615850e-47 |
| Msa0027540 | Msa1020930 | -0.812338 | 4.457302e-51 | -8.615850e-47 |
| Msa0032120 | Msa1020930 | -0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0038350 | Msa1020930 | 0.872937 | 2.165588e-67 | -8.615850e-47 |
| Msa0044710 | Msa1020930 | -0.803541 | 3.319301e-49 | -8.615850e-47 |
| Msa0048020 | Msa1020930 | -0.807633 | 4.595867e-50 | -8.615850e-47 |
| Msa0049400 | Msa1020930 | 0.839137 | 1.896568e-57 | -8.615850e-47 |
| Msa0063580 | Msa1020930 | -0.805824 | 1.107446e-49 | -8.615850e-47 |
| Msa0075310 | Msa1020930 | -0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa0084680 | Msa1020930 | -0.802009 | 6.874071e-49 | -8.615850e-47 |
| Msa0091770 | Msa1020930 | -0.816623 | 5.026081e-52 | -8.615850e-47 |
| Msa0101320 | Msa1020930 | 0.804799 | 1.815939e-49 | -8.615850e-47 |
| Msa0114250 | Msa1020930 | -0.825844 | 3.755125e-54 | -8.615850e-47 |
| Msa0621120 | Msa1020930 | -0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa0621890 | Msa1020930 | -0.830376 | 3.040285e-55 | -8.615850e-47 |
| Msa0630990 | Msa1020930 | -0.839045 | 2.003517e-57 | -8.615850e-47 |
| Msa0638280 | Msa1020930 | -0.817244 | 3.646212e-52 | -8.615850e-47 |
| Msa0638320 | Msa1020930 | -0.821342 | 4.249190e-53 | -8.615850e-47 |
| Msa0651520 | Msa1020930 | 0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa0657050 | Msa1020930 | -0.837156 | 6.139390e-57 | -8.615850e-47 |
| Msa0677270 | Msa1020930 | -0.822948 | 1.802227e-53 | -8.615850e-47 |
| Msa0701030 | Msa1020930 | -0.804407 | 2.192239e-49 | -8.615850e-47 |
| Msa0707780 | Msa1020930 | -0.811150 | 8.083579e-51 | -8.615850e-47 |
| Msa0730180 | Msa1020930 | -0.808243 | 3.407923e-50 | -8.615850e-47 |
| Msa0754720 | Msa1020930 | 0.815827 | 7.572109e-52 | -8.615850e-47 |
| Msa0756630 | Msa1020930 | 0.802148 | 6.436483e-49 | -8.615850e-47 |
| Msa0760890 | Msa1020930 | -0.806059 | 9.887422e-50 | -8.615850e-47 |
| Msa0792790 | Msa1020930 | 0.855776 | 5.027925e-62 | -8.615850e-47 |
| Msa0812990 | Msa1020930 | -0.800337 | 1.511428e-48 | -8.615850e-47 |
| Msa0813320 | Msa1020930 | 0.825943 | 3.557679e-54 | -8.615850e-47 |
| Msa0820670 | Msa1020930 | -0.806655 | 7.402357e-50 | -8.615850e-47 |
| Msa0828570 | Msa1020930 | -0.829296 | 5.573810e-55 | -8.615850e-47 |
| Msa0837990 | Msa1020930 | -0.829099 | 6.221571e-55 | -8.615850e-47 |
| Msa0137120 | Msa1020930 | 0.809154 | 2.176490e-50 | -8.615850e-47 |
| Msa0141430 | Msa1020930 | -0.806253 | 8.999821e-50 | -8.615850e-47 |
| Msa0149500 | Msa1020930 | -0.806157 | 9.426318e-50 | -8.615850e-47 |
| Msa0156650 | Msa1020930 | 0.846992 | 1.532304e-59 | -8.615850e-47 |
| Msa0159750 | Msa1020930 | -0.838597 | 2.616426e-57 | -8.615850e-47 |
| Msa0168100 | Msa1020930 | -0.825714 | 4.032502e-54 | -8.615850e-47 |
| Msa0168640 | Msa1020930 | 0.823685 | 1.212628e-53 | -8.615850e-47 |
| Msa0169140 | Msa1020930 | 0.805797 | 1.122395e-49 | -8.615850e-47 |
| Msa0172350 | Msa1020930 | -0.803165 | 3.971532e-49 | -8.615850e-47 |
| Msa0173820 | Msa1020930 | -0.801854 | 7.397341e-49 | -8.615850e-47 |
| Msa0182930 | Msa1020930 | -0.822031 | 2.943454e-53 | -8.615850e-47 |
| Msa0185640 | Msa1020930 | 0.837107 | 6.317791e-57 | -8.615850e-47 |
| Msa0196130 | Msa1020930 | 0.848524 | 5.802745e-60 | -8.615850e-47 |
| Msa0200950 | Msa1020930 | 0.833951 | 3.970822e-56 | -8.615850e-47 |
| Msa0207000 | Msa1020930 | -0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0227500 | Msa1020930 | -0.803817 | 2.908619e-49 | -8.615850e-47 |
| Msa0238070 | Msa1020930 | 0.816095 | 6.596936e-52 | -8.615850e-47 |
| Msa0367140 | Msa1020930 | 0.810007 | 1.427584e-50 | -8.615850e-47 |
| Msa0371070 | Msa1020930 | -0.811151 | 8.080743e-51 | -8.615850e-47 |
| Msa0377280 | Msa1020930 | -0.814117 | 1.814125e-51 | -8.615850e-47 |
| Msa0378080 | Msa1020930 | -0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa0399720 | Msa1020930 | -0.819645 | 1.041586e-52 | -8.615850e-47 |
| Msa0423360 | Msa1020930 | 0.834099 | 3.644749e-56 | -8.615850e-47 |
| Msa0425940 | Msa1020930 | -0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0426160 | Msa1020930 | -0.801874 | 7.329669e-49 | -8.615850e-47 |
| Msa0431430 | Msa1020930 | -0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0436280 | Msa1020930 | 0.818088 | 2.352634e-52 | -8.615850e-47 |
| Msa0450050 | Msa1020930 | -0.815227 | 1.030046e-51 | -8.615850e-47 |
| Msa0459910 | Msa1020930 | 0.800205 | 1.607692e-48 | -8.615850e-47 |
| Msa0462590 | Msa1020930 | -0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa0467920 | Msa1020930 | 0.830033 | 3.688833e-55 | -8.615850e-47 |
