AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1039150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039150 MtrunA17_Chr7g0272881 97.619 252 5 1 1 252 1 251 0.0 512
Msa1039150 MtrunA17_Chr2g0319981 31.019 216 126 10 8 207 19 227 5.90e-18 81.6
Msa1039150 MtrunA17_Chr4g0041461 31.361 169 90 7 52 207 74 229 1.78e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039150 AT3G05345.1 62.353 255 82 7 1 252 1 244 1.90e-109 315
Msa1039150 AT2G42750.1 31.081 222 124 9 2 207 25 233 9.88e-17 79.0

Find 104 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATCACAGAGAATTATTT+TGG 0.134244 7_1:+76274832 Msa1039150:CDS
AACATGCTGGGTTGAAAATT+TGG 0.174458 7_1:-76275267 None:intergenic
CCTTCAATTTAAACATTCTT+TGG 0.229699 7_1:+76277958 Msa1039150:three_prime_UTR
TTAAACATTCTTTGGATTCC+TGG 0.261201 7_1:+76277966 Msa1039150:three_prime_UTR
TCGAAAAGCGGCTTTAATTT+CGG 0.279196 7_1:-76273705 None:intergenic
CTCAGTGCTATCTATAGTTT+GGG 0.286961 7_1:-76275321 None:intergenic
TTTGGTGTTTGGTTTCTCTA+TGG 0.303094 7_1:+76277817 Msa1039150:three_prime_UTR
TTCACATTTGTCTCTTCAAC+TGG 0.307988 7_1:+76274542 Msa1039150:CDS
TCTCAGTGCTATCTATAGTT+TGG 0.308680 7_1:-76275322 None:intergenic
CAACCTGAACGATCCCATTA+TGG 0.329530 7_1:-76273510 None:intergenic
GCACTCTGTCATCCAGAAAA+TGG 0.332795 7_1:+76273432 Msa1039150:five_prime_UTR
AAAAGTCGTGTAGTGAGATT+TGG 0.339320 7_1:-76275595 None:intergenic
CCAAAGAATGTTTAAATTGA+AGG 0.339907 7_1:-76277958 None:intergenic
CACAGTTGGTCTTACCATAA+TGG 0.340880 7_1:+76273496 Msa1039150:exon
ACTTTGACATAATCTTCCTT+AGG 0.356859 7_1:-76275775 None:intergenic
CTACGGATGAATTTGGTGTT+TGG 0.358765 7_1:+76277806 Msa1039150:intron
GTTATTCTCAAACTTAGCTT+TGG 0.385126 7_1:-76275219 None:intergenic
TGTGGTTGACTTTGGGATCA+AGG 0.398210 7_1:+76275813 Msa1039150:three_prime_UTR
TGCCTCAGCTGATGTATCAT+AGG 0.402393 7_1:-76275174 None:intergenic
CTGTATTTGATAACACTTGC+AGG 0.403269 7_1:+76275706 Msa1039150:three_prime_UTR
GGTTCACTTCACCCCTCCTA+TGG 0.409915 7_1:+76273453 Msa1039150:five_prime_UTR
ATGGTTCTGTGGTTGACTTT+GGG 0.411324 7_1:+76275806 Msa1039150:three_prime_UTR
GAACACTTGATAGTTATTAC+AGG 0.423882 7_1:-76277936 None:intergenic
CATCTCTGTTGAGGTCTGGA+TGG 0.429052 7_1:-76273833 None:intergenic
TTACCATAATGGGATCGTTC+AGG 0.432032 7_1:+76273507 Msa1039150:exon
ATTTCGGCGGCTGAGCAGTT+AGG 0.433399 7_1:-76273689 None:intergenic
CCAAAATAATTCTCTGTGAT+GGG 0.435014 7_1:-76274832 None:intergenic
GATGGTTCTGTGGTTGACTT+TGG 0.437474 7_1:+76275805 Msa1039150:three_prime_UTR
ACATAATGAATGCAACTTCT+CGG 0.437627 7_1:-76274806 None:intergenic
ACAGTTGGTCTTACCATAAT+GGG 0.440049 7_1:+76273497 Msa1039150:exon
TCCAAAATAATTCTCTGTGA+TGG 0.443344 7_1:-76274833 None:intergenic
CTTTGACATAATCTTCCTTA+GGG 0.470387 7_1:-76275774 None:intergenic
GTCACTCCAGGCAGCAGTAT+TGG 0.470692 7_1:-76275752 None:intergenic
GTTAATGAGTTTCTTTGTGT+CGG 0.474240 7_1:+76274222 Msa1039150:CDS
GTCCAACAGCACACTGAACT+TGG 0.476520 7_1:-76274778 None:intergenic
AATTTGTGATGGTGTGTAGT+TGG 0.477410 7_1:-76274038 None:intergenic
AACAACTGTTTATAGGTCAT+GGG 0.479720 7_1:+76274747 Msa1039150:intron
CATAATGAATGCAACTTCTC+GGG 0.481674 7_1:-76274805 None:intergenic
ACGTAATACAACCACAATGA+TGG 0.482587 7_1:-76277855 None:intergenic
TCCTCTGCTTACACCGTCCT+CGG 0.486253 7_1:+76273659 Msa1039150:CDS
AGATACTCACTACTTTATAG+TGG 0.491771 7_1:-76277890 None:intergenic
TTTCAACCCAGCATGTTGAC+TGG 0.504611 7_1:+76275273 Msa1039150:CDS
TACCAAGTTCAGTGTGCTGT+TGG 0.507441 7_1:+76274776 Msa1039150:CDS
TTCACACTCTGGTCTGTCAA+AGG 0.509595 7_1:-76274184 None:intergenic
TCGACTTACTTTCCCATAGG+AGG 0.511597 7_1:-76273466 None:intergenic
GACGGTGTAAGCAGAGGAAG+TGG 0.512906 7_1:-76273654 None:intergenic
TCACACTCTGGTCTGTCAAA+GGG 0.522302 7_1:-76274183 None:intergenic
TACGTTTCAATAATTTGTGA+TGG 0.522555 7_1:-76274049 None:intergenic
ACCATGCCAATACTGCTGCC+TGG 0.522960 7_1:+76275746 Msa1039150:three_prime_UTR
CGACTTACTTTCCCATAGGA+GGG 0.524856 7_1:-76273465 None:intergenic
CCGTGTAATTCAAGCATACC+AGG 0.525324 7_1:+76273887 Msa1039150:CDS
TTTCAGAATACTGAGGTGTA+AGG 0.526250 7_1:-76275405 None:intergenic
CAGCTACTCCCTCTGACTAA+AGG 0.527249 7_1:-76275686 None:intergenic
TGCTGCCTGGAGTGACCCTA+AGG 0.528250 7_1:+76275759 Msa1039150:three_prime_UTR
AGATCAAAAGCTTCACACTC+TGG 0.531042 7_1:-76274195 None:intergenic
