AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0351720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351720 MtrunA17_Chr3g0085521 74.404 1090 186 4 1 1029 1 1058 0.0 1594
Msa0351720 MtrunA17_Chr3g0086741 82.394 869 92 3 1 808 1 869 0.0 1415
Msa0351720 MtrunA17_Chr3g0085751 68.194 1091 252 8 4 1029 1 1061 0.0 1413
Msa0351720 MtrunA17_Chr3g0085091 68.282 1094 257 11 1 1029 1 1069 0.0 1399
Msa0351720 MtrunA17_Chr3g0085171 64.798 1088 282 8 8 1029 2 1054 0.0 1335
Msa0351720 MtrunA17_Chr3g0085131 65.009 1086 285 8 4 1029 5 1055 0.0 1334
Msa0351720 MtrunA17_Chr3g0085111 64.096 1089 297 9 4 1029 5 1062 0.0 1315
Msa0351720 MtrunA17_Chr3g0091011 63.726 1009 254 10 1 945 1 961 0.0 1195
Msa0351720 MtrunA17_Chr3g0085161 68.113 922 212 6 172 1029 24 927 0.0 1194
Msa0351720 MtrunA17_Chr3g0087701 57.703 1097 357 16 1 1029 1 1058 0.0 1112
Msa0351720 MtrunA17_Chr3g0084081 56.640 1107 360 15 1 1027 1 1067 0.0 1095
Msa0351720 MtrunA17_Chr3g0084031 54.365 1111 381 18 1 1027 3 1071 0.0 1068
Msa0351720 MtrunA17_Chr3g0085711 83.570 633 101 1 400 1029 1 633 0.0 1054
Msa0351720 MtrunA17_Chr3g0084051 55.244 1106 377 16 1 1029 1 1065 0.0 1048
Msa0351720 MtrunA17_Chr3g0087581 53.514 1110 410 14 1 1041 1 1073 0.0 1046
Msa0351720 MtrunA17_Chr3g0086221 54.437 1093 394 14 1 1027 1 1055 0.0 1044
Msa0351720 MtrunA17_Chr3g0086161 53.614 1093 407 15 1 1029 1 1057 0.0 1037
Msa0351720 MtrunA17_Chr3g0086621 53.719 1089 406 11 1 1027 1 1053 0.0 1033
Msa0351720 MtrunA17_Chr3g0084061 54.083 1102 401 13 1 1029 1 1070 0.0 1006
Msa0351720 MtrunA17_Chr3g0087541 52.428 1112 406 17 1 1027 1 1074 0.0 984
Msa0351720 MtrunA17_Chr3g0082791 53.956 1049 354 20 1 967 3 1004 0.0 973
Msa0351720 MtrunA17_Chr3g0085501 48.230 1215 392 23 1 1028 1 1165 0.0 934
Msa0351720 MtrunA17_Chr3g0085451 51.364 1100 408 17 1 1028 1 1045 0.0 931
Msa0351720 MtrunA17_Chr3g0085551 63.030 779 196 9 124 838 12 762 0.0 910
Msa0351720 MtrunA17_Chr3g0085801 50.092 1088 393 20 1 1007 1 1019 0.0 904
Msa0351720 MtrunA17_Chr3g0086091 55.581 878 317 11 216 1029 1 869 0.0 879
Msa0351720 MtrunA17_Chr3g0086151 52.723 918 336 11 1 855 1 883 0.0 864
Msa0351720 MtrunA17_Chr3g0086181 52.329 923 333 14 1 856 1 883 0.0 855
Msa0351720 MtrunA17_Chr3g0085651 47.383 1108 446 21 1 1025 1 1054 0.0 846
Msa0351720 MtrunA17_Chr3g0085651 49.834 301 136 5 728 1028 1001 1286 5.16e-71 259
Msa0351720 MtrunA17_Chr3g0085331 52.179 941 320 18 1 850 1 902 0.0 807
Msa0351720 MtrunA17_Chr3g0085331 51.140 307 136 6 738 1041 889 1184 5.01e-71 258
Msa0351720 MtrunA17_Chr7g0221481 53.189 878 312 12 1 808 1 849 0.0 800
Msa0351720 MtrunA17_Chr3g0085561 51.389 936 310 18 1 850 1 877 0.0 787
Msa0351720 MtrunA17_Chr3g0085561 44.068 118 60 1 738 855 864 975 3.46e-16 84.0
Msa0351720 MtrunA17_Chr3g0087731 51.598 876 287 16 216 1029 1 801 0.0 755
Msa0351720 MtrunA17_Chr3g0085471 49.731 929 344 18 1 849 1 886 0.0 744
Msa0351720 MtrunA17_Chr3g0085471 48.288 292 140 3 738 1029 916 1196 2.11e-61 229
Msa0351720 MtrunA17_Chr3g0085701 81.905 420 73 1 613 1029 451 870 0.0 702
Msa0351720 MtrunA17_Chr3g0085701 49.583 480 153 8 1 419 1 452 4.13e-118 387
Msa0351720 MtrunA17_Chr3g0086071 56.656 616 253 6 387 998 39 644 0.0 637
Msa0351720 MtrunA17_Chr8g0352831 37.627 1079 544 21 5 989 6 1049 0.0 566
Msa0351720 MtrunA17_Chr8g0352861 35.546 1190 565 27 5 1029 6 1158 0.0 562
Msa0351720 MtrunA17_Chr1g0169901 35.262 1089 561 26 4 1007 5 1034 4.87e-174 538
Msa0351720 MtrunA17_Chr3g0091081 35.400 1113 538 29 2 1017 3 1031 1.18e-172 540
Msa0351720 MtrunA17_Chr3g0091061 35.637 1114 532 27 2 1018 3 1028 2.37e-170 533
Msa0351720 MtrunA17_Chr3g0090691 35.612 1112 534 30 2 1018 3 1027 1.74e-167 526
Msa0351720 MtrunA17_Chr3g0089871 33.473 1192 585 31 2 1029 3 1150 9.94e-165 519
Msa0351720 MtrunA17_Chr3g0090651 36.737 950 462 20 2 856 3 908 1.07e-164 511
Msa0351720 MtrunA17_Chr3g0085431 52.574 544 184 9 344 856 2 502 1.12e-164 494
Msa0351720 MtrunA17_Chr8g0348931 35.484 1116 535 30 2 1018 3 1032 4.66e-163 513
Msa0351720 MtrunA17_Chr3g0082131 34.222 1163 571 32 3 1028 2 1107 1.32e-162 512
Msa0351720 MtrunA17_Chr3g0087841 33.771 1143 564 29 2 1027 3 1069 1.15e-161 508
Msa0351720 MtrunA17_Chr6g0484551 37.916 902 448 20 2 835 3 860 1.51e-160 496
Msa0351720 MtrunA17_Chr3g0089601 35.609 952 469 21 3 856 2 907 2.18e-160 498
Msa0351720 MtrunA17_Chr4g0025391 35.396 1099 540 33 2 987 3 1044 2.26e-159 505
Msa0351720 MtrunA17_Chr2g0309721 33.190 1160 590 31 2 1029 3 1109 1.54e-157 500
Msa0351720 MtrunA17_Chr3g0089541 33.906 1106 565 28 2 1018 3 1031 1.58e-156 497
Msa0351720 MtrunA17_Chr3g0089781 33.765 1081 537 27 2 972 3 1014 1.90e-155 488
Msa0351720 MtrunA17_Chr3g0089811 34.080 1071 543 29 2 961 3 1021 2.25e-155 494
Msa0351720 MtrunA17_Chr3g0089961 34.911 951 478 21 2 854 3 910 4.55e-155 484
Msa0351720 MtrunA17_Chr3g0084971 33.448 1166 587 32 3 1031 4 1117 2.11e-154 491
Msa0351720 MtrunA17_Chr7g0248531 35.829 935 462 23 4 849 3 888 4.32e-154 481
Msa0351720 MtrunA17_Chr3g0092241 35.127 948 467 21 2 849 3 902 4.64e-153 483
Msa0351720 MtrunA17_Chr3g0089651 34.530 1086 574 30 2 987 3 1051 1.52e-152 486
Msa0351720 MtrunA17_Chr3g0089211 35.593 944 467 21 2 849 50 948 2.42e-152 487
Msa0351720 MtrunA17_Chr3g0089501 35.847 915 443 21 3 819 2 870 4.21e-152 474
Msa0351720 MtrunA17_Chr3g0090141 33.215 1129 558 31 2 989 3 1076 5.65e-152 485
Msa0351720 MtrunA17_Chr3g0090371 33.453 1118 551 28 2 1018 3 1028 1.67e-150 481
Msa0351720 MtrunA17_Chr3g0089421 33.636 1100 566 32 2 989 3 1050 2.51e-149 478
Msa0351720 MtrunA17_Chr1g0164631 37.188 960 462 23 1 859 1 920 4.88e-149 470
Msa0351720 MtrunA17_Chr2g0299151 33.984 1127 590 32 2 1032 3 1071 5.24e-149 476
Msa0351720 MtrunA17_Chr3g0089251 33.959 1066 550 26 2 961 32 1049 5.76e-149 479
Msa0351720 MtrunA17_Chr3g0089991 33.693 1113 539 30 2 1018 3 1012 1.03e-148 476
Msa0351720 MtrunA17_Chr1g0147141 34.839 1085 553 34 1 987 15 1043 2.19e-148 471
Msa0351720 MtrunA17_Chr1g0164581 33.711 1148 573 34 3 1028 2 1083 1.00e-147 473
Msa0351720 MtrunA17_Chr3g0092261 34.286 945 478 22 2 849 48 946 1.47e-147 474
Msa0351720 MtrunA17_Chr3g0089591 31.363 1218 587 34 1 1028 1 1159 2.88e-147 473
Msa0351720 MtrunA17_Chr3g0082351 34.392 945 482 23 1 851 1 901 6.41e-147 468
Msa0351720 MtrunA17_Chr3g0082351 42.857 119 62 2 739 851 865 983 2.49e-16 84.7
Msa0351720 MtrunA17_Chr3g0082311 35.282 941 463 25 1 843 1 893 7.14e-145 463
Msa0351720 MtrunA17_Chr3g0082311 31.636 275 157 14 736 987 851 1117 1.36e-16 85.5
Msa0351720 MtrunA17_Chr2g0282991 33.551 1070 578 22 2 984 3 1026 3.18e-144 464
Msa0351720 MtrunA17_Chr3g0090431 33.398 1033 504 28 160 1027 22 1035 6.59e-144 458
Msa0351720 MtrunA17_Chr3g0089471 30.556 1224 583 30 2 1028 3 1156 1.60e-143 463
Msa0351720 MtrunA17_Chr3g0089761 34.508 965 491 22 2 870 3 922 2.10e-142 459
Msa0351720 MtrunA17_Chr1g0164611 34.372 1059 513 27 2 935 3 1004 1.06e-141 453
Msa0351720 MtrunA17_Chr2g0299121 33.402 973 506 20 6 880 7 935 7.60e-141 450
Msa0351720 MtrunA17_Chr3g0090401 33.212 1096 520 27 2 995 214 1199 5.43e-140 457
Msa0351720 MtrunA17_Chr1g0164391 34.989 946 471 27 1 843 1 905 7.92e-140 451
Msa0351720 MtrunA17_Chr1g0164391 31.674 221 137 8 739 952 877 1090 1.08e-15 82.4
Msa0351720 MtrunA17_Chr3g0113791 31.616 1126 577 26 7 1009 6 1061 1.10e-136 441
Msa0351720 MtrunA17_Chr2g0299091 33.369 941 488 19 38 880 10 909 4.39e-135 434
Msa0351720 MtrunA17_Chr3g0082101 35.199 929 416 23 2 832 3 843 3.69e-134 429
Msa0351720 MtrunA17_Chr3g0082391 36.147 841 432 20 1 765 1 812 1.18e-133 424
Msa0351720 MtrunA17_Chr3g0082321 33.947 869 440 24 1 812 1 792 1.14e-129 413
Msa0351720 MtrunA17_Chr2g0299101 33.147 896 461 19 6 807 7 858 9.79e-128 410
Msa0351720 MtrunA17_Chr5g0446611 34.763 909 464 20 1 819 1 870 2.43e-125 404
Msa0351720 MtrunA17_Chr8g0356251 31.189 1119 610 27 1 987 1 1091 1.42e-124 411
Msa0351720 MtrunA17_Chr3g0085721 52.415 414 127 3 1 381 1 377 1.05e-123 383
Msa0351720 MtrunA17_Chr3g0083721 32.473 1007 501 26 33 933 6 939 2.74e-120 392
Msa0351720 MtrunA17_Chr3g0083641 30.043 1155 626 29 1 1043 1 1085 1.39e-119 396
Msa0351720 MtrunA17_Chr3g0083621 30.079 1137 609 29 10 1017 14 1093 5.31e-119 395
Msa0351720 MtrunA17_Chr3g0083751 30.729 1139 592 31 10 1009 12 1092 2.44e-116 388
Msa0351720 MtrunA17_Chr4g0008461 32.889 976 503 25 177 1028 127 1074 1.11e-113 380
Msa0351720 MtrunA17_Chr3g0083591 31.818 946 500 22 179 992 134 1066 2.75e-110 370
Msa0351720 MtrunA17_Chr4g0020501 30.417 1006 475 26 44 954 5 880 2.50e-109 362
Msa0351720 MtrunA17_Chr3g0113481 32.711 804 415 13 7 735 6 758 5.05e-108 354
Msa0351720 MtrunA17_Chr3g0084811 31.132 954 512 20 10 859 147 1059 1.32e-107 363
Msa0351720 MtrunA17_Chr1g0168901 30.571 929 493 22 1 843 1 863 4.14e-107 356
Msa0351720 MtrunA17_Chr5g0415551 35.166 691 362 13 176 798 27 699 1.56e-105 347
Msa0351720 MtrunA17_Chr3g0080871 31.441 951 513 22 171 1009 149 1072 5.63e-105 356
Msa0351720 MtrunA17_Chr3g0083681 29.785 1118 624 30 1 1017 1 1058 6.90e-105 356
Msa0351720 MtrunA17_Chr3g0113781 34.031 717 372 13 233 871 2 695 7.95e-105 345