| Msa0470180 | Msa1020930 | -0.806628 | 7.500451e-50 | -8.615850e-47 |
| Msa0981010 | Msa1020930 | -0.801022 | 1.095473e-48 | -8.615850e-47 |
| Msa0981820 | Msa1020930 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0990520 | Msa1020930 | -0.801075 | 1.068400e-48 | -8.615850e-47 |
| Msa1007610 | Msa1020930 | 0.843478 | 1.366750e-58 | -8.615850e-47 |
| Msa1020930 | Msa1036390 | -0.824380 | 8.331376e-54 | -8.615850e-47 |
| Msa1020930 | Msa1037700 | 0.812462 | 4.189001e-51 | -8.615850e-47 |
| Msa1020930 | Msa1038050 | -0.804173 | 2.452493e-49 | -8.615850e-47 |
| Msa1020930 | Msa1076680 | -0.808572 | 2.900091e-50 | -8.615850e-47 |
| Msa1020930 | Msa1111630 | -0.821614 | 3.676159e-53 | -8.615850e-47 |
| Msa1020930 | Msa1130210 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa1020930 | Msa1143240 | 0.809493 | 1.841163e-50 | -8.615850e-47 |
| Msa1020930 | Msa1157420 | 0.800735 | 1.253851e-48 | -8.615850e-47 |
| Msa1020930 | Msa1164800 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
| Msa1020930 | Msa1170040 | 0.810988 | 8.764014e-51 | -8.615850e-47 |
| Msa1020930 | Msa1171060 | 0.848052 | 7.837549e-60 | -8.615850e-47 |
| Msa1020930 | Msa1183390 | -0.810827 | 9.496857e-51 | -8.615850e-47 |
| Msa1020930 | Msa1188940 | -0.803971 | 2.701490e-49 | -8.615850e-47 |
| Msa1020930 | Msa1204980 | 0.835317 | 1.800183e-56 | -8.615850e-47 |
| Msa1020930 | Msa1205010 | 0.837452 | 5.155196e-57 | -8.615850e-47 |
| Msa1020930 | Msa1217860 | -0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa1020930 | Msa1220230 | -0.809624 | 1.725588e-50 | -8.615850e-47 |
| Msa1020930 | Msa1221560 | -0.802934 | 4.433264e-49 | -8.615850e-47 |
| Msa1020930 | Msa1222970 | -0.818230 | 2.184532e-52 | -8.615850e-47 |
| Msa1020930 | Msa1223460 | -0.818986 | 1.472017e-52 | -8.615850e-47 |
| Msa1020930 | Msa1256540 | 0.833626 | 4.787577e-56 | -8.615850e-47 |
| Msa1020930 | Msa1264020 | -0.818717 | 1.694403e-52 | -8.615850e-47 |
| Msa1020930 | Msa1265960 | -0.860575 | 1.876743e-63 | -8.615850e-47 |
| Msa1020930 | Msa1269580 | 0.822394 | 2.425338e-53 | -8.615850e-47 |
| Msa1020930 | Msa1284520 | -0.802408 | 5.689264e-49 | -8.615850e-47 |
| Msa1020930 | Msa1296960 | 0.833031 | 6.734094e-56 | -8.615850e-47 |
| Msa1020930 | Msa1324000 | -0.814401 | 1.570074e-51 | -8.615850e-47 |
| Msa1020930 | Msa1326000 | -0.810110 | 1.356672e-50 | -8.615850e-47 |
| Msa1020930 | Msa1342430 | -0.804526 | 2.070750e-49 | -8.615850e-47 |
| Msa1020930 | Msa1367080 | -0.808593 | 2.870239e-50 | -8.615850e-47 |
| Msa1020930 | Msa1369700 | -0.803230 | 3.850361e-49 | -8.615850e-47 |
| Msa1020930 | Msa1385900 | -0.823332 | 1.466201e-53 | -8.615850e-47 |
| Msa1020930 | Msa1411070 | -0.800310 | 1.530592e-48 | -8.615850e-47 |
| Msa1020930 | Msa1427830 | -0.819051 | 1.422711e-52 | -8.615850e-47 |
| Msa1020930 | Msa1429360 | 0.818709 | 1.701714e-52 | -8.615850e-47 |
| Msa1020930 | Msa1431000 | -0.848205 | 7.110332e-60 | -8.615850e-47 |
| Msa1020930 | Msa1439960 | -0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa1020930 | Msa1447160 | 0.812351 | 4.429164e-51 | -8.615850e-47 |
| Msa1020930 | Msa1447230 | -0.803872 | 2.832713e-49 | -8.615850e-47 |
| Msa1020930 | Msa1454110 | -0.802020 | 6.838845e-49 | -8.615850e-47 |
| Msa1020930 | Msa1454290 | 0.833259 | 5.909236e-56 | -8.615850e-47 |
| Msa0239660 | Msa1020930 | -0.803408 | 3.536509e-49 | -8.615850e-47 |
| Msa0258670 | Msa1020930 | 0.847598 | 1.044932e-59 | -8.615850e-47 |
| Msa0267760 | Msa1020930 | -0.809143 | 2.188695e-50 | -8.615850e-47 |
| Msa0272480 | Msa1020930 | 0.815022 | 1.143551e-51 | -8.615850e-47 |
| Msa0288240 | Msa1020930 | -0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0288330 | Msa1020930 | -0.833364 | 5.565192e-56 | -8.615850e-47 |
| Msa0294560 | Msa1020930 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
| Msa0298940 | Msa1020930 | -0.801917 | 7.181851e-49 | -8.615850e-47 |
| Msa0298970 | Msa1020930 | -0.817395 | 3.371732e-52 | -8.615850e-47 |
| Msa0301180 | Msa1020930 | -0.811469 | 6.892067e-51 | -8.615850e-47 |
| Msa0312690 | Msa1020930 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0316160 | Msa1020930 | 0.823235 | 1.544747e-53 | -8.615850e-47 |
| Msa0320540 | Msa1020930 | -0.806053 | 9.914257e-50 | -8.615850e-47 |
| Msa0325470 | Msa1020930 | -0.804651 | 1.950586e-49 | -8.615850e-47 |
| Msa0326670 | Msa1020930 | -0.822420 | 2.391272e-53 | -8.615850e-47 |
| Msa0340550 | Msa1020930 | -0.804460 | 2.137919e-49 | -8.615850e-47 |
| Msa0342340 | Msa1020930 | 0.835191 | 1.936926e-56 | -8.615850e-47 |
| Msa0344070 | Msa1020930 | -0.803983 | 2.686707e-49 | -8.615850e-47 |