CGGCGGCTGAGCAGTTAGGT+TGG 0.531621 7_1:-76273685 None:intergenic
AATTGCAGAGGCAGAGAAGA+TGG 0.533070 7_1:+76273623 Msa1039150:CDS
ATCTTCCTTAGGGTCACTCC+AGG 0.536871 7_1:-76275764 None:intergenic
GCTAAAACCAGTCAACATGC+TGG 0.539656 7_1:-76275280 None:intergenic
GCCTCAGCTGATGTATCATA+GGG 0.543724 7_1:-76275173 None:intergenic
ATGGGAAAGTAAGTCGAAGT+TGG 0.547488 7_1:+76273472 Msa1039150:five_prime_UTR
TGACTCTTATTCCATCATTG+TGG 0.547489 7_1:+76277844 Msa1039150:three_prime_UTR
CGTTTAAATCCTTTAGTCAG+AGG 0.553357 7_1:+76275677 Msa1039150:three_prime_UTR
ACTTCGACTTACTTTCCCAT+AGG 0.554474 7_1:-76273469 None:intergenic
GACTTACTTTCCCATAGGAG+GGG 0.555773 7_1:-76273464 None:intergenic
AAGGATTTAAACGCCATGGC+AGG 0.561465 7_1:-76275667 None:intergenic
TAGTTTGGGGAGTGAAGACA+TGG 0.562442 7_1:-76275307 None:intergenic
GTTCACTTCACCCCTCCTAT+GGG 0.564229 7_1:+76273454 Msa1039150:five_prime_UTR
GTTTAAATCCTTTAGTCAGA+GGG 0.564950 7_1:+76275678 Msa1039150:three_prime_UTR
TATGTCAAAGTCAATTGTGA+TGG 0.565976 7_1:+76275787 Msa1039150:three_prime_UTR
GAGTTTCTTTGTGTCGGCAA+AGG 0.566077 7_1:+76274228 Msa1039150:CDS
TAAGAGTACACATTTAGAAG+TGG 0.576670 7_1:+76278054 Msa1039150:three_prime_UTR
CTAAAACCAGTCAACATGCT+GGG 0.591004 7_1:-76275279 None:intergenic
AGAAGAGAGCACAACACAAG+TGG 0.593219 7_1:+76273410 None:intergenic
CAAAATAATTCTCTGTGATG+GGG 0.597740 7_1:-76274831 None:intergenic
TCCAGGCAGCAGTATTGGCA+TGG 0.610945 7_1:-76275747 None:intergenic
TTCTTTAAAGACACAGACAA+AGG 0.611750 7_1:-76273587 None:intergenic
ACTAAAGGATTTAAACGCCA+TGG 0.620443 7_1:-76275671 None:intergenic
ACAGCACGTGCATCTTCTCA+AGG 0.621543 7_1:+76274566 Msa1039150:CDS
TGATACTTTGGATCGAAAAG+CGG 0.622876 7_1:-76273717 None:intergenic
GTTAGGTTGGACTCCGAGGA+CGG 0.622942 7_1:-76273672 None:intergenic
AGTCAATTGTGATGGTTCTG+TGG 0.623540 7_1:+76275795 Msa1039150:three_prime_UTR
TCCGAGGACGGTGTAAGCAG+AGG 0.625114 7_1:-76273660 None:intergenic
CCTGGTATGCTTGAATTACA+CGG 0.626987 7_1:-76273887 None:intergenic
ACAACTGTTTATAGGTCATG+GGG 0.627093 7_1:+76274748 Msa1039150:intron
AAGTCGAAGTTGGACACAGT+TGG 0.629994 7_1:+76273482 Msa1039150:five_prime_UTR
AGCAGTTAGGTTGGACTCCG+AGG 0.631176 7_1:-76273676 None:intergenic
AAAACAAGAACGAATTGCAG+AGG 0.651160 7_1:+76273611 Msa1039150:CDS
GAAATAGAAAGAAATAGCAG+AGG 0.658878 7_1:-76278122 None:intergenic
CTATATAAATCAATTCACAC+TGG 0.663853 7_1:-76278031 None:intergenic
ATGAGGTGCTCTTTCCACAC+AGG 0.664251 7_1:-76274516 None:intergenic
ACCCTATGATACATCAGCTG+AGG 0.667271 7_1:+76275172 Msa1039150:CDS
TAAGCAGAGGAAGTGGACAG+AGG 0.671934 7_1:-76273647 None:intergenic
TTACATGTTTCAGAATACTG+AGG 0.676400 7_1:-76275412 None:intergenic
AAAATCTGAACATAGAGCAG+AGG 0.684780 7_1:-76278092 None:intergenic
GATTGCTGATGAGACAGTCA+TGG 0.694367 7_1:+76275343 Msa1039150:three_prime_UTR
AAAAGCGGCTTTAATTTCGG+CGG 0.695406 7_1:-76273702 None:intergenic
GAGACAAATGTGAAAGCATG+AGG 0.702751 7_1:-76274533 None:intergenic
TCAGTGCTATCTATAGTTTG+GGG 0.710241 7_1:-76275320 None:intergenic
TGGGATCAAGGCATATACTG+TGG 0.712148 7_1:+76275825 Msa1039150:three_prime_UTR
ACACAGACAAAGGAAAAGTG+CGG 0.720075 7_1:-76273577 None:intergenic
TATTTGATAACACTTGCAGG+TGG 0.753464 7_1:+76275709 Msa1039150:three_prime_UTR
AGCTTGTTCAAATTCCTGTG+TGG 0.759817 7_1:+76274502 Msa1039150:intron
AGTTTGGGGAGTGAAGACAT+GGG 0.801612 7_1:-76275306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAAAAAAATAAAAATTGT+AGG - chr7_1:76274897-76274916 None:intergenic 10.0%
!!! ACAATTTTTATTTTTTTACT+TGG + chr7_1:76274897-76274916 Msa1039150:intron 10.0%
!! TTAAAAGCTAAAATAAAAAT+TGG - chr7_1:76276111-76276130 None:intergenic 10.0%
!! GAAAAAAAATAAAAACAAAA+TGG - chr7_1:76276438-76276457 None:intergenic 10.0%
!!! ATTTTTTGATATATATAAAG+CGG - chr7_1:76277058-76277077 None:intergenic 10.0%
!! AAATACAAAAAAATTAGATT+AGG + chr7_1:76277074-76277093 Msa1039150:intron 10.0%
!! AATACAAAAAAATTAGATTA+GGG + chr7_1:76277075-76277094 Msa1039150:intron 10.0%
!! ATAAATGAAAATTAAACTAA+CGG - chr7_1:76277157-76277176 None:intergenic 10.0%
!!! TTTTTTATTAGTTTTGAAAA+AGG - chr7_1:76277385-76277404 None:intergenic 10.0%
!!! TTTTAATTTTTTTAAGGAAA+GGG - chr7_1:76277714-76277733 None:intergenic 10.0%
!!! ATTTTAATTTTTTTAAGGAA+AGG - chr7_1:76277715-76277734 None:intergenic 10.0%
!!! TGAACATTTTAATTTTTTTA+AGG - chr7_1:76277720-76277739 None:intergenic 10.0%