Msa0351720 MtrunA17_Chr5g0430721 29.520 1084 562 32 37 1022 74 1053 2.00e-102 346
Msa0351720 MtrunA17_Chr5g0431051 30.405 1036 577 26 5 965 1 967 1.68e-100 340
Msa0351720 MtrunA17_Chr3g0089911 33.239 710 351 17 2 629 3 671 3.70e-100 330
Msa0351720 MtrunA17_Chr7g0244231 29.664 1072 576 32 5 987 1 983 3.92e-98 333
Msa0351720 MtrunA17_Chr5g0430641 30.435 1035 559 31 36 987 32 988 4.58e-97 330
Msa0351720 MtrunA17_Chr3g0091971 29.329 1132 554 34 16 1013 9 1028 4.73e-97 333
Msa0351720 MtrunA17_Chr5g0430291 29.567 1062 582 30 1 965 1 993 6.58e-97 330
Msa0351720 MtrunA17_Chr6g0467961 31.257 915 493 26 1 841 1 853 2.89e-96 325
Msa0351720 MtrunA17_Chr6g0468121 29.768 1122 619 38 1 1032 1 1043 4.24e-96 330
Msa0351720 MtrunA17_Chr5g0430141 29.652 1005 547 24 36 951 32 965 5.19e-96 328
Msa0351720 MtrunA17_Chr6g0468021 30.054 1118 584 34 1 987 1 1051 1.19e-95 328
Msa0351720 MtrunA17_Chr5g0430581 30.060 1008 542 31 38 965 34 958 3.10e-95 325
Msa0351720 MtrunA17_Chr3g0123111 28.653 1054 571 29 34 977 30 1012 7.10e-95 327
Msa0351720 MtrunA17_Chr6g0468271 29.003 1093 636 31 1 1019 1 1027 9.46e-95 327
Msa0351720 MtrunA17_Chr3g0085931 28.724 1121 631 35 1 1019 1 1055 1.48e-94 326
Msa0351720 MtrunA17_Chr3g0091121 35.542 664 335 14 368 993 5 613 1.97e-94 315
Msa0351720 MtrunA17_Chr5g0429951 30.171 1054 559 33 5 965 1 970 2.43e-94 323
Msa0351720 MtrunA17_Chr5g0430511 29.091 1045 593 27 8 965 4 987 3.98e-94 322
Msa0351720 MtrunA17_Chr5g0429961 30.058 1038 573 28 5 965 1 962 1.18e-93 320
Msa0351720 MtrunA17_Chr2g0316291 29.818 1100 578 37 12 962 8 1062 1.14e-92 320
Msa0351720 MtrunA17_Chr5g0415471 30.027 1099 608 39 1 987 1 1050 1.82e-92 320
Msa0351720 MtrunA17_Chr4g0027251 29.640 1056 590 30 36 994 32 1031 3.76e-92 317
Msa0351720 MtrunA17_Chr1g0155321 29.452 1022 560 31 36 964 32 985 2.72e-91 314
Msa0351720 MtrunA17_Chr5g0414311 29.682 1068 593 37 36 989 32 1055 1.76e-90 314
Msa0351720 MtrunA17_Chr5g0430621 29.089 1021 570 26 36 965 32 989 2.00e-90 312
Msa0351720 MtrunA17_Chr6g0470081 27.082 1141 649 27 1 1047 1 1052 4.13e-90 313
Msa0351720 MtrunA17_Chr5g0414181 30.645 992 523 37 36 934 32 951 1.04e-89 309
Msa0351720 MtrunA17_Chr6g0468451 31.189 917 496 32 1 841 1 858 1.27e-89 312
Msa0351720 MtrunA17_Chr5g0430951 31.306 888 475 23 36 843 32 864 1.61e-89 306
Msa0351720 MtrunA17_Chr5g0430441 29.941 1012 549 29 36 965 32 965 2.27e-89 308
Msa0351720 MtrunA17_Chr6g0468151 27.454 1151 589 36 1 988 1 1068 3.61e-88 308
Msa0351720 MtrunA17_Chr3g0087301 29.081 1121 572 38 1 987 1 1032 9.99e-88 306
Msa0351720 MtrunA17_Chr5g0414201 30.294 954 532 32 36 903 32 938 5.09e-87 301
Msa0351720 MtrunA17_Chr6g0470011 28.510 926 528 22 1 850 1 868 1.42e-86 303
Msa0351720 MtrunA17_Chr1g0155991 29.484 1065 562 37 8 964 4 987 2.55e-86 300
Msa0351720 MtrunA17_Chr6g0467911 30.355 817 457 22 1 750 1 772 5.69e-86 294
Msa0351720 MtrunA17_Chr3g0085481 44.149 376 153 7 623 950 1 367 4.83e-85 280
Msa0351720 MtrunA17_Chr6g0470021 29.539 738 433 14 172 843 38 754 7.16e-80 280
Msa0351720 MtrunA17_Chr1g0189511 50.470 319 72 5 329 618 3 264 1.11e-79 261
Msa0351720 MtrunA17_Chr3g0082881 30.425 894 451 34 16 791 7 847 1.16e-79 279
Msa0351720 MtrunA17_Chr3g0091041 35.000 540 247 13 2 474 3 505 1.58e-79 270
Msa0351720 MtrunA17_Chr3g0082891 28.950 867 453 29 16 774 7 818 4.06e-77 271
Msa0351720 MtrunA17_Chr6g0456131 28.977 1056 561 34 34 964 30 1021 3.10e-76 272
Msa0351720 MtrunA17_Chr6g0468101 26.241 1128 593 33 1 987 1 1030 2.35e-75 270
Msa0351720 MtrunA17_Chr3g0089441 36.792 530 275 16 448 950 1 497 4.66e-74 261
Msa0351720 MtrunA17_Chr3g0082811 29.454 842 448 30 16 766 7 793 1.13e-73 260
Msa0351720 MtrunA17_Chr6g0456121 29.733 898 501 27 149 964 110 959 4.06e-73 262
Msa0351720 MtrunA17_Chr3g0082871 30.055 732 380 22 16 664 7 689 2.35e-71 252
Msa0351720 MtrunA17_Chr5g0413811 31.780 708 359 21 240 864 2 668 3.46e-69 244
Msa0351720 MtrunA17_Chr4g0009781 29.723 794 453 24 131 834 103 881 4.47e-69 251
Msa0351720 MtrunA17_Chr3g0089431 32.911 474 230 11 2 405 3 458 1.42e-66 232
Msa0351720 MtrunA17_Chr3g0089931 32.246 552 246 15 2 474 3 505 1.99e-65 230
Msa0351720 MtrunA17_Chr4g0010221 29.597 794 454 24 131 834 103 881 3.25e-64 236
Msa0351720 MtrunA17_Chr3g0082371 35.477 482 246 14 353 801 2 451 1.37e-63 224
Msa0351720 MtrunA17_Chr4g0010261 29.382 793 441 23 48 756 45 802 5.49e-63 233
Msa0351720 MtrunA17_Chr3g0084041 57.216 194 78 2 619 809 1 192 9.69e-63 211
Msa0351720 MtrunA17_Chr3g0085791 57.214 201 84 2 827 1027 4 202 1.26e-62 214
Msa0351720 MtrunA17_Chr5g0417251 32.293 641 343 21 269 841 20 637 2.90e-62 224
Msa0351720 MtrunA17_Chr7g0218941 31.595 671 337 22 19 611 15 641 1.63e-61 228
Msa0351720 MtrunA17_Chr8g0338671 33.789 512 246 12 172 611 41 531 3.80e-61 220
Msa0351720 MtrunA17_Chr8g0338621 31.019 677 334 23 20 612 16 643 4.22e-60 218
Msa0351720 MtrunA17_Chr6g0475491 30.952 672 347 25 20 612 16 649 1.13e-59 220
Msa0351720 MtrunA17_Chr8g0337891 31.381 717 352 28 1 631 1 663 1.71e-59 219
Msa0351720 MtrunA17_Chr6g0471941 29.912 682 356 19 20 622 16 654 2.93e-59 221
Msa0351720 MtrunA17_Chr3g0085421 47.126 261 104 7 75 325 4 240 4.55e-59 203
Msa0351720 MtrunA17_Chr4g0051651 29.907 642 328 19 38 585 56 669 1.47e-58 214
Msa0351720 MtrunA17_Chr7g0248221 27.890 943 462 30 5 849 1 823 4.50e-58 216
Msa0351720 MtrunA17_Chr3g0078361 33.184 446 210 10 215 579 3 441 1.30e-57 205
Msa0351720 MtrunA17_Chr8g0392511 40.782 358 190 8 395 742 1 346 1.77e-57 202
Msa0351720 MtrunA17_Chr1g0189551 29.718 673 345 19 41 633 69 693 4.25e-57 213
Msa0351720 MtrunA17_Chr8g0338391 29.032 682 370 19 20 626 16 658 6.73e-57 213
Msa0351720 MtrunA17_Chr4g0010251 27.912 867 494 29 218 1009 200 1010 1.60e-56 213
Msa0351720 MtrunA17_Chr4g0010201 28.259 959 535 37 131 994 103 1003 1.58e-55 210
Msa0351720 MtrunA17_Chr8g0338261 29.938 648 328 17 22 587 21 624 1.22e-54 206
Msa0351720 MtrunA17_Chr2g0299141 37.092 337 176 5 334 639 73 404 2.35e-54 195
Msa0351720 MtrunA17_Chr7g0257221 29.279 666 336 17 41 611 41 666 3.26e-54 204
Msa0351720 MtrunA17_Chr7g0257201 28.248 662 348 16 41 611 41 666 9.74e-54 203
Msa0351720 MtrunA17_Chr5g0433771 26.982 908 456 25 36 849 36 830 3.47e-53 201
Msa0351720 MtrunA17_Chr8g0338361 32.577 485 240 14 172 587 23 489 1.19e-52 193
Msa0351720 MtrunA17_Chr2g0282891 35.677 384 188 8 305 651 1 362 1.48e-52 188
Msa0351720 MtrunA17_Chr7g0257191 28.070 684 353 17 22 609 25 665 1.61e-52 199
Msa0351720 MtrunA17_Chr5g0417301 29.038 613 312 15 36 597 32 572 1.73e-52 194
Msa0351720 MtrunA17_Chr3g0082381 36.599 347 164 10 1 324 1 314 3.72e-52 186
Msa0351720 MtrunA17_Chr1g0189521 75.652 115 25 1 631 742 1 115 7.18e-52 178
Msa0351720 MtrunA17_Chr1g0169951 28.674 694 354 21 36 632 36 685 1.49e-51 195
Msa0351720 MtrunA17_Chr7g0257541 26.559 930 464 32 22 849 27 839 7.29e-51 194
Msa0351720 MtrunA17_Chr6g0468201 31.324 680 366 30 388 1023 29 651 1.36e-50 191
Msa0351720 MtrunA17_Chr8g0338251 32.554 513 241 15 19 461 15 492 2.24e-50 191
Msa0351720 MtrunA17_Chr8g0346831 26.495 970 508 35 36 867 36 938 3.44e-50 193
Msa0351720 MtrunA17_Chr5g0414231 29.735 491 262 11 32 458 28 499 1.24e-49 184
Msa0351720 MtrunA17_Chr5g0415511 27.690 697 369 20 45 651 41 692 1.80e-49 188
Msa0351720 MtrunA17_Chr8g0355411 28.018 671 355 24 42 631 44 667 2.52e-49 189
Msa0351720 MtrunA17_Chr5g0410301 28.273 863 461 39 178 935 139 948 5.67e-49 189
Msa0351720 MtrunA17_Chr6g0468331 26.286 700 371 20 1 633 1 622 6.08e-49 186
Msa0351720 MtrunA17_Chr5g0410161 27.183 916 491 37 185 1007 305 1137 1.96e-48 188
Msa0351720 MtrunA17_Chr5g0430901 28.249 531 289 12 5 490 1 484 4.90e-47 182
Msa0351720 MtrunA17_Chr5g0430901 35.102 245 145 8 640 879 544 779 1.38e-18 91.7
Msa0351720 MtrunA17_Chr8g0352211 28.882 689 367 17 1 611 1001 1644 4.91e-47 184
Msa0351720 MtrunA17_Chr4g0071021 30.716 433 195 7 41 408 37 429 2.36e-46 173
Msa0351720 MtrunA17_Chr6g0468361 33.333 396 236 9 388 776 29 403 3.89e-46 172
Msa0351720 MtrunA17_Chr6g0470001 31.064 470 290 12 388 848 29 473 9.35e-46 176
Msa0351720 MtrunA17_Chr5g0410261 25.668 935 565 31 177 1019 156 1052 1.06e-45 179
Msa0351720 MtrunA17_Chr3g0091961 33.618 351 195 8 326 648 31 371 3.26e-45 168
Msa0351720 MtrunA17_Chr5g0410481 25.769 1040 617 39 40 989 30 1004 1.24e-44 176
Msa0351720 MtrunA17_Chr5g0410351 26.703 925 514 34 180 1020 153 997 2.58e-44 174
Msa0351720 MtrunA17_Chr5g0415481 31.753 485 286 17 390 852 1 462 2.85e-44 167
Msa0351720 MtrunA17_Chr6g0468111 28.654 520 303 11 159 651 31 509 3.20e-44 168
Msa0351720 MtrunA17_Chr6g0468341 27.273 495 268 9 1 433 1 465 5.75e-44 173
Msa0351720 MtrunA17_Chr6g0468341 30.392 204 126 7 648 841 470 667 2.04e-13 75.1
Msa0351720 MtrunA17_Chr5g0414291 29.877 405 212 8 32 387 28 409 2.82e-42 160
Msa0351720 MtrunA17_Chr8g0351821 27.637 474 247 10 1 409 1 443 2.47e-41 159
Msa0351720 MtrunA17_Chr2g0282981 30.189 424 219 7 2 376 3 398 4.80e-41 157
Msa0351720 MtrunA17_Chr5g0414301 30.357 616 330 28 414 1013 14 546 9.24e-41 159
Msa0351720 MtrunA17_Chr5g0430331 29.199 387 199 6 36 378 32 387 1.46e-40 155
