AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475690 MtrunA17_Chr3g0133011 87.525 497 47 3 1 483 1 496 0.0 897
Msa0475690 MtrunA17_Chr2g0285351 64.392 469 143 6 29 483 11 469 0.0 621
Msa0475690 MtrunA17_Chr2g0285371 64.035 456 141 6 43 483 22 469 0.0 598
Msa0475690 MtrunA17_Chr2g0285381 62.363 457 142 7 42 483 24 465 0.0 577
Msa0475690 MtrunA17_Chr4g0009701 60.948 443 148 6 54 483 40 470 0.0 556
Msa0475690 MtrunA17_Chr4g0009681 58.244 467 168 7 30 483 15 467 0.0 548
Msa0475690 MtrunA17_Chr4g0009661 58.014 443 161 6 54 483 40 470 0.0 540
Msa0475690 MtrunA17_Chr4g0009711 58.691 443 158 6 54 483 40 470 0.0 536
Msa0475690 MtrunA17_Chr4g0009651 57.111 443 165 6 54 483 40 470 0.0 527
Msa0475690 MtrunA17_Chr4g0009671 57.534 438 159 7 60 483 11 435 0.0 514
Msa0475690 MtrunA17_Chr4g0009641 56.885 443 142 7 54 483 40 446 5.68e-178 506
Msa0475690 MtrunA17_Chr4g0009721 49.679 467 161 8 30 483 14 419 1.89e-155 448
Msa0475690 MtrunA17_Chr3g0093971 40.583 446 227 6 52 479 25 450 1.58e-118 355
Msa0475690 MtrunA17_Chr8g0338461 38.586 495 254 8 32 483 8 495 6.31e-111 337
Msa0475690 MtrunA17_Chr7g0249431 38.153 498 254 14 26 478 5 493 3.93e-107 327
Msa0475690 MtrunA17_Chr7g0234051 36.111 504 270 8 23 483 1 495 2.04e-106 325
Msa0475690 MtrunA17_Chr7g0234041 34.110 472 226 15 34 447 5 449 9.37e-77 248
Msa0475690 MtrunA17_Chr2g0281621 29.622 476 287 17 26 478 9 459 6.29e-53 185
Msa0475690 MtrunA17_Chr4g0038311 29.936 471 292 13 31 483 12 462 5.30e-52 182
Msa0475690 MtrunA17_Chr4g0047861 32.301 452 259 16 51 478 51 479 1.31e-49 176
Msa0475690 MtrunA17_Chr8g0385871 29.668 482 280 17 31 483 10 461 2.32e-49 175
Msa0475690 MtrunA17_Chr2g0309541 27.521 476 295 14 26 479 11 458 4.15e-49 175
Msa0475690 MtrunA17_Chr2g0318911 29.607 483 286 17 20 479 7 458 5.14e-49 174
Msa0475690 MtrunA17_Chr1g0199971 26.971 482 302 13 19 480 1 452 4.37e-48 172
Msa0475690 MtrunA17_Chr7g0219051 28.866 485 297 18 21 483 5 463 5.77e-48 172
Msa0475690 MtrunA17_Chr2g0309511 28.842 475 286 16 29 478 9 456 1.38e-47 171
Msa0475690 MtrunA17_Chr2g0309521 27.368 475 293 15 29 478 9 456 2.44e-46 167
Msa0475690 MtrunA17_Chr2g0279371 45.455 176 77 1 52 227 26 182 2.47e-46 159
Msa0475690 MtrunA17_Chr4g0068841 28.106 491 295 17 26 479 3 472 2.59e-46 167
Msa0475690 MtrunA17_Chr3g0131731 28.294 463 260 14 57 483 34 460 9.75e-46 166
Msa0475690 MtrunA17_Chr3g0126031 28.270 474 285 15 28 478 9 450 1.64e-45 165
Msa0475690 MtrunA17_Chr1g0199991 28.421 475 289 14 27 480 8 452 1.89e-45 164
Msa0475690 MtrunA17_Chr3g0118851 31.136 440 249 16 57 478 81 484 3.87e-45 164