!!! TTCTCTTTAATTTATTACTT+AGG + chr7_1:76273800-76273819 Msa1039150:intron 15.0%
!!! ATTTTTATTTTTTTACTTGG+TGG + chr7_1:76274900-76274919 Msa1039150:intron 15.0%
!!! TTTTTATTTTTTTACTTGGT+GGG + chr7_1:76274901-76274920 Msa1039150:intron 15.0%
!! AAAGATAATATATTGACAAA+GGG - chr7_1:76274952-76274971 None:intergenic 15.0%
!! ATCTTTCTTATAAAACTAAA+AGG + chr7_1:76274966-76274985 Msa1039150:intron 15.0%
!! ATGATAGAAATAGATAAATA+GGG - chr7_1:76275016-76275035 None:intergenic 15.0%
!! TATGATAGAAATAGATAAAT+AGG - chr7_1:76275017-76275036 None:intergenic 15.0%
!!! TATAACATATTATTACCTTT+TGG + chr7_1:76275063-76275082 Msa1039150:intron 15.0%
!! ATAAAAACAAAATGGTAAAA+TGG - chr7_1:76276430-76276449 None:intergenic 15.0%
!!! CTATATTTTTTGACAATTTT+TGG - chr7_1:76276494-76276513 None:intergenic 15.0%
!!! ATTTGAATGATTTTTCAAAT+GGG - chr7_1:76276586-76276605 None:intergenic 15.0%
!! TTTCTCATTTATATTTACAT+TGG - chr7_1:76276996-76277015 None:intergenic 15.0%
!! TCAATAAAATGTAGATAATT+AGG + chr7_1:76277496-76277515 Msa1039150:intron 15.0%
!!! TGTTTTGCTTTTTTTTTAAA+TGG - chr7_1:76277548-76277567 None:intergenic 15.0%
!! AAAAGTTAAATAAAATCAAG+AGG + chr7_1:76277581-76277600 Msa1039150:intron 15.0%
!!! TTTAATTTTTTTAAGGAAAG+GGG - chr7_1:76277713-76277732 None:intergenic 15.0%
!! TTAAACTCATCAATGTAAAA+TGG - chr7_1:76274473-76274492 None:intergenic 20.0%
!! TAATGAATTTCTCAAAATGA+AGG - chr7_1:76274619-76274638 None:intergenic 20.0%
!! GAAAGATAATATATTGACAA+AGG - chr7_1:76274953-76274972 None:intergenic 20.0%
!! AAAGGAAATAAGAAATCAAA+TGG - chr7_1:76275125-76275144 None:intergenic 20.0%
!!! CTTATTTTAAGATTTTGCAA+CGG + chr7_1:76275479-76275498 Msa1039150:intron 20.0%
!! TAAATTAAAAAAGTGAGAAG+AGG - chr7_1:76276324-76276343 None:intergenic 20.0%
!! TTTCGTTTAATTACTTCTTT+AGG + chr7_1:76276454-76276473 Msa1039150:intron 20.0%
!! CTTGAGAAAGAAAAAAAAAT+TGG - chr7_1:76276526-76276545 None:intergenic 20.0%
!!! GATTTGAATGATTTTTCAAA+TGG - chr7_1:76276587-76276606 None:intergenic 20.0%
!! ATGCAAGAAAATAAAAGAAA+GGG - chr7_1:76276886-76276905 None:intergenic 20.0%
!! AATGCAAGAAAATAAAAGAA+AGG - chr7_1:76276887-76276906 None:intergenic 20.0%
!!! TTTGAATGTTTTTGTTGTTT+TGG - chr7_1:76277184-76277203 None:intergenic 20.0%
!!! GAATTTTGAAATGATAAAAG+AGG - chr7_1:76277526-76277545 None:intergenic 20.0%
!!! TTTTTATTTTAGAAATGACC+AGG - chr7_1:76277987-76278006 None:intergenic 20.0%
! AATGATTGATGTTGATACTT+TGG - chr7_1:76273732-76273751 None:intergenic 25.0%
! TGAATTGAAGAGAATGAAAA+TGG - chr7_1:76273768-76273787 None:intergenic 25.0%
!! TACGTTTCAATAATTTGTGA+TGG - chr7_1:76274052-76274071 None:intergenic 25.0%
! CCGTAAATTTCAAAACAATA+CGG - chr7_1:76274098-76274117 None:intergenic 25.0%
!!! CCGTATTGTTTTGAAATTTA+CGG + chr7_1:76274095-76274114 Msa1039150:intron 25.0%
! ACAATTTAGACCACATATAT+CGG + chr7_1:76274317-76274336 Msa1039150:intron 25.0%
! AATTTCTCAAAATGAAGGAA+GGG - chr7_1:76274614-76274633 None:intergenic 25.0%
! TATCTTCAACAACTGTTTAT+AGG + chr7_1:76274740-76274759 Msa1039150:intron 25.0%
! ATAAATAGGGAAATTAAGCA+TGG - chr7_1:76275003-76275022 None:intergenic 25.0%
! AAACATTGTATGATTCCAAA+AGG - chr7_1:76275081-76275100 None:intergenic 25.0%
! ATACTGAAACATCAACAAAA+AGG - chr7_1:76275143-76275162 None:intergenic 25.0%
!!! GAAAATTTGGTTTTCTTCTT+TGG - chr7_1:76275257-76275276 None:intergenic 25.0%
! GCAGCTCATAAAAAATTTAT+TGG - chr7_1:76275376-76275395 None:intergenic 25.0%
!!! ATTTTTTATGAGCTGCTTAT+AGG + chr7_1:76275380-76275399 Msa1039150:three_prime_UTR 25.0%
!!! AATAGTCTTTGACTTTTCAA+AGG + chr7_1:76275919-76275938 Msa1039150:intron 25.0%
! ATCTTAAAATACCTCATGTT+TGG + chr7_1:76275960-76275979 Msa1039150:intron 25.0%
! AAAAATATAAAGAGCGAAGA+GGG - chr7_1:76275998-76276017 None:intergenic 25.0%
! TAAAAATATAAAGAGCGAAG+AGG - chr7_1:76275999-76276018 None:intergenic 25.0%
!!! ACACTTTGGTTTTTTTTACT+TGG - chr7_1:76276179-76276198 None:intergenic 25.0%
! TGTCAAAAAATATAGTGTCA+AGG + chr7_1:76276499-76276518 Msa1039150:intron 25.0%
!! GTTGATGAAAAATGGAAAAT+TGG - chr7_1:76276660-76276679 None:intergenic 25.0%
! TCAGCAATTAGAATGTATTT+AGG + chr7_1:76276969-76276988 Msa1039150:intron 25.0%
!! AAATTAGATTAGGGATTTTG+TGG + chr7_1:76277084-76277103 Msa1039150:intron 25.0%
! AATAGAAATTGACGTTTGAT+TGG - chr7_1:76277415-76277434 None:intergenic 25.0%
!!! CTACATTTTATTGATTTGAG+AGG - chr7_1:76277490-76277509 None:intergenic 25.0%