| Msa0351980 | Msa1020930 | -0.804330 | 2.274621e-49 | -8.615850e-47 |
| Msa0358170 | Msa1020930 | -0.820093 | 8.229246e-53 | -8.615850e-47 |
| Msa0511720 | Msa1020930 | 0.801083 | 1.064551e-48 | -8.615850e-47 |
| Msa0516450 | Msa1020930 | -0.807341 | 5.300720e-50 | -8.615850e-47 |
| Msa0518040 | Msa1020930 | -0.808942 | 2.417319e-50 | -8.615850e-47 |
| Msa0524050 | Msa1020930 | -0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0524890 | Msa1020930 | 0.801908 | 7.212726e-49 | -8.615850e-47 |
| Msa0526640 | Msa1020930 | 0.868489 | 6.287612e-66 | -8.615850e-47 |
| Msa0526710 | Msa1020930 | -0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa0527600 | Msa1020930 | -0.818725 | 1.687110e-52 | -8.615850e-47 |
| Msa0531990 | Msa1020930 | 0.818983 | 1.474052e-52 | -8.615850e-47 |
| Msa0532100 | Msa1020930 | 0.818361 | 2.040347e-52 | -8.615850e-47 |
| Msa0535060 | Msa1020930 | -0.804035 | 2.620719e-49 | -8.615850e-47 |
| Msa0546380 | Msa1020930 | -0.809779 | 1.598427e-50 | -8.615850e-47 |
| Msa0564930 | Msa1020930 | -0.809134 | 2.198826e-50 | -8.615850e-47 |
| Msa0574170 | Msa1020930 | -0.823787 | 1.147736e-53 | -8.615850e-47 |
| Msa0575250 | Msa1020930 | -0.809949 | 1.469394e-50 | -8.615850e-47 |
| Msa0576420 | Msa1020930 | -0.803989 | 2.678270e-49 | -8.615850e-47 |
| Msa0579290 | Msa1020930 | -0.811556 | 6.599298e-51 | -8.615850e-47 |
| Msa0579390 | Msa1020930 | -0.808756 | 2.648738e-50 | -8.615850e-47 |
| Msa0583740 | Msa1020930 | -0.801166 | 1.023564e-48 | -8.615850e-47 |
| Msa0583790 | Msa1020930 | -0.811441 | 6.991247e-51 | -8.615850e-47 |
| Msa0589640 | Msa1020930 | -0.808323 | 3.277669e-50 | -8.615850e-47 |
| Msa0861040 | Msa1020930 | 0.801963 | 7.026089e-49 | -8.615850e-47 |
| Msa0867050 | Msa1020930 | 0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0890250 | Msa1020930 | -0.800359 | 1.495523e-48 | -8.615850e-47 |
| Msa0894890 | Msa1020930 | -0.800136 | 1.659970e-48 | -8.615850e-47 |
| Msa0909710 | Msa1020930 | -0.850087 | 2.129411e-60 | -8.615850e-47 |
| Msa0937940 | Msa1020930 | -0.804859 | 1.764561e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020930 | MtrunA17_Chr7g0237091 | 98.408 | 314 | 5 | 0 | 1 | 314 | 97 | 410 | 0.0 | 636 |
| Msa1020930 | MtrunA17_Chr2g0287641 | 63.208 | 318 | 111 | 4 | 1 | 314 | 93 | 408 | 3.66e-144 | 412 |
| Msa1020930 | MtrunA17_Chr6g0485111 | 34.528 | 307 | 181 | 7 | 9 | 313 | 110 | 398 | 8.90e-51 | 172 |
| Msa1020930 | MtrunA17_Chr8g0390691 | 30.892 | 314 | 192 | 7 | 4 | 313 | 101 | 393 | 1.48e-46 | 161 |
| Msa1020930 | MtrunA17_Chr1g0169271 | 29.487 | 312 | 197 | 7 | 5 | 312 | 118 | 410 | 3.53e-40 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020930 | AT1G16180.2 | 81.646 | 316 | 56 | 1 | 1 | 314 | 97 | 412 | 0.0 | 506 |
| Msa1020930 | AT1G16180.1 | 81.646 | 316 | 56 | 1 | 1 | 314 | 97 | 412 | 0.0 | 506 |
| Msa1020930 | AT3G06170.1 | 64.353 | 317 | 108 | 5 | 1 | 314 | 94 | 408 | 1.72e-140 | 403 |
| Msa1020930 | AT2G33205.7 | 33.443 | 305 | 184 | 7 | 10 | 312 | 13 | 300 | 1.49e-49 | 167 |
| Msa1020930 | AT2G33205.2 | 33.443 | 305 | 184 | 7 | 10 | 312 | 28 | 315 | 2.05e-49 | 167 |
| Msa1020930 | AT2G33205.8 | 33.443 | 305 | 184 | 7 | 10 | 312 | 123 | 410 | 2.40e-48 | 167 |
| Msa1020930 | AT2G33205.5 | 33.443 | 305 | 184 | 7 | 10 | 312 | 123 | 410 | 2.40e-48 | 167 |
| Msa1020930 | AT2G33205.1 | 33.443 | 305 | 182 | 7 | 10 | 312 | 123 | 408 | 2.79e-48 | 167 |
| Msa1020930 | AT3G24460.2 | 31.949 | 313 | 196 | 6 | 3 | 313 | 106 | 403 | 5.03e-48 | 166 |
| Msa1020930 | AT3G24460.1 | 31.949 | 313 | 196 | 6 | 3 | 313 | 106 | 403 | 5.03e-48 | 166 |
| Msa1020930 | AT4G13345.1 | 31.731 | 312 | 194 | 5 | 3 | 313 | 99 | 392 | 2.09e-45 | 159 |
| Msa1020930 | AT4G13345.2 | 31.090 | 312 | 196 | 5 | 3 | 313 | 99 | 392 | 1.92e-44 | 156 |
| Msa1020930 | AT4G13345.6 | 31.090 | 312 | 196 | 5 | 3 | 313 | 99 | 392 | 1.92e-44 | 156 |
| Msa1020930 | AT2G33205.9 | 32.534 | 292 | 178 | 7 | 10 | 299 | 123 | 397 | 1.28e-42 | 151 |
| Msa1020930 | AT4G13345.4 | 31.208 | 298 | 186 | 5 | 3 | 299 | 99 | 378 | 1.16e-39 | 144 |
| Msa1020930 | AT2G33205.6 | 31.559 | 263 | 161 | 7 | 10 | 270 | 123 | 368 | 5.53e-34 | 128 |
| Msa1020930 | AT4G13345.5 | 29.588 | 267 | 169 | 5 | 3 | 268 | 99 | 347 | 3.18e-31 | 120 |
| Msa1020930 | AT2G33205.3 | 27.700 | 213 | 149 | 4 | 10 | 218 | 123 | 334 | 1.14e-23 | 99.4 |
| Msa1020930 | AT2G33205.4 | 27.700 | 213 | 149 | 4 | 10 | 218 | 123 | 334 | 1.14e-23 | 99.4 |
| Msa1020930 | AT4G13345.3 | 30.636 | 173 | 118 | 2 | 3 | 174 | 99 | 270 | 3.69e-22 | 94.7 |
| Msa1020930 | AT4G13345.7 | 30.636 | 173 | 118 | 2 | 3 | 174 | 99 | 270 | 3.69e-22 | 94.7 |
