AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183960 MtrunA17_Chr1g0207911 95.122 82 4 0 1 82 1 82 1.51e-51 168
Msa0183960 MtrunA17_Chr1g0207831 96.296 81 3 0 1 81 1 81 3.63e-49 167
Msa0183960 MtrunA17_Chr1g0207831 91.250 80 7 0 80 159 394 473 9.91e-43 150
Msa0183960 MtrunA17_Chr5g0443111 73.750 80 20 1 144 222 277 356 1.28e-33 124
Msa0183960 MtrunA17_Chr1g0207931 55.769 104 45 1 1 103 85 188 1.27e-28 113
Msa0183960 MtrunA17_Chr1g0207931 65.789 76 25 1 80 155 429 503 4.33e-23 97.4
Msa0183960 MtrunA17_Chr1g0207881 57.944 107 34 3 53 151 283 386 1.19e-27 108
Msa0183960 MtrunA17_Chr1g0207881 64.557 79 24 1 1 79 1 75 2.04e-24 100
Msa0183960 MtrunA17_Chr1g0207951 72.000 75 18 1 80 154 504 575 1.55e-27 110
Msa0183960 MtrunA17_Chr1g0207951 62.500 80 30 0 4 83 120 199 1.50e-25 105
Msa0183960 MtrunA17_Chr1g0207951 56.471 85 37 0 4 88 652 736 3.61e-25 103
Msa0183960 MtrunA17_Chr1g0207951 64.935 77 24 2 80 155 1040 1114 2.44e-23 98.6
Msa0183960 MtrunA17_Chr8g0365811 60.494 81 32 0 4 84 5 85 3.26e-27 109
Msa0183960 MtrunA17_Chr8g0365811 58.228 79 33 0 6 84 493 571 3.80e-26 106
Msa0183960 MtrunA17_Chr8g0365811 63.750 80 28 1 80 159 889 967 1.46e-22 96.3
Msa0183960 MtrunA17_Chr8g0365811 66.667 69 22 1 82 150 409 476 3.52e-14 71.6
Msa0183960 MtrunA17_Chr3g0098111 60.000 85 34 0 4 88 5 89 9.57e-27 107
Msa0183960 MtrunA17_Chr3g0098111 71.053 76 21 1 80 155 401 475 1.91e-26 106
Msa0183960 MtrunA17_Chr1g0207971 67.089 79 22 1 1 79 1 75 2.46e-26 106
Msa0183960 MtrunA17_Chr1g0207971 69.863 73 19 1 80 152 387 456 6.45e-24 99.4
Msa0183960 MtrunA17_Chr1g0161351 55.556 90 39 1 7 95 36 125 4.68e-24 100
Msa0183960 MtrunA17_Chr1g0161351 79.167 72 14 1 80 151 429 499 1.02e-21 93.6
Msa0183960 MtrunA17_Chr1g0207861 53.535 99 43 2 9 105 9 106 1.14e-23 99.0
Msa0183960 MtrunA17_Chr1g0207861 74.026 77 19 1 80 156 400 475 2.33e-22 95.1
Msa0183960 MtrunA17_Chr5g0393591 51.471 68 33 0 9 76 18 85 4.48e-15 73.9
Msa0183960 MtrunA17_Chr5g0393591 36.585 123 70 2 38 153 318 439 1.66e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183960 AT3G21560.1 52.632 76 36 0 6 81 10 85 2.55e-21 92.8
Msa0183960 AT3G21560.1 40.952 105 51 3 53 149 371 472 9.14e-13 67.8
Msa0183960 AT4G15480.1 53.521 71 33 0 5 75 16 86 2.63e-18 84.0
Msa0183960 AT4G15480.1 36.667 120 64 2 35 149 366 478 9.73e-15 73.6
Msa0183960 AT4G15490.1 55.405 74 32 1 9 81 9 82 2.17e-17 81.3
Msa0183960 AT4G15490.1 44.872 78 41 2 82 158 400 476 4.12e-12 65.9
Msa0183960 AT4G15500.1 57.971 69 28 1 9 76 10 78 2.61e-17 80.9
Msa0183960 AT4G15500.1 44.444 81 40 3 82 159 396 474 9.10e-13 67.8
Msa0183960 AT1G05560.2 52.239 67 30 2 93 159 446 510 4.13e-11 62.8
Msa0183960 AT1G05560.1 52.239 67 30 2 93 159 396 460 4.49e-11 62.8

Find 78 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCTCCATGTCAGCACTTC+TGG 0.193633 1_4:-73069032 None:intergenic
CTTCCGTTGGACTTGGAATC+TGG 0.197941 1_4:-73069095 None:intergenic
TGAGGTGAAGAAGTGCTTAT+TGG 0.236956 1_4:+73062487 Msa0183960:CDS
AAGCTAGAAGCACCTATTTC+AGG 0.257401 1_4:+73069151 Msa0183960:three_prime_UTR
TGCCGTCAGCTTATTTGTTA+TGG 0.270136 1_4:+73066940 Msa0183960:CDS
TTTGGGACAGGAATTAAAAT+AGG 0.311257 1_4:+73062425 Msa0183960:intron
TTGGATTGTAAATGATAAAT+TGG 0.318370 1_4:+73062454 Msa0183960:CDS
TGCTTATTGGAAGCAACAAC+TGG 0.334367 1_4:+73062500 Msa0183960:CDS
ATGGTTCATATATACCTATT+TGG 0.336252 1_4:+73069288 Msa0183960:three_prime_UTR
AGAGACAAGGAGGAGCTTAA+TGG 0.357032 1_4:-73061265 None:intergenic
ATTCCTTCTTCCGTTGGACT+TGG 0.359864 1_4:-73069102 None:intergenic
TGCAAATGAGGCAGCCAAAT+AGG 0.386096 1_4:-73069302 None:intergenic
GAGACAAGGAGGAGCTTAAT+GGG 0.398246 1_4:-73061264 None:intergenic
TGATACAAGTTCAAAGAATC+AGG 0.408119 1_4:+73067085 Msa0183960:CDS
GAAGAAGGCGGAGGAAGCTT+TGG 0.420316 1_4:+73062565 Msa0183960:CDS
CCTTTGATTCCTTCTTCCGT+TGG 0.420720 1_4:-73069108 None:intergenic
TTACATCAAATTCATGGAGC+TGG 0.425019 1_4:+73069252 Msa0183960:three_prime_UTR
GAGGAAGCTTTGGCCGTTGG+TGG 0.436155 1_4:+73062575 Msa0183960:CDS
TCGGAATCTTGATGAGTTCA+TGG 0.441506 1_4:+73062607 Msa0183960:CDS
TGGGTACCTTGACCTGAAAT+AGG 0.443400 1_4:-73069163 None:intergenic
GCTTCTAGCTTTGTGATCCA+TGG 0.445339 1_4:-73069139 None:intergenic
AGCCACGTCGACGAGGCATC+TGG 0.457577 1_4:+73067035 Msa0183960:CDS
CATGCACTGGTTTGCAAATG+AGG 0.461112 1_4:-73069314 None:intergenic
GCTTTCGAGTTCTTTGATGA+TGG 0.463288 1_4:+73061453 Msa0183960:CDS
GACAAAGTAGCAACTCCAAT+TGG 0.473853 1_4:+73061417 Msa0183960:CDS
TGGTTTATGTGTCCTTGTGC+TGG 0.475863 1_4:-73061291 None:intergenic
CATCTGGCTCAAACCATCCT+TGG 0.478607 1_4:+73067051 Msa0183960:CDS
AGGAAAATACCTTGCTGCAA+AGG 0.482858 1_4:+73061326 Msa0183960:CDS
GAATTAAAATAGGTAGTGGT+TGG 0.482993 1_4:+73062435 Msa0183960:CDS
GCGGAGGAAGCTTTGGCCGT+TGG 0.485293 1_4:+73062572 Msa0183960:CDS
GGAAAATACCTTGCTGCAAA+GGG 0.485937 1_4:+73061327 Msa0183960:CDS
GCAAAAGTACCATCACCAAT+TGG 0.487301 1_4:-73061432 None:intergenic
ATTCCAAGTCCAACGGAAGA+AGG 0.497537 1_4:+73069099 Msa0183960:three_prime_UTR
TCCTGAAAACTATCAATGCC+TGG 0.504428 1_4:-73066984 None:intergenic
GGACACATAAACCATCTTGT+TGG 0.513216 1_4:+73061300 Msa0183960:CDS
AAGGCCAAACCATCACCATC+TGG 0.514473 1_4:-73061480 None:intergenic
TGCTGACATGGAGACGCAAA+AGG 0.529966 1_4:+73069039 Msa0183960:CDS
ATAAACCATCTTGTTGGTCT+AGG 0.534862 1_4:+73061306 Msa0183960:CDS
ACAGGAATTAAAATAGGTAG+TGG 0.536673 1_4:+73062431 Msa0183960:intron
ATTATGAAATACTCATGCAC+TGG 0.538263 1_4:-73069327 None:intergenic
GCTCAAACCATCCTTGGTCA+TGG 0.540445 1_4:+73067057 Msa0183960:CDS
ATTAGAGAAATGCTGCCTCC+AGG 0.541414 1_4:+73066966 Msa0183960:CDS
TAATGCCAGAAGTGCTGACA+TGG 0.543202 1_4:+73069027 Msa0183960:CDS
CATGAATTTGATGTAAAATG+AGG 0.554440 1_4:-73069245 None:intergenic
ATGAAAGTATATGTTCCTCC+TGG 0.558607 1_4:-73067011 None:intergenic
GCAGTTATCATAACTCGCAC+TGG 0.561912 1_4:-73069223 None:intergenic
CAGTAGTCCATGACCAAGGA+TGG 0.570201 1_4:-73067064 None:intergenic
GCTTATTGGAAGCAACAACT+GGG 0.570415 1_4:+73062501 Msa0183960:CDS
TGCAAACAAGTGGAAGAAGA+AGG 0.576172 1_4:+73062550 Msa0183960:CDS
CCGTTGGTGGATCCTCTGAT+CGG 0.578196 1_4:+73062588 Msa0183960:CDS
GAAGCACCTATTTCAGGTCA+AGG 0.578391 1_4:+73069157 Msa0183960:three_prime_UTR
CTCATCAAGATTCCGATCAG+AGG 0.578971 1_4:-73062600 None:intergenic
ATCCATAACAAATAAGCTGA+CGG 0.586640 1_4:-73066942 None:intergenic
CCAACGGAAGAAGGAATCAA+AGG 0.589741 1_4:+73069108 Msa0183960:three_prime_UTR