!! TAGAGTACTACGAATATTTA+GGG + chr7_1:76277610-76277629 Msa1039150:intron 25.0%
!! TATTGAAAAGATTTAGGGTT+CGG - chr7_1:76277667-76277686 None:intergenic 25.0%
!! AACCCTAAATCTTTTCAATA+TGG + chr7_1:76277667-76277686 Msa1039150:intron 25.0%
!! ACCCTAAATCTTTTCAATAT+GGG + chr7_1:76277668-76277687 Msa1039150:intron 25.0%
! CCAAAGAATGTTTAAATTGA+AGG - chr7_1:76277961-76277980 None:intergenic 25.0%
! CCTTCAATTTAAACATTCTT+TGG + chr7_1:76277958-76277977 Msa1039150:three_prime_UTR 25.0%
! CTATATAAATCAATTCACAC+TGG - chr7_1:76278034-76278053 None:intergenic 25.0%
! TTCTTTAAAGACACAGACAA+AGG - chr7_1:76273590-76273609 None:intergenic 30.0%
! TTTCATTTTCATCTCTGTTG+AGG - chr7_1:76273845-76273864 None:intergenic 30.0%
GTTAATGAGTTTCTTTGTGT+CGG + chr7_1:76274222-76274241 Msa1039150:CDS 30.0%
ACATAATTTCATGTCGTGTA+AGG - chr7_1:76274287-76274306 None:intergenic 30.0%
GAATTTCTCAAAATGAAGGA+AGG - chr7_1:76274615-76274634 None:intergenic 30.0%
AACAACTGTTTATAGGTCAT+GGG + chr7_1:76274747-76274766 Msa1039150:intron 30.0%
ACATAATGAATGCAACTTCT+CGG - chr7_1:76274809-76274828 None:intergenic 30.0%
CAAAATAATTCTCTGTGATG+GGG - chr7_1:76274834-76274853 None:intergenic 30.0%
CCAAAATAATTCTCTGTGAT+GGG - chr7_1:76274835-76274854 None:intergenic 30.0%
TCCAAAATAATTCTCTGTGA+TGG - chr7_1:76274836-76274855 None:intergenic 30.0%
!!! ATCACAGAGAATTATTTTGG+AGG + chr7_1:76274835-76274854 Msa1039150:CDS 30.0%
GTTATTCTCAAACTTAGCTT+TGG - chr7_1:76275222-76275241 None:intergenic 30.0%
TTACATGTTTCAGAATACTG+AGG - chr7_1:76275415-76275434 None:intergenic 30.0%
TGTAAGCTACTTACTACAAT+CGG + chr7_1:76275430-76275449 Msa1039150:intron 30.0%
!!! TTTTAAGATTTTGCAACGGA+TGG + chr7_1:76275483-76275502 Msa1039150:intron 30.0%
TTCTTTCAGTGAATGAATCA+AGG + chr7_1:76275528-76275547 Msa1039150:intron 30.0%
TCTTTCAGTGAATGAATCAA+GGG + chr7_1:76275529-76275548 Msa1039150:intron 30.0%
! AATTTTTCGTCATTTCCACA+AGG - chr7_1:76275621-76275640 None:intergenic 30.0%
! ATTTCTAATTTTTCCTGCCA+TGG + chr7_1:76275654-76275673 Msa1039150:three_prime_UTR 30.0%
GTTTAAATCCTTTAGTCAGA+GGG + chr7_1:76275678-76275697 Msa1039150:three_prime_UTR 30.0%
CTTTGACATAATCTTCCTTA+GGG - chr7_1:76275777-76275796 None:intergenic 30.0%
ACTTTGACATAATCTTCCTT+AGG - chr7_1:76275778-76275797 None:intergenic 30.0%
TATGTCAAAGTCAATTGTGA+TGG + chr7_1:76275787-76275806 Msa1039150:three_prime_UTR 30.0%
AGGATGTTAGGTCAAAAATT+GGG - chr7_1:76275875-76275894 None:intergenic 30.0%
TAGGATGTTAGGTCAAAAAT+TGG - chr7_1:76275876-76275895 None:intergenic 30.0%
ATGTATGAATGTAGGATGTT+AGG - chr7_1:76275887-76275906 None:intergenic 30.0%
GAAAAGTCAAAGACTATTCA+GGG - chr7_1:76275917-76275936 None:intergenic 30.0%
TGAAAAGTCAAAGACTATTC+AGG - chr7_1:76275918-76275937 None:intergenic 30.0%
ACATGTAAAAATGGCATGAT+TGG - chr7_1:76276556-76276575 None:intergenic 30.0%
!! TTGAATGAGATTGATGGTTT+TGG - chr7_1:76276615-76276634 None:intergenic 30.0%
TTGGTTTAATGCACTTTGAT+GGG - chr7_1:76276641-76276660 None:intergenic 30.0%
! ATTGGTTTAATGCACTTTGA+TGG - chr7_1:76276642-76276661 None:intergenic 30.0%
AGCTCTATTTATAGGTTCTA+GGG - chr7_1:76276682-76276701 None:intergenic 30.0%
! GCAATAAAAATAAAAGTGCG+TGG - chr7_1:76277133-76277152 None:intergenic 30.0%
GATCACTTGATTGAAAATCA+AGG - chr7_1:76277239-76277258 None:intergenic 30.0%
! AACAAATTCTTTTTGCCACT+TGG + chr7_1:76277345-76277364 Msa1039150:intron 30.0%
! GTAGAGTACTACGAATATTT+AGG + chr7_1:76277609-76277628 Msa1039150:intron 30.0%
! ATTGAAAAGATTTAGGGTTC+GGG - chr7_1:76277666-76277685 None:intergenic 30.0%
CCCCATATTGAAAAGATTTA+GGG - chr7_1:76277672-76277691 None:intergenic 30.0%
! CCCTAAATCTTTTCAATATG+GGG + chr7_1:76277669-76277688 Msa1039150:intron 30.0%
ACCCCATATTGAAAAGATTT+AGG - chr7_1:76277673-76277692 None:intergenic 30.0%
AGATACTCACTACTTTATAG+TGG - chr7_1:76277893-76277912 None:intergenic 30.0%
! GAACACTTGATAGTTATTAC+AGG - chr7_1:76277939-76277958 None:intergenic 30.0%
TTAAACATTCTTTGGATTCC+TGG + chr7_1:76277966-76277985 Msa1039150:three_prime_UTR 30.0%
! TAAGAGTACACATTTAGAAG+TGG + chr7_1:76278054-76278073 Msa1039150:three_prime_UTR 30.0%
GAAATAGAAAGAAATAGCAG+AGG - chr7_1:76278125-76278144 None:intergenic 30.0%
!! ACAGTTGGTCTTACCATAAT+GGG + chr7_1:76273497-76273516 Msa1039150:exon 35.0%
AAAACAAGAACGAATTGCAG+AGG + chr7_1:76273611-76273630 Msa1039150:CDS 35.0%