Find 93 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTTGTTTACAGGTAAA+TGG | 0.242680 | 7_1:-45008316 | Msa1020930:intron |
| TTCCACTGGCTCTCTTACTT+TGG | 0.277354 | 7_1:-45008176 | Msa1020930:CDS |
| TCCACTGGCTCTCTTACTTT+GGG | 0.280555 | 7_1:-45008175 | Msa1020930:CDS |
| TGTTCAAGTTGTGCTCTTGT+TGG | 0.294130 | 7_1:-45009264 | Msa1020930:CDS |
| TAAACTATATATATTTATTC+AGG | 0.299238 | 7_1:+45007355 | None:intergenic |
| AGTTATCTGTTGGTGCCTTC+TGG | 0.301944 | 7_1:-45009566 | Msa1020930:CDS |
| CAACTGCTTTGCTATACTTA+TGG | 0.303105 | 7_1:-45007602 | Msa1020930:CDS |
| CGTGGGGTGGCCTTCAGTTT+GGG | 0.314110 | 7_1:-45007646 | Msa1020930:CDS |
| GCAGAAACAATATCGAAGTT+TGG | 0.320810 | 7_1:-45009305 | Msa1020930:intron |
| TTCATCTTCAAGTCATAATA+AGG | 0.329442 | 7_1:+45009787 | None:intergenic |
| TTTCATTTCTTCACGCCATC+TGG | 0.334760 | 7_1:-45008998 | Msa1020930:CDS |
| CTCGTGATGGCTTGCATCAT+GGG | 0.341294 | 7_1:-45009603 | Msa1020930:CDS |
| GGGTCCGGATTGTCACTTGC+TGG | 0.349478 | 7_1:-45007626 | Msa1020930:CDS |
| ACGTGGGGTGGCCTTCAGTT+TGG | 0.350578 | 7_1:-45007647 | Msa1020930:CDS |
| CCTCGTGATGGCTTGCATCA+TGG | 0.360125 | 7_1:-45009604 | Msa1020930:CDS |
| AGCAGGATGCAAAGCTACTA+TGG | 0.375060 | 7_1:+45008913 | None:intergenic |
| CACTATTCTGGCTACTATGA+TGG | 0.378652 | 7_1:-45009650 | Msa1020930:exon |
| GTGTATTCTGCCGTGCGTGC+TGG | 0.380861 | 7_1:-45008127 | Msa1020930:CDS |
| ACGTATTTGTAAAATGTTGT+AGG | 0.381741 | 7_1:-45009760 | Msa1020930:five_prime_UTR |
| GCAGTTCTTCGTGTTAGCTT+TGG | 0.391753 | 7_1:-45009688 | Msa1020930:five_prime_UTR |
| TTGGATATGATGAGCAGTTC+TGG | 0.396236 | 7_1:-45009211 | Msa1020930:intron |
| AAGGCATATGAATATGTAAC+TGG | 0.407200 | 7_1:+45007762 | None:intergenic |
| ACCATTGCACTCGTAATCTC+TGG | 0.409135 | 7_1:+45008222 | None:intergenic |
| CAAACAAATATATAGTAGTT+AGG | 0.409658 | 7_1:+45007492 | None:intergenic |
| TCCCTCTCGGGGAACATGAT+AGG | 0.410613 | 7_1:+45007567 | None:intergenic |
| AGAGCCAGTGGAAACAGCTT+TGG | 0.410773 | 7_1:+45008186 | None:intergenic |
| AGGGAAGCCTTTGCTTCCAT+TGG | 0.430704 | 7_1:-45007820 | Msa1020930:CDS |
| CGTATTTGTAAAATGTTGTA+GGG | 0.448340 | 7_1:-45009759 | Msa1020930:five_prime_UTR |
| GTCTCAAACCACTCACGGCT+TGG | 0.455362 | 7_1:+45009715 | None:intergenic |
| TAAAATGATATTACAGAAGC+AGG | 0.455370 | 7_1:+45008283 | None:intergenic |
| ACCACTTAGAACTCCCTCTC+GGG | 0.455883 | 7_1:+45007555 | None:intergenic |
| GGTGGCCTTCAGTTTGGGTC+CGG | 0.455885 | 7_1:-45007641 | Msa1020930:CDS |
| GGTCCGGATTGTCACTTGCT+GGG | 0.471690 | 7_1:-45007625 | Msa1020930:CDS |
| CAGCACGAGGTGAGCTTGGT+GGG | 0.475655 | 7_1:+45008083 | None:intergenic |
| GTGGTTTGCTCAATTTCTCA+TGG | 0.475857 | 7_1:-45007537 | Msa1020930:three_prime_UTR |
| TTTGCTTCCATTGGATGCTA+AGG | 0.484701 | 7_1:-45007811 | Msa1020930:CDS |
| TTGCCCAGCAAGTGACAATC+CGG | 0.490616 | 7_1:+45007622 | None:intergenic |
| CTGCAATGCTTCTGACAGGT+TGG | 0.496263 | 7_1:-45007704 | Msa1020930:CDS |
| ACAATTGAAAACACGCCCAT+TGG | 0.501051 | 7_1:+45007394 | None:intergenic |
| CGATGGAATGACACATGGGT+TGG | 0.508752 | 7_1:-45009230 | Msa1020930:CDS |
| TTACCAGCACGAGGTGAGCT+TGG | 0.512418 | 7_1:+45008079 | None:intergenic |
| ACAGGTTGGTCTACCTCTGT+TGG | 0.513172 | 7_1:-45007690 | Msa1020930:CDS |
| CACTCCAAAGCTGTTTCCAC+TGG | 0.514617 | 7_1:-45008190 | Msa1020930:CDS |
| TCCTATCATGTTCCCCGAGA+GGG | 0.515037 | 7_1:-45007568 | Msa1020930:CDS |
| GAGTGGTAAGTTGGTTGACG+TGG | 0.518500 | 7_1:-45007664 | Msa1020930:CDS |
| ATTTCTCATGGCTCTGAGGA+AGG | 0.520938 | 7_1:-45007525 | Msa1020930:three_prime_UTR |
| CTCAATTTCTCATGGCTCTG+AGG | 0.521964 | 7_1:-45007529 | Msa1020930:three_prime_UTR |
| AGAGAAAATCAAGTGGAAGA+AGG | 0.522573 | 7_1:+45007743 | None:intergenic |
| ACAATATCGAAGTTTGGCTC+TGG | 0.525610 | 7_1:-45009299 | Msa1020930:CDS |
| TAAAAGCTGATCATCTCGTT+CGG | 0.533573 | 7_1:+45009523 | None:intergenic |
| CCAGCACGAGGTGAGCTTGG+TGG | 0.535233 | 7_1:+45008082 | None:intergenic |
| CCACCAAGCTCACCTCGTGC+TGG | 0.536510 | 7_1:-45008082 | Msa1020930:intron |
| GGCAGAAGATCCAGCACGCA+CGG | 0.537351 | 7_1:+45008117 | None:intergenic |
| TCTTCATCCTTAGCATCCAA+TGG | 0.538427 | 7_1:+45007804 | None:intergenic |
| TCTACCTCTGTTGGAGAGAG+TGG | 0.544514 | 7_1:-45007681 | Msa1020930:CDS |
| TCGTGATGGCTTGCATCATG+GGG | 0.548269 | 7_1:-45009602 | Msa1020930:CDS |
| AACACCCGAGAACACAAAAG+TGG | 0.551272 | 7_1:+45009024 | None:intergenic |
| CCCCGAGAGGGAGTTCTAAG+TGG | 0.552012 | 7_1:-45007556 | Msa1020930:exon |
| GTTCCACAGTCTTGTCCAGA+TGG | 0.553670 | 7_1:+45008983 | None:intergenic |
| TATTCTGCAATGCTTCTGAC+AGG | 0.554920 | 7_1:-45007708 | Msa1020930:CDS |