Msa0351720 MtrunA17_Chr5g0430341 32.847 548 309 20 429 965 10 509 1.46e-40 158
Msa0351720 MtrunA17_Chr7g0248431 29.126 515 249 12 36 466 36 518 1.67e-40 158
Msa0351720 MtrunA17_Chr8g0351811 33.249 394 237 10 448 832 1 377 2.70e-39 156
Msa0351720 MtrunA17_Chr8g0392521 28.895 353 168 8 2 332 3 294 4.83e-39 148
Msa0351720 MtrunA17_Chr5g0404741 25.362 899 500 33 49 843 49 880 8.48e-36 147
Msa0351720 MtrunA17_Chr5g0414161 32.908 392 205 14 484 862 36 382 1.75e-35 140
Msa0351720 MtrunA17_Chr4g0071011 32.857 420 258 13 559 965 72 480 1.16e-34 139
Msa0351720 MtrunA17_Chr3g0112511 25.000 804 457 31 167 872 153 908 1.50e-34 143
Msa0351720 MtrunA17_Chr5g0410401 26.408 746 442 27 178 849 17 729 2.54e-34 142
Msa0351720 MtrunA17_Chr7g0257551 31.627 332 148 7 172 425 83 413 3.34e-34 136
Msa0351720 MtrunA17_Chr2g0309151 27.551 490 243 12 240 655 2 453 4.46e-34 137
Msa0351720 MtrunA17_Chr2g0299001 25.492 914 524 35 36 843 32 894 6.58e-34 141
Msa0351720 MtrunA17_Chr2g0308491 36.444 225 108 2 198 387 8 232 7.12e-34 131
Msa0351720 MtrunA17_Chr8g0338861 29.355 620 336 23 332 874 57 651 1.10e-33 139
Msa0351720 MtrunA17_Chr7g0248411 33.808 281 132 6 131 358 41 320 4.96e-33 130
Msa0351720 MtrunA17_Chr4g0037421 25.429 700 395 20 176 779 196 864 7.22e-33 137
Msa0351720 MtrunA17_Chr3g0080751 24.252 969 542 44 1 849 1 897 3.90e-32 135
Msa0351720 MtrunA17_Chr6g0469991 25.824 364 205 4 34 358 30 367 7.13e-32 128
Msa0351720 MtrunA17_Chr1g0189501 58.261 115 29 2 178 292 3 98 8.99e-32 120
Msa0351720 MtrunA17_Chr3g0081361 28.598 535 270 19 159 609 159 665 1.03e-31 134
Msa0351720 MtrunA17_Chr5g0410021 25.488 769 437 33 173 845 150 878 8.61e-31 131
Msa0351720 MtrunA17_Chr5g0415491 43.114 167 85 4 159 322 8 167 1.00e-30 120
Msa0351720 MtrunA17_Chr3g0081211 24.153 679 372 24 25 609 30 659 2.61e-30 129
Msa0351720 MtrunA17_Chr3g0101321 25.684 658 370 23 176 753 165 783 7.30e-30 128
Msa0351720 MtrunA17_Chr3g0092291 41.892 222 120 5 400 620 1 214 1.03e-29 122
Msa0351720 MtrunA17_Chr5g0416571 28.313 332 178 8 1 324 1 280 1.99e-29 120
Msa0351720 MtrunA17_Chr1g0151481 22.472 712 402 23 1 609 1 665 2.11e-29 126
Msa0351720 MtrunA17_Chr2g0299131 32.579 221 106 3 178 358 2 219 2.35e-29 117
Msa0351720 MtrunA17_Chr3g0080601 23.330 973 558 37 1 856 1 902 2.38e-29 126
Msa0351720 MtrunA17_Chr6g0468401 27.134 328 201 6 1 321 1 297 4.56e-29 119
Msa0351720 MtrunA17_Chr3g0081341 26.456 824 447 36 159 876 213 983 4.61e-29 125
Msa0351720 MtrunA17_Chr5g0409971 25.032 771 437 34 173 845 154 881 9.17e-29 124
Msa0351720 MtrunA17_Chr3g0100831 23.856 918 538 39 42 861 38 892 1.43e-28 124
Msa0351720 MtrunA17_Chr3g0080791 23.935 798 431 30 10 689 10 749 2.91e-28 123
Msa0351720 MtrunA17_Chr3g0081391 24.742 970 531 45 32 874 28 925 5.40e-28 122
Msa0351720 MtrunA17_Chr5g0409991 24.147 762 451 29 173 845 153 876 8.08e-28 121
Msa0351720 MtrunA17_Chr3g0080771 24.217 958 536 41 10 849 10 895 1.12e-27 121
Msa0351720 MtrunA17_Chr3g0078351 45.806 155 75 4 707 852 30 184 2.84e-27 116
Msa0351720 MtrunA17_Chr3g0089941 39.130 184 95 4 679 849 11 190 4.73e-27 110
Msa0351720 MtrunA17_Chr7g0219851 24.544 933 520 33 36 843 34 907 7.22e-27 118
Msa0351720 MtrunA17_Chr7g0255761 30.548 347 148 7 171 482 36 324 1.11e-26 112
Msa0351720 MtrunA17_Chr1g0189351 24.588 667 381 23 172 744 162 800 2.12e-26 117
Msa0351720 MtrunA17_Chr3g0100851 23.399 765 434 32 167 842 52 753 6.10e-26 115
Msa0351720 MtrunA17_Chr5g0410001 23.169 915 517 33 42 845 37 876 7.14e-26 115
Msa0351720 MtrunA17_Chr3g0101231 23.778 757 450 28 176 844 179 896 9.45e-26 115
Msa0351720 MtrunA17_Chr3g0094301 24.773 662 366 26 42 609 38 661 1.16e-25 114
Msa0351720 MtrunA17_Chr7g0229761 24.773 662 366 26 42 609 38 661 1.16e-25 114
Msa0351720 MtrunA17_Chr3g0101271 22.454 766 463 26 176 856 147 866 8.83e-25 111
Msa0351720 MtrunA17_Chr3g0085621 58.252 103 41 1 929 1029 83 185 2.13e-24 104
Msa0351720 MtrunA17_Chr3g0085621 63.514 74 22 2 972 1041 4 76 1.50e-17 84.3
Msa0351720 MtrunA17_Chr3g0100961 22.595 925 517 38 42 848 38 881 2.28e-24 110
Msa0351720 MtrunA17_Chr3g0101331 22.294 924 545 35 42 849 38 904 3.23e-24 110
Msa0351720 MtrunA17_Chr3g0101241 23.029 647 386 21 176 744 147 759 4.07e-24 109
Msa0351720 MtrunA17_Chr3g0080731 23.505 970 534 42 10 845 10 905 5.02e-24 109
Msa0351720 MtrunA17_Chr3g0089921 33.700 273 156 7 711 961 2 271 7.30e-24 107
Msa0351720 MtrunA17_Chr8g0338681 32.510 243 102 6 240 421 2 243 8.37e-24 101
Msa0351720 MtrunA17_Chr7g0255751 40.642 187 107 4 533 715 34 220 1.01e-23 100
Msa0351720 MtrunA17_Chr3g0100971 21.985 796 450 28 1 687 1 734 1.03e-23 107
Msa0351720 MtrunA17_Chr5g0410031 23.958 576 320 20 173 655 155 705 1.52e-23 107
Msa0351720 MtrunA17_Chr4g0010491 31.438 299 151 10 131 383 103 393 1.58e-23 105
Msa0351720 MtrunA17_Chr3g0100681 24.351 616 332 26 207 731 10 582 1.59e-23 106
Msa0351720 MtrunA17_Chr3g0080631 24.031 774 434 34 1 689 1 705 1.64e-23 107
Msa0351720 MtrunA17_Chr3g0080741 24.138 783 448 31 167 851 166 900 1.96e-23 107
Msa0351720 MtrunA17_Chr3g0101181 23.468 669 385 23 170 744 171 806 2.92e-23 107
Msa0351720 MtrunA17_Chr2g0308471 47.059 119 57 2 742 854 1 119 5.97e-23 95.9
Msa0351720 MtrunA17_Chr3g0100801 23.276 696 399 28 148 765 107 745 1.54e-22 104
Msa0351720 MtrunA17_Chr6g0468141 29.614 233 113 3 172 373 51 263 3.30e-22 97.8
Msa0351720 MtrunA17_Chr3g0101221 24.600 687 386 25 170 760 166 816 4.06e-22 103
Msa0351720 MtrunA17_Chr3g0101251 23.184 647 367 24 170 744 163 751 1.10e-21 101
Msa0351720 MtrunA17_Chr3g0081371 25.637 667 368 27 160 734 160 790 1.15e-21 101
Msa0351720 MtrunA17_Chr3g0081191 24.176 819 439 36 32 734 28 780 1.22e-21 101
Msa0351720 MtrunA17_Chr3g0081181 24.074 810 462 30 36 749 32 784 3.58e-21 100
Msa0351720 MtrunA17_Chr3g0100761 22.750 611 347 20 167 687 119 694 5.41e-21 99.0
Msa0351720 MtrunA17_Chr5g0414171 24.062 453 246 13 35 452 31 420 1.13e-20 96.3
Msa0351720 MtrunA17_Chr3g0085671 55.172 87 37 1 1 85 1 87 8.64e-20 85.1
Msa0351720 MtrunA17_Chr3g0085341 55.682 88 35 2 1 85 1 87 9.53e-20 84.7
Msa0351720 MtrunA17_Chr1g0197241 25.065 770 447 33 175 845 793 1531 3.24e-19 94.4
Msa0351720 MtrunA17_Chr3g0101011 23.460 682 367 29 170 744 174 807 1.71e-18 91.7
Msa0351720 MtrunA17_Chr6g0468191 26.027 292 180 7 1 287 1 261 2.61e-18 86.3
Msa0351720 MtrunA17_Chr4g0005591 25.912 548 269 23 183 632 256 764 9.25e-18 89.4
Msa0351720 MtrunA17_Chr4g0005871 24.444 585 308 24 149 632 270 821 1.04e-17 89.0
Msa0351720 MtrunA17_Chr6g0468251 28.155 412 228 18 633 1019 4 372 3.43e-17 85.9
Msa0351720 MtrunA17_Chr3g0101201 28.279 244 130 7 170 373 169 407 3.83e-17 87.0
Msa0351720 MtrunA17_Chr3g0101211 28.708 209 107 5 215 386 3 206 1.98e-16 82.8
Msa0351720 MtrunA17_Chr3g0100731 23.716 662 368 27 271 844 23 635 2.57e-16 84.0
Msa0351720 MtrunA17_Chr6g0454821 24.429 569 329 23 168 654 211 760 7.38e-16 83.2
Msa0351720 MtrunA17_Chr8g0370511 24.501 551 321 21 142 632 133 648 1.02e-15 82.4
Msa0351720 MtrunA17_Chr1g0189271 24.026 308 156 7 172 406 2 304 1.52e-15 79.3
Msa0351720 MtrunA17_Chr3g0090491 41.509 106 53 2 739 835 1 106 3.13e-15 73.2
Msa0351720 MtrunA17_Chr4g0009171 24.131 518 274 17 205 632 930 1418 2.40e-14 78.2
Msa0351720 MtrunA17_Chr2g0313541 23.141 955 519 40 36 877 41 893 3.05e-14 77.8
Msa0351720 MtrunA17_Chr4g0005851 24.368 554 301 20 168 632 201 725 4.76e-14 77.0
Msa0351720 MtrunA17_Chr3g0085121 65.385 52 18 0 4 55 5 56 5.61e-14 67.4
Msa0351720 MtrunA17_Chr8g0339031 23.541 497 297 22 183 632 198 658 5.77e-14 77.0
Msa0351720 MtrunA17_Chr4g0005891 24.188 554 302 20 168 632 212 736 8.31e-14 76.3
Msa0351720 MtrunA17_Chr2g0313591 22.440 1123 647 45 36 1009 41 1088 8.55e-14 76.6
Msa0351720 MtrunA17_Chr6g0470061 26.872 227 131 5 1 222 1 197 1.38e-13 70.9
Msa0351720 MtrunA17_Chr4g0020391 28.947 190 109 5 7 189 6 176 1.59e-13 70.9
Msa0351720 MtrunA17_Chr3g0080651 24.667 450 261 16 331 734 283 700 1.80e-13 75.1
Msa0351720 MtrunA17_Chr6g0455211 24.051 553 322 22 183 654 229 764 1.86e-13 75.1
Msa0351720 MtrunA17_Chr7g0248121 24.227 809 464 35 168 882 183 936 2.70e-13 74.7
Msa0351720 MtrunA17_Chr3g0085731 23.142 471 289 16 205 632 222 662 3.07e-13 74.3
Msa0351720 MtrunA17_Chr3g0082401 26.316 323 155 9 755 1009 68 375 6.61e-13 72.8
Msa0351720 MtrunA17_Chr7g0257261 24.670 227 135 5 35 248 35 238 6.81e-13 70.5
Msa0351720 MtrunA17_Chr6g0454831 24.000 525 292 20 168 633 172 648 8.83e-13 72.8
Msa0351720 MtrunA17_Chr3g0100781 22.112 303 190 10 42 323 38 315 1.09e-12 71.2
Msa0351720 MtrunA17_Chr8g0338881 22.470 494 306 18 183 632 217 677 1.93e-12 72.0
Msa0351720 MtrunA17_Chr6g0468381 26.852 432 220 18 640 987 67 486 2.50e-12 70.9
Msa0351720 MtrunA17_Chr5g0414221 40.230 87 51 1 548 633 60 146 2.76e-12 65.5
Msa0351720 MtrunA17_Chr5g0413821 27.103 214 118 7 32 231 28 217 3.43e-12 67.4
Msa0351720 MtrunA17_Chr8g0392501 31.928 166 92 4 762 909 1 163 3.70e-12 67.8
Msa0351720 MtrunA17_Chr2g0296461 29.231 195 95 6 215 371 3 192 8.17e-12 66.6
Msa0351720 MtrunA17_Chr6g0454971 24.953 533 294 23 183 632 227 736 1.35e-11 68.9