Msa0475690 MtrunA17_Chr7g0221551 27.010 485 288 14 28 483 9 456 4.81e-44 161
Msa0475690 MtrunA17_Chr5g0431301 27.815 453 278 16 52 479 28 456 2.05e-43 159
Msa0475690 MtrunA17_Chr3g0118841 29.680 438 257 12 57 478 82 484 8.90e-43 158
Msa0475690 MtrunA17_Chr3g0118831 29.099 433 250 12 50 478 74 453 4.60e-42 155
Msa0475690 MtrunA17_Chr4g0068861 28.200 461 275 16 13 439 38 476 4.74e-42 155
Msa0475690 MtrunA17_Chr3g0126051 28.000 450 274 17 53 478 34 457 5.68e-42 155
Msa0475690 MtrunA17_Chr2g0304931 28.806 427 245 15 81 478 60 456 1.60e-40 151
Msa0475690 MtrunA17_Chr3g0094811 26.829 492 295 16 18 483 1 453 2.38e-40 150
Msa0475690 MtrunA17_Chr3g0090331 26.386 451 283 12 50 483 71 489 3.04e-40 151
Msa0475690 MtrunA17_Chr3g0118881 29.333 450 252 14 57 478 81 492 7.36e-40 150
Msa0475690 MtrunA17_Chr3g0118891 29.577 426 241 13 57 478 81 451 1.26e-39 149
Msa0475690 MtrunA17_Chr3g0118861 28.953 449 241 13 50 478 72 462 1.84e-39 149
Msa0475690 MtrunA17_Chr1g0153881 30.134 448 252 14 50 478 86 491 3.38e-39 148
Msa0475690 MtrunA17_Chr4g0020241 27.051 451 278 13 50 483 70 486 4.28e-39 148
Msa0475690 MtrunA17_Chr4g0028271 27.184 412 254 10 84 478 109 491 4.68e-39 148
Msa0475690 MtrunA17_Chr2g0281641 29.073 399 239 14 110 483 7 386 3.55e-36 138
Msa0475690 MtrunA17_Chr2g0279381 34.762 210 129 2 240 441 2 211 6.17e-36 132
Msa0475690 MtrunA17_Chr1g0153941 26.987 478 259 16 48 478 72 506 1.02e-34 136
Msa0475690 MtrunA17_Chr4g0028261 25.182 413 264 9 83 478 129 513 1.02e-33 133
Msa0475690 MtrunA17_Chr1g0204191 25.681 514 284 19 3 483 41 489 5.93e-33 130
Msa0475690 MtrunA17_Chr2g0327401 25.285 439 283 11 57 478 85 495 1.22e-32 130
Msa0475690 MtrunA17_Chr4g0028281 37.805 164 96 1 84 247 107 264 5.03e-32 128
Msa0475690 MtrunA17_Chr4g0028241 24.941 421 258 7 84 479 101 488 9.68e-32 127
Msa0475690 MtrunA17_Chr1g0171411 34.197 193 121 1 83 275 94 280 2.85e-30 123
Msa0475690 MtrunA17_Chr2g0327381 33.778 225 133 6 57 275 79 293 6.24e-30 122
Msa0475690 MtrunA17_Chr1g0199171 33.161 193 122 2 83 275 101 286 1.80e-29 120
Msa0475690 MtrunA17_Chr2g0327371 33.333 219 120 4 57 275 79 271 2.79e-27 114
Msa0475690 MtrunA17_Chr5g0447441 25.000 448 241 18 69 478 42 432 6.40e-26 110
Msa0475690 MtrunA17_Chr1g0165811 31.667 240 134 8 45 277 22 238 4.04e-24 101
Msa0475690 MtrunA17_Chr1g0153931 35.979 189 107 6 54 238 76 254 3.11e-22 96.3
Msa0475690 MtrunA17_Chr2g0285401 69.565 46 14 0 402 447 45 90 4.26e-19 82.0
Msa0475690 MtrunA17_Chr4g0044051 24.057 424 273 13 70 478 47 436 9.22e-19 88.6