| TGTTGGAGAGAGTGGTAAGT+TGG | 0.560804 | 7_1:-45007673 | Msa1020930:CDS |
| ATTCTGGCTACTATGATGGT+TGG | 0.561002 | 7_1:-45009646 | Msa1020930:exon |
| GTATCTCTGCTATAGTGCAC+TGG | 0.561361 | 7_1:-45008254 | Msa1020930:CDS |
| AACCACTTAGAACTCCCTCT+CGG | 0.562795 | 7_1:+45007554 | None:intergenic |
| GTTATGAATGACAATTCCAA+TGG | 0.564254 | 7_1:-45007410 | Msa1020930:three_prime_UTR |
| TTCATCGATGGAATGACACA+TGG | 0.568693 | 7_1:-45009235 | Msa1020930:CDS |
| CATCAGTCTCAAACCACTCA+CGG | 0.575605 | 7_1:+45009710 | None:intergenic |
| TTATGAATGACAATTCCAAT+GGG | 0.577676 | 7_1:-45007409 | Msa1020930:three_prime_UTR |
| AGTGGTAAGTTGGTTGACGT+GGG | 0.580162 | 7_1:-45007663 | Msa1020930:CDS |
| TTAGCATCCAATGGAAGCAA+AGG | 0.580922 | 7_1:+45007813 | None:intergenic |
| TCCCAAAGTAAGAGAGCCAG+TGG | 0.584338 | 7_1:+45008174 | None:intergenic |
| ACTCAGAAGGATCCTCGTGA+TGG | 0.591184 | 7_1:-45009616 | Msa1020930:CDS |
| AACAAACTCCAAGCCGTGAG+TGG | 0.592734 | 7_1:-45009723 | Msa1020930:five_prime_UTR |
| CCATTGCACTCGTAATCTCT+GGG | 0.592953 | 7_1:+45008223 | None:intergenic |
| AGCACGAGGTGAGCTTGGTG+GGG | 0.602144 | 7_1:+45008084 | None:intergenic |
| ACAATCCGGACCCAAACTGA+AGG | 0.613766 | 7_1:+45007636 | None:intergenic |
| GGTTGGCGTCAAAACTCAGA+AGG | 0.617467 | 7_1:-45009629 | Msa1020930:CDS |
| ACGCCATCTGGACAAGACTG+TGG | 0.625844 | 7_1:-45008986 | Msa1020930:CDS |
| GTAAGTTGGTTGACGTGGGG+TGG | 0.626195 | 7_1:-45007659 | Msa1020930:CDS |
| GTGGTAAGTTGGTTGACGTG+GGG | 0.627255 | 7_1:-45007662 | Msa1020930:CDS |
| CCCAGAGATTACGAGTGCAA+TGG | 0.637382 | 7_1:-45008223 | Msa1020930:CDS |
| GGATGATGAAAGTTATCTGT+TGG | 0.642116 | 7_1:-45009576 | Msa1020930:CDS |
| CCATGATGCAAGCCATCACG+AGG | 0.642661 | 7_1:+45009604 | None:intergenic |
| CTTACCACTCTCTCCAACAG+AGG | 0.657529 | 7_1:+45007677 | None:intergenic |
| TAGCAAGAGAGAAAATCAAG+TGG | 0.659036 | 7_1:+45007736 | None:intergenic |
| TTTAATGATTTACCAGCACG+AGG | 0.659959 | 7_1:+45008070 | None:intergenic |
| AAAACATAAAGATAACCAGA+AGG | 0.662610 | 7_1:+45009551 | None:intergenic |
| CCACTTAGAACTCCCTCTCG+GGG | 0.670567 | 7_1:+45007556 | None:intergenic |
| TGTTTCACTTGTCTGTTACG+TGG | 0.674098 | 7_1:-45009047 | Msa1020930:CDS |
| CTCCTATCATGTTCCCCGAG+AGG | 0.674148 | 7_1:-45007569 | Msa1020930:CDS |
| CGTGATGGCTTGCATCATGG+GGG | 0.676109 | 7_1:-45009601 | Msa1020930:CDS |
| GCTTGGTGGGGAAAGCACTG+CGG | 0.746991 | 7_1:+45008096 | None:intergenic |
| TCATCGATGGAATGACACAT+GGG | 0.749727 | 7_1:-45009234 | Msa1020930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTTTTAATTTTTA+TGG | - | chr7_1:45007971-45007990 | Msa1020930:intron | 0.0% |
| !! | AACAATATTTAATAAATAAC+AGG | + | chr7_1:45008411-45008430 | None:intergenic | 10.0% |
| !! | TAAACTATATATATTTATTC+AGG | + | chr7_1:45009748-45009767 | None:intergenic | 10.0% |
| !!! | ATTATTTTACTTATGTAACA+TGG | - | chr7_1:45007932-45007951 | Msa1020930:intron | 15.0% |
| !!! | CTATTTATAAGAGAAATTTT+GGG | - | chr7_1:45008512-45008531 | Msa1020930:intron | 15.0% |
| !!! | TATTTATAAGAGAAATTTTG+GGG | - | chr7_1:45008513-45008532 | Msa1020930:intron | 15.0% |
| !!! | TATATATAACTCAATTTTTC+TGG | - | chr7_1:45008668-45008687 | Msa1020930:intron | 15.0% |
| !! | TCTACAAAATAAAGAAATAT+TGG | + | chr7_1:45009058-45009077 | None:intergenic | 15.0% |
| !!! | TTGATGATTTTACTAACAAA+AGG | + | chr7_1:45007684-45007703 | None:intergenic | 20.0% |
| !!! | GTAATTTTTTTTGAAGCTTT+TGG | - | chr7_1:45007756-45007775 | Msa1020930:CDS | 20.0% |
| !! | CATTGAAATGAAAAAGATAT+TGG | + | chr7_1:45008142-45008161 | None:intergenic | 20.0% |
| !! | CCAAAATTTCTCTTATAAAT+AGG | + | chr7_1:45008514-45008533 | None:intergenic | 20.0% |
| !!! | CCTATTTATAAGAGAAATTT+TGG | - | chr7_1:45008511-45008530 | Msa1020930:intron | 20.0% |
| !! | TTAACAAAAATTGATGTATC+TGG | - | chr7_1:45008536-45008555 | Msa1020930:intron | 20.0% |
| !! | ATTCCTAACTAAACAAAATA+AGG | + | chr7_1:45008715-45008734 | None:intergenic | 20.0% |
| !!! | TATTTTGTTTAGTTAGGAAT+TGG | - | chr7_1:45008715-45008734 | Msa1020930:intron | 20.0% |
| !! | TAGATATTCAATTCAACATT+GGG | + | chr7_1:45009108-45009127 | None:intergenic | 20.0% |
| !! | ATAGATATTCAATTCAACAT+TGG | + | chr7_1:45009109-45009128 | None:intergenic | 20.0% |
| !! | CAAACAAATATATAGTAGTT+AGG | + | chr7_1:45009611-45009630 | None:intergenic | 20.0% |
| ! | TTCATCTTCAAGTCATAATA+AGG | + | chr7_1:45007316-45007335 | None:intergenic | 25.0% |
| ! | ACGTATTTGTAAAATGTTGT+AGG | - | chr7_1:45007340-45007359 | Msa1020930:three_prime_UTR | 25.0% |
| ! | CGTATTTGTAAAATGTTGTA+GGG | - | chr7_1:45007341-45007360 | Msa1020930:three_prime_UTR | 25.0% |