Msa0351720 MtrunA17_Chr6g0478841 23.866 507 282 20 198 631 201 676 1.77e-11 68.6
Msa0351720 MtrunA17_Chr3g0100701 23.108 502 300 20 395 877 286 720 2.55e-11 68.2
Msa0351720 MtrunA17_Chr7g0257251 31.343 134 64 3 328 433 33 166 3.12e-11 63.5
Msa0351720 MtrunA17_Chr4g0009351 28.689 244 130 8 166 372 82 318 3.63e-11 66.6
Msa0351720 MtrunA17_Chr6g0454901 28.767 219 114 7 191 372 4 217 4.73e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351720 AT3G14470.1 33.893 953 479 20 1 846 1 909 7.00e-150 474
Msa0351720 AT3G14470.2 33.893 953 479 20 1 846 1 909 7.00e-150 474
Msa0351720 AT3G14460.1 32.227 934 506 20 5 846 1 899 3.20e-129 427
Msa0351720 AT3G14460.1 33.190 232 138 9 811 1029 1113 1340 1.01e-12 73.6
Msa0351720 AT3G50950.2 25.630 913 513 39 1 829 1 831 2.08e-42 168
Msa0351720 AT3G50950.1 25.630 913 513 39 1 829 1 831 2.08e-42 168
Msa0351720 AT3G07040.1 25.049 507 259 12 207 635 195 658 1.10e-36 150
Msa0351720 AT5G43470.3 24.200 938 540 34 38 868 34 907 1.39e-29 127
Msa0351720 AT5G43470.2 24.200 938 540 34 38 868 34 907 1.39e-29 127
Msa0351720 AT5G43470.4 24.200 938 540 34 38 868 34 907 1.39e-29 127
Msa0351720 AT5G43470.1 24.200 938 540 34 38 868 34 907 1.39e-29 127
Msa0351720 AT1G58400.3 24.784 924 502 38 37 845 33 878 1.34e-28 124
Msa0351720 AT1G58400.2 24.784 924 502 38 37 845 33 878 1.34e-28 124
Msa0351720 AT1G58400.1 24.863 913 505 38 37 845 33 868 1.43e-27 121
Msa0351720 AT5G48620.6 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT5G48620.1 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT5G48620.4 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT5G48620.2 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT5G48620.3 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT5G48620.5 24.920 943 527 39 38 868 34 907 1.20e-26 118
Msa0351720 AT1G50180.1 24.317 695 339 19 36 639 32 630 3.18e-26 116
Msa0351720 AT5G35450.2 23.548 930 545 34 38 868 34 896 1.13e-25 115
Msa0351720 AT5G35450.1 23.548 930 545 34 38 868 34 896 1.13e-25 115
Msa0351720 AT1G59124.2 23.051 885 545 29 37 837 33 865 9.10e-25 112
Msa0351720 AT1G58807.1 23.051 885 545 29 37 837 33 865 9.10e-25 112
Msa0351720 AT1G58390.1 23.608 898 529 31 42 844 38 873 3.06e-24 110
Msa0351720 AT1G58390.2 23.608 898 529 31 42 844 38 873 3.06e-24 110
Msa0351720 AT1G53350.1 23.179 906 529 34 38 843 34 872 1.51e-22 105
Msa0351720 AT1G59124.1 22.696 868 534 30 42 824 38 853 7.14e-21 99.4
Msa0351720 AT1G58807.2 22.696 868 534 30 42 824 38 853 7.14e-21 99.4
Msa0351720 AT3G46710.1 28.195 493 244 21 198 610 177 639 1.10e-20 99.0
Msa0351720 AT1G58602.2 23.113 1060 614 44 37 987 33 1000 1.10e-20 99.4
Msa0351720 AT1G58602.1 23.113 1060 614 44 37 987 33 1000 1.10e-20 99.4
Msa0351720 AT1G59218.1 25.789 380 214 11 37 372 33 388 4.61e-19 94.0
Msa0351720 AT1G59218.2 25.789 380 214 11 37 372 33 388 4.61e-19 94.0
Msa0351720 AT1G59218.3 25.789 380 214 11 37 372 33 388 4.61e-19 94.0
Msa0351720 AT1G58848.1 25.789 380 214 11 37 372 33 388 4.61e-19 94.0
Msa0351720 AT1G58848.2 25.789 380 214 11 37 372 33 388 4.61e-19 94.0
Msa0351720 AT3G46730.1 26.471 544 270 23 159 609 139 645 6.51e-19 93.2
Msa0351720 AT1G59780.1 23.007 878 491 37 49 828 50 840 2.92e-18 91.3
Msa0351720 AT1G12210.3 24.955 557 303 22 140 614 78 601 7.18e-18 89.7
Msa0351720 AT1G12210.2 24.955 557 303 22 140 614 78 601 7.18e-18 89.7
Msa0351720 AT1G12210.1 24.955 557 303 22 140 614 120 643 9.01e-18 89.4
Msa0351720 AT3G46530.1 25.290 431 237 15 1 385 9 400 1.15e-17 89.0
Msa0351720 AT1G62630.1 24.187 707 385 27 218 828 185 836 1.37e-16 85.9
Msa0351720 AT5G51630.1 22.767 694 394 27 205 796 206 859 1.65e-16 85.5
Msa0351720 AT5G51630.2 22.767 694 394 27 205 796 142 795 1.66e-16 85.5
Msa0351720 AT5G51630.4 22.767 694 394 27 205 796 142 795 1.87e-16 85.5
Msa0351720 AT5G51630.6 22.767 694 394 27 205 796 142 795 1.87e-16 85.5
Msa0351720 AT5G51630.5 22.622 694 395 27 205 796 142 795 1.92e-15 82.0
Msa0351720 AT1G69550.1 30.997 371 211 16 542 883 868 1222 2.21e-15 82.0
Msa0351720 AT1G69550.1 23.391 932 535 42 165 983 238 1103 5.30e-12 70.9
Msa0351720 AT1G63360.1 24.040 703 389 28 218 828 185 834 2.22e-15 81.6
Msa0351720 AT1G63360.2 24.040 703 389 28 218 828 150 799 3.01e-15 81.3
Msa0351720 AT1G61180.2 23.760 484 253 21 171 573 149 597 7.98e-15 80.1
Msa0351720 AT1G61180.1 23.760 484 253 21 171 573 149 597 1.21e-14 79.3
Msa0351720 AT1G59780.2 24.658 438 207 18 49 404 45 441 1.64e-13 75.9
Msa0351720 AT1G12290.1 23.480 477 254 17 178 570 153 602 2.07e-13 75.5
Msa0351720 AT1G12290.4 23.480 477 254 17 178 570 111 560 2.12e-13 75.1
Msa0351720 AT1G12290.3 23.480 477 254 17 178 570 111 560 2.12e-13 75.1
Msa0351720 AT1G12290.2 23.480 477 254 17 178 570 111 560 2.12e-13 75.1
Msa0351720 AT1G61300.2 23.395 483 231 19 171 573 38 461 3.98e-13 74.3

Find 229 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAGAAGCTTTCCATTTC+AGG 0.079361 3_1:-18952937 Msa0351720:CDS
CAAGGAAGGCTTCAAATTTC+AGG 0.128089 3_1:-18953258 Msa0351720:CDS
AGATCATATTCTTAAAATTA+AGG 0.208903 3_1:-18953736 Msa0351720:CDS
AATCAGTAACTATGCCATTA+TGG 0.211451 3_1:-18953923 Msa0351720:CDS
ATTATAGGTACAATGATTTC+TGG 0.216454 3_1:-18952898 Msa0351720:CDS
AAAAGTTGTTATGCCATATT+TGG 0.224137 3_1:-18954939 Msa0351720:CDS
CATCACATCTCTTTAGTTCT+AGG 0.226672 3_1:+18952638 None:intergenic
TGATGTTGCGGCAACAAATT+TGG 0.242578 3_1:-18953211 Msa0351720:CDS
AGTAGTGGTGATTGTGAAAT+TGG 0.253750 3_1:-18954999 Msa0351720:CDS
AACTGAATGGATTAAAATAT+TGG 0.263729 3_1:-18954202 Msa0351720:CDS
TTACAATCCCCAAGCCAATT+TGG 0.267571 3_1:+18953030 None:intergenic
GTTAGAACAATGTTTCAAAT+TGG 0.272791 3_1:-18953463 Msa0351720:CDS
CCGTTTAGCCATGGATCTTC+TGG 0.281268 3_1:-18954474 Msa0351720:CDS
TCTCTCGAAGCCATCAATTT+AGG 0.285245 3_1:+18952268 None:intergenic
CAAATGCGACGCGTCCGTTT+AGG 0.285621 3_1:+18953795 None:intergenic
TTGCCGATCAACTCAAGATT+TGG 0.286580 3_1:+18954303 None:intergenic
CCTGCCTCGGTATTCTTTGA+TGG 0.308789 3_1:+18953059 None:intergenic
TTAAGCAAGGATTTGAAGAT+AGG 0.311116 3_1:-18955091 Msa0351720:CDS
GAGGCAGGAGCTTTCCAAAT+TGG 0.314660 3_1:-18953044 Msa0351720:CDS
TTGGAAGTTGAAGACTTCTT+TGG 0.321789 3_1:-18952502 Msa0351720:CDS
TTCAAGACTAAAATATTTGC+AGG 0.333596 3_1:-18953631 Msa0351720:CDS
AAGCTTCGCATCTTGCCTTT+TGG 0.333849 3_1:+18955128 None:intergenic
ATACAGCATACAAATGGAAT+TGG 0.334401 3_1:+18953503 None:intergenic
ACTCGAGATTTAATAGTTGA+TGG 0.334936 3_1:+18952151 None:intergenic
TTAGTATCTCTAGAATTGTT+AGG 0.335994 3_1:-18953006 Msa0351720:CDS
TGCTGATCAAAAGGATAGAT+TGG 0.339198 3_1:-18955036 Msa0351720:CDS
AAATGCGACGCGTCCGTTTA+GGG 0.341069 3_1:+18953796 None:intergenic
CAAGCCAATTCTTCACGTTT+CGG 0.344624 3_1:+18955216 None:intergenic
GAATTGAAGCCTGCAATTCT+TGG 0.344701 3_1:+18952683 None:intergenic
TATTGATTGCCAAGAATTGC+AGG 0.349421 3_1:-18952692 Msa0351720:CDS
ACCTTCATTACTACCAAATA+TGG 0.349450 3_1:+18954926 None:intergenic
AACACATCTCTCTGTCTTAG+AGG 0.350010 3_1:-18953115 Msa0351720:CDS
GAAGAGGACCATTGTAGATT+TGG 0.352168 3_1:+18952478 None:intergenic
GATCATATTCTTAAAATTAA+GGG 0.354503 3_1:-18953735 Msa0351720:CDS
AGCCTCACGAGGTTTCTATT+TGG 0.361366 3_1:+18953084 None:intergenic
ATCAGTATAATGAGTGTGAT+TGG 0.363324 3_1:-18954771 Msa0351720:CDS
ATTTAGGACATCTTTCTATT+CGG 0.366469 3_1:+18952284 None:intergenic
GGAGCTTTCCAAATTGGCTT+GGG 0.374150 3_1:-18953038 Msa0351720:CDS
ACTGCCCAAGTGGTGGTAAC+TGG 0.375795 3_1:+18952968 None:intergenic
GATACTACCAACTGCACCTT+TGG 0.379704 3_1:-18954889 Msa0351720:CDS
TTGCAGGTGTTGTCCCTCTC+TGG 0.380138 3_1:-18953615 Msa0351720:CDS
TATTCGGAGGCTGCATAGAT+TGG 0.384157 3_1:+18952300 None:intergenic
CATTTGGTGCTGCCTTGATT+TGG 0.384593 3_1:-18953778 Msa0351720:CDS
AACACCGAAACGTGAAGAAT+TGG 0.387372 3_1:-18955220 Msa0351720:CDS
ACTGGATGATGCAGATATAA+AGG 0.390128 3_1:-18955249 Msa0351720:CDS
TATTCCATCGCAGCCTGAAA+TGG 0.390580 3_1:+18952924 None:intergenic
CCTTTAGCTCTAGAAACATT+GGG 0.390920 3_1:-18954252 Msa0351720:CDS
GCAATTTGAACTTAAAGCTT+GGG 0.391880 3_1:-18954694 Msa0351720:CDS
GAGCTTGGTAGACCCTCTTC+TGG 0.401871 3_1:+18952075 None:intergenic
AGAAAGATGTCCTAAATTGA+TGG 0.404565 3_1:-18952278 Msa0351720:CDS
AAAGTTTCAAGGGATCTAAA+TGG 0.404579 3_1:+18952856 None:intergenic
CCCAATGTTTCTAGAGCTAA+AGG 0.407767 3_1:+18954252 None:intergenic
ATCAGTAACTATGCCATTAT+GGG 0.408672 3_1:-18953922 Msa0351720:CDS
ATCTCACCCGAGCAATTCTC+AGG 0.409252 3_1:-18954641 Msa0351720:CDS
AGACAAAAGTGAAGAAGAGT+TGG 0.413939 3_1:-18953991 Msa0351720:CDS
AAGGTGCAGTTGGTAGTATC+CGG 0.415801 3_1:+18954892 None:intergenic
CTAAACGGACGCGTCGCATT+TGG 0.417077 3_1:-18953794 Msa0351720:CDS
AAGGAAGGCTTCAAATTTCA+GGG 0.419487 3_1:-18953257 Msa0351720:CDS
AGCAATTTGAACTTAAAGCT+TGG 0.421055 3_1:-18954695 Msa0351720:CDS
ATGGCATAGTTACTGATTGT+TGG 0.425302 3_1:+18953928 None:intergenic
TGCGATGGAATAGAGATTAT+AGG 0.427092 3_1:-18952913 Msa0351720:CDS
GTGGATGAATCTGCGATATA+TGG 0.427172 3_1:-18954867 Msa0351720:CDS
TGAAGGCTTGCTAAAGTATC+GGG 0.430040 3_1:-18954018 Msa0351720:CDS
AAGGGCAGTTTATTATTCAT+AGG 0.431783 3_1:+18952112 None:intergenic
CAAATTATACAGCATACAAA+TGG 0.434498 3_1:+18953497 None:intergenic