Msa0475690 MtrunA17_Chr6g0457241 55.357 56 25 0 408 463 1 56 3.82e-16 72.4
Msa0475690 MtrunA17_Chr1g0153921 26.316 228 130 9 263 478 9 210 5.90e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475690 AT1G33540.1 54.139 447 183 4 51 483 26 464 1.08e-175 501
Msa0475690 AT1G33540.2 53.756 426 175 4 72 483 4 421 5.65e-165 473
Msa0475690 AT5G09640.1 52.542 472 194 10 30 483 6 465 8.10e-165 474
Msa0475690 AT3G10450.1 52.784 449 165 4 48 483 23 437 2.46e-164 472
Msa0475690 AT1G73300.1 53.363 446 161 4 51 483 30 441 2.66e-162 467
Msa0475690 AT1G73300.2 53.363 446 161 4 51 483 30 441 2.66e-162 467
Msa0475690 AT2G23000.1 53.378 444 164 5 53 483 24 437 3.53e-161 464
Msa0475690 AT2G23000.2 53.378 444 164 5 53 483 24 437 3.53e-161 464
Msa0475690 AT5G36180.1 53.587 446 160 4 51 483 30 441 4.61e-161 463
Msa0475690 AT2G22920.2 51.902 447 166 5 52 483 23 435 1.20e-160 462
Msa0475690 AT1G73280.1 51.002 449 173 4 48 483 27 441 4.73e-159 458
Msa0475690 AT2G22990.1 51.893 449 171 7 48 483 17 433 2.98e-158 456
Msa0475690 AT2G22970.1 51.562 448 164 7 52 483 23 433 9.15e-158 455
Msa0475690 AT1G73290.1 51.570 446 167 5 51 483 29 438 3.44e-157 453
Msa0475690 AT3G12240.1 50.897 446 172 4 51 483 25 436 3.96e-157 453
Msa0475690 AT2G23010.1 49.894 471 189 6 26 483 1 437 6.26e-157 453
Msa0475690 AT2G22980.1 51.345 446 164 6 52 483 24 430 6.24e-156 450
Msa0475690 AT3G12230.1 50.673 446 173 4 51 483 24 435 8.53e-156 450
Msa0475690 AT2G23010.2 49.469 471 191 6 26 483 1 437 2.68e-155 449
Msa0475690 AT1G73310.1 50.897 446 172 4 51 483 30 441 8.65e-155 447
Msa0475690 AT1G73270.2 51.794 446 168 4 51 483 30 441 2.77e-154 446
Msa0475690 AT1G73270.1 51.794 446 168 4 51 483 30 441 4.25e-154 446
Msa0475690 AT3G12203.3 49.887 443 174 4 54 483 9 416 1.23e-153 444
Msa0475690 AT3G12203.1 49.007 453 183 4 44 483 20 437 1.46e-153 444
Msa0475690 AT3G10450.4 51.537 423 159 3 48 457 23 412 1.01e-151 439
Msa0475690 AT3G10450.2 51.765 425 158 4 72 483 4 394 1.05e-151 438
Msa0475690 AT2G22990.5 50.111 449 170 8 48 483 17 424 9.97e-149 431
Msa0475690 AT2G22970.3 51.179 424 155 6 52 459 23 410 1.83e-148 431
Msa0475690 AT2G22970.4 51.185 422 154 6 52 457 23 408 2.08e-148 430
Msa0475690 AT3G12220.1 50.000 442 174 4 51 479 24 431 6.71e-148 430
Msa0475690 AT2G22990.4 51.064 423 163 6 48 457 17 408 2.80e-146 425
Msa0475690 AT2G22990.3 51.179 424 163 6 51 461 20 412 3.12e-146 426
Msa0475690 AT2G22980.2 50.476 420 156 5 52 457 24 405 8.04e-145 421
Msa0475690 AT2G22980.4 50.476 420 156 5 52 457 24 405 2.20e-144 421
Msa0475690 AT2G22920.1 49.512 410 159 4 48 442 19 395 1.32e-139 407