TTCAGCACAACAGAGACGGC+TGG 0.599179 1_4:+73061363 Msa0183960:CDS
AAAATGGCGCATTCACTGGT+GGG 0.601912 1_4:-73069182 None:intergenic
TGAAGCAAAATGCAAACAAG+TGG 0.603058 1_4:+73062540 Msa0183960:CDS
CAGTGGCACCCTTTGCAGCA+AGG 0.603274 1_4:-73061335 None:intergenic
GTAGCAACTCCAATTGGTGA+TGG 0.622872 1_4:+73061423 Msa0183960:CDS
TTTGATGATGGTGTACCAGA+TGG 0.624683 1_4:+73061465 Msa0183960:CDS
TAAATTGGTAACAAGAGATG+AGG 0.625134 1_4:+73062469 Msa0183960:CDS
AGCCAGATGCCTCGTCGACG+TGG 0.626220 1_4:-73067037 None:intergenic
AATCAAAGGAAGTAAAACCA+TGG 0.626867 1_4:+73069122 Msa0183960:three_prime_UTR
CAAGTGGAAGAAGAAGGCGG+AGG 0.637922 1_4:+73062556 Msa0183960:CDS
TATCTTCAGCACAACAGAGA+CGG 0.646837 1_4:+73061359 Msa0183960:CDS
CATCCAGATTCCAAGTCCAA+CGG 0.647763 1_4:+73069092 Msa0183960:three_prime_UTR
CTTGTGCTGGAAAAGAGACA+AGG 0.649441 1_4:-73061278 None:intergenic
TTTCATCAGCCACGTCGACG+AGG 0.653428 1_4:+73067028 Msa0183960:CDS
AGCTGGATCAGAGTTTGTGA+TGG 0.661754 1_4:+73069269 Msa0183960:three_prime_UTR
CCGATCAGAGGATCCACCAA+CGG 0.671965 1_4:-73062588 None:intergenic
GATGGTGTACCAGATGGTGA+TGG 0.679960 1_4:+73061471 Msa0183960:CDS
TGTTTCAGGATCGAAGACGC+AGG 0.683180 1_4:+73068999 Msa0183960:intron
GTGCTGGAAAAGAGACAAGG+AGG 0.705172 1_4:-73061275 None:intergenic
GTATCAGTAGTCCATGACCA+AGG 0.705292 1_4:-73067068 None:intergenic
CTTATTGGAAGCAACAACTG+GGG 0.712429 1_4:+73062502 Msa0183960:CDS
AAACAAGTGGAAGAAGAAGG+CGG 0.728169 1_4:+73062553 Msa0183960:CDS
TGAAAACTATCAATGCCTGG+AGG 0.748198 1_4:-73066981 None:intergenic
TGTTGTGCTGAAGATAACAG+TGG 0.758469 1_4:-73061352 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAATTATTTTTTTCCA+TGG + chr1_4:73061607-73061626 Msa0183960:intron 10.0%
!!! AAATAATTATTTTTTTCCAT+GGG + chr1_4:73061608-73061627 Msa0183960:intron 10.0%
!! AAAATAAGATTAAAATAAAG+AGG - chr1_4:73062974-73062993 None:intergenic 10.0%
!!! TAAAAAAATTCAAATTTTGT+TGG + chr1_4:73063494-73063513 Msa0183960:intron 10.0%
!! ATTACACAATTTAAATATAT+TGG + chr1_4:73064349-73064368 Msa0183960:intron 10.0%
!!! CATTTTTTTACTTTTTTTTA+AGG - chr1_4:73064540-73064559 None:intergenic 10.0%
!!! AAAAAGAAATTCAAATTTTA+TGG - chr1_4:73066262-73066281 None:intergenic 10.0%
!! TTAATATCGTTTAATATTTA+TGG - chr1_4:73066491-73066510 None:intergenic 10.0%
!! TAAATATTAAACGATATTAA+AGG + chr1_4:73066491-73066510 Msa0183960:intron 10.0%
!!! TTGATCATTTATTATTTTAT+AGG + chr1_4:73066771-73066790 Msa0183960:intron 10.0%
!!! GAAAATATTTTTATTATTTC+GGG - chr1_4:73067777-73067796 None:intergenic 10.0%
!! TATTTAAAAAAAATCTTCAA+CGG - chr1_4:73067815-73067834 None:intergenic 10.0%
!!! TTGAAGATTTTTTTTAAATA+TGG + chr1_4:73067815-73067834 Msa0183960:intron 10.0%
!!! TATAATCTGTTTTTTAATTA+TGG + chr1_4:73068711-73068730 Msa0183960:intron 10.0%
!! TTATTTATGATACATGAAAA+TGG - chr1_4:73061594-73061613 None:intergenic 15.0%
!! AAGAATTGTAATGAAAAATA+AGG + chr1_4:73062802-73062821 Msa0183960:intron 15.0%
!!! TCAATTATAACTTTTTTCTA+TGG + chr1_4:73063302-73063321 Msa0183960:intron 15.0%
!!! ATTACTTTTGTTTTTTAAGT+TGG + chr1_4:73063377-73063396 Msa0183960:intron 15.0%
!! AAATTCATTCAAAAATTTGA+AGG + chr1_4:73063552-73063571 Msa0183960:intron 15.0%
!! AATTCATTCAAAAATTTGAA+GGG + chr1_4:73063553-73063572 Msa0183960:intron 15.0%
!! TATTTAAATTGTGTAATTTG+TGG - chr1_4:73064346-73064365 None:intergenic 15.0%
!! TTAGCAAGTAAAAAAAAAAA+AGG + chr1_4:73064506-73064525 Msa0183960:intron 15.0%
!!! ATCGTGATTAATTTTTTATA+AGG + chr1_4:73064663-73064682 Msa0183960:intron 15.0%
!!! ATCGTGATTAATTTTTTATA+AGG + chr1_4:73064663-73064682 Msa0183960:intron 15.0%
!! ATGAATCAATTATTAAATCT+TGG - chr1_4:73065007-73065026 None:intergenic 15.0%
!!! TTTGAAATCAATAAAACATA+TGG - chr1_4:73065130-73065149 None:intergenic 15.0%
!! CAAATAATGAAGAAATTAAA+AGG + chr1_4:73065212-73065231 Msa0183960:intron 15.0%
!! AGAAATTAAAAGGTTTAAAT+AGG + chr1_4:73065222-73065241 Msa0183960:intron 15.0%
!!! AATACTAGATTTGAAATTTT+TGG - chr1_4:73065502-73065521 None:intergenic 15.0%
!! AAAATTTCAAATCTAGTATT+TGG + chr1_4:73065502-73065521 Msa0183960:intron 15.0%
!! CAAATTCAAATTTCAAAATT+TGG - chr1_4:73066125-73066144 None:intergenic 15.0%
!! TGTTATCTAACTATAAATAT+AGG + chr1_4:73066359-73066378 Msa0183960:intron 15.0%
!! TGTATTATTATGATTATGAT+AGG - chr1_4:73067523-73067542 None:intergenic 15.0%
!!! AAAATAAAAAAGTATCTTAG+AGG - chr1_4:73067609-73067628 None:intergenic 15.0%
!! ACAATGGAAAAATTAAAATT+TGG - chr1_4:73067649-73067668 None:intergenic 15.0%
!!! TTATTGGAAAATTGTTTTTT+AGG + chr1_4:73067727-73067746 Msa0183960:intron 15.0%
!! TCAACTTAAATATCTTAAAA+TGG - chr1_4:73068954-73068973 None:intergenic 15.0%
!! TTTAAAAATCCAAATGCAAA+AGG + chr1_4:73061984-73062003 Msa0183960:intron 20.0%
!! ATGATGATAAAATTATAGAG+TGG + chr1_4:73062045-73062064 Msa0183960:intron 20.0%
!! AAATGAATGAAATTGTGTAT+GGG + chr1_4:73062138-73062157 Msa0183960:intron 20.0%
!! TTGGATTGTAAATGATAAAT+TGG + chr1_4:73062454-73062473 Msa0183960:CDS 20.0%
!!! AATTTTATTCCTGCATAATT+TGG + chr1_4:73062732-73062751 Msa0183960:intron 20.0%
!! AATGAAAAATAAGGAAGTTA+TGG + chr1_4:73062811-73062830 Msa0183960:intron 20.0%
!! ATGATAATATTAATCTCCTT+AGG + chr1_4:73063095-73063114 Msa0183960:intron 20.0%
!! TATTGTTATGAGAAAATCAT+CGG - chr1_4:73064030-73064049 None:intergenic 20.0%
!! AATTCATACGCTTATATATA+AGG - chr1_4:73064226-73064245 None:intergenic 20.0%
!! ATGAAATAATTCTACCTTAA+AGG + chr1_4:73064297-73064316 Msa0183960:intron 20.0%
!! ATAAGGATATTGAATAGTTA+CGG + chr1_4:73064716-73064735 Msa0183960:intron 20.0%
!!! TTTCTTTTACATATTTCTCT+CGG - chr1_4:73064977-73064996 None:intergenic 20.0%
!! ATCAATTATTAAATCTTGGA+TGG - chr1_4:73065003-73065022 None:intergenic 20.0%
!!! AATAAAACATATGGAGTTTT+TGG - chr1_4:73065121-73065140 None:intergenic 20.0%
!! ATAATATGCATACAAATGTT+GGG - chr1_4:73065903-73065922 None:intergenic 20.0%
!! TATAATATGCATACAAATGT+TGG - chr1_4:73065904-73065923 None:intergenic 20.0%
!!! ATGGTTTTTGTCTATATTAA+AGG + chr1_4:73066453-73066472 Msa0183960:intron 20.0%
!! TTTGTCTATATTAAAGGAAT+TGG + chr1_4:73066459-73066478 Msa0183960:intron 20.0%
!! TATTAAAGGATTATACTTGA+CGG + chr1_4:73066505-73066524 Msa0183960:intron 20.0%
!! ATCAGTAATCAAAATATCAA+AGG - chr1_4:73066872-73066891 None:intergenic 20.0%
!!! GACTTTTTTGTTAAATTGTT+AGG + chr1_4:73066909-73066928 Msa0183960:intron 20.0%