| !!! | CTTTCTATTTTTCACTATTC+TGG | - | chr7_1:45007438-45007457 | Msa1020930:three_prime_UTR | 25.0% |
| ! | AAAACATAAAGATAACCAGA+AGG | + | chr7_1:45007552-45007571 | None:intergenic | 25.0% |
| !!! | TGTTTTTAAATGCTTTGTCT+TGG | - | chr7_1:45008427-45008446 | Msa1020930:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | + | chr7_1:45008509-45008528 | None:intergenic | 25.0% |
| ! | GTAATATTATATACTACCTC+CGG | + | chr7_1:45008617-45008636 | None:intergenic | 25.0% |
| !!! | AGTTAGGAATTGGTTTTATT+TGG | - | chr7_1:45008725-45008744 | Msa1020930:intron | 25.0% |
| ! | TAAAATGATATTACAGAAGC+AGG | + | chr7_1:45008820-45008839 | None:intergenic | 25.0% |
| !! | ATATCTATGAATGCTTTTGT+TGG | - | chr7_1:45009121-45009140 | Msa1020930:intron | 25.0% |
| !!! | TAGGTTTTAGTGCTATATTA+TGG | - | chr7_1:45009163-45009182 | Msa1020930:intron | 25.0% |
| !!! | AGGTTTTAGTGCTATATTAT+GGG | - | chr7_1:45009164-45009183 | Msa1020930:intron | 25.0% |
| ! | TTATGAATGACAATTCCAAT+GGG | - | chr7_1:45009691-45009710 | Msa1020930:five_prime_UTR | 25.0% |
| CAATAAATGAAACTTACAGC+AGG | + | chr7_1:45008207-45008226 | None:intergenic | 30.0% | |
| AGATCTACACATGAAAAACA+AGG | + | chr7_1:45008264-45008283 | None:intergenic | 30.0% | |
| TGCGCATAAGTTAAAACAAA+TGG | + | chr7_1:45008352-45008371 | None:intergenic | 30.0% | |
| TCAACCAAAGTTAATGTATG+TGG | + | chr7_1:45008575-45008594 | None:intergenic | 30.0% | |
| !!! | GGACCTTATTTTGTTTAGTT+AGG | - | chr7_1:45008709-45008728 | Msa1020930:intron | 30.0% |
| ATAGACTATTCATGATCTGT+TGG | - | chr7_1:45008758-45008777 | Msa1020930:intron | 30.0% | |
| CATTTACCTGTAAACAAGAA+TGG | + | chr7_1:45008786-45008805 | None:intergenic | 30.0% | |
| ! | CATTCTTGTTTACAGGTAAA+TGG | - | chr7_1:45008784-45008803 | Msa1020930:intron | 30.0% |
| CACTAAAACCTAAAATCACT+CGG | + | chr7_1:45009155-45009174 | None:intergenic | 30.0% | |
| AAGGCATATGAATATGTAAC+TGG | + | chr7_1:45009341-45009360 | None:intergenic | 30.0% | |
| GTTATGAATGACAATTCCAA+TGG | - | chr7_1:45009690-45009709 | Msa1020930:five_prime_UTR | 30.0% | |
| GGATGATGAAAGTTATCTGT+TGG | - | chr7_1:45007524-45007543 | Msa1020930:three_prime_UTR | 35.0% | |
| TAAAAGCTGATCATCTCGTT+CGG | + | chr7_1:45007580-45007599 | None:intergenic | 35.0% | |
| ! | AACGAGATGATCAGCTTTTA+TGG | - | chr7_1:45007580-45007599 | Msa1020930:CDS | 35.0% |
| GCAGAAACAATATCGAAGTT+TGG | - | chr7_1:45007795-45007814 | Msa1020930:CDS | 35.0% | |
| ! | TGTTGGATTTTGTTCATCGA+TGG | - | chr7_1:45007853-45007872 | Msa1020930:intron | 35.0% |
| ! | AATTGCTTCGTTGTTGTTAC+AGG | - | chr7_1:45008013-45008032 | Msa1020930:intron | 35.0% |
| AAAAACAAATGCGAGCATCA+GGG | + | chr7_1:45008166-45008185 | None:intergenic | 35.0% | |
| ACATTACAAAATACTCCCTC+CGG | - | chr7_1:45008487-45008506 | Msa1020930:intron | 35.0% | |
| CAGTCCACATACATTAACTT+TGG | - | chr7_1:45008568-45008587 | Msa1020930:intron | 35.0% | |
| CCAAACTTTCTCTTATAGTC+CGG | - | chr7_1:45008595-45008614 | Msa1020930:intron | 35.0% | |
| ! | TTGGATCCATTCTTGTTTAC+AGG | - | chr7_1:45008777-45008796 | Msa1020930:intron | 35.0% |
| TTTAATGATTTACCAGCACG+AGG | + | chr7_1:45009033-45009052 | None:intergenic | 35.0% | |
| GTGTCTAGATTTGTGAACTT+AGG | + | chr7_1:45009086-45009105 | None:intergenic | 35.0% | |
| AGAGAAAATCAAGTGGAAGA+AGG | + | chr7_1:45009360-45009379 | None:intergenic | 35.0% | |
| TAGCAAGAGAGAAAATCAAG+TGG | + | chr7_1:45009367-45009386 | None:intergenic | 35.0% | |
| ! | CAACTGCTTTGCTATACTTA+TGG | - | chr7_1:45009498-45009517 | Msa1020930:intron | 35.0% |
| ! | CACTATTCTGGCTACTATGA+TGG | - | chr7_1:45007450-45007469 | Msa1020930:three_prime_UTR | 40.0% |
| ! | ATTCTGGCTACTATGATGGT+TGG | - | chr7_1:45007454-45007473 | Msa1020930:three_prime_UTR | 40.0% |
| ! | GATGATCAGCTTTTATGGTG+AGG | - | chr7_1:45007585-45007604 | Msa1020930:CDS | 40.0% |
| CAAAAGGAAGCTAACATGCA+TGG | + | chr7_1:45007668-45007687 | None:intergenic | 40.0% | |
| ! | ACAATATCGAAGTTTGGCTC+TGG | - | chr7_1:45007801-45007820 | Msa1020930:CDS | 40.0% |
| !! | TGTTCAAGTTGTGCTCTTGT+TGG | - | chr7_1:45007836-45007855 | Msa1020930:intron | 40.0% |
| TTCATCGATGGAATGACACA+TGG | - | chr7_1:45007865-45007884 | Msa1020930:intron | 40.0% | |
| TCATCGATGGAATGACACAT+GGG | - | chr7_1:45007866-45007885 | Msa1020930:intron | 40.0% | |
| TTGGATATGATGAGCAGTTC+TGG | - | chr7_1:45007889-45007908 | Msa1020930:intron | 40.0% | |
| TGTTTCACTTGTCTGTTACG+TGG | - | chr7_1:45008053-45008072 | Msa1020930:intron | 40.0% | |
| TTTCATTTCTTCACGCCATC+TGG | - | chr7_1:45008102-45008121 | Msa1020930:CDS | 40.0% | |
| CAAAAACAAATGCGAGCATC+AGG | + | chr7_1:45008167-45008186 | None:intergenic | 40.0% | |