Msa0475690 AT3G10450.3 50.376 399 152 3 72 457 4 369 7.66e-139 404
Msa0475690 AT1G73310.2 49.878 409 159 3 51 446 30 405 2.18e-138 405
Msa0475690 AT1G73290.3 50.123 405 154 4 51 442 29 398 2.35e-137 402
Msa0475690 AT3G12203.2 48.780 410 166 3 87 483 1 379 3.06e-137 400
Msa0475690 AT3G12220.2 48.456 421 170 4 72 479 15 401 1.85e-134 394
Msa0475690 AT5G36180.5 50.136 369 141 3 128 483 1 339 3.28e-120 355
Msa0475690 AT5G36180.3 50.136 369 141 3 128 483 1 339 3.28e-120 355
Msa0475690 AT1G73280.4 47.696 369 150 3 128 483 1 339 8.42e-118 349
Msa0475690 AT1G73280.2 49.296 355 147 2 48 402 27 348 1.07e-117 350
Msa0475690 AT2G22980.3 48.305 354 142 5 52 402 24 339 1.05e-110 332
Msa0475690 AT2G22920.4 50.152 329 131 2 48 376 19 314 1.16e-110 330
Msa0475690 AT2G22990.6 48.991 347 136 5 150 483 1 319 4.18e-110 329
Msa0475690 AT4G12910.1 35.490 510 266 9 13 478 2 492 5.79e-110 335
Msa0475690 AT5G36180.2 48.980 343 133 2 128 457 1 314 1.51e-109 328
Msa0475690 AT2G22990.2 48.415 347 138 5 150 483 1 319 1.12e-108 325
Msa0475690 AT1G73280.3 47.674 344 137 3 153 483 1 314 2.40e-108 324
Msa0475690 AT2G22970.2 50.153 327 125 4 52 376 23 313 3.65e-108 324
Msa0475690 AT1G73290.2 55.351 271 115 2 51 321 29 293 1.07e-100 305
Msa0475690 AT5G36180.4 45.706 361 152 3 128 473 1 332 2.54e-99 302
Msa0475690 AT3G25420.1 35.556 495 269 11 27 479 4 490 2.76e-99 307
Msa0475690 AT1G73310.3 45.619 331 138 2 129 446 2 303 5.89e-97 296
Msa0475690 AT2G22980.5 46.584 322 124 4 150 457 1 288 5.07e-95 290
Msa0475690 AT4G12910.2 34.038 473 249 9 13 441 2 455 6.64e-93 290
Msa0475690 AT2G22920.3 48.239 284 102 4 215 483 3 256 5.94e-87 267
Msa0475690 AT3G12220.3 56.223 233 98 1 51 283 24 252 1.73e-82 260
Msa0475690 AT3G12220.3 51.471 136 52 2 357 479 245 379 2.11e-38 144
Msa0475690 AT3G52020.1 30.388 464 275 11 38 483 64 497 6.52e-58 199
Msa0475690 AT5G23210.1 31.770 469 273 14 45 483 43 494 1.81e-57 198
Msa0475690 AT4G30810.1 30.947 475 281 15 29 483 14 461 3.73e-54 189
Msa0475690 AT4G15100.1 29.600 500 305 17 9 483 3 480 1.91e-53 187
Msa0475690 AT1G61130.1 31.224 474 263 16 42 482 15 458 4.51e-53 186
Msa0475690 AT2G05850.1 30.472 466 260 19 45 483 55 483 7.25e-52 183
Msa0475690 AT3G52000.1 29.211 469 276 14 34 483 47 478 2.08e-51 182
Msa0475690 AT1G11080.1 30.178 507 304 18 6 482 1 487 7.55e-51 180
Msa0475690 AT1G11080.2 30.178 507 304 18 6 482 1 487 7.84e-51 180
Msa0475690 AT3G52010.1 28.139 462 275 14 45 483 56 483 3.24e-50 179
Msa0475690 AT4G30610.1 29.184 490 293 17 19 483 1 461 8.50e-50 177