!! TCATAAATGCTTAAAATAGT+AGG - chr1_4:73067274-73067293 None:intergenic 20.0%
!! AATCATAATAATACATTCAG+TGG + chr1_4:73067528-73067547 Msa0183960:intron 20.0%
!! CATTAGACAAAAATAACATT+TGG + chr1_4:73067893-73067912 Msa0183960:intron 20.0%
!! CAACAAAAAATTACTGAAAA+AGG - chr1_4:73068487-73068506 None:intergenic 20.0%
!! TATCATTATTGAATAGCAAA+TGG - chr1_4:73068691-73068710 None:intergenic 20.0%
!!! TGTTTTTTAATTATGGCTAT+TGG + chr1_4:73068718-73068737 Msa0183960:intron 20.0%
!!! ACATTCCTTCTGTTTTAAAT+TGG + chr1_4:73061655-73061674 Msa0183960:intron 25.0%
!! TTAGTCCAATTTAAAACAGA+AGG - chr1_4:73061663-73061682 None:intergenic 25.0%
!! TATAAGGTTCTTCTTTTGTA+GGG - chr1_4:73061740-73061759 None:intergenic 25.0%
!! ATATAAGGTTCTTCTTTTGT+AGG - chr1_4:73061741-73061760 None:intergenic 25.0%
!!! TCTCGTTTTAGAAAAGTTTA+AGG + chr1_4:73061851-73061870 Msa0183960:intron 25.0%
!!! TAAAGTGTTTTGTGTATTAG+TGG + chr1_4:73061881-73061900 Msa0183960:intron 25.0%
! ATTTCATTCATTTGTTCTTG+AGG - chr1_4:73062131-73062150 None:intergenic 25.0%
! CAAATGAATGAAATTGTGTA+TGG + chr1_4:73062137-73062156 Msa0183960:intron 25.0%
!! AGAATTTTGCATTTGTAAGT+TGG - chr1_4:73062394-73062413 None:intergenic 25.0%
! ACTTACAAATGCAAAATTCT+TGG + chr1_4:73062394-73062413 Msa0183960:intron 25.0%
!!! AAATTCTTGGTTGATGTTTT+TGG + chr1_4:73062407-73062426 Msa0183960:intron 25.0%
!!! AATTCTTGGTTGATGTTTTT+GGG + chr1_4:73062408-73062427 Msa0183960:intron 25.0%
!!! ATGGAAAAGTATTTGGAATT+TGG + chr1_4:73062830-73062849 Msa0183960:intron 25.0%
!!! TACAGTTATTTTGAGGTTTA+AGG - chr1_4:73062912-73062931 None:intergenic 25.0%
!! TTAAAATAAAGAGGAAGTAC+AGG - chr1_4:73062965-73062984 None:intergenic 25.0%
!!! CTTTTGTTTTTTAAGTTGGA+AGG + chr1_4:73063381-73063400 Msa0183960:intron 25.0%
! CATAACTTGACTTAAAAACA+TGG + chr1_4:73063580-73063599 Msa0183960:intron 25.0%
!! TAATTTTTCATCTACACTCT+CGG - chr1_4:73063607-73063626 None:intergenic 25.0%
! AGAGTGTAGATGAAAAATTA+GGG + chr1_4:73063607-73063626 Msa0183960:intron 25.0%
! GCTTATATTCGATTTATCAA+AGG + chr1_4:73063961-73063980 Msa0183960:intron 25.0%
! TTTATCAAAGGATATGAATG+AGG + chr1_4:73063973-73063992 Msa0183960:intron 25.0%
! TTATCAAAGGATATGAATGA+GGG + chr1_4:73063974-73063993 Msa0183960:intron 25.0%
! ATAACAATATGATTGTACCA+AGG + chr1_4:73064041-73064060 Msa0183960:intron 25.0%
! CATAGTGTAAGAATATATCT+TGG + chr1_4:73064407-73064426 Msa0183960:intron 25.0%
! TATAGTAACAAGTGCTTTAA+AGG - chr1_4:73064578-73064597 None:intergenic 25.0%
! TAAGGATATTGAATAGTTAC+GGG + chr1_4:73064717-73064736 Msa0183960:intron 25.0%
! ATAACTGAGTTCATGAATTA+TGG - chr1_4:73064816-73064835 None:intergenic 25.0%
! TTTGTAACAGTTCATTACTT+GGG - chr1_4:73065196-73065215 None:intergenic 25.0%
! ATTTGTAACAGTTCATTACT+TGG - chr1_4:73065197-73065216 None:intergenic 25.0%
!! CAATCAAAATATGGTTTTTG+GGG - chr1_4:73065412-73065431 None:intergenic 25.0%
!! GCAATCAAAATATGGTTTTT+GGG - chr1_4:73065413-73065432 None:intergenic 25.0%
! TTAAATGAGCAAATTCTCAT+AGG + chr1_4:73065455-73065474 Msa0183960:intron 25.0%
! TAATATGCATACAAATGTTG+GGG - chr1_4:73065902-73065921 None:intergenic 25.0%
! TTAATTAAATGTTGTGAAGC+AGG - chr1_4:73066285-73066304 None:intergenic 25.0%
!! AGATAACAGACTTTATTTGA+TGG - chr1_4:73066347-73066366 None:intergenic 25.0%
!!! AAGTGATTTTAGAATGAGAA+AGG - chr1_4:73066407-73066426 None:intergenic 25.0%
! ATCGTTTAATATTTATGGAC+AGG - chr1_4:73066486-73066505 None:intergenic 25.0%
!!! ATCTTTTTCATCAAGTTCAT+TGG + chr1_4:73066574-73066593 Msa0183960:intron 25.0%
! GAAAGGAAACTAAACTTATA+GGG - chr1_4:73066619-73066638 None:intergenic 25.0%
! TGAAAGGAAACTAAACTTAT+AGG - chr1_4:73066620-73066639 None:intergenic 25.0%
! ATATGAACTTTAAATGCCAA+TGG - chr1_4:73066728-73066747 None:intergenic 25.0%
!! TGGCATTTAAAGTTCATATA+TGG + chr1_4:73066729-73066748 Msa0183960:intron 25.0%
!!! GATATTTTGATTACTGATCA+TGG + chr1_4:73066874-73066893 Msa0183960:intron 25.0%
!!! AAATACACAGCCTTTTTTTT+AGG + chr1_4:73067162-73067181 Msa0183960:intron 25.0%
! AGATACTAACTTATTGTTTG+GGG - chr1_4:73067226-73067245 None:intergenic 25.0%
! CAGATACTAACTTATTGTTT+GGG - chr1_4:73067227-73067246 None:intergenic 25.0%
! ACAGATACTAACTTATTGTT+TGG - chr1_4:73067228-73067247 None:intergenic 25.0%
! AAGTTAGTATCTGTTTGTAT+TGG + chr1_4:73067234-73067253 Msa0183960:intron 25.0%
!! ACTATTTTCATATAAGCTAC+AGG - chr1_4:73067363-73067382 None:intergenic 25.0%
! TAGGAAACTTAATATTCTAG+AGG - chr1_4:73067504-73067523 None:intergenic 25.0%
!! AATAATGCTTTTGGATAGTT+TGG - chr1_4:73067673-73067692 None:intergenic 25.0%
!!! ACTATCCAAAAGCATTATTT+TGG + chr1_4:73067674-73067693 Msa0183960:intron 25.0%
! TCATGTAATACAACTCTTAT+TGG + chr1_4:73067711-73067730 Msa0183960:intron 25.0%
!! ATCATCTAATTGCTCTATTT+TGG - chr1_4:73067846-73067865 None:intergenic 25.0%
! AGACAAAAATAACATTTGGA+AGG + chr1_4:73067897-73067916 Msa0183960:intron 25.0%
! TTCCTTGCAACAAATAATTA+GGG - chr1_4:73067956-73067975 None:intergenic 25.0%
! ATTCCTTGCAACAAATAATT+AGG - chr1_4:73067957-73067976 None:intergenic 25.0%
! ATGTAAATGTTGAAAGTTCA+GGG + chr1_4:73068168-73068187 Msa0183960:intron 25.0%
! TATGGATACTTAACACAATA+TGG + chr1_4:73068400-73068419 Msa0183960:intron 25.0%
! CAATATGGTACTTGATATTT+AGG + chr1_4:73068415-73068434 Msa0183960:intron 25.0%
!!! AACTATAAAAGTACTTATGC+AGG + chr1_4:73068449-73068468 Msa0183960:intron 25.0%
!! AAGAATTTGGTTAGACTTTT+TGG + chr1_4:73068754-73068773 Msa0183960:intron 25.0%
! GGAAAACAAAAGTGAAAATA+CGG - chr1_4:73068844-73068863 None:intergenic 25.0%
!!! TTTCACTTTTGTTTTCCATA+TGG + chr1_4:73068847-73068866 Msa0183960:intron 25.0%
! AATAAAGAGTTTGATGTTTC+AGG + chr1_4:73068985-73069004 Msa0183960:intron 25.0%
! CATGAATTTGATGTAAAATG+AGG - chr1_4:73069248-73069267 None:intergenic 25.0%
!! CTCATTTTACATCAAATTCA+TGG + chr1_4:73069246-73069265 Msa0183960:three_prime_UTR 25.0%
! ATGGTTCATATATACCTATT+TGG + chr1_4:73069288-73069307 Msa0183960:three_prime_UTR 25.0%
! CTGAGTTGAACATCAATATA+AGG - chr1_4:73061756-73061775 None:intergenic 30.0%
AGGAATTGAAATGGACAAAA+AGG - chr1_4:73061825-73061844 None:intergenic 30.0%
! AGATTAGCTAGGAATTGAAA+TGG - chr1_4:73061834-73061853 None:intergenic 30.0%
!! TTTCTAAAACGAGATTAGCT+AGG - chr1_4:73061845-73061864 None:intergenic 30.0%
! GCATTTGGATTTTTAAACGA+AGG - chr1_4:73061981-73062000 None:intergenic 30.0%
TTTATCATCATCATTGCTCT+TGG - chr1_4:73062036-73062055 None:intergenic 30.0%