GAGATCATGGCAGGGGTTGT+TGG 0.435968 3_1:-18955398 None:intergenic
GTCACTGATATTATCAGCCT+TGG 0.437355 3_1:+18952660 None:intergenic
GCCATATTTGGTAGTAATGA+AGG 0.437441 3_1:-18954927 Msa0351720:CDS
GTCTCTGTTGCAATTGTCGT+TGG 0.439032 3_1:+18954574 None:intergenic
TTTGAAGCCTTCCTTGAAGA+TGG 0.439270 3_1:+18953265 None:intergenic
GGGTCATCCTTTGTGGATCT+CGG 0.440869 3_1:-18952579 Msa0351720:CDS
AATTGCCATCTAGCTTGAAA+AGG 0.441605 3_1:-18952600 Msa0351720:CDS
GCAGTTTATTATTCATAGGT+TGG 0.444417 3_1:+18952116 None:intergenic
AGAGTGAGTTAATCAAGCTT+TGG 0.450907 3_1:-18954046 Msa0351720:CDS
TTGAAAAGGGTCATCCTTTG+TGG 0.455748 3_1:-18952586 Msa0351720:CDS
CTTTCCATTTCAGGCTGCGA+TGG 0.457115 3_1:-18952928 Msa0351720:CDS
GCGGAACTCAACCATCTTCA+AGG 0.458169 3_1:-18953276 Msa0351720:CDS
AAGAAGGAAGGTGTTGAGGC+AGG 0.458634 3_1:+18952731 None:intergenic
AGGAGCTTTCCAAATTGGCT+TGG 0.460362 3_1:-18953039 Msa0351720:CDS
TACAAAGCTCTTGAAGCAAA+GGG 0.462527 3_1:+18952782 None:intergenic
ACCTTTAGCTCTAGAAACAT+TGG 0.463826 3_1:-18954253 Msa0351720:CDS
TGCTGCCTTGATTTGGAAGA+TGG 0.464001 3_1:-18953771 Msa0351720:CDS
CCAGAAGATCCATGGCTAAA+CGG 0.465929 3_1:+18954474 None:intergenic
AGAGTTTCTTGCTGATCAAA+AGG 0.466401 3_1:-18955045 Msa0351720:CDS
TATCACCATCTTCCAAATCA+AGG 0.468318 3_1:+18953766 None:intergenic
CGATTCTATCAATCAAGTAC+TGG 0.468545 3_1:-18955267 Msa0351720:CDS
ATTGTTTCAGAGAATTGAGT+TGG 0.474937 3_1:+18952230 None:intergenic
CTCAGAATTGAGATCATGGC+AGG 0.476226 3_1:-18955407 None:intergenic
ACTACCAACTGCACCTTTGG+TGG 0.476519 3_1:-18954886 Msa0351720:CDS
TTTGTTGCCGCAACATCAGC+GGG 0.481527 3_1:+18953216 None:intergenic
AGAGTTCCGCTTACTAATAG+AGG 0.481962 3_1:-18953838 Msa0351720:CDS
CAGTCTGATGGTAGAAGCGC+AGG 0.483795 3_1:-18953706 Msa0351720:CDS
TGTTCCCAGTTACCACCACT+TGG 0.484568 3_1:-18952973 Msa0351720:CDS
GACAAAAGTGAAGAAGAGTT+GGG 0.485917 3_1:-18953990 Msa0351720:CDS
AAGGCTTCAAATTTCAGGGT+TGG 0.487958 3_1:-18953253 Msa0351720:CDS
GTGAACGCGTGCAGTGCAAA+AGG 0.490929 3_1:+18952391 None:intergenic
TTGCAATCTCAGTGTGAGAA+AGG 0.492158 3_1:+18953532 None:intergenic
TACAGCATACAAATGGAATT+GGG 0.492611 3_1:+18953504 None:intergenic
CTGAAGGCTTGCTAAAGTAT+CGG 0.494058 3_1:-18954019 Msa0351720:CDS
TGGATTTGACATTAAACAGT+TGG 0.494253 3_1:-18953298 Msa0351720:CDS
ATACAAAGCTCTTGAAGCAA+AGG 0.494672 3_1:+18952781 None:intergenic
TTATACTGATTATGCGTACA+AGG 0.496527 3_1:+18954784 None:intergenic
GCTACTGATGCACGACCAAA+AGG 0.498017 3_1:-18955143 Msa0351720:CDS
AGAAAATAGTAGAAAAGTGC+GGG 0.498902 3_1:-18954281 Msa0351720:CDS
AAATCTACAATGGTCCTCTT+CGG 0.499115 3_1:-18952476 Msa0351720:CDS
GCTGATCAAAAGGATAGATT+GGG 0.499416 3_1:-18955035 Msa0351720:CDS
ATATGATGAATGGAGAGAAA+TGG 0.499990 3_1:-18953154 Msa0351720:CDS
GCTCAAATCGCAAAGTTTCA+AGG 0.501024 3_1:+18952845 None:intergenic
TAGTACTTACCATCCCATAA+TGG 0.502361 3_1:+18953909 None:intergenic
CATGAATGGACAAAGTAGAA+AGG 0.503547 3_1:+18952052 None:intergenic
TAAGCATGTCATATGATGAA+TGG 0.503927 3_1:-18953164 Msa0351720:CDS
GGTCATCCTTTGTGGATCTC+GGG 0.505344 3_1:-18952578 Msa0351720:CDS
AATTCTTCACGTTTCGGTGT+TGG 0.509707 3_1:+18955222 None:intergenic
TTTGATCAGCAAGAAACTCT+AGG 0.509799 3_1:+18955048 None:intergenic
CATTGTAAACAAGCCGGGCA+AGG 0.511016 3_1:+18954733 None:intergenic
AGGTGCAGTTGGTAGTATCC+GGG 0.515686 3_1:+18954893 None:intergenic
TCAAGTGATTCGAGAGAGGT+TGG 0.516750 3_1:-18955351 Msa0351720:CDS
GATTTAGCAAAATCAGTGTC+AGG 0.519412 3_1:-18953861 Msa0351720:CDS
GATGGCTTCGAGAGAGGAGT+GGG 0.519925 3_1:-18952260 Msa0351720:CDS
CAACATGAGAGAATGAAGAT+TGG 0.521293 3_1:+18952369 None:intergenic
GACAAAGTAGAAAGGGAGCT+TGG 0.521939 3_1:+18952060 None:intergenic
ATGAATGGACAAAGTAGAAA+GGG 0.524850 3_1:+18952053 None:intergenic
CTGCCCAAGTGGTGGTAACT+GGG 0.526321 3_1:+18952969 None:intergenic
TCGGAGGCTGCATAGATTGG+AGG 0.526970 3_1:+18952303 None:intergenic
TCACTGATATTATCAGCCTT+GGG 0.527987 3_1:+18952661 None:intergenic
TGGGTAAGACAACCCTTGCC+CGG 0.530981 3_1:-18954746 Msa0351720:CDS
ATCATGGCAGGGGTTGTTGG+TGG 0.532073 3_1:-18955395 Msa0351720:CDS
ATTTGACATTAAACAGTTGG+CGG 0.533087 3_1:-18953295 Msa0351720:CDS
TATCCAAATCTTGAGTTGAT+CGG 0.533325 3_1:-18954306 Msa0351720:CDS
CAAATTGCTCATGTATCTTG+TGG 0.534184 3_1:+18954709 None:intergenic
TGAGCACATGTCAGAATGGA+AGG 0.535790 3_1:-18952827 Msa0351720:CDS
ATCAAGCTTTGGATGGCTGA+AGG 0.536088 3_1:-18954035 Msa0351720:CDS
TCTCGACAGCTTGCCAGAAG+AGG 0.536417 3_1:-18952088 Msa0351720:CDS
TGGAAAGCTTCTTGAGAGAG+TGG 0.537235 3_1:+18952944 None:intergenic
ATTGGAGGGCAGCTGCCTCC+CGG 0.537873 3_1:+18952318 None:intergenic
AAATTCCCTGAGAATTGCTC+GGG 0.538677 3_1:+18954635 None:intergenic
CCATCAAAGAATACCGAGGC+AGG 0.541250 3_1:-18953059 Msa0351720:CDS
GTGGTCATTGTAAACAAGCC+GGG 0.541484 3_1:+18954728 None:intergenic
ATGTGCAAGAAATCCCTAAA+CGG 0.542266 3_1:-18953809 Msa0351720:CDS
GATGGAAGAAGACTCTCCTC+TGG 0.544276 3_1:+18952169 None:intergenic
CTACTACTTCCGTTTAGCCA+TGG 0.551595 3_1:-18954483 Msa0351720:CDS
TTACGTCATCTTAATCTGAA+AGG 0.552266 3_1:-18953405 Msa0351720:CDS
GAAATTCCCTGAGAATTGCT+CGG 0.552571 3_1:+18954634 None:intergenic
TGTGGTCATTGTAAACAAGC+CGG 0.552807 3_1:+18954727 None:intergenic
CGGAGGCTGCATAGATTGGA+GGG 0.554469 3_1:+18952304 None:intergenic
TAGGACATCTTTCTATTCGG+AGG 0.554522 3_1:+18952287 None:intergenic
AAGTAATGGACAGTCATGAA+TGG 0.556324 3_1:+18952038 None:intergenic
CTCGACAGCTTGCCAGAAGA+GGG 0.556713 3_1:-18952087 Msa0351720:CDS
TCAGTATAATGAGTGTGATT+GGG 0.557405 3_1:-18954770 Msa0351720:CDS
CGATATCTGTAACGGGAATG+TGG 0.558841 3_1:-18954520 Msa0351720:CDS
TCTGGCAAGCTGTCGAGACA+AGG 0.558978 3_1:+18952093 None:intergenic
TTGGGCTTATCTTAAAGCGT+TGG 0.561030 3_1:+18953673 None:intergenic
CTTTGATGGTTAGCCTCACG+AGG 0.563408 3_1:+18953073 None:intergenic
ATTGCCATCTAGCTTGAAAA+GGG 0.567105 3_1:-18952599 Msa0351720:CDS
AGAAGCGTATAGTGAAGACT+TGG 0.568214 3_1:-18954604 Msa0351720:CDS
AGATGCCACCGAATATAAGT+AGG 0.568400 3_1:-18953368 Msa0351720:CDS
TGCAAAGAAGGAAGGTGTTG+AGG 0.570630 3_1:+18952727 None:intergenic
ATGGTAGAAGCGCAGGGTTG+TGG 0.570756 3_1:-18953699 Msa0351720:CDS
AGAAGGAAGGTGTTGAGGCA+GGG 0.571602 3_1:+18952732 None:intergenic
TCATCCACCAAAGGTGCAGT+TGG 0.572147 3_1:+18954882 None:intergenic
CTCAAATCGCAAAGTTTCAA+GGG 0.572479 3_1:+18952846 None:intergenic
TAAATTGATGGCTTCGAGAG+AGG 0.572616 3_1:-18952266 Msa0351720:CDS
CAATTGCAACAGAGACTAGC+TGG 0.573807 3_1:-18954567 Msa0351720:CDS
ATTGTAAACAAGCCGGGCAA+GGG 0.574819 3_1:+18954734 None:intergenic
AACTCAACCATCTTCAAGGA+AGG 0.575873 3_1:-18953272 Msa0351720:CDS
GAGCTTTCCAAATTGGCTTG+GGG 0.577557 3_1:-18953037 Msa0351720:CDS
ATATGTGGCGTTTATCAGAC+GGG 0.579008 3_1:-18954173 Msa0351720:CDS
CCGGAAAACGATTCTAGCCA+TGG 0.580213 3_1:+18952337 None:intergenic
GTAACGGGAATGTGGAATGT+TGG 0.581317 3_1:-18954512 Msa0351720:CDS
TACGAGATTGCAACCAGAGA+GGG 0.581409 3_1:+18953602 None:intergenic
TGAGTTAATCAAGCTTTGGA+TGG 0.581426 3_1:-18954042 Msa0351720:CDS
GATATGTGGCGTTTATCAGA+CGG 0.584298 3_1:-18954174 Msa0351720:CDS
ATATGGTAGAGAGAACGAAA+AGG 0.585015 3_1:-18954850 Msa0351720:CDS
CTAGAACTAAAGAGATGTGA+TGG 0.586587 3_1:-18952637 Msa0351720:CDS
GTTCCCAGTTACCACCACTT+GGG 0.591537 3_1:-18952972 Msa0351720:CDS
TCTTACTTCCAGAAGATCCA+TGG 0.592330 3_1:+18954466 None:intergenic
ACATGTCAGAATGGAAGGAA+TGG 0.592352 3_1:-18952822 Msa0351720:CDS
GGAATTGACAAATTCAGTAG+TGG 0.592373 3_1:-18955014 Msa0351720:CDS
TTTAACCTACTTATATTCGG+TGG 0.595069 3_1:+18953363 None:intergenic
GCAGTCTAACTATAACATGT+TGG 0.601780 3_1:-18952429 Msa0351720:CDS
ATTTGTTGCCGCAACATCAG+CGG 0.602553 3_1:+18953215 None:intergenic
CAGAATTGAGATCATGGCAG+GGG 0.604509 3_1:-18955405 None:intergenic
AAGAAGACTCTCCTCTGGAA+AGG 0.605372 3_1:+18952174 None:intergenic
TATTGATCCCGCTGATGTTG+CGG 0.607241 3_1:-18953223 Msa0351720:CDS
TCTTTCAAGTGATTCGAGAG+AGG 0.608397 3_1:-18955355 Msa0351720:CDS
CTTTAGCTCTAGAAACATTG+GGG 0.608632 3_1:-18954251 Msa0351720:CDS
TCATGTTGTACGATAGTCCA+TGG 0.612473 3_1:-18952354 Msa0351720:CDS
ATTGCAGGCTTCAATTCCCA+AGG 0.612890 3_1:-18952677 Msa0351720:CDS
GATTTGAGCACATGTCAGAA+TGG 0.615008 3_1:-18952831 Msa0351720:CDS
TATAATGAGTGTGATTGGGA+TGG 0.615302 3_1:-18954766 Msa0351720:CDS
TACCACCCTCTATTAGTAAG+CGG 0.616554 3_1:+18953832 None:intergenic
ACTACTTCCATGAAAGTCTG+TGG 0.618407 3_1:-18955310 Msa0351720:CDS
TCAGAATTGAGATCATGGCA+GGG 0.621148 3_1:-18955406 None:intergenic
TGATGGCTTCGAGAGAGGAG+TGG 0.622175 3_1:-18952261 Msa0351720:CDS
GATGAATGGAGAGAAATGGA+TGG 0.623011 3_1:-18953150 Msa0351720:CDS
AATTTGGAAAGCTCCTGCCT+CGG 0.623494 3_1:+18953046 None:intergenic
AAATATTGGAGACTGATATG+TGG 0.624393 3_1:-18954188 Msa0351720:CDS
ATGAAGGTAGACTCACACCC+CGG 0.625952 3_1:-18954911 Msa0351720:CDS
GAGTTCCGCTTACTAATAGA+GGG 0.626134 3_1:-18953837 Msa0351720:CDS
TCTTTGGTCCAAATCTACAA+TGG 0.626392 3_1:-18952486 Msa0351720:CDS
CTGGCAAGCTGTCGAGACAA+GGG 0.631230 3_1:+18952094 None:intergenic
GAGTGGAACTGCCCAAGTGG+TGG 0.633284 3_1:+18952961 None:intergenic
TAAGGGACTACACAGTCTGA+TGG 0.638234 3_1:-18953718 Msa0351720:CDS
GTAACTATGCCATTATGGGA+TGG 0.638571 3_1:-18953918 Msa0351720:CDS
AATCTTGGAGTCCTTTCCAG+AGG 0.638861 3_1:-18952185 Msa0351720:CDS
ATAATGAGTGTGATTGGGAT+GGG 0.640717 3_1:-18954765 Msa0351720:CDS