Msa0475690 AT3G17180.1 30.159 441 260 15 70 483 55 474 1.42e-49 177
Msa0475690 AT2G22960.1 58.273 139 44 2 358 483 47 184 4.49e-49 167
Msa0475690 AT5G08260.1 28.131 487 309 15 22 483 5 475 1.83e-48 174
Msa0475690 AT5G23210.3 31.294 425 246 13 45 439 43 451 2.72e-47 170
Msa0475690 AT2G35770.1 28.745 494 288 16 17 483 1 457 3.20e-46 167
Msa0475690 AT1G28110.1 28.355 462 271 16 50 483 28 457 1.53e-45 165
Msa0475690 AT1G28110.2 28.355 462 271 16 50 483 28 457 1.53e-45 165
Msa0475690 AT2G12480.3 28.541 466 278 14 44 483 20 456 1.74e-45 165
Msa0475690 AT2G33530.1 27.021 470 271 14 49 483 29 461 9.51e-45 163
Msa0475690 AT1G43780.1 28.067 481 296 15 24 478 8 464 1.93e-44 162
Msa0475690 AT3G07990.1 29.111 450 266 16 57 483 37 456 3.01e-44 162
Msa0475690 AT2G24010.1 29.194 459 265 16 50 483 27 450 4.90e-44 161
Msa0475690 AT2G24000.1 29.047 451 278 14 50 479 27 456 9.20e-44 160
Msa0475690 AT2G35780.1 28.726 463 263 16 50 483 26 450 3.14e-42 156
Msa0475690 AT2G12480.1 27.176 471 286 15 25 483 5 430 3.37e-42 155
Msa0475690 AT5G42240.1 27.826 460 281 13 50 483 29 463 4.85e-42 156
Msa0475690 AT2G12480.4 27.876 452 275 14 44 483 20 432 6.55e-42 155
Msa0475690 AT5G23210.5 29.950 404 241 12 110 483 8 399 1.07e-41 154
Msa0475690 AT3G63470.1 27.373 453 276 16 50 483 78 496 3.03e-41 154
Msa0475690 AT5G23210.2 29.777 403 241 12 111 483 8 398 9.14e-41 151
Msa0475690 AT3G02110.1 28.322 459 284 17 49 483 33 470 9.66e-41 152
Msa0475690 AT2G12480.2 28.035 453 272 15 44 483 20 431 1.78e-40 151
Msa0475690 AT2G24010.2 28.059 474 266 17 50 483 27 465 2.49e-39 148
Msa0475690 AT3G17180.2 29.250 400 235 15 70 442 55 433 9.58e-39 146
Msa0475690 AT5G42230.1 28.788 462 276 17 45 478 18 454 1.01e-38 147
Msa0475690 AT5G42230.2 28.788 462 276 17 45 478 18 454 1.01e-38 147
Msa0475690 AT2G24010.3 27.711 498 256 20 53 483 1 461 6.76e-35 136
Msa0475690 AT5G22980.1 24.769 432 276 10 65 478 91 491 9.21e-33 130
Msa0475690 AT3G45010.1 25.059 427 251 11 81 478 110 496 1.19e-32 130
Msa0475690 AT5G23210.4 28.969 359 214 11 111 439 8 355 6.86e-31 123
Msa0475690 AT3G10410.1 33.854 192 120 2 84 275 111 295 7.45e-29 119
Msa0475690 AT3G56540.1 36.313 179 103 4 35 212 61 229 7.02e-27 109
Msa0475690 AT2G24010.4 30.961 281 163 9 53 315 1 268 2.88e-25 107
Msa0475690 AT5G22960.1 30.519 154 82 3 84 237 46 174 3.02e-19 85.9
Msa0475690 AT1G15000.1 24.088 411 260 14 84 478 47 421 4.02e-19 90.1
Msa0475690 AT2G24000.2 24.739 287 187 8 211 479 118 393 1.47e-14 75.9

Find 130 sgRNAs with CRISPR-Local

Find 842 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTAGACAAAATACATTT+TGG 0.095730 3_3:-79073629 None:intergenic