! TGAAATTGTGTATGGGTTAT+TGG + chr1_4:73062145-73062164 Msa0183960:intron 30.0%
! TTTGGGACAGGAATTAAAAT+AGG + chr1_4:73062425-73062444 Msa0183960:intron 30.0%
ACAGGAATTAAAATAGGTAG+TGG + chr1_4:73062431-73062450 Msa0183960:intron 30.0%
! GAATTAAAATAGGTAGTGGT+TGG + chr1_4:73062435-73062454 Msa0183960:CDS 30.0%
! TAAATTGGTAACAAGAGATG+AGG + chr1_4:73062469-73062488 Msa0183960:CDS 30.0%
TTATTCCTGCATAATTTGGT+AGG + chr1_4:73062736-73062755 Msa0183960:intron 30.0%
!! GGAAGTTATGGAAAAGTATT+TGG + chr1_4:73062823-73062842 Msa0183960:intron 30.0%
!! ACATACGTACAGTTATTTTG+AGG - chr1_4:73062919-73062938 None:intergenic 30.0%
!! GAATAGGTTTAGCTTGATTA+AGG + chr1_4:73063121-73063140 Msa0183960:intron 30.0%
! GAGAGTGTAGATGAAAAATT+AGG + chr1_4:73063606-73063625 Msa0183960:intron 30.0%
GAGTGTAGATGAAAAATTAG+GGG + chr1_4:73063608-73063627 Msa0183960:intron 30.0%
AGTGTAGATGAAAAATTAGG+GGG + chr1_4:73063609-73063628 Msa0183960:intron 30.0%
AAACAAGTAAAAGATCGACA+GGG - chr1_4:73063684-73063703 None:intergenic 30.0%
AAAACAAGTAAAAGATCGAC+AGG - chr1_4:73063685-73063704 None:intergenic 30.0%
!!! TTTTCATCATTTGTTGTCTC+AGG + chr1_4:73063702-73063721 Msa0183960:intron 30.0%
AAAACGAAAATCAGACAACA+TGG - chr1_4:73063743-73063762 None:intergenic 30.0%
TTCTCGTTAACTTAATCAAG+TGG + chr1_4:73063771-73063790 Msa0183960:intron 30.0%
! CCATCTTTAAAGGAATAAAC+TGG - chr1_4:73063822-73063841 None:intergenic 30.0%
! CCAGTTTATTCCTTTAAAGA+TGG + chr1_4:73063819-73063838 Msa0183960:intron 30.0%
TGATATTGCTCCATCTTTAA+AGG - chr1_4:73063832-73063851 None:intergenic 30.0%
AAAGATGGAGCAATATCAAA+TGG + chr1_4:73063834-73063853 Msa0183960:intron 30.0%
ACTTTCCACAAAATATCTCT+AGG - chr1_4:73063919-73063938 None:intergenic 30.0%
AAGTCTTAGAGAAGAAAGTT+AGG + chr1_4:73063935-73063954 Msa0183960:intron 30.0%
AGTAAAATGATATGAGCGTA+AGG - chr1_4:73064072-73064091 None:intergenic 30.0%
ACTTTGTCTTACTTCTACTT+AGG - chr1_4:73064252-73064271 None:intergenic 30.0%
TTCTCTTTCGTCTTACATTA+TGG - chr1_4:73064377-73064396 None:intergenic 30.0%
AAATGTTAGATGAGATAGCA+CGG - chr1_4:73064449-73064468 None:intergenic 30.0%
CATGAATTATGGTCAACAAA+CGG - chr1_4:73064805-73064824 None:intergenic 30.0%
TCATGAACTCAGTTATCATA+AGG + chr1_4:73064820-73064839 Msa0183960:intron 30.0%
! AATTGATTCATTCTTAGCCT+AGG + chr1_4:73065016-73065035 Msa0183960:intron 30.0%
AACTCAGAAACGAATATGTA+CGG + chr1_4:73065151-73065170 Msa0183960:intron 30.0%
GGTTATCAAACAGAATATTC+GGG - chr1_4:73065277-73065296 None:intergenic 30.0%
GGGTTATCAAACAGAATATT+CGG - chr1_4:73065278-73065297 None:intergenic 30.0%
AGAAAAACAATGAAACCGAT+AGG + chr1_4:73065367-73065386 Msa0183960:intron 30.0%
! CGCAATCAAAATATGGTTTT+TGG - chr1_4:73065414-73065433 None:intergenic 30.0%
!!! AATTTTTGGTATTGTGCCTA+TGG - chr1_4:73065488-73065507 None:intergenic 30.0%
CAATAGTGAGTTTAGAAAAG+TGG - chr1_4:73065772-73065791 None:intergenic 30.0%
AATATGCATACAAATGTTGG+GGG - chr1_4:73065901-73065920 None:intergenic 30.0%
! ACTTACTCTAAAAGCCAATT+AGG + chr1_4:73065961-73065980 Msa0183960:intron 30.0%
GGGAAATTAGCAAAGAATTA+GGG - chr1_4:73066004-73066023 None:intergenic 30.0%
AGGGAAATTAGCAAAGAATT+AGG - chr1_4:73066005-73066024 None:intergenic 30.0%
TAAGCTTGGTAAATCACTTT+AGG - chr1_4:73066160-73066179 None:intergenic 30.0%
ATATTGAAATAGGAGGCAAA+TGG - chr1_4:73066226-73066245 None:intergenic 30.0%
TCTAACTATAAATATAGGCG+TGG + chr1_4:73066364-73066383 Msa0183960:intron 30.0%
AACCATTTCTTGAAATGAAC+AGG - chr1_4:73066439-73066458 None:intergenic 30.0%
CCAGGAAAAAATAAACTGAA+AGG - chr1_4:73066636-73066655 None:intergenic 30.0%
!!! CCTTTCAGTTTATTTTTTCC+TGG + chr1_4:73066633-73066652 Msa0183960:intron 30.0%
!!! TTTTTTCCTGGTTTCACTAA+TGG + chr1_4:73066645-73066664 Msa0183960:intron 30.0%
!! AAAGGAACACATTTTGATGA+AGG - chr1_4:73066854-73066873 None:intergenic 30.0%
ATCCATAACAAATAAGCTGA+CGG - chr1_4:73066945-73066964 None:intergenic 30.0%
TGATACAAGTTCAAAGAATC+AGG + chr1_4:73067085-73067104 Msa0183960:CDS 30.0%
TTAAGCATTTATGAGACTCA+TGG + chr1_4:73067280-73067299 Msa0183960:intron 30.0%
TAAGCATTTATGAGACTCAT+GGG + chr1_4:73067281-73067300 Msa0183960:intron 30.0%
CATAAGCGCTTATTATAGAA+GGG - chr1_4:73067431-73067450 None:intergenic 30.0%
ACATAAGCGCTTATTATAGA+AGG - chr1_4:73067432-73067451 None:intergenic 30.0%
!! TTTTGGATAGTTTGGAACAA+TGG - chr1_4:73067665-73067684 None:intergenic 30.0%
! TGGTTCCAAAATAATGCTTT+TGG - chr1_4:73067682-73067701 None:intergenic 30.0%
! GTATTACATGAGCATGTTTT+TGG - chr1_4:73067702-73067721 None:intergenic 30.0%
TTTGTCTAATGACACTAAGA+TGG - chr1_4:73067884-73067903 None:intergenic 30.0%
TGTACTGTGTTATGCTATTA+CGG - chr1_4:73067930-73067949 None:intergenic 30.0%
! AACCCTAATTATTTGTTGCA+AGG + chr1_4:73067951-73067970 Msa0183960:intron 30.0%
! TTAGTTTGAGATCAGTAATG+TGG - chr1_4:73068011-73068030 None:intergenic 30.0%
ATAAGTAAGAAGTGAAGAAG+AGG - chr1_4:73068071-73068090 None:intergenic 30.0%
ACTTATTTGTGAGAAAAGAG+TGG + chr1_4:73068085-73068104 Msa0183960:intron 30.0%
CATGTAAATGTTGAAAGTTC+AGG + chr1_4:73068167-73068186 Msa0183960:intron 30.0%
AACATTTGCAATGTATTCAG+GGG - chr1_4:73068230-73068249 None:intergenic 30.0%
CAACATTTGCAATGTATTCA+GGG - chr1_4:73068231-73068250 None:intergenic 30.0%
TGATATCTGCAATGAAAGAA+AGG - chr1_4:73068290-73068309 None:intergenic 30.0%
TTAAGCTAAGATCTCAATAC+TGG - chr1_4:73068557-73068576 None:intergenic 30.0%
CTTAAGAATAATTGTCTACC+TGG + chr1_4:73068572-73068591 Msa0183960:intron 30.0%
AGCAGCTTATTTCGTAATAA+AGG + chr1_4:73068635-73068654 Msa0183960:intron 30.0%
!!! CTTTTTGGTTTTTGCATTGA+AGG + chr1_4:73068769-73068788 Msa0183960:intron 30.0%
TTATTCAGTGACAGTTTCTT+TGG - chr1_4:73068902-73068921 None:intergenic 30.0%
AATCAAAGGAAGTAAAACCA+TGG + chr1_4:73069122-73069141 Msa0183960:three_prime_UTR 30.0%
TGCAAGAAAGAATGCAAAAA+TGG - chr1_4:73069201-73069220 None:intergenic 30.0%
! ATAAACCATCTTGTTGGTCT+AGG + chr1_4:73061306-73061325 Msa0183960:CDS 35.0%
! ATTTTCCTAGACCAACAAGA+TGG - chr1_4:73061314-73061333 None:intergenic 35.0%
GTGGACATAGTTATAGTAAG+TGG - chr1_4:73061703-73061722 None:intergenic 35.0%
!! TAGGGAAAGGTGTTAATTTG+TGG - chr1_4:73061722-73061741 None:intergenic 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG - chr1_4:73061910-73061929 None:intergenic 35.0%
TCAATCTCCATAAGAACTGT+TGG + chr1_4:73061954-73061973 Msa0183960:intron 35.0%
! ACGTAAACTACAGAACCTTT+TGG - chr1_4:73062083-73062102 None:intergenic 35.0%