! TCGAAAAGCGGCTTTAATTT+CGG - chr7_1:76273708-76273727 None:intergenic 35.0%
TGATACTTTGGATCGAAAAG+CGG - chr7_1:76273720-76273739 None:intergenic 35.0%
! TATGATGTGTGGTAGTGAAT+AGG - chr7_1:76273954-76273973 None:intergenic 35.0%
ACTATGCTGTATATGATGTG+TGG - chr7_1:76273965-76273984 None:intergenic 35.0%
! TCTGCAGTAAAAAAGCATGA+AGG - chr7_1:76274012-76274031 None:intergenic 35.0%
! AATTTGTGATGGTGTGTAGT+TGG - chr7_1:76274041-76274060 None:intergenic 35.0%
!!! TGCTGACTTTTCACTTTTCA+GGG + chr7_1:76274149-76274168 Msa1039150:intron 35.0%
TTCACATTTGTCTCTTCAAC+TGG + chr7_1:76274542-76274561 Msa1039150:CDS 35.0%
CAACAACTGTTTATAGGTCA+TGG + chr7_1:76274746-76274765 Msa1039150:intron 35.0%
ACAACTGTTTATAGGTCATG+GGG + chr7_1:76274748-76274767 Msa1039150:intron 35.0%
CATAATGAATGCAACTTCTC+GGG - chr7_1:76274808-76274827 None:intergenic 35.0%
! CCCATCACAGAGAATTATTT+TGG + chr7_1:76274832-76274851 Msa1039150:CDS 35.0%
!!! TCTTCTTTGGCTTTTGGTAT+CGG - chr7_1:76275244-76275263 None:intergenic 35.0%
!!! TGGTTTTCTTCTTTGGCTTT+TGG - chr7_1:76275250-76275269 None:intergenic 35.0%
! AACATGCTGGGTTGAAAATT+TGG - chr7_1:76275270-76275289 None:intergenic 35.0%
TCAGTGCTATCTATAGTTTG+GGG - chr7_1:76275323-76275342 None:intergenic 35.0%
CTCAGTGCTATCTATAGTTT+GGG - chr7_1:76275324-76275343 None:intergenic 35.0%
TCTCAGTGCTATCTATAGTT+TGG - chr7_1:76275325-76275344 None:intergenic 35.0%
TTTCAGAATACTGAGGTGTA+AGG - chr7_1:76275408-76275427 None:intergenic 35.0%
GTAAGCTACTTACTACAATC+GGG + chr7_1:76275431-76275450 Msa1039150:intron 35.0%
AAAAGTCGTGTAGTGAGATT+TGG - chr7_1:76275598-76275617 None:intergenic 35.0%
ACTAAAGGATTTAAACGCCA+TGG - chr7_1:76275674-76275693 None:intergenic 35.0%
CGTTTAAATCCTTTAGTCAG+AGG + chr7_1:76275677-76275696 Msa1039150:three_prime_UTR 35.0%
! CTGTATTTGATAACACTTGC+AGG + chr7_1:76275706-76275725 Msa1039150:three_prime_UTR 35.0%
! TATTTGATAACACTTGCAGG+TGG + chr7_1:76275709-76275728 Msa1039150:three_prime_UTR 35.0%
GGATGTTAGGTCAAAAATTG+GGG - chr7_1:76275874-76275893 None:intergenic 35.0%
GTCAGACAATGTATGAATGT+AGG - chr7_1:76275895-76275914 None:intergenic 35.0%
CAAAGGAAATTTCAGCAGAA+AGG + chr7_1:76275936-76275955 Msa1039150:intron 35.0%
! TTTTGGACTCATTGACACTT+TGG - chr7_1:76276193-76276212 None:intergenic 35.0%
!! GGAAAAATATTTTGGACACC+TGG - chr7_1:76276224-76276243 None:intergenic 35.0%
! GGCTTGGAGGAAAAATATTT+TGG - chr7_1:76276232-76276251 None:intergenic 35.0%
!!! TTTTGACTCTGCACTGATTA+TGG - chr7_1:76276258-76276277 None:intergenic 35.0%
!! CTTTCTTCCCATTTTTCATC+AGG + chr7_1:76276278-76276297 Msa1039150:intron 35.0%
TGTAAAAATGGCATGATTGG+TGG - chr7_1:76276553-76276572 None:intergenic 35.0%
GGAGAGTTGACATGTAAAAA+TGG - chr7_1:76276565-76276584 None:intergenic 35.0%
GGGAATTTGAATGAGATTGA+TGG - chr7_1:76276621-76276640 None:intergenic 35.0%
!! GTTCTAGGGTTGATGAAAAA+TGG - chr7_1:76276668-76276687 None:intergenic 35.0%
GAGCTCTATTTATAGGTTCT+AGG - chr7_1:76276683-76276702 None:intergenic 35.0%
AGGATGAGAGCTCTATTTAT+AGG - chr7_1:76276690-76276709 None:intergenic 35.0%
! TTTGGTGTGTGAAATTGTGA+AGG - chr7_1:76276710-76276729 None:intergenic 35.0%
! TGACAACTCAAGAGAACTTT+TGG - chr7_1:76276728-76276747 None:intergenic 35.0%
AAGGGACAAAAATTACCGAA+GGG - chr7_1:76276856-76276875 None:intergenic 35.0%
! TTCGGTAATTTTTGTCCCTT+CGG + chr7_1:76276856-76276875 Msa1039150:intron 35.0%
GTTTAAAGAGAAAAGCCAAG+TGG - chr7_1:76277363-76277382 None:intergenic 35.0%
AGGATCAAAATCACGTAGTT+CGG - chr7_1:76277438-76277457 None:intergenic 35.0%
!! TACGTGATTTTGATCCTTCA+CGG + chr7_1:76277441-76277460 Msa1039150:intron 35.0%
! TTGAAAAGATTTAGGGTTCG+GGG - chr7_1:76277665-76277684 None:intergenic 35.0%
!! TTTGGTGTTTGGTTTCTCTA+TGG + chr7_1:76277817-76277836 Msa1039150:three_prime_UTR 35.0%
TGACTCTTATTCCATCATTG+TGG + chr7_1:76277844-76277863 Msa1039150:three_prime_UTR 35.0%
ACGTAATACAACCACAATGA+TGG - chr7_1:76277858-76277877 None:intergenic 35.0%
! AGTAGTGAGTATCTTTTCAC+AGG + chr7_1:76277899-76277918 Msa1039150:three_prime_UTR 35.0%
AAAATCTGAACATAGAGCAG+AGG - chr7_1:76278095-76278114 None:intergenic 35.0%
ACTTCGACTTACTTTCCCAT+AGG - chr7_1:76273472-76273491 None:intergenic 40.0%
ATGGGAAAGTAAGTCGAAGT+TGG + chr7_1:76273472-76273491 Msa1039150:five_prime_UTR 40.0%
!! CACAGTTGGTCTTACCATAA+TGG + chr7_1:76273496-76273515 Msa1039150:exon 40.0%