GAAATTTCTTGAACGATAAT+TGG 0.114312 3_3:-79068718 None:intergenic
ACTTTATTTGAGATAAATTT+TGG 0.120924 3_3:-79068658 None:intergenic
TTGTGTCCTCAGACTATTTC+AGG 0.178448 3_3:+79075980 Msa0475690:intron
ACTTAATCAAGCTCATATTT+TGG 0.202404 3_3:+79076003 Msa0475690:CDS
CTGAGCAGCACTTTCCGTTT+TGG 0.203892 3_3:-79068461 None:intergenic
TCTGGCCTTGCCTTTGAAAT+AGG 0.222999 3_3:+79065791 Msa0475690:CDS
CATATTTCCTCTGTTCCTAT+TGG 0.224400 3_3:+79078001 Msa0475690:CDS
TGTGGCCTCAAGATCAAATT+TGG 0.274400 3_3:-79066190 None:intergenic
AGGAAGATACTTGACAATAT+TGG 0.289696 3_3:-79065594 None:intergenic
ACAATTCTCATCAATTTCTT+AGG 0.293418 3_3:+79068506 Msa0475690:CDS
CTTCCCTTTATACTGGAAAC+TGG 0.294221 3_3:+79065632 Msa0475690:CDS
AGTCCCATGCCATGATTAAA+TGG 0.298420 3_3:-79073413 None:intergenic
TTCAGGGAACTACAGGAAAA+TGG 0.320072 3_3:+79078181 Msa0475690:intron
AGGACCCCTTCCCTTTATAC+TGG 0.322457 3_3:+79065625 Msa0475690:CDS
GAAGTTACCCGGCAGTTTAA+AGG 0.333114 3_3:-79076133 None:intergenic
GGCAAGAGAGGATCTTCTTT+AGG 0.335713 3_3:-79065734 None:intergenic
GAAAACAAGAAACTCTAAAA+TGG 0.340331 3_3:+79065424 Msa0475690:exon
ATATTTCCTCTGTTCCTATT+GGG 0.340654 3_3:+79078002 Msa0475690:CDS
CCTCTCTTGCCTTGGTTAAC+CGG 0.344121 3_3:+79065746 Msa0475690:CDS
AATATTGTCAAGTATCTTCC+TGG 0.348835 3_3:+79065596 Msa0475690:CDS
CTCCTATCATTGGGTTCCAT+TGG 0.355097 3_3:-79076055 None:intergenic
GTACCCAGTTTCCAGTATAA+AGG 0.358888 3_3:-79065636 None:intergenic
GGAAACTGGGTACGTGGGAG+TGG 0.362327 3_3:+79065646 Msa0475690:CDS
CCTGGTTGCTCTGCTTTCTC+TGG 0.363794 3_3:+79065773 Msa0475690:CDS
TCATTGGGTTCCATTGGATT+AGG 0.365904 3_3:-79076049 None:intergenic
TAATATAGGAGCAAGTTCTT+TGG 0.366469 3_3:+79079146 Msa0475690:three_prime_UTR
TCATAATTAATAAATAATAT+AGG 0.382759 3_3:+79079132 Msa0475690:three_prime_UTR
TCAAATAAAGTGTACATTGC+TGG 0.383366 3_3:+79068670 Msa0475690:CDS
TGATCTTGAGGCCACATTCA+TGG 0.386096 3_3:+79066197 Msa0475690:CDS
ATTAGCGTCGTTGGCCCAAT+AGG 0.389162 3_3:-79078016 None:intergenic
GTTGTTTAATTGTCAAAGCC+TGG 0.389238 3_3:-79079218 None:intergenic
TTGGAACCGAGTTGCGAGTT+TGG 0.389919 3_3:+79076022 Msa0475690:CDS
TTGGATTTGCCTGTGGGTAC+TGG 0.395039 3_3:+79068427 Msa0475690:CDS
AAGAAGTCTCCTCCTATCAT+TGG 0.397961 3_3:-79076065 None:intergenic
TCAACCATGGATAAACCTTC+AGG 0.404108 3_3:+79069075 Msa0475690:CDS
AAATTTCTTGAACGATAATT+GGG 0.406294 3_3:-79068717 None:intergenic
TTTACAATCTATTCTTCAAA+AGG 0.412675 3_3:-79065313 None:intergenic
ATCGTTCAAGAAATTTCATA+TGG 0.418324 3_3:+79068724 Msa0475690:CDS
TAAACAACTAGTAGAACTAT+TGG 0.430964 3_3:+79079233 Msa0475690:three_prime_UTR