! TCTGTAGTTTACGTCTCTTT+TGG + chr1_4:73062089-73062108 Msa0183960:intron 35.0%
! CTGTAGTTTACGTCTCTTTT+GGG + chr1_4:73062090-73062109 Msa0183960:intron 35.0%
!! ATTCTCAAGTCTCGTTTTTG+TGG + chr1_4:73062168-73062187 Msa0183960:intron 35.0%
TGAAGCAAAATGCAAACAAG+TGG + chr1_4:73062540-73062559 Msa0183960:CDS 35.0%
AAATTACCCTTATCCGTGTA+GGG - chr1_4:73062717-73062736 None:intergenic 35.0%
AAAATTACCCTTATCCGTGT+AGG - chr1_4:73062718-73062737 None:intergenic 35.0%
AACAGAGATAAGTGCAATAG+AGG - chr1_4:73062858-73062877 None:intergenic 35.0%
! ATAAAGAGGAAGTACAGGAA+AGG - chr1_4:73062960-73062979 None:intergenic 35.0%
TAATCTCCTTAGGCAAGAAT+AGG + chr1_4:73063105-73063124 Msa0183960:intron 35.0%
GTTGGAAGGTTAGCAAAATT+TGG + chr1_4:73063395-73063414 Msa0183960:intron 35.0%
GTGTAGATGAAAAATTAGGG+GGG + chr1_4:73063610-73063629 Msa0183960:intron 35.0%
!! TCATTTGTTGTCTCAGGTTA+AGG + chr1_4:73063708-73063727 Msa0183960:intron 35.0%
CGTTAACTTAATCAAGTGGT+TGG + chr1_4:73063775-73063794 Msa0183960:intron 35.0%
!! TTCCACAAATTTTAGGGGAT+GGG + chr1_4:73064000-73064019 Msa0183960:intron 35.0%
ATCTCAAGCTTTCACCTTTA+AGG - chr1_4:73064314-73064333 None:intergenic 35.0%
GAATATTCGGGTATTCGATT+TGG - chr1_4:73065265-73065284 None:intergenic 35.0%
AGCAGAAGAAGAATTAGTAG+CGG - chr1_4:73065299-73065318 None:intergenic 35.0%
ACTAATTCTTCTTCTGCTTC+TGG + chr1_4:73065301-73065320 Msa0183960:intron 35.0%
TCTGCTTCTGGTAAATCAAA+AGG + chr1_4:73065313-73065332 Msa0183960:intron 35.0%
!! CAAAATATGGTTTTTGGGGA+TGG - chr1_4:73065408-73065427 None:intergenic 35.0%
GTTGATGCGCAATCAAAATA+TGG - chr1_4:73065421-73065440 None:intergenic 35.0%
GTAGAGAGAATCTAACATTG+AGG - chr1_4:73065740-73065759 None:intergenic 35.0%
CTTTGGTTAAGTACTTTGGA+GGG - chr1_4:73066024-73066043 None:intergenic 35.0%
TCTTTGGTTAAGTACTTTGG+AGG - chr1_4:73066025-73066044 None:intergenic 35.0%
CACTCTTTGGTTAAGTACTT+TGG - chr1_4:73066028-73066047 None:intergenic 35.0%
AATGGGGACTCATTAAATGT+TGG + chr1_4:73066059-73066078 Msa0183960:intron 35.0%
! CTTGGTAAATCACTTTAGGA+GGG - chr1_4:73066156-73066175 None:intergenic 35.0%
!! GACTTTATTTGATGGTGCAT+GGG - chr1_4:73066339-73066358 None:intergenic 35.0%
!! AGACTTTATTTGATGGTGCA+TGG - chr1_4:73066340-73066359 None:intergenic 35.0%
AACTATAAATATAGGCGTGG+TGG + chr1_4:73066367-73066386 Msa0183960:intron 35.0%
GACCTGTTCATTTCAAGAAA+TGG + chr1_4:73066434-73066453 Msa0183960:intron 35.0%
AACTTACCATTAGTGAAACC+AGG - chr1_4:73066654-73066673 None:intergenic 35.0%
! ATTGACAGCTTTTCTACCAT+TGG + chr1_4:73066709-73066728 Msa0183960:intron 35.0%
TGATTACTGATCATGGCAAT+TGG + chr1_4:73066881-73066900 Msa0183960:intron 35.0%
! ATGAAAGTATATGTTCCTCC+TGG - chr1_4:73067014-73067033 None:intergenic 35.0%
AGCATGCAGTCCTAAAAAAA+AGG - chr1_4:73067175-73067194 None:intergenic 35.0%
AAGCATTTATGAGACTCATG+GGG + chr1_4:73067282-73067301 Msa0183960:intron 35.0%
GTTGTTTATCCAAACAGAGT+TGG + chr1_4:73067469-73067488 Msa0183960:intron 35.0%
TTCTTTACTCCAACTCTGTT+TGG - chr1_4:73067481-73067500 None:intergenic 35.0%
TGTTATGCTATTACGGGATT+GGG - chr1_4:73067923-73067942 None:intergenic 35.0%
GTACTGTGTTATGCTATTAC+GGG - chr1_4:73067929-73067948 None:intergenic 35.0%
! GGTGCAAAGAGAAATTTTCA+GGG + chr1_4:73068114-73068133 Msa0183960:intron 35.0%
GCAACATTTGCAATGTATTC+AGG - chr1_4:73068232-73068251 None:intergenic 35.0%
GAACAAATGTTCCAACGATA+TGG + chr1_4:73068370-73068389 Msa0183960:intron 35.0%
CATATCAAGTACCATATCGT+TGG - chr1_4:73068384-73068403 None:intergenic 35.0%
CAACGATATGGTACTTGATA+TGG + chr1_4:73068382-73068401 Msa0183960:intron 35.0%
CTAAGATCTCAATACTGGAA+AGG - chr1_4:73068552-73068571 None:intergenic 35.0%
TTTGTAAGCTCATCTGAAGA+GGG - chr1_4:73068609-73068628 None:intergenic 35.0%
ATTTGTAAGCTCATCTGAAG+AGG - chr1_4:73068610-73068629 None:intergenic 35.0%
CATAGGTAAGCATACAATCT+TGG + chr1_4:73068796-73068815 Msa0183960:intron 35.0%
! TCTTTGGACAGGAATTTTGA+AGG - chr1_4:73068886-73068905 None:intergenic 35.0%
TTACATCAAATTCATGGAGC+TGG + chr1_4:73069252-73069271 Msa0183960:three_prime_UTR 35.0%
GGACACATAAACCATCTTGT+TGG + chr1_4:73061300-73061319 Msa0183960:CDS 40.0%
AGGAAAATACCTTGCTGCAA+AGG + chr1_4:73061326-73061345 Msa0183960:CDS 40.0%
GGAAAATACCTTGCTGCAAA+GGG + chr1_4:73061327-73061346 Msa0183960:CDS 40.0%
TGTTGTGCTGAAGATAACAG+TGG - chr1_4:73061355-73061374 None:intergenic 40.0%
TATCTTCAGCACAACAGAGA+CGG + chr1_4:73061359-73061378 Msa0183960:CDS 40.0%
GACAAAGTAGCAACTCCAAT+TGG + chr1_4:73061417-73061436 Msa0183960:CDS 40.0%
!! GCAAAAGTACCATCACCAAT+TGG - chr1_4:73061435-73061454 None:intergenic 40.0%
!! GCTTTCGAGTTCTTTGATGA+TGG + chr1_4:73061453-73061472 Msa0183960:CDS 40.0%
!! TTTGATGATGGTGTACCAGA+TGG + chr1_4:73061465-73061484 Msa0183960:CDS 40.0%
TCAGAACTACGCTGAAATTG+AGG + chr1_4:73061512-73061531 Msa0183960:intron 40.0%
TTAGCAACATCAGAAACCCA+TGG - chr1_4:73061627-73061646 None:intergenic 40.0%
! GGTTCTTCTTTTGTAGGGAA+AGG - chr1_4:73061735-73061754 None:intergenic 40.0%
! TTGCTTGCTCCTTTTGCATT+TGG - chr1_4:73061996-73062015 None:intergenic 40.0%
AAAGGAGCAAGCAACATTCA+TGG + chr1_4:73062002-73062021 Msa0183960:intron 40.0%
TTGTGGTCATTAAGCAATCC+TGG + chr1_4:73062185-73062204 Msa0183960:intron 40.0%
!!! TGTTTTGCCTGATGGGTTTT+TGG + chr1_4:73062208-73062227 Msa0183960:intron 40.0%
GTTACGAAACATGCAACTGA+AGG - chr1_4:73062296-73062315 None:intergenic 40.0%
TCACTGGAAGCTCTTTCTTT+AGG + chr1_4:73062335-73062354 Msa0183960:intron 40.0%
CTTGATGGAAATGTCAACAC+TGG - chr1_4:73062365-73062384 None:intergenic 40.0%
! GTGTTGACATTTCCATCAAG+AGG + chr1_4:73062365-73062384 Msa0183960:intron 40.0%
!!! TTGGTTGATGTTTTTGGGAC+AGG + chr1_4:73062413-73062432 Msa0183960:intron 40.0%
!! TGAGGTGAAGAAGTGCTTAT+TGG + chr1_4:73062487-73062506 Msa0183960:CDS 40.0%
TGCTTATTGGAAGCAACAAC+TGG + chr1_4:73062500-73062519 Msa0183960:CDS 40.0%
GCTTATTGGAAGCAACAACT+GGG + chr1_4:73062501-73062520 Msa0183960:CDS 40.0%
CTTATTGGAAGCAACAACTG+GGG + chr1_4:73062502-73062521 Msa0183960:CDS 40.0%
TGCAAACAAGTGGAAGAAGA+AGG + chr1_4:73062550-73062569 Msa0183960:CDS 40.0%
AAACAAGTGGAAGAAGAAGG+CGG + chr1_4:73062553-73062572 Msa0183960:CDS 40.0%
TCGGAATCTTGATGAGTTCA+TGG + chr1_4:73062607-73062626 Msa0183960:CDS 40.0%
GCTAAACCTATTCTTGCCTA+AGG - chr1_4:73063114-73063133 None:intergenic 40.0%
! GAGTGCCTAGAGATATTTTG+TGG + chr1_4:73063911-73063930 Msa0183960:intron 40.0%