| CTTCATGTGATAGACAACAG+TGG | + | chr7_1:45008289-45008308 | None:intergenic | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | chr7_1:45008505-45008524 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | chr7_1:45008506-45008525 | None:intergenic | 40.0% | |
| CCGGACTATAAGAGAAAGTT+TGG | + | chr7_1:45008598-45008617 | None:intergenic | 40.0% | |
| AACTTTCTCTTATAGTCCGG+AGG | - | chr7_1:45008598-45008617 | Msa1020930:intron | 40.0% | |
| ! | TACTGACAATCTGCCATTTC+TGG | - | chr7_1:45009248-45009267 | Msa1020930:CDS | 40.0% |
| !! | CCATTTCTGGTTATTGTGCA+GGG | - | chr7_1:45009261-45009280 | Msa1020930:CDS | 40.0% |
| TTAGCATCCAATGGAAGCAA+AGG | + | chr7_1:45009290-45009309 | None:intergenic | 40.0% | |
| TTTGCTTCCATTGGATGCTA+AGG | - | chr7_1:45009289-45009308 | Msa1020930:CDS | 40.0% | |
| TCTTCATCCTTAGCATCCAA+TGG | + | chr7_1:45009299-45009318 | None:intergenic | 40.0% | |
| TATTCTGCAATGCTTCTGAC+AGG | - | chr7_1:45009392-45009411 | Msa1020930:intron | 40.0% | |
| !! | GTGGTTTGCTCAATTTCTCA+TGG | - | chr7_1:45009563-45009582 | Msa1020930:CDS | 40.0% |
| ACAATTGAAAACACGCCCAT+TGG | + | chr7_1:45009709-45009728 | None:intergenic | 40.0% | |
| CATCAGTCTCAAACCACTCA+CGG | + | chr7_1:45007393-45007412 | None:intergenic | 45.0% | |
| ! | GCAGTTCTTCGTGTTAGCTT+TGG | - | chr7_1:45007412-45007431 | Msa1020930:three_prime_UTR | 45.0% |
| ! | AGTTATCTGTTGGTGCCTTC+TGG | - | chr7_1:45007534-45007553 | Msa1020930:three_prime_UTR | 45.0% |
| !! | GAGCAGTTCTGGTCAGTTTT+AGG | - | chr7_1:45007900-45007919 | Msa1020930:intron | 45.0% |
| AACACCCGAGAACACAAAAG+TGG | + | chr7_1:45008079-45008098 | None:intergenic | 45.0% | |
| AGCAGGATGCAAAGCTACTA+TGG | + | chr7_1:45008190-45008209 | None:intergenic | 45.0% | |
| TGGCGTGAAGTAACAATTGC+TGG | - | chr7_1:45008688-45008707 | Msa1020930:intron | 45.0% | |
| GTATCTCTGCTATAGTGCAC+TGG | - | chr7_1:45008846-45008865 | Msa1020930:intron | 45.0% | |
| CCATTGCACTCGTAATCTCT+GGG | + | chr7_1:45008880-45008899 | None:intergenic | 45.0% | |
| ACCATTGCACTCGTAATCTC+TGG | + | chr7_1:45008881-45008900 | None:intergenic | 45.0% | |
| !! | TTCCACTGGCTCTCTTACTT+TGG | - | chr7_1:45008924-45008943 | Msa1020930:CDS | 45.0% |
| !! | TCCACTGGCTCTCTTACTTT+GGG | - | chr7_1:45008925-45008944 | Msa1020930:CDS | 45.0% |
| CCTAAAATCACTCGGCTTCA+TGG | + | chr7_1:45009147-45009166 | None:intergenic | 45.0% | |
| ! | CCATGAAGCCGAGTGATTTT+AGG | - | chr7_1:45009144-45009163 | Msa1020930:intron | 45.0% |
| !! | GCCATTTCTGGTTATTGTGC+AGG | - | chr7_1:45009260-45009279 | Msa1020930:CDS | 45.0% |
| CCCTGCACAATAACCAGAAA+TGG | + | chr7_1:45009264-45009283 | None:intergenic | 45.0% | |
| TGTTGGAGAGAGTGGTAAGT+TGG | - | chr7_1:45009427-45009446 | Msa1020930:intron | 45.0% | |
| !! | AGTGGTAAGTTGGTTGACGT+GGG | - | chr7_1:45009437-45009456 | Msa1020930:intron | 45.0% |
| AACCACTTAGAACTCCCTCT+CGG | + | chr7_1:45009549-45009568 | None:intergenic | 45.0% | |
| ! | CTCAATTTCTCATGGCTCTG+AGG | - | chr7_1:45009571-45009590 | Msa1020930:CDS | 45.0% |
| !! | ATTTCTCATGGCTCTGAGGA+AGG | - | chr7_1:45009575-45009594 | Msa1020930:CDS | 45.0% |
| !! | AAATATAAAATATCAAATAA+AGG | + | chr7_1:45007961-45007980 | None:intergenic | 5.0% |
| AACAAACTCCAAGCCGTGAG+TGG | - | chr7_1:45007377-45007396 | Msa1020930:three_prime_UTR | 50.0% | |
| GGTTGGCGTCAAAACTCAGA+AGG | - | chr7_1:45007471-45007490 | Msa1020930:three_prime_UTR | 50.0% | |
| ACTCAGAAGGATCCTCGTGA+TGG | - | chr7_1:45007484-45007503 | Msa1020930:three_prime_UTR | 50.0% | |
| ! | CTCGTGATGGCTTGCATCAT+GGG | - | chr7_1:45007497-45007516 | Msa1020930:three_prime_UTR | 50.0% |
| ! | TCGTGATGGCTTGCATCATG+GGG | - | chr7_1:45007498-45007517 | Msa1020930:three_prime_UTR | 50.0% |
| CGATGGAATGACACATGGGT+TGG | - | chr7_1:45007870-45007889 | Msa1020930:intron | 50.0% | |
| !!! | CGTGGCCACTTTTGTGTTCT+CGG | - | chr7_1:45008071-45008090 | Msa1020930:intron | 50.0% |
| !!! | GTGGCCACTTTTGTGTTCTC+GGG | - | chr7_1:45008072-45008091 | Msa1020930:intron | 50.0% |
| ! | GTTCCACAGTCTTGTCCAGA+TGG | + | chr7_1:45008120-45008139 | None:intergenic | 50.0% |
| CCCAGAGATTACGAGTGCAA+TGG | - | chr7_1:45008877-45008896 | Msa1020930:intron | 50.0% | |
| ! | CACTCCAAAGCTGTTTCCAC+TGG | - | chr7_1:45008910-45008929 | Msa1020930:intron | 50.0% |
| AGAGCCAGTGGAAACAGCTT+TGG | + | chr7_1:45008917-45008936 | None:intergenic | 50.0% | |
| TCCCAAAGTAAGAGAGCCAG+TGG | + | chr7_1:45008929-45008948 | None:intergenic | 50.0% | |
| AGGGAAGCCTTTGCTTCCAT+TGG | - | chr7_1:45009280-45009299 | Msa1020930:CDS | 50.0% | |
| CTGCAATGCTTCTGACAGGT+TGG | - | chr7_1:45009396-45009415 | Msa1020930:intron | 50.0% | |
| !! | ACAGGTTGGTCTACCTCTGT+TGG | - | chr7_1:45009410-45009429 | Msa1020930:intron | 50.0% |