! TTACCATAATGGGATCGTTC+AGG + chr7_1:76273507-76273526 Msa1039150:exon 40.0%
ACACAGACAAAGGAAAAGTG+CGG - chr7_1:76273580-76273599 None:intergenic 40.0%
! AAAAGCGGCTTTAATTTCGG+CGG - chr7_1:76273705-76273724 None:intergenic 40.0%
! TTTTCATCTCTGTTGAGGTC+TGG - chr7_1:76273840-76273859 None:intergenic 40.0%
CCTGGTATGCTTGAATTACA+CGG - chr7_1:76273890-76273909 None:intergenic 40.0%
AGTAAGTACCAAGTAGTACC+TGG - chr7_1:76273908-76273927 None:intergenic 40.0%
CTGAAAAGTGAAAAGTCAGC+AGG - chr7_1:76274150-76274169 None:intergenic 40.0%
!!! CTGCTGACTTTTCACTTTTC+AGG + chr7_1:76274148-76274167 Msa1039150:intron 40.0%
AGATCAAAAGCTTCACACTC+TGG - chr7_1:76274198-76274217 None:intergenic 40.0%
! ATTAAAGGTGTGTCCAGTGT+AGG - chr7_1:76274365-76274384 None:intergenic 40.0%
ACACCTTTAATCTGCAAGTG+TGG + chr7_1:76274374-76274393 Msa1039150:intron 40.0%
TACAATGTCTCAACGTCACT+TGG + chr7_1:76274419-76274438 Msa1039150:intron 40.0%
ACAATGTCTCAACGTCACTT+GGG + chr7_1:76274420-76274439 Msa1039150:intron 40.0%
! AGCTTGTTCAAATTCCTGTG+TGG + chr7_1:76274502-76274521 Msa1039150:intron 40.0%
! GAGACAAATGTGAAAGCATG+AGG - chr7_1:76274536-76274555 None:intergenic 40.0%
!! TTTTGGAGGAGCTACTTAAC+AGG + chr7_1:76274849-76274868 Msa1039150:CDS 40.0%
!!! TTTTTTTACTTGGTGGGCTG+TGG + chr7_1:76274907-76274926 Msa1039150:intron 40.0%
CTAAAACCAGTCAACATGCT+GGG - chr7_1:76275282-76275301 None:intergenic 40.0%
! TAAGATTTTGCAACGGATGG+CGG + chr7_1:76275486-76275505 Msa1039150:intron 40.0%
! AGTCAATTGTGATGGTTCTG+TGG + chr7_1:76275795-76275814 Msa1039150:three_prime_UTR 40.0%
! ATGGTTCTGTGGTTGACTTT+GGG + chr7_1:76275806-76275825 Msa1039150:three_prime_UTR 40.0%
GAGTCCAAAATTAAGTGTCC+AGG + chr7_1:76276203-76276222 Msa1039150:intron 40.0%
! GACACCTGGACACTTAATTT+TGG - chr7_1:76276210-76276229 None:intergenic 40.0%
ACGCGTTCCTGATGAAAAAT+GGG - chr7_1:76276288-76276307 None:intergenic 40.0%
AACGCGTTCCTGATGAAAAA+TGG - chr7_1:76276289-76276308 None:intergenic 40.0%
CGTCAACACAAGCTAAATGA+GGG - chr7_1:76276770-76276789 None:intergenic 40.0%
TCGTCAACACAAGCTAAATG+AGG - chr7_1:76276771-76276790 None:intergenic 40.0%
!!! CTCTCTTTTTTCTGTCCCTT+CGG + chr7_1:76276807-76276826 Msa1039150:intron 40.0%
GAAGGGACAAAAATTACCGA+AGG - chr7_1:76276857-76276876 None:intergenic 40.0%
AAAAGAAAGGGACAACCGAA+GGG - chr7_1:76276874-76276893 None:intergenic 40.0%
TAAAAGAAAGGGACAACCGA+AGG - chr7_1:76276875-76276894 None:intergenic 40.0%
! TGGATTTTTGTCGTGACGTT+GGG - chr7_1:76277113-76277132 None:intergenic 40.0%
!! ACGTGATTTTGATCCTTCAC+GGG + chr7_1:76277442-76277461 Msa1039150:intron 40.0%
!! GGGTTGGTTATATTTAGGGA+AGG - chr7_1:76277644-76277663 None:intergenic 40.0%
!! TCGGGGGTTGGTTATATTTA+GGG - chr7_1:76277648-76277667 None:intergenic 40.0%
!! TTCGGGGGTTGGTTATATTT+AGG - chr7_1:76277649-76277668 None:intergenic 40.0%
! TGAAAAGATTTAGGGTTCGG+GGG - chr7_1:76277664-76277683 None:intergenic 40.0%
!! CTACGGATGAATTTGGTGTT+TGG + chr7_1:76277806-76277825 Msa1039150:intron 40.0%
GCACTCTGTCATCCAGAAAA+TGG + chr7_1:76273432-76273451 Msa1039150:five_prime_UTR 45.0%
! GGGTGAAGTGAACCATTTTC+TGG - chr7_1:76273447-76273466 None:intergenic 45.0%
GACTTACTTTCCCATAGGAG+GGG - chr7_1:76273467-76273486 None:intergenic 45.0%
CGACTTACTTTCCCATAGGA+GGG - chr7_1:76273468-76273487 None:intergenic 45.0%
TCGACTTACTTTCCCATAGG+AGG - chr7_1:76273469-76273488 None:intergenic 45.0%
AAGTCGAAGTTGGACACAGT+TGG + chr7_1:76273482-76273501 Msa1039150:five_prime_UTR 45.0%
CAACCTGAACGATCCCATTA+TGG - chr7_1:76273513-76273532 None:intergenic 45.0%
AATTGCAGAGGCAGAGAAGA+TGG + chr7_1:76273623-76273642 Msa1039150:CDS 45.0%
CCGTGTAATTCAAGCATACC+AGG + chr7_1:76273887-76273906 Msa1039150:CDS 45.0%
CAAGCATACCAGGTACTACT+TGG + chr7_1:76273897-76273916 Msa1039150:intron 45.0%
TCACACTCTGGTCTGTCAAA+GGG - chr7_1:76274186-76274205 None:intergenic 45.0%
TTCACACTCTGGTCTGTCAA+AGG - chr7_1:76274187-76274206 None:intergenic 45.0%
! GAGTTTCTTTGTGTCGGCAA+AGG + chr7_1:76274228-76274247 Msa1039150:CDS 45.0%
! TTCTTTGTGTCGGCAAAGGT+AGG + chr7_1:76274232-76274251 Msa1039150:intron 45.0%
TAGACCACATATATCGGTGC+AGG + chr7_1:76274323-76274342 Msa1039150:intron 45.0%
GCTCCACACTTGCAGATTAA+AGG - chr7_1:76274380-76274399 None:intergenic 45.0%
TACCAAGTTCAGTGTGCTGT+TGG + chr7_1:76274776-76274795 Msa1039150:CDS 45.0%