AACGCTTTAAGATAAGCCCA+AGG 0.643063 3_1:-18953671 Msa0351720:CDS
TATTGTGACAACGCATGACA+AGG 0.648713 3_1:-18954442 Msa0351720:CDS
ATCGCAGATTCATCCACCAA+AGG 0.649157 3_1:+18954873 None:intergenic
ACAGCTACACATATCCGAAG+AGG 0.652753 3_1:+18952462 None:intergenic
TCTCACCCGAGCAATTCTCA+GGG 0.655486 3_1:-18954640 Msa0351720:CDS
CAATGACCCGAGATCCACAA+AGG 0.659140 3_1:+18952572 None:intergenic
GGTGCAGTTGGTAGTATCCG+GGG 0.659776 3_1:+18954894 None:intergenic
AAGAAAATAGTAGAAAAGTG+CGG 0.662420 3_1:-18954282 Msa0351720:CDS
AAAATAGTAGAAAAGTGCGG+GGG 0.682492 3_1:-18954279 Msa0351720:CDS
GTGCAGTGCAAAAGGCAATG+AGG 0.686885 3_1:+18952399 None:intergenic
GAAGGCTTGCTAAAGTATCG+GGG 0.688189 3_1:-18954017 Msa0351720:CDS
TTTGTTGTGGGAAAGCAGCG+TGG 0.690398 3_1:-18953318 Msa0351720:CDS
AAATAGTAGAAAAGTGCGGG+GGG 0.692810 3_1:-18954278 Msa0351720:CDS
TTCCGCTTACTAATAGAGGG+TGG 0.692830 3_1:-18953834 Msa0351720:CDS
GAAAATAGTAGAAAAGTGCG+GGG 0.696499 3_1:-18954280 Msa0351720:CDS
AGTCTGATGGTAGAAGCGCA+GGG 0.698716 3_1:-18953705 Msa0351720:CDS
AACCAAATAGAAACCTCGTG+AGG 0.701988 3_1:-18953086 Msa0351720:CDS
CTACGAGATTGCAACCAGAG+AGG 0.704581 3_1:+18953601 None:intergenic
ATGGCTTCGAGAGAGGAGTG+GGG 0.704958 3_1:-18952259 Msa0351720:CDS
TATGTGGCGTTTATCAGACG+GGG 0.722185 3_1:-18954172 Msa0351720:CDS
AGAGAGTGGAACTGCCCAAG+TGG 0.724694 3_1:+18952958 None:intergenic
ACGCTTTAAGATAAGCCCAA+GGG 0.726622 3_1:-18953670 Msa0351720:CDS
CTAACCATCAAAGAATACCG+AGG 0.755998 3_1:-18953063 Msa0351720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATCATATTCTTAAAATTA+AGG - chr3_1:18953707-18953726 Msa0351720:CDS 15.0%
!! GATCATATTCTTAAAATTAA+GGG - chr3_1:18953708-18953727 Msa0351720:CDS 15.0%
!!! TTTTTTAACCTACTTATATT+CGG + chr3_1:18954086-18954105 None:intergenic 15.0%
!! ATTTATTTAATTGAAGTAGC+CGG + chr3_1:18953052-18953071 None:intergenic 20.0%
!! GCTACTTCAATTAAATAAAT+TGG - chr3_1:18953052-18953071 Msa0351720:CDS 20.0%
!! ACTTCAATTAAATAAATTGG+AGG - chr3_1:18953055-18953074 Msa0351720:CDS 20.0%
!!! ACAAATTTTATGAAACTGAA+TGG - chr3_1:18953228-18953247 Msa0351720:CDS 20.0%
!!! AACTGAATGGATTAAAATAT+TGG - chr3_1:18953241-18953260 Msa0351720:CDS 20.0%
!!! GTTAAATAGAATTTTCTCTA+GGG + chr3_1:18954903-18954922 None:intergenic 20.0%
!!! TGTTAAATAGAATTTTCTCT+AGG + chr3_1:18954904-18954923 None:intergenic 20.0%
! AAAAGTTGTTATGCCATATT+TGG - chr3_1:18952504-18952523 Msa0351720:CDS 25.0%
! TTTATTTAATTGAAGTAGCC+GGG + chr3_1:18953051-18953070 None:intergenic 25.0%
! AAGAAAATAGTAGAAAAGTG+CGG - chr3_1:18953161-18953180 Msa0351720:CDS 25.0%
! TTCAAGACTAAAATATTTGC+AGG - chr3_1:18953812-18953831 Msa0351720:CDS 25.0%
! CAAATTATACAGCATACAAA+TGG + chr3_1:18953949-18953968 None:intergenic 25.0%
! GTTAGAACAATGTTTCAAAT+TGG - chr3_1:18953980-18953999 Msa0351720:CDS 25.0%
!!! TTAGTATCTCTAGAATTGTT+AGG - chr3_1:18954437-18954456 Msa0351720:intron 25.0%
! ATTATAGGTACAATGATTTC+TGG - chr3_1:18954545-18954564 Msa0351720:CDS 25.0%
!! ATTTCCAATTTTTGCAAAGA+AGG + chr3_1:18954731-18954750 None:intergenic 25.0%
!! ATTTAGGACATCTTTCTATT+CGG + chr3_1:18955162-18955181 None:intergenic 25.0%
!!! TAGTGATGATTTTGAAATCT+TGG - chr3_1:18955243-18955262 Msa0351720:CDS 25.0%
!!! CTTTCGCTTTTTATTAAGCA+AGG - chr3_1:18952339-18952358 Msa0351720:CDS 30.0%
TTAAGCAAGGATTTGAAGAT+AGG - chr3_1:18952352-18952371 Msa0351720:CDS 30.0%
ACCTTCATTACTACCAAATA+TGG + chr3_1:18952520-18952539 None:intergenic 30.0%
! TTATACTGATTATGCGTACA+AGG + chr3_1:18952662-18952681 None:intergenic 30.0%
ATCAGTATAATGAGTGTGAT+TGG - chr3_1:18952672-18952691 Msa0351720:CDS 30.0%
TCAGTATAATGAGTGTGATT+GGG - chr3_1:18952673-18952692 Msa0351720:CDS 30.0%
AGCAATTTGAACTTAAAGCT+TGG - chr3_1:18952748-18952767 Msa0351720:CDS 30.0%
GCAATTTGAACTTAAAGCTT+GGG - chr3_1:18952749-18952768 Msa0351720:CDS 30.0%
!! GTTTTAGACGATATCTGTAA+CGG - chr3_1:18952915-18952934 Msa0351720:CDS 30.0%
! TTTTAGACGATATCTGTAAC+GGG - chr3_1:18952916-18952935 Msa0351720:CDS 30.0%
! ATTTGTTCATCATGCTTTTG+TGG - chr3_1:18953097-18953116 Msa0351720:CDS 30.0%
! TTTGTTCATCATGCTTTTGT+GGG - chr3_1:18953098-18953117 Msa0351720:CDS 30.0%
!! TATCCAAATCTTGAGTTGAT+CGG - chr3_1:18953137-18953156 Msa0351720:CDS 30.0%
! AGAAAATAGTAGAAAAGTGC+GGG - chr3_1:18953162-18953181 Msa0351720:CDS 30.0%
AAATATTGGAGACTGATATG+TGG - chr3_1:18953255-18953274 Msa0351720:CDS 30.0%
AAGGTAACTCAATCTAAGTA+CGG + chr3_1:18953309-18953328 None:intergenic 30.0%
!!! CTTTTTTTCTTCTTTCCGAA+GGG - chr3_1:18953360-18953379 Msa0351720:CDS 30.0%
AATCAGTAACTATGCCATTA+TGG - chr3_1:18953520-18953539 Msa0351720:CDS 30.0%
ATCAGTAACTATGCCATTAT+GGG - chr3_1:18953521-18953540 Msa0351720:CDS 30.0%
! ACAAATTTTTCTGTACCCTT+GGG + chr3_1:18953791-18953810 None:intergenic 30.0%
! AACAAATTTTTCTGTACCCT+TGG + chr3_1:18953792-18953811 None:intergenic 30.0%
TACAGCATACAAATGGAATT+GGG + chr3_1:18953942-18953961 None:intergenic 30.0%
ATACAGCATACAAATGGAAT+TGG + chr3_1:18953943-18953962 None:intergenic 30.0%
TGAGTTTGCAAAAATCTGAA+GGG + chr3_1:18954013-18954032 None:intergenic 30.0%
ATGAGTTTGCAAAAATCTGA+AGG + chr3_1:18954014-18954033 None:intergenic 30.0%
TTACGTCATCTTAATCTGAA+AGG - chr3_1:18954038-18954057 Msa0351720:CDS 30.0%
TTTAACCTACTTATATTCGG+TGG + chr3_1:18954083-18954102 None:intergenic 30.0%
TGGATTTGACATTAAACAGT+TGG - chr3_1:18954145-18954164 Msa0351720:intron 30.0%
ATTTGACATTAAACAGTTGG+CGG - chr3_1:18954148-18954167 Msa0351720:intron 30.0%
TAAGCATGTCATATGATGAA+TGG - chr3_1:18954279-18954298 Msa0351720:CDS 30.0%
ATATGATGAATGGAGAGAAA+TGG - chr3_1:18954289-18954308 Msa0351720:CDS 30.0%
AAAGTTTCAAGGGATCTAAA+TGG + chr3_1:18954590-18954609 None:intergenic 30.0%
!! AAATAGAATTTTCTCTAGGG+CGG + chr3_1:18954900-18954919 None:intergenic 30.0%
AGAAAGATGTCCTAAATTGA+TGG - chr3_1:18955165-18955184 Msa0351720:CDS 30.0%
ATTGTTTCAGAGAATTGAGT+TGG + chr3_1:18955216-18955235 None:intergenic 30.0%
ACTCGAGATTTAATAGTTGA+TGG + chr3_1:18955295-18955314 None:intergenic 30.0%
GCAGTTTATTATTCATAGGT+TGG + chr3_1:18955330-18955349 None:intergenic 30.0%
AAGGGCAGTTTATTATTCAT+AGG + chr3_1:18955334-18955353 None:intergenic 30.0%
ATGAATGGACAAAGTAGAAA+GGG + chr3_1:18955393-18955412 None:intergenic 30.0%
!!! GTTTTTTCCACAGACTTTCA+TGG + chr3_1:18952143-18952162 None:intergenic 35.0%
CGATTCTATCAATCAAGTAC+TGG - chr3_1:18952176-18952195 Msa0351720:CDS 35.0%
ACTGGATGATGCAGATATAA+AGG - chr3_1:18952194-18952213 Msa0351720:CDS 35.0%
TTTGATCAGCAAGAAACTCT+AGG + chr3_1:18952398-18952417 None:intergenic 35.0%
AGAGTTTCTTGCTGATCAAA+AGG - chr3_1:18952398-18952417 Msa0351720:CDS 35.0%
TGCTGATCAAAAGGATAGAT+TGG - chr3_1:18952407-18952426 Msa0351720:CDS 35.0%
GCTGATCAAAAGGATAGATT+GGG - chr3_1:18952408-18952427 Msa0351720:CDS 35.0%
GGAATTGACAAATTCAGTAG+TGG - chr3_1:18952429-18952448 Msa0351720:CDS 35.0%
AGTAGTGGTGATTGTGAAAT+TGG - chr3_1:18952444-18952463 Msa0351720:CDS 35.0%
! GCCATATTTGGTAGTAATGA+AGG - chr3_1:18952516-18952535 Msa0351720:CDS 35.0%
ATATGGTAGAGAGAACGAAA+AGG - chr3_1:18952593-18952612 Msa0351720:CDS 35.0%
! TTTTTACGTTCAGACAGTCA+TGG - chr3_1:18952630-18952649 Msa0351720:CDS 35.0%
TATAATGAGTGTGATTGGGA+TGG - chr3_1:18952677-18952696 Msa0351720:CDS 35.0%
ATAATGAGTGTGATTGGGAT+GGG - chr3_1:18952678-18952697 Msa0351720:CDS 35.0%
CAAATTGCTCATGTATCTTG+TGG + chr3_1:18952737-18952756 None:intergenic 35.0%
AAGGAAGTAGCATCAATCAT+GGG - chr3_1:18953020-18953039 Msa0351720:CDS 35.0%
! GAAAATAGTAGAAAAGTGCG+GGG - chr3_1:18953163-18953182 Msa0351720:CDS 35.0%
! AAAATAGTAGAAAAGTGCGG+GGG - chr3_1:18953164-18953183 Msa0351720:CDS 35.0%
!! ACCTTTAGCTCTAGAAACAT+TGG - chr3_1:18953190-18953209 Msa0351720:CDS 35.0%
!! CCTTTAGCTCTAGAAACATT+GGG - chr3_1:18953191-18953210 Msa0351720:CDS 35.0%
!! CTTTAGCTCTAGAAACATTG+GGG - chr3_1:18953192-18953211 Msa0351720:CDS 35.0%
AGGTAACTCAATCTAAGTAC+GGG + chr3_1:18953308-18953327 None:intergenic 35.0%
TCAGATTAGAAGGGAAGTTA+AGG + chr3_1:18953328-18953347 None:intergenic 35.0%
AACAACGCTTCAGATTAGAA+GGG + chr3_1:18953337-18953356 None:intergenic 35.0%
AAACAACGCTTCAGATTAGA+AGG + chr3_1:18953338-18953357 None:intergenic 35.0%
!!! GCTTTTTTTCTTCTTTCCGA+AGG - chr3_1:18953359-18953378 Msa0351720:CDS 35.0%
AGAGTGAGTTAATCAAGCTT+TGG - chr3_1:18953397-18953416 Msa0351720:CDS 35.0%
!! TGAGTTAATCAAGCTTTGGA+TGG - chr3_1:18953401-18953420 Msa0351720:CDS 35.0%
AGACAAAAGTGAAGAAGAGT+TGG - chr3_1:18953452-18953471 Msa0351720:CDS 35.0%
GACAAAAGTGAAGAAGAGTT+GGG - chr3_1:18953453-18953472 Msa0351720:CDS 35.0%
! ATGGCATAGTTACTGATTGT+TGG + chr3_1:18953518-18953537 None:intergenic 35.0%
TAGTACTTACCATCCCATAA+TGG + chr3_1:18953537-18953556 None:intergenic 35.0%
GATTTAGCAAAATCAGTGTC+AGG - chr3_1:18953582-18953601 Msa0351720:CDS 35.0%
ATGTGCAAGAAATCCCTAAA+CGG - chr3_1:18953634-18953653 Msa0351720:CDS 35.0%
TATCACCATCTTCCAAATCA+AGG + chr3_1:18953680-18953699 None:intergenic 35.0%
!! ATGCTGACTGATTTTGTTGT+GGG - chr3_1:18954113-18954132 Msa0351720:intron 35.0%
AAGGAAGGCTTCAAATTTCA+GGG - chr3_1:18954186-18954205 Msa0351720:CDS 35.0%
TGCGATGGAATAGAGATTAT+AGG - chr3_1:18954530-18954549 Msa0351720:CDS 35.0%
CTCAAATCGCAAAGTTTCAA+GGG + chr3_1:18954600-18954619 None:intergenic 35.0%