! AGGGAGCTTCCACAAATTTT+AGG + chr1_4:73063993-73064012 Msa0183960:intron 40.0%
! GGGAGCTTCCACAAATTTTA+GGG + chr1_4:73063994-73064013 Msa0183960:intron 40.0%
! GGAGCTTCCACAAATTTTAG+GGG + chr1_4:73063995-73064014 Msa0183960:intron 40.0%
!! CTTCCACAAATTTTAGGGGA+TGG + chr1_4:73063999-73064018 Msa0183960:intron 40.0%
!! TCCACAAATTTTAGGGGATG+GGG + chr1_4:73064001-73064020 Msa0183960:intron 40.0%
GAAAATGACGTAGTCCTTCT+CGG + chr1_4:73064153-73064172 Msa0183960:intron 40.0%
TTCATTCTTAGCCTAGGCAA+AGG + chr1_4:73065022-73065041 Msa0183960:intron 40.0%
TAACAAGATGACCTTTGCCT+AGG - chr1_4:73065036-73065055 None:intergenic 40.0%
GTAACAGTTCATTACTTGGG+CGG - chr1_4:73065193-73065212 None:intergenic 40.0%
GCAGAAGAAGAATTAGTAGC+GGG - chr1_4:73065298-73065317 None:intergenic 40.0%
AATTTGTGGCGTCAACCTAT+CGG - chr1_4:73065385-73065404 None:intergenic 40.0%
!! GTTTTTGGGGATGGAATTTG+TGG - chr1_4:73065399-73065418 None:intergenic 40.0%
TCTCATAGGTCCATTTCCAT+AGG + chr1_4:73065469-73065488 Msa0183960:intron 40.0%
TGGTATTGTGCCTATGGAAA+TGG - chr1_4:73065482-73065501 None:intergenic 40.0%
AGAGTCCCCTTTATATAGTG+TGG - chr1_4:73065710-73065729 None:intergenic 40.0%
GATACCTTTGACTGGAACAT+CGG - chr1_4:73065829-73065848 None:intergenic 40.0%
TTGCAAGTGATACCTTTGAC+TGG - chr1_4:73065837-73065856 None:intergenic 40.0%
GTGGAGCTATGTTATGACTA+GGG + chr1_4:73065863-73065882 Msa0183960:intron 40.0%
AGCTATGTTATGACTAGGGA+AGG + chr1_4:73065867-73065886 Msa0183960:intron 40.0%
AGCCAATTAGGTCAAGCAAT+TGG + chr1_4:73065973-73065992 Msa0183960:intron 40.0%
AGCCAATTGCTTGACCTAAT+TGG - chr1_4:73065978-73065997 None:intergenic 40.0%
!! TTAGCTTGCAAAGCACTCTT+TGG - chr1_4:73066041-73066060 None:intergenic 40.0%
!! AAGAGTGCTTTGCAAGCTAA+TGG + chr1_4:73066041-73066060 Msa0183960:intron 40.0%
! AGAGTGCTTTGCAAGCTAAT+GGG + chr1_4:73066042-73066061 Msa0183960:intron 40.0%
! ATCACTTTAGGAGGGAAATG+AGG - chr1_4:73066148-73066167 None:intergenic 40.0%
GCTTGGTAAATCACTTTAGG+AGG - chr1_4:73066157-73066176 None:intergenic 40.0%
! TGCCGTCAGCTTATTTGTTA+TGG + chr1_4:73066940-73066959 Msa0183960:CDS 40.0%
TGAAAACTATCAATGCCTGG+AGG - chr1_4:73066984-73067003 None:intergenic 40.0%
!!! TCCAGGCATTGATAGTTTTC+AGG + chr1_4:73066983-73067002 Msa0183960:CDS 40.0%
TCCTGAAAACTATCAATGCC+TGG - chr1_4:73066987-73067006 None:intergenic 40.0%
!! GATAGTTTTCAGGAAGAACC+AGG + chr1_4:73066993-73067012 Msa0183960:CDS 40.0%
AGCATTTATGAGACTCATGG+GGG + chr1_4:73067283-73067302 Msa0183960:intron 40.0%
!!! GTTAAATTTTTTGCACCCCC+TGG - chr1_4:73067572-73067591 None:intergenic 40.0%
GTTGTTTGAGAGCGAATCAT+GGG - chr1_4:73067755-73067774 None:intergenic 40.0%
GTGTTATGCTATTACGGGAT+TGG - chr1_4:73067924-73067943 None:intergenic 40.0%
TGTGAGAAAAGAGTGGATCA+CGG + chr1_4:73068092-73068111 Msa0183960:intron 40.0%
! GGGTGCAAAGAGAAATTTTC+AGG + chr1_4:73068113-73068132 Msa0183960:intron 40.0%
ATTTGCAATGTATTCAGGGG+CGG - chr1_4:73068227-73068246 None:intergenic 40.0%
GTCATGTGATATCTTCAGCA+TGG - chr1_4:73068268-73068287 None:intergenic 40.0%
TGTTCATCAGCTGGAGTATA+AGG - chr1_4:73068355-73068374 None:intergenic 40.0%
TGGAACATTTGTTCATCAGC+TGG - chr1_4:73068364-73068383 None:intergenic 40.0%
ATCTCAATACTGGAAAGGCT+TGG - chr1_4:73068547-73068566 None:intergenic 40.0%
TTATGGCTATTGGTCATGTG+AGG + chr1_4:73068728-73068747 Msa0183960:intron 40.0%
TCATGTGAGGCACAAGAATT+TGG + chr1_4:73068741-73068760 Msa0183960:intron 40.0%
!! TTTGCATTGAAGGCACTCAT+AGG + chr1_4:73068779-73068798 Msa0183960:intron 40.0%
GGAAGTTGCAAGAAACCATA+TGG - chr1_4:73068865-73068884 None:intergenic 40.0%
!! AAGCTAGAAGCACCTATTTC+AGG + chr1_4:73069151-73069170 Msa0183960:three_prime_UTR 40.0%
GAGACAAGGAGGAGCTTAAT+GGG - chr1_4:73061267-73061286 None:intergenic 45.0%
AGAGACAAGGAGGAGCTTAA+TGG - chr1_4:73061268-73061287 None:intergenic 45.0%
CTTGTGCTGGAAAAGAGACA+AGG - chr1_4:73061281-73061300 None:intergenic 45.0%
! CTTGTCTCTTTTCCAGCACA+AGG + chr1_4:73061279-73061298 Msa0183960:CDS 45.0%
TGGTTTATGTGTCCTTGTGC+TGG - chr1_4:73061294-73061313 None:intergenic 45.0%
GTAGCAACTCCAATTGGTGA+TGG + chr1_4:73061423-73061442 Msa0183960:CDS 45.0%
!! TGTACCAGATGGTGATGGTT+TGG + chr1_4:73061476-73061495 Msa0183960:intron 45.0%
!! GTAGTTCTGAAGAGCTCTGA+AGG - chr1_4:73061502-73061521 None:intergenic 45.0%
TACGCTGAAATTGAGGTTGC+TGG + chr1_4:73061519-73061538 Msa0183960:intron 45.0%
GTAAGTGGTGAAAACAGCAG+CGG - chr1_4:73061688-73061707 None:intergenic 45.0%
CGAAGGACCAACAGTTCTTA+TGG - chr1_4:73061964-73061983 None:intergenic 45.0%
TGGCTAGACACAAAGCCAAA+AGG + chr1_4:73062065-73062084 Msa0183960:intron 45.0%
! AATCCTGGTGTTTTGCCTGA+TGG + chr1_4:73062200-73062219 Msa0183960:intron 45.0%
! ATCCTGGTGTTTTGCCTGAT+GGG + chr1_4:73062201-73062220 Msa0183960:intron 45.0%
!!! TTTGCCTGATGGGTTTTTGG+AGG + chr1_4:73062211-73062230 Msa0183960:intron 45.0%
TTGGAGGACACAAATGAGAG+AGG + chr1_4:73062227-73062246 Msa0183960:intron 45.0%
TGGAGGACACAAATGAGAGA+GGG + chr1_4:73062228-73062247 Msa0183960:intron 45.0%
CACAAATGAGAGAGGGAAAG+TGG + chr1_4:73062235-73062254 Msa0183960:intron 45.0%
TGTGCAAGGACTTCTACTTG+TGG - chr1_4:73062272-73062291 None:intergenic 45.0%
ATGCAACTGAAGGATGTGCA+AGG - chr1_4:73062286-73062305 None:intergenic 45.0%
GCATGTTTCGTAACACACTG+TGG + chr1_4:73062302-73062321 Msa0183960:intron 45.0%
GTTTCGTAACACACTGTGGT+TGG + chr1_4:73062306-73062325 Msa0183960:intron 45.0%
CTGTGGTTGGAATTCATCAC+TGG + chr1_4:73062319-73062338 Msa0183960:intron 45.0%
!! GTAAGTTGGTCACCTCTTGA+TGG - chr1_4:73062380-73062399 None:intergenic 45.0%
CTCATCAAGATTCCGATCAG+AGG - chr1_4:73062603-73062622 None:intergenic 45.0%
GCATGCCTACCAAATTATGC+AGG - chr1_4:73062744-73062763 None:intergenic 45.0%
ACAGGAAAGGAAGAGTGGAA+GGG - chr1_4:73062947-73062966 None:intergenic 45.0%
TACAGGAAAGGAAGAGTGGA+AGG - chr1_4:73062948-73062967 None:intergenic 45.0%
GAAGTACAGGAAAGGAAGAG+TGG - chr1_4:73062952-73062971 None:intergenic 45.0%
GGCTAAGACCATACTTGACA+GGG - chr1_4:73063801-73063820 None:intergenic 45.0%
TGGCTAAGACCATACTTGAC+AGG - chr1_4:73063802-73063821 None:intergenic 45.0%
ACCCCATCCCCTAAAATTTG+TGG - chr1_4:73064005-73064024 None:intergenic 45.0%
! ATGAGCGTAAGGTTGATCCT+TGG - chr1_4:73064061-73064080 None:intergenic 45.0%
! GCATCTCAATGCTAGCTCTT+GGG - chr1_4:73064124-73064143 None:intergenic 45.0%
! TGCATCTCAATGCTAGCTCT+TGG - chr1_4:73064125-73064144 None:intergenic 45.0%
TGAATGCGAAGTTCGAGACT+CGG + chr1_4:73064193-73064212 Msa0183960:intron 45.0%