ACCCTATGATACATCAGCTG+AGG + chr7_1:76275172-76275191 Msa1039150:CDS 45.0%
GCCTCAGCTGATGTATCATA+GGG - chr7_1:76275176-76275195 None:intergenic 45.0%
TGCCTCAGCTGATGTATCAT+AGG - chr7_1:76275177-76275196 None:intergenic 45.0%
TTTCAACCCAGCATGTTGAC+TGG + chr7_1:76275273-76275292 Msa1039150:CDS 45.0%
GCTAAAACCAGTCAACATGC+TGG - chr7_1:76275283-76275302 None:intergenic 45.0%
AGTTTGGGGAGTGAAGACAT+GGG - chr7_1:76275309-76275328 None:intergenic 45.0%
TAGTTTGGGGAGTGAAGACA+TGG - chr7_1:76275310-76275329 None:intergenic 45.0%
GATTGCTGATGAGACAGTCA+TGG + chr7_1:76275343-76275362 Msa1039150:three_prime_UTR 45.0%
! AAGATTTTGCAACGGATGGC+GGG + chr7_1:76275487-76275506 Msa1039150:intron 45.0%
! CACTACACGACTTTTCCTTG+TGG + chr7_1:76275603-76275622 Msa1039150:three_prime_UTR 45.0%
AAGGATTTAAACGCCATGGC+AGG - chr7_1:76275670-76275689 None:intergenic 45.0%
! GATGGTTCTGTGGTTGACTT+TGG + chr7_1:76275805-76275824 Msa1039150:three_prime_UTR 45.0%
!! TGTGGTTGACTTTGGGATCA+AGG + chr7_1:76275813-76275832 Msa1039150:three_prime_UTR 45.0%
TGGGATCAAGGCATATACTG+TGG + chr7_1:76275825-76275844 Msa1039150:three_prime_UTR 45.0%
!! ACTCTGCACTGATTATGGCA+TGG - chr7_1:76276253-76276272 None:intergenic 45.0%
CGAAGGGACAAAATTCCGAA+GGG - chr7_1:76276840-76276859 None:intergenic 45.0%
! CCTTCGGAATTTTGTCCCTT+CGG + chr7_1:76276838-76276857 Msa1039150:intron 45.0%
! GTGGATTTTTGTCGTGACGT+TGG - chr7_1:76277114-76277133 None:intergenic 45.0%
TTTCGGAGGTCAAGGCTATT+TGG - chr7_1:76277774-76277793 None:intergenic 45.0%
!!! CGTAGTGTCGCGTCATTTTT+CGG - chr7_1:76277791-76277810 None:intergenic 45.0%
CGAAAAATGACGCGACACTA+CGG + chr7_1:76277789-76277808 Msa1039150:intron 45.0%
!! TTATAAAATTAAATAAAAGA+TGG - chr7_1:76276073-76276092 None:intergenic 5.0%
GTTCACTTCACCCCTCCTAT+GGG + chr7_1:76273454-76273473 Msa1039150:five_prime_UTR 50.0%
TAAGCAGAGGAAGTGGACAG+AGG - chr7_1:76273650-76273669 None:intergenic 50.0%
CATCTCTGTTGAGGTCTGGA+TGG - chr7_1:76273836-76273855 None:intergenic 50.0%
! GTGTCCTGCACCGATATATG+TGG - chr7_1:76274330-76274349 None:intergenic 50.0%
CTGCATGCAATGTCCTACAC+TGG + chr7_1:76274349-76274368 Msa1039150:intron 50.0%
! ATGAGGTGCTCTTTCCACAC+AGG - chr7_1:76274519-76274538 None:intergenic 50.0%
ACAGCACGTGCATCTTCTCA+AGG + chr7_1:76274566-76274585 Msa1039150:CDS 50.0%
GTCCAACAGCACACTGAACT+TGG - chr7_1:76274781-76274800 None:intergenic 50.0%
! AGATTTTGCAACGGATGGCG+GGG + chr7_1:76275488-76275507 Msa1039150:intron 50.0%
ACGTGAATGCGTGATACTGC+AGG + chr7_1:76275568-76275587 Msa1039150:intron 50.0%
CAGCTACTCCCTCTGACTAA+AGG - chr7_1:76275689-76275708 None:intergenic 50.0%
ATCTTCCTTAGGGTCACTCC+AGG - chr7_1:76275767-76275786 None:intergenic 50.0%
! CCTCATGTTTGGTTCCGAGT+CGG + chr7_1:76275971-76275990 Msa1039150:intron 50.0%
! CTCATGTTTGGTTCCGAGTC+GGG + chr7_1:76275972-76275991 Msa1039150:intron 50.0%
! CTGATTATGGCATGGCTTGG+AGG - chr7_1:76276245-76276264 None:intergenic 50.0%
!! GCACTGATTATGGCATGGCT+TGG - chr7_1:76276248-76276267 None:intergenic 50.0%
CCGAAGGGACTTATTCCGAA+GGG - chr7_1:76276825-76276844 None:intergenic 50.0%
CCCTTCGGAATAAGTCCCTT+CGG + chr7_1:76276822-76276841 Msa1039150:intron 50.0%
TCCGAAGGGACTTATTCCGA+AGG - chr7_1:76276826-76276845 None:intergenic 50.0%
CCGAAGGGACAAAATTCCGA+AGG - chr7_1:76276841-76276860 None:intergenic 50.0%
TTGATCCTTCACGGGTACGT+AGG + chr7_1:76277450-76277469 Msa1039150:intron 50.0%
! AAGATTTAGGGTTCGGGGGT+TGG - chr7_1:76277660-76277679 None:intergenic 50.0%
!!! GCGTCATTTTTCGGAGGTCA+AGG - chr7_1:76277782-76277801 None:intergenic 50.0%
!!! AGTGTCGCGTCATTTTTCGG+AGG - chr7_1:76277788-76277807 None:intergenic 50.0%
CGCGACACTACGGATGAATT+TGG + chr7_1:76277799-76277818 Msa1039150:intron 50.0%
GGTTCACTTCACCCCTCCTA+TGG + chr7_1:76273453-76273472 Msa1039150:five_prime_UTR 55.0%
GACGGTGTAAGCAGAGGAAG+TGG - chr7_1:76273657-76273676 None:intergenic 55.0%
TCCTCTGCTTACACCGTCCT+CGG + chr7_1:76273659-76273678 Msa1039150:CDS 55.0%
!! GTTAGGTTGGACTCCGAGGA+CGG - chr7_1:76273675-76273694 None:intergenic 55.0%
!! AGCAGTTAGGTTGGACTCCG+AGG - chr7_1:76273679-76273698 None:intergenic 55.0%
ATTTCGGCGGCTGAGCAGTT+AGG - chr7_1:76273692-76273711 None:intergenic 55.0%
ACCATGCCAATACTGCTGCC+TGG + chr7_1:76275746-76275765 Msa1039150:three_prime_UTR 55.0%
!! TCCAGGCAGCAGTATTGGCA+TGG - chr7_1:76275750-76275769 None:intergenic 55.0%