CCTTGGTTAACCGGTGGTCC+TGG 0.437882 3_3:+79065755 Msa0475690:CDS
TACCCAGTTTCCAGTATAAA+GGG 0.445931 3_3:-79065635 None:intergenic
TTTGCAATTCAGGGAACTAC+AGG 0.448841 3_3:+79078174 Msa0475690:intron
ACTATTCCATTGTTGACGAT+TGG 0.450638 3_3:+79078708 Msa0475690:CDS
TTTATTCAGGGATACATACT+AGG 0.451403 3_3:+79073347 Msa0475690:intron
ATTGCTGGTGACTCGTACTC+AGG 0.452372 3_3:+79068685 Msa0475690:CDS
TTGTGAGCTAGCGATGTTAA+GGG 0.457657 3_3:-79073374 None:intergenic
GTTGTGAGCTAGCGATGTTA+AGG 0.460650 3_3:-79073375 None:intergenic
ATCCAATGGAACCCAATGAT+AGG 0.473650 3_3:+79076053 Msa0475690:CDS
CTATCTATTTCGTGCTTGAA+AGG 0.473682 3_3:-79078225 None:intergenic
ACGAAGGTGGCCTTCAACCA+TGG 0.480233 3_3:+79069062 Msa0475690:CDS
TCAAAATTAATAATAGTACT+AGG 0.480678 3_3:+79065361 Msa0475690:five_prime_UTR
GCATTCTTCACGTTTGTACT+CGG 0.481386 3_3:-79079017 None:intergenic
TATTCTAATTCTCAAGTAGC+AGG 0.482956 3_3:+79078740 Msa0475690:CDS
TTCTCATCAATTTCTTAGGA+AGG 0.484639 3_3:+79068510 Msa0475690:CDS
CACACATTATATTAACTCAC+TGG 0.485158 3_3:-79079172 None:intergenic
TACAAGATACCATTTAATCA+TGG 0.487451 3_3:+79073404 Msa0475690:CDS
CATTGCCACCTTTAAACTGC+CGG 0.494522 3_3:+79076125 Msa0475690:CDS
ACACAAGGACTTACTCGAAT+CGG 0.495879 3_3:+79078855 Msa0475690:CDS
CATTCTTCACGTTTGTACTC+GGG 0.496306 3_3:-79079016 None:intergenic
AGAAGTCTCCTCCTATCATT+GGG 0.497759 3_3:-79076064 None:intergenic
TGGATTCTCTTATCCCAAAA+CGG 0.503544 3_3:+79068447 Msa0475690:CDS
AAGAAGATCCTCTCTTGCCT+TGG 0.504213 3_3:+79065738 Msa0475690:CDS
GCTATTATTACCTATTTCAA+AGG 0.508985 3_3:-79065801 None:intergenic
ATTCCATTGTTGACGATTGG+AGG 0.519599 3_3:+79078711 Msa0475690:CDS
GTGCTGCTCAGCAAAGCACT+TGG 0.520133 3_3:+79068473 Msa0475690:CDS
GTTTGGTTCGCCTAATCCAA+TGG 0.522175 3_3:+79076039 Msa0475690:CDS
TTCTCACTATATAACATCCC+AGG 0.527410 3_3:+79079200 Msa0475690:three_prime_UTR
ACTCTAAAATGGCAATGCTT+AGG 0.528452 3_3:+79065435 Msa0475690:exon
ACTCAAACACAAGACAAAGA+AGG 0.530772 3_3:-79079315 None:intergenic
TCATCATGTTGAACTCAGCT+TGG 0.541098 3_3:-79079097 None:intergenic
TTGTTTAATTGTCAAAGCCT+GGG 0.542222 3_3:-79079217 None:intergenic
GCTTACCAAATTTGATCTTG+AGG 0.543670 3_3:+79066185 Msa0475690:CDS
CTCAAACACAAGACAAAGAA+GGG 0.544273 3_3:-79079314 None:intergenic
TCTTGAACGATAATTGGGAC+AGG 0.546018 3_3:-79068712 None:intergenic
GGCTCACCTCTCGATAGGAC+TGG 0.549193 3_3:-79073656 None:intergenic
CCAGAGAAAGCAGAGCAACC+AGG 0.549843 3_3:-79065773 None:intergenic
TATTACCTATTTCAAAGGCA+AGG 0.550886 3_3:-79065796 None:intergenic
GCATTAATTAATTCCTAGAG+TGG 0.553204 3_3:-79079073 None:intergenic