CTCGACGGTTACAAATTCGT+GGG - chr1_4:73065654-73065673 None:intergenic 45.0%
GCCTTTGTAAGGTACACGTA+GGG - chr1_4:73065677-73065696 None:intergenic 45.0%
AGCCTTTGTAAGGTACACGT+AGG - chr1_4:73065678-73065697 None:intergenic 45.0%
! TTTATATAGTGTGGAGGCGC+AGG - chr1_4:73065701-73065720 None:intergenic 45.0%
TGCGCCTCCACACTATATAA+AGG + chr1_4:73065700-73065719 Msa0183960:intron 45.0%
GCGCCTCCACACTATATAAA+GGG + chr1_4:73065701-73065720 Msa0183960:intron 45.0%
CGCCTCCACACTATATAAAG+GGG + chr1_4:73065702-73065721 Msa0183960:intron 45.0%
GTCCCCTTTATATAGTGTGG+AGG - chr1_4:73065707-73065726 None:intergenic 45.0%
CTTTGACTGGAACATCGGAA+GGG - chr1_4:73065824-73065843 None:intergenic 45.0%
! AAGGTATCACTTGCAACCAG+TGG + chr1_4:73065841-73065860 Msa0183960:intron 45.0%
TCATAACATAGCTCCACCAC+TGG - chr1_4:73065860-73065879 None:intergenic 45.0%
GGTGGAGCTATGTTATGACT+AGG + chr1_4:73065862-73065881 Msa0183960:intron 45.0%
GAGTGCTTTGCAAGCTAATG+GGG + chr1_4:73066043-73066062 Msa0183960:intron 45.0%
! TGGTGTGTGTTGCAAGCTTT+TGG + chr1_4:73066079-73066098 Msa0183960:intron 45.0%
CTGCATTTATTGCTGTCGTG+TGG - chr1_4:73066192-73066211 None:intergenic 45.0%
! ATAGGCGTGGTGGAAACAAA+AGG + chr1_4:73066377-73066396 Msa0183960:intron 45.0%
ATTAGAGAAATGCTGCCTCC+AGG + chr1_4:73066966-73066985 Msa0183960:CDS 45.0%
!! AGTTTTCAGGAAGAACCAGG+AGG + chr1_4:73066996-73067015 Msa0183960:CDS 45.0%
GTATCAGTAGTCCATGACCA+AGG - chr1_4:73067071-73067090 None:intergenic 45.0%
ATACATTCAGTGGCGTATCC+AGG + chr1_4:73067538-73067557 Msa0183960:intron 45.0%
GGTTGTTTGAGAGCGAATCA+TGG - chr1_4:73067756-73067775 None:intergenic 45.0%
CCAGAGAAGAAGATGTAGTG+CGG - chr1_4:73067986-73068005 None:intergenic 45.0%
GTGAGAAAAGAGTGGATCAC+GGG + chr1_4:73068093-73068112 Msa0183960:intron 45.0%
GCGGATCTACATGTAGTTGA+GGG - chr1_4:73068208-73068227 None:intergenic 45.0%
GTCACAGAGTTCGCTCATAT+TGG - chr1_4:73068322-73068341 None:intergenic 45.0%
AAGAGGGAGACTTCATTACC+AGG - chr1_4:73068593-73068612 None:intergenic 45.0%
CAGTGACAGTTTCTTTGGAC+AGG - chr1_4:73068897-73068916 None:intergenic 45.0%
!! TAATGCCAGAAGTGCTGACA+TGG + chr1_4:73069027-73069046 Msa0183960:CDS 45.0%
CATCCAGATTCCAAGTCCAA+CGG + chr1_4:73069092-73069111 Msa0183960:three_prime_UTR 45.0%
ATTCCAAGTCCAACGGAAGA+AGG + chr1_4:73069099-73069118 Msa0183960:three_prime_UTR 45.0%
ATTCCTTCTTCCGTTGGACT+TGG - chr1_4:73069105-73069124 None:intergenic 45.0%
CCTTTGATTCCTTCTTCCGT+TGG - chr1_4:73069111-73069130 None:intergenic 45.0%
CCAACGGAAGAAGGAATCAA+AGG + chr1_4:73069108-73069127 Msa0183960:three_prime_UTR 45.0%
!! GCTTCTAGCTTTGTGATCCA+TGG - chr1_4:73069142-73069161 None:intergenic 45.0%
! GAAGCACCTATTTCAGGTCA+AGG + chr1_4:73069157-73069176 Msa0183960:three_prime_UTR 45.0%
TGGGTACCTTGACCTGAAAT+AGG - chr1_4:73069166-73069185 None:intergenic 45.0%
AAAATGGCGCATTCACTGGT+GGG - chr1_4:73069185-73069204 None:intergenic 45.0%
AAAAATGGCGCATTCACTGG+TGG - chr1_4:73069186-73069205 None:intergenic 45.0%
TGCAAAAATGGCGCATTCAC+TGG - chr1_4:73069189-73069208 None:intergenic 45.0%
GCAGTTATCATAACTCGCAC+TGG - chr1_4:73069226-73069245 None:intergenic 45.0%
AGCTGGATCAGAGTTTGTGA+TGG + chr1_4:73069269-73069288 Msa0183960:three_prime_UTR 45.0%
TGCAAATGAGGCAGCCAAAT+AGG - chr1_4:73069305-73069324 None:intergenic 45.0%
!! CATGCACTGGTTTGCAAATG+AGG - chr1_4:73069317-73069336 None:intergenic 45.0%
!!! AAAGAAATTATATAAATTTT+AGG + chr1_4:73063275-73063294 Msa0183960:intron 5.0%
!!! AAGAAATTATATAAATTTTA+GGG + chr1_4:73063276-73063295 Msa0183960:intron 5.0%
!!! AATTAATTATAAATTTTTGT+TGG - chr1_4:73063464-73063483 None:intergenic 5.0%
!! AGAAAAATTAAAATATTTAT+AGG + chr1_4:73063640-73063659 Msa0183960:intron 5.0%
!! GAAAAATTAAAATATTTATA+GGG + chr1_4:73063641-73063660 Msa0183960:intron 5.0%
!! AAAAATTAAAATATTTATAG+GGG + chr1_4:73063642-73063661 Msa0183960:intron 5.0%
!!! TGAAAATATTTTTATTATTT+CGG - chr1_4:73067778-73067797 None:intergenic 5.0%
GTGCTGGAAAAGAGACAAGG+AGG - chr1_4:73061278-73061297 None:intergenic 50.0%
GATGGTGTACCAGATGGTGA+TGG + chr1_4:73061471-73061490 Msa0183960:CDS 50.0%
AAGGCCAAACCATCACCATC+TGG - chr1_4:73061483-73061502 None:intergenic 50.0%
AACCCATCAGGCAAAACACC+AGG - chr1_4:73062206-73062225 None:intergenic 50.0%
GTGTCCTCCAAAAACCCATC+AGG - chr1_4:73062218-73062237 None:intergenic 50.0%
AGAGAGGGAAAGTGGTGAAG+TGG + chr1_4:73062243-73062262 Msa0183960:intron 50.0%
CAACTGGGGAAAAAGCAGAG+AGG + chr1_4:73062516-73062535 Msa0183960:CDS 50.0%
TGTCCTTTCTCCTCCCTACA+CGG + chr1_4:73062701-73062720 Msa0183960:intron 50.0%
TATCCGTGTAGGGAGGAGAA+AGG - chr1_4:73062707-73062726 None:intergenic 50.0%
TTCTCCTCCCTACACGGATA+AGG + chr1_4:73062707-73062726 Msa0183960:intron 50.0%
TCTCCTCCCTACACGGATAA+GGG + chr1_4:73062708-73062727 Msa0183960:intron 50.0%
TTACCCTTATCCGTGTAGGG+AGG - chr1_4:73062714-73062733 None:intergenic 50.0%
GACCAATGTACCTTGCAGCT+CGG + chr1_4:73064778-73064797 Msa0183960:intron 50.0%
GGGTGTGTTGCGAGTAAGAT+GGG - chr1_4:73065528-73065547 None:intergenic 50.0%
GCTCGACGGTTACAAATTCG+TGG - chr1_4:73065655-73065674 None:intergenic 50.0%
GCCCTACGTGTACCTTACAA+AGG + chr1_4:73065673-73065692 Msa0183960:intron 50.0%
CCTTTGACTGGAACATCGGA+AGG - chr1_4:73065825-73065844 None:intergenic 50.0%
CCTTCCGATGTTCCAGTCAA+AGG + chr1_4:73065822-73065841 Msa0183960:intron 50.0%
GTATCACTTGCAACCAGTGG+TGG + chr1_4:73065844-73065863 Msa0183960:intron 50.0%
GTTATGACTAGGGAAGGCCA+CGG + chr1_4:73065873-73065892 Msa0183960:intron 50.0%
! TGTGGCTTGTGTGGTAAGCT+TGG - chr1_4:73066174-73066193 None:intergenic 50.0%
! CATCTGGCTCAAACCATCCT+TGG + chr1_4:73067051-73067070 Msa0183960:CDS 50.0%
GCTCAAACCATCCTTGGTCA+TGG + chr1_4:73067057-73067076 Msa0183960:CDS 50.0%
CAGTAGTCCATGACCAAGGA+TGG - chr1_4:73067067-73067086 None:intergenic 50.0%
CCGCACTACATCTTCTTCTC+TGG + chr1_4:73067983-73068002 Msa0183960:intron 50.0%
! AAGTGAAGAAGAGGTGCAGC+AGG - chr1_4:73068062-73068081 None:intergenic 50.0%
GTTGAAAGTTCAGGGTGTGC+AGG + chr1_4:73068176-73068195 Msa0183960:intron 50.0%
GGCGGATCTACATGTAGTTG+AGG - chr1_4:73068209-73068228 None:intergenic 50.0%
TGTTTCAGGATCGAAGACGC+AGG + chr1_4:73068999-73069018 Msa0183960:intron 50.0%
TGCTGACATGGAGACGCAAA+AGG + chr1_4:73069039-73069058 Msa0183960:CDS 50.0%
CTTCCGTTGGACTTGGAATC+TGG - chr1_4:73069098-73069117 None:intergenic 50.0%