GTCACTCCAGGCAGCAGTAT+TGG - chr7_1:76275755-76275774 None:intergenic 55.0%
!! CCGACTCGGAACCAAACATG+AGG - chr7_1:76275974-76275993 None:intergenic 55.0%
CTTTGCCTACGTACCCGTGA+AGG - chr7_1:76277458-76277477 None:intergenic 55.0%
CTTCACGGGTACGTAGGCAA+AGG + chr7_1:76277456-76277475 Msa1039150:intron 55.0%
TCCGAGGACGGTGTAAGCAG+AGG - chr7_1:76273663-76273682 None:intergenic 60.0%
TGCTGCCTGGAGTGACCCTA+AGG + chr7_1:76275759-76275778 Msa1039150:three_prime_UTR 60.0%
CGGCGGCTGAGCAGTTAGGT+TGG - chr7_1:76273688-76273707 None:intergenic 65.0%
!! TGCAACGGATGGCGGGGAAG+TGG + chr7_1:76275494-76275513 Msa1039150:intron 65.0%
AGAGCGAAGAGGGCCCGACT+CGG - chr7_1:76275988-76276007 None:intergenic 65.0%
!! ACGGATGGCGGGGAAGTGGC+AGG + chr7_1:76275498-76275517 Msa1039150:intron 70.0%
!! CGGATGGCGGGGAAGTGGCA+GGG + chr7_1:76275499-76275518 Msa1039150:intron 70.0%
!! GGATGGCGGGGAAGTGGCAG+GGG + chr7_1:76275500-76275519 Msa1039150:intron 70.0%
!! GATGGCGGGGAAGTGGCAGG+GGG + chr7_1:76275501-76275520 Msa1039150:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 76273419 76278193 76273419 ID=Msa1039150;Name=Msa1039150
chr7_1 mRNA 76273419 76278193 76273419 ID=Msa1039150-mRNA-1;Parent=Msa1039150;Name=Msa1039150-mRNA-1;_AED=0.32;_eAED=0.32;_QI=96|1|1|1|0.75|0.66|9|786|252
chr7_1 exon 76273419 76273733 76273419 ID=Msa1039150-mRNA-1:exon:19722;Parent=Msa1039150-mRNA-1
chr7_1 exon 76273822 76273908 76273822 ID=Msa1039150-mRNA-1:exon:19723;Parent=Msa1039150-mRNA-1
chr7_1 exon 76274031 76274068 76274031 ID=Msa1039150-mRNA-1:exon:19724;Parent=Msa1039150-mRNA-1
chr7_1 exon 76274170 76274249 76274170 ID=Msa1039150-mRNA-1:exon:19725;Parent=Msa1039150-mRNA-1
chr7_1 exon 76274504 76274587 76274504 ID=Msa1039150-mRNA-1:exon:19726;Parent=Msa1039150-mRNA-1
chr7_1 exon 76274762 76274870 76274762 ID=Msa1039150-mRNA-1:exon:19727;Parent=Msa1039150-mRNA-1
chr7_1 exon 76275160 76275430 76275160 ID=Msa1039150-mRNA-1:exon:19728;Parent=Msa1039150-mRNA-1
chr7_1 exon 76275590 76275862 76275590 ID=Msa1039150-mRNA-1:exon:19729;Parent=Msa1039150-mRNA-1
chr7_1 exon 76277810 76278193 76277810 ID=Msa1039150-mRNA-1:exon:19730;Parent=Msa1039150-mRNA-1
chr7_1 five_prime_UTR 76273419 76273514 76273419 ID=Msa1039150-mRNA-1:five_prime_utr;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76273515 76273733 76273515 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76273822 76273908 76273822 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76274031 76274068 76274031 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76274170 76274249 76274170 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76274504 76274587 76274504 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76274762 76274870 76274762 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 CDS 76275160 76275301 76275160 ID=Msa1039150-mRNA-1:cds;Parent=Msa1039150-mRNA-1
chr7_1 three_prime_UTR 76275302 76275430 76275302 ID=Msa1039150-mRNA-1:three_prime_utr;Parent=Msa1039150-mRNA-1
chr7_1 three_prime_UTR 76275590 76275862 76275590 ID=Msa1039150-mRNA-1:three_prime_utr;Parent=Msa1039150-mRNA-1
chr7_1 three_prime_UTR 76277810 76278193 76277810 ID=Msa1039150-mRNA-1:three_prime_utr;Parent=Msa1039150-mRNA-1
Gene Sequence

>Msa1039150

ATGGGATCGTTCAGGTTGTTTAGCTTCAACTTAACAACAACAACAACTTCTATGTTTGTAAACCGCACTTTTCCTTTGTCTGTGTCTTTAAAGAATAAAACAAGAACGAATTGCAGAGGCAGAGAAGATGGTCCTCTGTCCACTTCCTCTGCTTACACCGTCCTCGGAGTCCAACCTAACTGCTCAGCCGCCGAAATTAAAGCCGCTTTTCGATCCAAAGTAAAACAGTTCCATCCAGACCTCAACAGAGATGAAAATGAAACATATTCTGATGCTATGATTCGCCGTGTAATTCAAGCATACCAGATACTATCCAACTACACACCATCACAAATTATTGAAACGGAGTGCTTAGATCCCTTTGACAGACCAGAGTGTGAAGCTTTTGATCTTTTCGTTAATGAGTTTCTTTGTGTCGGCAAAGCTTGTTCAAATTCCTGTGTGGAAAGAGCACCTCATGCTTTCACATTTGTCTCTTCAACTGGAACAGCACGTGCATCTTCTCAAGGTCATGGGGAAGACTACCAAGTTCAGTGTGCTGTTGGACAATGCCCGAGAAGTTGCATTCATTATGTAACCCCATCACAGAGAATTATTTTGGAGGAGCTACTTAACAGTATAATAGATGCACCCTATGATACATCAGCTGAGGCAGACTTGCTCTATTCACTTATAACCAAAGCTAAGTTTGAGAATAACCGATACCAAAAGCCAAAGAAGAAAACCAAATTTTCAACCCAGCATGTTGACTGGTTTTAG

Protein sequence

>Msa1039150

MGSFRLFSFNLTTTTTSMFVNRTFPLSVSLKNKTRTNCRGREDGPLSTSSAYTVLGVQPNCSAAEIKAAFRSKVKQFHPDLNRDENETYSDAMIRRVIQAYQILSNYTPSQIIETECLDPFDRPECEAFDLFVNEFLCVGKACSNSCVERAPHAFTFVSSTGTARASSQGHGEDYQVQCAVGQCPRSCIHYVTPSQRIILEELLNSIIDAPYDTSAEADLLYSLITKAKFENNRYQKPKKKTKFSTQHVDWF*