TACAAAGCTCTTGAAGCAAA+GGG + chr3_1:18954664-18954683 None:intergenic 35.0%
ATACAAAGCTCTTGAAGCAA+AGG + chr3_1:18954665-18954684 None:intergenic 35.0%
! CCAATTTTTGCAAAGAAGGA+AGG + chr3_1:18954727-18954746 None:intergenic 35.0%
CCTTCCTTCTTTGCAAAAAT+TGG - chr3_1:18954724-18954743 Msa0351720:CDS 35.0%
! TATTGATTGCCAAGAATTGC+AGG - chr3_1:18954751-18954770 Msa0351720:CDS 35.0%
TCACTGATATTATCAGCCTT+GGG + chr3_1:18954785-18954804 None:intergenic 35.0%
!! CATCACATCTCTTTAGTTCT+AGG + chr3_1:18954808-18954827 None:intergenic 35.0%
CTAGAACTAAAGAGATGTGA+TGG - chr3_1:18954806-18954825 Msa0351720:CDS 35.0%
! AATTGCCATCTAGCTTGAAA+AGG - chr3_1:18954843-18954862 Msa0351720:CDS 35.0%
! ATTGCCATCTAGCTTGAAAA+GGG - chr3_1:18954844-18954863 Msa0351720:CDS 35.0%
! CAGTGCTTTTCTTGAAAAGT+TGG - chr3_1:18954922-18954941 Msa0351720:CDS 35.0%
TTGGAAGTTGAAGACTTCTT+TGG - chr3_1:18954941-18954960 Msa0351720:CDS 35.0%
TCTTTGGTCCAAATCTACAA+TGG - chr3_1:18954957-18954976 Msa0351720:CDS 35.0%
AAATCTACAATGGTCCTCTT+CGG - chr3_1:18954967-18954986 Msa0351720:CDS 35.0%
GCAGTCTAACTATAACATGT+TGG - chr3_1:18955014-18955033 Msa0351720:CDS 35.0%
CAACATGAGAGAATGAAGAT+TGG + chr3_1:18955077-18955096 None:intergenic 35.0%
CATGAATGGACAAAGTAGAA+AGG + chr3_1:18955394-18955413 None:intergenic 35.0%
! TCTTTCAAGTGATTCGAGAG+AGG - chr3_1:18952088-18952107 Msa0351720:CDS 40.0%
ACTACTTCCATGAAAGTCTG+TGG - chr3_1:18952133-18952152 Msa0351720:CDS 40.0%
! AATTCTTCACGTTTCGGTGT+TGG + chr3_1:18952224-18952243 None:intergenic 40.0%
AACACCGAAACGTGAAGAAT+TGG - chr3_1:18952223-18952242 Msa0351720:CDS 40.0%
CAAGCCAATTCTTCACGTTT+CGG + chr3_1:18952230-18952249 None:intergenic 40.0%
GTGGATGAATCTGCGATATA+TGG - chr3_1:18952576-18952595 Msa0351720:CDS 40.0%
TGTGGTCATTGTAAACAAGC+CGG + chr3_1:18952719-18952738 None:intergenic 40.0%
AAATTCCCTGAGAATTGCTC+GGG + chr3_1:18952811-18952830 None:intergenic 40.0%
GAAATTCCCTGAGAATTGCT+CGG + chr3_1:18952812-18952831 None:intergenic 40.0%
! AGAAGCGTATAGTGAAGACT+TGG - chr3_1:18952839-18952858 Msa0351720:CDS 40.0%
TCTTACTTCCAGAAGATCCA+TGG + chr3_1:18952980-18952999 None:intergenic 40.0%
TATTGTGACAACGCATGACA+AGG - chr3_1:18953001-18953020 Msa0351720:CDS 40.0%
CAAGGAAGTAGCATCAATCA+TGG - chr3_1:18953019-18953038 Msa0351720:CDS 40.0%
ATTTAATTGAAGTAGCCGGG+TGG + chr3_1:18953048-18953067 None:intergenic 40.0%
TTGCCGATCAACTCAAGATT+TGG + chr3_1:18953143-18953162 None:intergenic 40.0%
! AAATAGTAGAAAAGTGCGGG+GGG - chr3_1:18953165-18953184 Msa0351720:CDS 40.0%
!! CCCAATGTTTCTAGAGCTAA+AGG + chr3_1:18953194-18953213 None:intergenic 40.0%
GATATGTGGCGTTTATCAGA+CGG - chr3_1:18953269-18953288 Msa0351720:CDS 40.0%
ATATGTGGCGTTTATCAGAC+GGG - chr3_1:18953270-18953289 Msa0351720:CDS 40.0%
GGTAACTCAATCTAAGTACG+GGG + chr3_1:18953307-18953326 None:intergenic 40.0%
TTCTCAAACTCATAGCCCTT+CGG + chr3_1:18953378-18953397 None:intergenic 40.0%
!! CTGAAGGCTTGCTAAAGTAT+CGG - chr3_1:18953424-18953443 Msa0351720:CDS 40.0%
!! TGAAGGCTTGCTAAAGTATC+GGG - chr3_1:18953425-18953444 Msa0351720:CDS 40.0%
GTAACTATGCCATTATGGGA+TGG - chr3_1:18953525-18953544 Msa0351720:CDS 40.0%
AGAGTTCCGCTTACTAATAG+AGG - chr3_1:18953605-18953624 Msa0351720:CDS 40.0%
GAGTTCCGCTTACTAATAGA+GGG - chr3_1:18953606-18953625 Msa0351720:CDS 40.0%
TACCACCCTCTATTAGTAAG+CGG + chr3_1:18953614-18953633 None:intergenic 40.0%
TTGGGCTTATCTTAAAGCGT+TGG + chr3_1:18953773-18953792 None:intergenic 40.0%
!! AACGCTTTAAGATAAGCCCA+AGG - chr3_1:18953772-18953791 Msa0351720:CDS 40.0%
!! ACGCTTTAAGATAAGCCCAA+GGG - chr3_1:18953773-18953792 Msa0351720:CDS 40.0%
TTGCAATCTCAGTGTGAGAA+AGG + chr3_1:18953914-18953933 None:intergenic 40.0%
AGATGCCACCGAATATAAGT+AGG - chr3_1:18954075-18954094 Msa0351720:intron 40.0%
!! GATGCTGACTGATTTTGTTG+TGG - chr3_1:18954112-18954131 Msa0351720:intron 40.0%
AACTCAACCATCTTCAAGGA+AGG - chr3_1:18954171-18954190 Msa0351720:CDS 40.0%
! TTTGAAGCCTTCCTTGAAGA+TGG + chr3_1:18954181-18954200 None:intergenic 40.0%
CAAGGAAGGCTTCAAATTTC+AGG - chr3_1:18954185-18954204 Msa0351720:CDS 40.0%
AAGGCTTCAAATTTCAGGGT+TGG - chr3_1:18954190-18954209 Msa0351720:CDS 40.0%
TGATGTTGCGGCAACAAATT+TGG - chr3_1:18954232-18954251 Msa0351720:CDS 40.0%
GATGAATGGAGAGAAATGGA+TGG - chr3_1:18954293-18954312 Msa0351720:CDS 40.0%
AACACATCTCTCTGTCTTAG+AGG - chr3_1:18954328-18954347 Msa0351720:intron 40.0%
AACCAAATAGAAACCTCGTG+AGG - chr3_1:18954357-18954376 Msa0351720:intron 40.0%
CTAACCATCAAAGAATACCG+AGG - chr3_1:18954380-18954399 Msa0351720:intron 40.0%
TTACAATCCCCAAGCCAATT+TGG + chr3_1:18954416-18954435 None:intergenic 40.0%
CTCAAGAAGCTTTCCATTTC+AGG - chr3_1:18954506-18954525 Msa0351720:CDS 40.0%
GCTCAAATCGCAAAGTTTCA+AGG + chr3_1:18954601-18954620 None:intergenic 40.0%
GATTTGAGCACATGTCAGAA+TGG - chr3_1:18954612-18954631 Msa0351720:CDS 40.0%
ACATGTCAGAATGGAAGGAA+TGG - chr3_1:18954621-18954640 Msa0351720:CDS 40.0%
GAATTGAAGCCTGCAATTCT+TGG + chr3_1:18954763-18954782 None:intergenic 40.0%
GTCACTGATATTATCAGCCT+TGG + chr3_1:18954786-18954805 None:intergenic 40.0%
!! ATGACCCTTTTCAAGCTAGA+TGG + chr3_1:18954851-18954870 None:intergenic 40.0%
TTGAAAAGGGTCATCCTTTG+TGG - chr3_1:18954857-18954876 Msa0351720:CDS 40.0%
GAAGAGGACCATTGTAGATT+TGG + chr3_1:18954968-18954987 None:intergenic 40.0%
TCATGTTGTACGATAGTCCA+TGG - chr3_1:18955089-18955108 Msa0351720:CDS 40.0%
TAGGACATCTTTCTATTCGG+AGG + chr3_1:18955159-18955178 None:intergenic 40.0%
TCTCTCGAAGCCATCAATTT+AGG + chr3_1:18955178-18955197 None:intergenic 40.0%
! TAAATTGATGGCTTCGAGAG+AGG - chr3_1:18955177-18955196 Msa0351720:CDS 40.0%
TCAAGTGATTCGAGAGAGGT+TGG - chr3_1:18952092-18952111 Msa0351720:CDS 45.0%
! AAGCTTCGCATCTTGCCTTT+TGG + chr3_1:18952318-18952337 None:intergenic 45.0%
!! AAGGTGCAGTTGGTAGTATC+CGG + chr3_1:18952554-18952573 None:intergenic 45.0%
GATACTACCAACTGCACCTT+TGG - chr3_1:18952554-18952573 Msa0351720:CDS 45.0%
ATCGCAGATTCATCCACCAA+AGG + chr3_1:18952573-18952592 None:intergenic 45.0%
ATTGTAAACAAGCCGGGCAA+GGG + chr3_1:18952712-18952731 None:intergenic 45.0%
GTGGTCATTGTAAACAAGCC+GGG + chr3_1:18952718-18952737 None:intergenic 45.0%
GTCTCTGTTGCAATTGTCGT+TGG + chr3_1:18952872-18952891 None:intergenic 45.0%
CAATTGCAACAGAGACTAGC+TGG - chr3_1:18952876-18952895 Msa0351720:CDS 45.0%
! CGATATCTGTAACGGGAATG+TGG - chr3_1:18952923-18952942 Msa0351720:CDS 45.0%
! GTAACGGGAATGTGGAATGT+TGG - chr3_1:18952931-18952950 Msa0351720:CDS 45.0%
CTACTACTTCCGTTTAGCCA+TGG - chr3_1:18952960-18952979 Msa0351720:CDS 45.0%
CCAGAAGATCCATGGCTAAA+CGG + chr3_1:18952972-18952991 None:intergenic 45.0%
TATGTGGCGTTTATCAGACG+GGG - chr3_1:18953271-18953290 Msa0351720:CDS 45.0%
!! ATCAAGCTTTGGATGGCTGA+AGG - chr3_1:18953408-18953427 Msa0351720:CDS 45.0%
!! GAAGGCTTGCTAAAGTATCG+GGG - chr3_1:18953426-18953445 Msa0351720:CDS 45.0%
TTCCGCTTACTAATAGAGGG+TGG - chr3_1:18953609-18953628 Msa0351720:CDS 45.0%
!! CATTTGGTGCTGCCTTGATT+TGG - chr3_1:18953665-18953684 Msa0351720:CDS 45.0%
!! TGCTGCCTTGATTTGGAAGA+TGG - chr3_1:18953672-18953691 Msa0351720:CDS 45.0%
TAAGGGACTACACAGTCTGA+TGG - chr3_1:18953725-18953744 Msa0351720:CDS 45.0%
TACGAGATTGCAACCAGAGA+GGG + chr3_1:18953844-18953863 None:intergenic 45.0%
TATTGATCCCGCTGATGTTG+CGG - chr3_1:18954220-18954239 Msa0351720:CDS 45.0%
! ATTTGTTGCCGCAACATCAG+CGG + chr3_1:18954231-18954250 None:intergenic 45.0%
AGCCTCACGAGGTTTCTATT+TGG + chr3_1:18954362-18954381 None:intergenic 45.0%
AATTTGGAAAGCTCCTGCCT+CGG + chr3_1:18954400-18954419 None:intergenic 45.0%
AGGAGCTTTCCAAATTGGCT+TGG - chr3_1:18954404-18954423 Msa0351720:intron 45.0%
! GGAGCTTTCCAAATTGGCTT+GGG - chr3_1:18954405-18954424 Msa0351720:intron 45.0%
!! GAGCTTTCCAAATTGGCTTG+GGG - chr3_1:18954406-18954425 Msa0351720:intron 45.0%
TGGAAAGCTTCTTGAGAGAG+TGG + chr3_1:18954502-18954521 None:intergenic 45.0%
TATTCCATCGCAGCCTGAAA+TGG + chr3_1:18954522-18954541 None:intergenic 45.0%
TGAGCACATGTCAGAATGGA+AGG - chr3_1:18954616-18954635 Msa0351720:CDS 45.0%
! GGCAGGGAACTTTTCAACTT+CGG + chr3_1:18954698-18954717 None:intergenic 45.0%
!! TGCAAAGAAGGAAGGTGTTG+AGG + chr3_1:18954719-18954738 None:intergenic 45.0%
ATTGCAGGCTTCAATTCCCA+AGG - chr3_1:18954766-18954785 Msa0351720:CDS 45.0%
ACAGCTACACATATCCGAAG+AGG + chr3_1:18954984-18955003 None:intergenic 45.0%
! CCATGGCTAGAATCGTTTTC+CGG - chr3_1:18955106-18955125 Msa0351720:CDS 45.0%
! CATGGCTAGAATCGTTTTCC+GGG - chr3_1:18955107-18955126 Msa0351720:CDS 45.0%
TATTCGGAGGCTGCATAGAT+TGG + chr3_1:18955146-18955165 None:intergenic 45.0%
AATCTTGGAGTCCTTTCCAG+AGG - chr3_1:18955258-18955277 Msa0351720:CDS 45.0%
! AAGAAGACTCTCCTCTGGAA+AGG + chr3_1:18955272-18955291 None:intergenic 45.0%
GACAAAGTAGAAAGGGAGCT+TGG + chr3_1:18955386-18955405 None:intergenic 45.0%
GCTACTGATGCACGACCAAA+AGG - chr3_1:18952300-18952319 Msa0351720:CDS 50.0%
ATGAAGGTAGACTCACACCC+CGG - chr3_1:18952532-18952551 Msa0351720:CDS 50.0%
!! AGGTGCAGTTGGTAGTATCC+GGG + chr3_1:18952553-18952572 None:intergenic 50.0%
ACTACCAACTGCACCTTTGG+TGG - chr3_1:18952557-18952576 Msa0351720:CDS 50.0%
! TCATCCACCAAAGGTGCAGT+TGG + chr3_1:18952564-18952583 None:intergenic 50.0%