TTCAGCACAACAGAGACGGC+TGG + chr1_4:73061363-73061382 Msa0183960:CDS 55.0%
CAAGTGGAAGAAGAAGGCGG+AGG + chr1_4:73062556-73062575 Msa0183960:CDS 55.0%
GAAGAAGGCGGAGGAAGCTT+TGG + chr1_4:73062565-73062584 Msa0183960:CDS 55.0%
CCGATCAGAGGATCCACCAA+CGG - chr1_4:73062591-73062610 None:intergenic 55.0%
! CCGTTGGTGGATCCTCTGAT+CGG + chr1_4:73062588-73062607 Msa0183960:CDS 55.0%
! GTGGTTGGCCCTGTCAAGTA+TGG + chr1_4:73063790-73063809 Msa0183960:intron 55.0%
!! CCTTCATCGACTCTCCGAGA+AGG - chr1_4:73064170-73064189 None:intergenic 55.0%
CCTTCTCGGAGAGTCGATGA+AGG + chr1_4:73064167-73064186 Msa0183960:intron 55.0%
ATGCGAAGTTCGAGACTCGG+AGG + chr1_4:73064196-73064215 Msa0183960:intron 55.0%
GTCCGAGCTGCAAGGTACAT+TGG - chr1_4:73064783-73064802 None:intergenic 55.0%
AACAAACGGTCCGAGCTGCA+AGG - chr1_4:73064791-73064810 None:intergenic 55.0%
GGGGTGTGTTGCGAGTAAGA+TGG - chr1_4:73065529-73065548 None:intergenic 55.0%
!! AGGGAGGTGCTCAGAGCAAA+CGG + chr1_4:73065558-73065577 Msa0183960:intron 55.0%
AGATTCGCAGGAGTCATGGG+GGG - chr1_4:73065613-73065632 None:intergenic 55.0%
GAGATTCGCAGGAGTCATGG+GGG - chr1_4:73065614-73065633 None:intergenic 55.0%
CGAGATTCGCAGGAGTCATG+GGG - chr1_4:73065615-73065634 None:intergenic 55.0%
GCGAGATTCGCAGGAGTCAT+GGG - chr1_4:73065616-73065635 None:intergenic 55.0%
AGCGAGATTCGCAGGAGTCA+TGG - chr1_4:73065617-73065636 None:intergenic 55.0%
AAGGTACACGTAGGGCTCGA+CGG - chr1_4:73065669-73065688 None:intergenic 55.0%
!! TACAAATGTTGGGGGTGCCG+TGG - chr1_4:73065893-73065912 None:intergenic 55.0%
! TTGCTGTCGTGTGGCTTGTG+TGG - chr1_4:73066183-73066202 None:intergenic 55.0%
TTTCATCAGCCACGTCGACG+AGG + chr1_4:73067028-73067047 Msa0183960:CDS 55.0%
GAGACTCATGGGGGAGCTTA+TGG + chr1_4:73067292-73067311 Msa0183960:intron 55.0%
CGTCTCCATGTCAGCACTTC+TGG - chr1_4:73069035-73069054 None:intergenic 55.0%
CAGTGGCACCCTTTGCAGCA+AGG - chr1_4:73061338-73061357 None:intergenic 60.0%
! GAGGAAGCTTTGGCCGTTGG+TGG + chr1_4:73062575-73062594 Msa0183960:CDS 60.0%
CTCCTGCGAATCTCGCTCGA+CGG + chr1_4:73065620-73065639 Msa0183960:intron 60.0%
AACCGTCGAGCGAGATTCGC+AGG - chr1_4:73065625-73065644 None:intergenic 60.0%
GCGAATCTCGCTCGACGGTT+AGG + chr1_4:73065625-73065644 Msa0183960:intron 60.0%
GAGGCGCAGGAGCCTTTGTA+AGG - chr1_4:73065688-73065707 None:intergenic 60.0%
!! GACGGATTTGCTGCGCATGC+AGG + chr1_4:73066523-73066542 Msa0183960:intron 60.0%
AGTGGCGTATCCAGGACCCT+GGG + chr1_4:73067546-73067565 Msa0183960:intron 60.0%
! TTTTTGCACCCCCTGGCCCA+GGG - chr1_4:73067565-73067584 None:intergenic 60.0%
!!! TTTTTTGCACCCCCTGGCCC+AGG - chr1_4:73067566-73067585 None:intergenic 60.0%
! GCGGAGGAAGCTTTGGCCGT+TGG + chr1_4:73062572-73062591 Msa0183960:CDS 65.0%
AACACACCCCTTCCCCGCGA+GGG + chr1_4:73065539-73065558 Msa0183960:intron 65.0%
! TGCTCTGAGCACCTCCCTCG+CGG - chr1_4:73065556-73065575 None:intergenic 65.0%
! AGCCACGTCGACGAGGCATC+TGG + chr1_4:73067035-73067054 Msa0183960:CDS 65.0%
AGCCAGATGCCTCGTCGACG+TGG - chr1_4:73067040-73067059 None:intergenic 65.0%
CAGTGGCGTATCCAGGACCC+TGG + chr1_4:73067545-73067564 Msa0183960:intron 65.0%
GTATCCAGGACCCTGGGCCA+GGG + chr1_4:73067552-73067571 Msa0183960:intron 65.0%
TATCCAGGACCCTGGGCCAG+GGG + chr1_4:73067553-73067572 Msa0183960:intron 65.0%
CAACACACCCCTTCCCCGCG+AGG + chr1_4:73065538-73065557 Msa0183960:intron 70.0%
AGCACCTCCCTCGCGGGGAA+GGG - chr1_4:73065549-73065568 None:intergenic 70.0%
CTCTGAGCACCTCCCTCGCG+GGG - chr1_4:73065554-73065573 None:intergenic 70.0%
! GCTCTGAGCACCTCCCTCGC+GGG - chr1_4:73065555-73065574 None:intergenic 70.0%
CGTATCCAGGACCCTGGGCC+AGG + chr1_4:73067551-73067570 Msa0183960:intron 70.0%
ATCCAGGACCCTGGGCCAGG+GGG + chr1_4:73067554-73067573 Msa0183960:intron 70.0%
ACACCCCTTCCCCGCGAGGG+AGG + chr1_4:73065542-73065561 Msa0183960:intron 75.0%
GCACCTCCCTCGCGGGGAAG+GGG - chr1_4:73065548-73065567 None:intergenic 75.0%
GAGCACCTCCCTCGCGGGGA+AGG - chr1_4:73065550-73065569 None:intergenic 75.0%
! CACCCCCTGGCCCAGGGTCC+TGG - chr1_4:73067559-73067578 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 73061249 73069343 73061249 ID=Msa0183960;Name=Msa0183960
chr1_4 mRNA 73061249 73069343 73061249 ID=Msa0183960-mRNA-1;Parent=Msa0183960;Name=Msa0183960-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0.2|0.6|1|1|5|253|246
chr1_4 exon 73061249 73061492 73061249 ID=Msa0183960-mRNA-1:exon:24767;Parent=Msa0183960-mRNA-1
chr1_4 exon 73062435 73062664 73062435 ID=Msa0183960-mRNA-1:exon:24768;Parent=Msa0183960-mRNA-1
chr1_4 exon 73063396 73063402 73063396 ID=Msa0183960-mRNA-1:exon:24769;Parent=Msa0183960-mRNA-1
chr1_4 exon 73066931 73067106 73066931 ID=Msa0183960-mRNA-1:exon:24770;Parent=Msa0183960-mRNA-1
chr1_4 exon 73069007 73069343 73069007 ID=Msa0183960-mRNA-1:exon:24771;Parent=Msa0183960-mRNA-1
chr1_4 CDS 73061249 73061492 73061249 ID=Msa0183960-mRNA-1:cds;Parent=Msa0183960-mRNA-1
chr1_4 CDS 73062435 73062664 73062435 ID=Msa0183960-mRNA-1:cds;Parent=Msa0183960-mRNA-1
chr1_4 CDS 73063396 73063402 73063396 ID=Msa0183960-mRNA-1:cds;Parent=Msa0183960-mRNA-1
chr1_4 CDS 73066931 73067106 73066931 ID=Msa0183960-mRNA-1:cds;Parent=Msa0183960-mRNA-1
chr1_4 CDS 73069007 73069090 73069007 ID=Msa0183960-mRNA-1:cds;Parent=Msa0183960-mRNA-1
chr1_4 three_prime_UTR 73069091 73069343 73069091 ID=Msa0183960-mRNA-1:three_prime_utr;Parent=Msa0183960-mRNA-1
Gene Sequence

>Msa0183960

ATGACATACGAAGATCCCATTAAGCTCCTCCTTGTCTCTTTTCCAGCACAAGGACACATAAACCATCTTGTTGGTCTAGGAAAATACCTTGCTGCAAAGGGTGCCACTGTTATCTTCAGCACAACAGAGACGGCTGGCAAAAACATGCGAGCTGCTAACAACATCATTGACAAAGTAGCAACTCCAATTGGTGATGGTACTTTTGCTTTCGAGTTCTTTGATGATGGTGTACCAGATGGTGATGGAATTAAAATAGGTAGTGGTTGGATTGTAAATGATAAATTGGTAACAAGAGATGAGGTGAAGAAGTGCTTATTGGAAGCAACAACTGGGGAAAAAGCAGAGAGGTTGAAGCAAAATGCAAACAAGTGGAAGAAGAAGGCGGAGGAAGCTTTGGCCGTTGGTGGATCCTCTGATCGGAATCTTGATGAGTTCATGGAAGACATTAAGAAACATGCATCATTAATTAATAATTTGGAAGGTTCTTCTCTGCCGTCAGCTTATTTGTTATGGATAATTAGAGAAATGCTGCCTCCAGGCATTGATAGTTTTCAGGAAGAACCAGGAGGAACATATACTTTCATCAGCCACGTCGACGAGGCATCTGGCTCAAACCATCCTTGGTCATGGACTACTGATACAAGTTCAAAGAATCAGGATCGAAGACGCAGGAAGAGTAATGCCAGAAGTGCTGACATGGAGACGCAAAAGGAGATTTCTGATACTGTTAAGAGTGAGTGA

Protein sequence

>Msa0183960

MTYEDPIKLLLVSFPAQGHINHLVGLGKYLAAKGATVIFSTTETAGKNMRAANNIIDKVATPIGDGTFAFEFFDDGVPDGDGIKIGSGWIVNDKLVTRDEVKKCLLEATTGEKAERLKQNANKWKKKAEEALAVGGSSDRNLDEFMEDIKKHASLINNLEGSSLPSAYLLWIIREMLPPGIDSFQEEPGGTYTFISHVDEASGSNHPWSWTTDTSSKNQDRRRRKSNARSADMETQKEISDTVKSE*