| TCTACCTCTGTTGGAGAGAG+TGG | - | chr7_1:45009419-45009438 | Msa1020930:intron | 50.0% | |
| CTTACCACTCTCTCCAACAG+AGG | + | chr7_1:45009426-45009445 | None:intergenic | 50.0% | |
| !! | GAGTGGTAAGTTGGTTGACG+TGG | - | chr7_1:45009436-45009455 | Msa1020930:intron | 50.0% |
| !! | GTGGTAAGTTGGTTGACGTG+GGG | - | chr7_1:45009438-45009457 | Msa1020930:intron | 50.0% |
| ACAATCCGGACCCAAACTGA+AGG | + | chr7_1:45009467-45009486 | None:intergenic | 50.0% | |
| TTGCCCAGCAAGTGACAATC+CGG | + | chr7_1:45009481-45009500 | None:intergenic | 50.0% | |
| TCCTATCATGTTCCCCGAGA+GGG | - | chr7_1:45009532-45009551 | Msa1020930:CDS | 50.0% | |
| ACCACTTAGAACTCCCTCTC+GGG | + | chr7_1:45009548-45009567 | None:intergenic | 50.0% | |
| GTCTCAAACCACTCACGGCT+TGG | + | chr7_1:45007388-45007407 | None:intergenic | 55.0% | |
| CCATGATGCAAGCCATCACG+AGG | + | chr7_1:45007499-45007518 | None:intergenic | 55.0% | |
| ! | CCTCGTGATGGCTTGCATCA+TGG | - | chr7_1:45007496-45007515 | Msa1020930:three_prime_UTR | 55.0% |
| ! | CGTGATGGCTTGCATCATGG+GGG | - | chr7_1:45007499-45007518 | Msa1020930:three_prime_UTR | 55.0% |
| ACGCCATCTGGACAAGACTG+TGG | - | chr7_1:45008114-45008133 | Msa1020930:CDS | 55.0% | |
| TTACCAGCACGAGGTGAGCT+TGG | + | chr7_1:45009024-45009043 | None:intergenic | 55.0% | |
| !! | GTAAGTTGGTTGACGTGGGG+TGG | - | chr7_1:45009441-45009460 | Msa1020930:intron | 55.0% |
| ! | GGTCCGGATTGTCACTTGCT+GGG | - | chr7_1:45009475-45009494 | Msa1020930:intron | 55.0% |
| CTCCTATCATGTTCCCCGAG+AGG | - | chr7_1:45009531-45009550 | Msa1020930:CDS | 55.0% | |
| TCCCTCTCGGGGAACATGAT+AGG | + | chr7_1:45009536-45009555 | None:intergenic | 55.0% | |
| CCACTTAGAACTCCCTCTCG+GGG | + | chr7_1:45009547-45009566 | None:intergenic | 55.0% | |
| ! | ATGGCTTGCATCATGGGGGC+TGG | - | chr7_1:45007503-45007522 | Msa1020930:three_prime_UTR | 60.0% |
| GTGTATTCTGCCGTGCGTGC+TGG | - | chr7_1:45008973-45008992 | Msa1020930:CDS | 60.0% | |
| GGCAGAAGATCCAGCACGCA+CGG | + | chr7_1:45008986-45009005 | None:intergenic | 60.0% | |
| !! | GCTTGGTGGGGAAAGCACTG+CGG | + | chr7_1:45009007-45009026 | None:intergenic | 60.0% |
| ! | AGCACGAGGTGAGCTTGGTG+GGG | + | chr7_1:45009019-45009038 | None:intergenic | 60.0% |
| CAGCACGAGGTGAGCTTGGT+GGG | + | chr7_1:45009020-45009039 | None:intergenic | 60.0% | |
| ACGTGGGGTGGCCTTCAGTT+TGG | - | chr7_1:45009453-45009472 | Msa1020930:intron | 60.0% | |
| CGTGGGGTGGCCTTCAGTTT+GGG | - | chr7_1:45009454-45009473 | Msa1020930:intron | 60.0% | |
| GGTGGCCTTCAGTTTGGGTC+CGG | - | chr7_1:45009459-45009478 | Msa1020930:intron | 60.0% | |
| ! | GGGTCCGGATTGTCACTTGC+TGG | - | chr7_1:45009474-45009493 | Msa1020930:intron | 60.0% |
| !! | CCCCGAGAGGGAGTTCTAAG+TGG | - | chr7_1:45009544-45009563 | Msa1020930:CDS | 60.0% |
| CCAGCACGAGGTGAGCTTGG+TGG | + | chr7_1:45009021-45009040 | None:intergenic | 65.0% | |
| CCACCAAGCTCACCTCGTGC+TGG | - | chr7_1:45009018-45009037 | Msa1020930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 45007305 | 45009817 | 45007305 | ID=Msa1020930;Name=Msa1020930 |
| chr7_1 | mRNA | 45007305 | 45009817 | 45007305 | ID=Msa1020930-mRNA-1;Parent=Msa1020930;Name=Msa1020930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=161|1|1|1|1|1|5|255|314 |
| chr7_1 | exon | 45007305 | 45007840 | 45007305 | ID=Msa1020930-mRNA-1:exon:8845;Parent=Msa1020930-mRNA-1 |
| chr7_1 | exon | 45008083 | 45008323 | 45008083 | ID=Msa1020930-mRNA-1:exon:8844;Parent=Msa1020930-mRNA-1 |
| chr7_1 | exon | 45008913 | 45009087 | 45008913 | ID=Msa1020930-mRNA-1:exon:8843;Parent=Msa1020930-mRNA-1 |
| chr7_1 | exon | 45009212 | 45009323 | 45009212 | ID=Msa1020930-mRNA-1:exon:8842;Parent=Msa1020930-mRNA-1 |
| chr7_1 | exon | 45009521 | 45009817 | 45009521 | ID=Msa1020930-mRNA-1:exon:8841;Parent=Msa1020930-mRNA-1 |
| chr7_1 | five_prime_UTR | 45009657 | 45009817 | 45009657 | ID=Msa1020930-mRNA-1:five_prime_utr;Parent=Msa1020930-mRNA-1 |
| chr7_1 | CDS | 45009521 | 45009656 | 45009521 | ID=Msa1020930-mRNA-1:cds;Parent=Msa1020930-mRNA-1 |
| chr7_1 | CDS | 45009212 | 45009323 | 45009212 | ID=Msa1020930-mRNA-1:cds;Parent=Msa1020930-mRNA-1 |
| chr7_1 | CDS | 45008913 | 45009087 | 45008913 | ID=Msa1020930-mRNA-1:cds;Parent=Msa1020930-mRNA-1 |
| chr7_1 | CDS | 45008083 | 45008323 | 45008083 | ID=Msa1020930-mRNA-1:cds;Parent=Msa1020930-mRNA-1 |
| chr7_1 | CDS | 45007560 | 45007840 | 45007560 | ID=Msa1020930-mRNA-1:cds;Parent=Msa1020930-mRNA-1 |
| chr7_1 | three_prime_UTR | 45007305 | 45007559 | 45007305 | ID=Msa1020930-mRNA-1:three_prime_utr;Parent=Msa1020930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