CATTGTAAACAAGCCGGGCA+AGG + chr3_1:18952713-18952732 None:intergenic 50.0%
ATCTCACCCGAGCAATTCTC+AGG - chr3_1:18952802-18952821 Msa0351720:CDS 50.0%
TCTCACCCGAGCAATTCTCA+GGG - chr3_1:18952803-18952822 Msa0351720:CDS 50.0%
CCGTTTAGCCATGGATCTTC+TGG - chr3_1:18952969-18952988 Msa0351720:CDS 50.0%
CATCAATCATGGGATCCACC+CGG - chr3_1:18953030-18953049 Msa0351720:CDS 50.0%
AAATGCGACGCGTCCGTTTA+GGG + chr3_1:18953650-18953669 None:intergenic 50.0%
! AGTCTGATGGTAGAAGCGCA+GGG - chr3_1:18953738-18953757 Msa0351720:CDS 50.0%
CTACGAGATTGCAACCAGAG+AGG + chr3_1:18953845-18953864 None:intergenic 50.0%
! TTTGTTGTGGGAAAGCAGCG+TGG - chr3_1:18954125-18954144 Msa0351720:intron 50.0%
GCGGAACTCAACCATCTTCA+AGG - chr3_1:18954167-18954186 Msa0351720:CDS 50.0%
TTTGTTGCCGCAACATCAGC+GGG + chr3_1:18954230-18954249 None:intergenic 50.0%
!! CTTTGATGGTTAGCCTCACG+AGG + chr3_1:18954373-18954392 None:intergenic 50.0%
CCTGCCTCGGTATTCTTTGA+TGG + chr3_1:18954387-18954406 None:intergenic 50.0%
CCATCAAAGAATACCGAGGC+AGG - chr3_1:18954384-18954403 Msa0351720:intron 50.0%
GAGGCAGGAGCTTTCCAAAT+TGG - chr3_1:18954399-18954418 Msa0351720:intron 50.0%
TGTTCCCAGTTACCACCACT+TGG - chr3_1:18954470-18954489 Msa0351720:CDS 50.0%
GTTCCCAGTTACCACCACTT+GGG - chr3_1:18954471-18954490 Msa0351720:CDS 50.0%
CTTTCCATTTCAGGCTGCGA+TGG - chr3_1:18954515-18954534 Msa0351720:CDS 50.0%
!! AGAAGGAAGGTGTTGAGGCA+GGG + chr3_1:18954714-18954733 None:intergenic 50.0%
!! AAGAAGGAAGGTGTTGAGGC+AGG + chr3_1:18954715-18954734 None:intergenic 50.0%
GGGTCATCCTTTGTGGATCT+CGG - chr3_1:18954864-18954883 Msa0351720:CDS 50.0%
GGTCATCCTTTGTGGATCTC+GGG - chr3_1:18954865-18954884 Msa0351720:CDS 50.0%
CAATGACCCGAGATCCACAA+AGG + chr3_1:18954874-18954893 None:intergenic 50.0%
GTGCAGTGCAAAAGGCAATG+AGG + chr3_1:18955047-18955066 None:intergenic 50.0%
CCGGAAAACGATTCTAGCCA+TGG + chr3_1:18955109-18955128 None:intergenic 50.0%
GATGGAAGAAGACTCTCCTC+TGG + chr3_1:18955277-18955296 None:intergenic 50.0%
!! GGTGCAGTTGGTAGTATCCG+GGG + chr3_1:18952552-18952571 None:intergenic 55.0%
TGGGTAAGACAACCCTTGCC+CGG - chr3_1:18952697-18952716 Msa0351720:CDS 55.0%
CAAATGCGACGCGTCCGTTT+AGG + chr3_1:18953651-18953670 None:intergenic 55.0%
CTAAACGGACGCGTCGCATT+TGG - chr3_1:18953649-18953668 Msa0351720:CDS 55.0%
! CAGTCTGATGGTAGAAGCGC+AGG - chr3_1:18953737-18953756 Msa0351720:CDS 55.0%
! ATGGTAGAAGCGCAGGGTTG+TGG - chr3_1:18953744-18953763 Msa0351720:CDS 55.0%
! TTGCAGGTGTTGTCCCTCTC+TGG - chr3_1:18953828-18953847 Msa0351720:CDS 55.0%
CTGCCCAAGTGGTGGTAACT+GGG + chr3_1:18954477-18954496 None:intergenic 55.0%
ACTGCCCAAGTGGTGGTAAC+TGG + chr3_1:18954478-18954497 None:intergenic 55.0%
AGAGAGTGGAACTGCCCAAG+TGG + chr3_1:18954488-18954507 None:intergenic 55.0%
GTGAACGCGTGCAGTGCAAA+AGG + chr3_1:18955055-18955074 None:intergenic 55.0%
! GGCTAGAATCGTTTTCCGGG+AGG - chr3_1:18955110-18955129 Msa0351720:CDS 55.0%
CGGAGGCTGCATAGATTGGA+GGG + chr3_1:18955142-18955161 None:intergenic 55.0%
TCGGAGGCTGCATAGATTGG+AGG + chr3_1:18955143-18955162 None:intergenic 55.0%
TGATGGCTTCGAGAGAGGAG+TGG - chr3_1:18955182-18955201 Msa0351720:CDS 55.0%
GATGGCTTCGAGAGAGGAGT+GGG - chr3_1:18955183-18955202 Msa0351720:CDS 55.0%
ATGGCTTCGAGAGAGGAGTG+GGG - chr3_1:18955184-18955203 Msa0351720:CDS 55.0%
CTGGCAAGCTGTCGAGACAA+GGG + chr3_1:18955352-18955371 None:intergenic 55.0%
TCTGGCAAGCTGTCGAGACA+AGG + chr3_1:18955353-18955372 None:intergenic 55.0%
TCTCGACAGCTTGCCAGAAG+AGG - chr3_1:18955355-18955374 Msa0351720:CDS 55.0%
CTCGACAGCTTGCCAGAAGA+GGG - chr3_1:18955356-18955375 Msa0351720:CDS 55.0%
GAGCTTGGTAGACCCTCTTC+TGG + chr3_1:18955371-18955390 None:intergenic 55.0%
GAGTGGAACTGCCCAAGTGG+TGG + chr3_1:18954485-18954504 None:intergenic 60.0%
ATTGGAGGGCAGCTGCCTCC+CGG + chr3_1:18955128-18955147 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 18952051 18955414 18952051 ID=Msa0351720;Name=Msa0351720
chr3_1 mRNA 18952051 18955414 18952051 ID=Msa0351720-mRNA-1;Parent=Msa0351720;Name=Msa0351720-mRNA-1;_AED=0.04;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|1063
chr3_1 exon 18954440 18955414 18954440 ID=Msa0351720-mRNA-1:exon:4469;Parent=Msa0351720-mRNA-1
chr3_1 exon 18954158 18954340 18954158 ID=Msa0351720-mRNA-1:exon:4468;Parent=Msa0351720-mRNA-1
chr3_1 exon 18952051 18954084 18952051 ID=Msa0351720-mRNA-1:exon:4467;Parent=Msa0351720-mRNA-1
chr3_1 CDS 18954440 18955414 18954440 ID=Msa0351720-mRNA-1:cds;Parent=Msa0351720-mRNA-1
chr3_1 CDS 18954158 18954340 18954158 ID=Msa0351720-mRNA-1:cds;Parent=Msa0351720-mRNA-1
chr3_1 CDS 18952051 18954084 18952051 ID=Msa0351720-mRNA-1:cds;Parent=Msa0351720-mRNA-1
Gene Sequence

>Msa0351720

ATGGCAGGGGTTGTTGGTGGTGCATTTCTTTCGTCTGTCTTTCAAGTGATTCGAGAGAGGTTGGCTTCTCGAGATTTCAGAGACTACTTCCATGAAAGTCTGTGGAAAAAACTTGAAATCACACTCGATTCTATCAATCAAGTACTGGATGATGCAGATATAAAGGAGTACCAACACCGAAACGTGAAGAATTGGCTTGATGATCTCAAACATGATGTATACGAATTAGAGCAACTATTCGATGTGATTGCTACTGATGCACGACCAAAAGGCAAGATGCGAAGCTTTCTTTCGCTTTTTATTAAGCAAGGATTTGAAGATAGGATTGAAGCATTGATACAGAACCTAGAGTTTCTTGCTGATCAAAAGGATAGATTGGGAATTGACAAATTCAGTAGTGGTGATTGTGAAATTGGAGTCTTGAAATTGTTAAGAGAATTTAGAGCTGTATCGAAAAGTTGTTATGCCATATTTGGTAGTAATGAAGGTAGACTCACACCCCGGATACTACCAACTGCACCTTTGGTGGATGAATCTGCGATATATGGTAGAGAGAACGAAAAGGAGAAAATAATTGAATTTTTACGTTCAGACAGTCATGGTGACAACCTTGTACGCATAATCAGTATAATGAGTGTGATTGGGATGGGTAAGACAACCCTTGCCCGGCTTGTTTACAATGACCACAAGATACATGAGCAATTTGAACTTAAAGCTTGGGTCTATGTTTCAAAATCTTTTGATCTTGTTCATCTCACCCGAGCAATTCTCAGGGAATTTCATTCTTCAGAAGCGTATAGTGAAGACTTGGAAATACTCCAACGACAATTGCAACAGAGACTAGCTGGCAAGAAGTACTTGCTTGTTTTAGACGATATCTGTAACGGGAATGTGGAATGTTGGAAGAAGCTACTACTTCCGTTTAGCCATGGATCTTCTGGAAGTAAGATTATTGTGACAACGCATGACAAGGAAAATATATCTGAATATCCAAATCTTGAGTTGATCGGCAAGAAAATAGTAGAAAAGTGCGGGGGGTTACCTTTAGCTCTAGAAACATTGGGGCAATTCTTGCAAAACAAATTTTATGAAACTGAATGGATTAAAATATTGGAGACTGATATGTGGCGTTTATCAGACGGGGACAACATTAACCCCGGCTATGAGTTTGAGAAGAGTGAGTTAATCAAGCTTTGGATGGCTGAAGGCTTGCTAAAGTATCGGGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTCAATTATCTAGTGTCAATATCGTTTTTCCAACAATCAGTAACTATGCCATTATGGGATGGTAAGTACTACTTCATCATGAATGATCTTGTCAATGATTTAGCAAAATCAGTGTCAGGAGAGTTCCGCTTACTAATAGAGGGTGGTAATGTGCAAGAAATCCCTAAACGGACGCGTCGCATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAGATCATATTCTTAAAATTAAGGGACTACACAGTCTGATGGTAGAAGCGCAGGGTTGTGGTGACCAACGCTTTAAGATAAGCCCAAGGGTACAGAAAAATTTGTTTTCAAGACTAAAATATTTGCAGGTGTTGTCCCTCTCTGGTTGCAATCTCGTAGAGCTAGACGACGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTCACACTGAGATTGCAAGCTTACCCAATTCCATTTGTATGCTGTATAATTTGCAAACACTCTTGTTAGAACAATGTTTCAAATTGGCTGAGCTCCCTTCAGATTTTTGCAAACTCATCAATTTACGTCATCTTAATCTGAAAGGCACTCATATTAAGAAGATGCCACCGAATATAAGTAGGTTAAAAAATCTTGAGATGCTGACTGATTTTGTTGTGGGAAAGCAGCGTGGATTTGACATTAAACAGTTGGCGGAACTCAACCATCTTCAAGGAAGGCTTCAAATTTCAGGGTTGGATAATGTTATTGATCCCGCTGATGTTGCGGCAACAAATTTGGAAGAAAAAGAACATTTAGAAGAATTAAGCATGTCATATGATGAATGGAGAGAAATGGATGGATCAGTAACTGAAACACATCTCTCTGTCTTAGAGGCTCTTCAACCAAATAGAAACCTCGTGAGGCTAACCATCAAAGAATACCGAGGCAGGAGCTTTCCAAATTGGCTTGGGGATTGTAATTTAGTATCTCTAGAATTGTTAGGATGTAAACTTTGTTCCCAGTTACCACCACTTGGGCAGTTCCACTCTCTCAAGAAGCTTTCCATTTCAGGCTGCGATGGAATAGAGATTATAGGTACAATGATTTCTGGCTATAATTCATCAAATGTTCCATTTAGATCCCTTGAAACTTTGCGATTTGAGCACATGTCAGAATGGAAGGAATGGTTATGTCTTGAATGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCGAAGTTGAAAAGTTCCCTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAAATTATTGATTGCCAAGAATTGCAGGCTTCAATTCCCAAGGCTGATAATATCAGTGACCTAGAACTAAAGAGATGTGATGGCGTTTTAATAAATGAATTGCCATCTAGCTTGAAAAGGGTCATCCTTTGTGGATCTCGGGTCATTGAATCCGCCCTAGAGAAAATTCTATTTAACAGTGCTTTTCTTGAAAAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTACAATGGTCCTCTTCGGATATGTGTAGCTGTAATTCTCTTCGCAGTCTAACTATAACATGTTGGCACTCTTCCTCATTGCCTTTTGCACTGCACGCGTTCACCAATCTTCATTCTCTCATGTTGTACGATAGTCCATGGCTAGAATCGTTTTCCGGGAGGCAGCTGCCCTCCAATCTATGCAGCCTCCGAATAGAAAGATGTCCTAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAATTCAGTGTTAGTGATGATTTTGAAATCTTGGAGTCCTTTCCAGAGGAGAGTCTTCTTCCATCAACTATTAAATCTCGAGTTAACAAATTGTTCCAACCTATGAATAATAAACTGCCCTTGTCTCGACAGCTTGCCAGAAGAGGGTCTACCAAGCTCCCTTTCTACTTTGTCCATTCATGA

Protein sequence

>Msa0351720

MAGVVGGAFLSSVFQVIRERLASRDFRDYFHESLWKKLEITLDSINQVLDDADIKEYQHRNVKNWLDDLKHDVYELEQLFDVIATDARPKGKMRSFLSLFIKQGFEDRIEALIQNLEFLADQKDRLGIDKFSSGDCEIGVLKLLREFRAVSKSCYAIFGSNEGRLTPRILPTAPLVDESAIYGRENEKEKIIEFLRSDSHGDNLVRIISIMSVIGMGKTTLARLVYNDHKIHEQFELKAWVYVSKSFDLVHLTRAILREFHSSEAYSEDLEILQRQLQQRLAGKKYLLVLDDICNGNVECWKKLLLPFSHGSSGSKIIVTTHDKENISEYPNLELIGKKIVEKCGGLPLALETLGQFLQNKFYETEWIKILETDMWRLSDGDNINPGYEFEKSELIKLWMAEGLLKYRGRDKSEEELGNEFFNYLVSISFFQQSVTMPLWDGKYYFIMNDLVNDLAKSVSGEFRLLIEGGNVQEIPKRTRRIWCCLDLEDGDRKLDHILKIKGLHSLMVEAQGCGDQRFKISPRVQKNLFSRLKYLQVLSLSGCNLVELDDEIRNLKLLRYLDLSHTEIASLPNSICMLYNLQTLLLEQCFKLAELPSDFCKLINLRHLNLKGTHIKKMPPNISRLKNLEMLTDFVVGKQRGFDIKQLAELNHLQGRLQISGLDNVIDPADVAATNLEEKEHLEELSMSYDEWREMDGSVTETHLSVLEALQPNRNLVRLTIKEYRGRSFPNWLGDCNLVSLELLGCKLCSQLPPLGQFHSLKKLSISGCDGIEIIGTMISGYNSSNVPFRSLETLRFEHMSEWKEWLCLECFPLLQELCIKHCPKLKSSLPQHLPSLQKLEIIDCQELQASIPKADNISDLELKRCDGVLINELPSSLKRVILCGSRVIESALEKILFNSAFLEKLEVEDFFGPNLQWSSSDMCSCNSLRSLTITCWHSSSLPFALHAFTNLHSLMLYDSPWLESFSGRQLPSNLCSLRIERCPKLMASREEWGLFQLNSLKQFSVSDDFEILESFPEESLLPSTIKSRVNKLFQPMNNKLPLSRQLARRGSTKLPFYFVHS*