GGCGAACCAAACTCGCAACT+CGG 0.556197 3_3:-79076028 None:intergenic
GATATCTAATTACCCACTCT+AGG 0.558407 3_3:+79079060 Msa0475690:CDS
GAAGGTTTATCCATGGTTGA+AGG 0.558919 3_3:-79069072 None:intergenic
TCCTTTCTTGCAGGAAACGA+AGG 0.559496 3_3:+79069046 Msa0475690:intron
GATACCATTTAATCATGGCA+TGG 0.559956 3_3:+79073409 Msa0475690:CDS
TATATATAATTACAGGGAGG+AGG 0.561008 3_3:+79078983 Msa0475690:intron
TTCCCTTTATACTGGAAACT+GGG 0.561201 3_3:+79065633 Msa0475690:CDS
AGCAGAGCAACCAGGACCAC+CGG 0.561403 3_3:-79065765 None:intergenic
AGTTTCCAGTATAAAGGGAA+GGG 0.562311 3_3:-79065630 None:intergenic
ATTGCCACCTTTAAACTGCC+GGG 0.562723 3_3:+79076126 Msa0475690:CDS
GGAAGGGGTCCTTGAAAACC+AGG 0.563915 3_3:-79065614 None:intergenic
CGAACCTGAAGGTTTATCCA+TGG 0.570056 3_3:-79069079 None:intergenic
TTGTTGACGATTGGAGGCAG+TGG 0.579562 3_3:+79078717 Msa0475690:CDS
TCAACCTTTGTCCATGAATG+TGG 0.581164 3_3:-79066208 None:intergenic
CAGTTTCCAGTATAAAGGGA+AGG 0.584821 3_3:-79065631 None:intergenic
CTCTTGCCTTGGTTAACCGG+TGG 0.585517 3_3:+79065749 Msa0475690:CDS
TATTATAATCATCTTAAACA+AGG 0.586583 3_3:-79065507 None:intergenic
ATACCATTTAATCATGGCAT+GGG 0.586946 3_3:+79073410 Msa0475690:CDS
TTTCTTGCAGGAAACGAAGG+TGG 0.589584 3_3:+79069049 Msa0475690:intron
TATACTGGAAACTGGGTACG+TGG 0.590195 3_3:+79065640 Msa0475690:CDS
CCGGTTAACCAAGGCAAGAG+AGG 0.590546 3_3:-79065746 None:intergenic
AAATGCACTGCACATTCGAA+AGG 0.594941 3_3:+79078044 Msa0475690:CDS
ACAACTAGTAGAACTATTGG+TGG 0.598054 3_3:+79079236 Msa0475690:three_prime_UTR
GAAACTGGGTACGTGGGAGT+GGG 0.598863 3_3:+79065647 Msa0475690:CDS
AATGCTTAGCCATGTTCAGT+AGG 0.600787 3_3:+79079035 Msa0475690:CDS
GTTTCCAGTATAAAGGGAAG+GGG 0.605701 3_3:-79065629 None:intergenic
GATGACATTTGCAACTGTGA+AGG 0.605807 3_3:+79078877 Msa0475690:CDS
GCTTAGCCATGTTCAGTAGG+TGG 0.616283 3_3:+79079038 Msa0475690:CDS
AGATATCCACCTACTGAACA+TGG 0.617483 3_3:-79079044 None:intergenic
ATAAGAACAGGGAAGAGAAG+TGG 0.620377 3_3:+79065391 Msa0475690:five_prime_UTR
CAATGGAACCCAATGATAGG+AGG 0.620627 3_3:+79076056 Msa0475690:CDS
CATTAATTAATTCCTAGAGT+GGG 0.623797 3_3:-79079072 None:intergenic
GAACGATAATTGGGACAGGA+AGG 0.626511 3_3:-79068708 None:intergenic
GTTACCCGGCAGTTTAAAGG+TGG 0.631340 3_3:-79076130 None:intergenic
GAGGCCACATTCATGGACAA+AGG 0.632336 3_3:+79066204 Msa0475690:CDS
TAAGAGAATCCAGTACCCAC+AGG 0.632578 3_3:-79068436 None:intergenic
ATTCTAATTCTCAAGTAGCA+GGG 0.636518 3_3:+79078741 Msa0475690:CDS
TGAAACAGATGAAAATGCCA+CGG 0.638651 3_3:+79065676 Msa0475690:CDS
CTGCCTCCAATCGTCAACAA+TGG 0.640625 3_3:-79078714 None:intergenic
ACACATTATATTAACTCACT+GGG 0.648883 3_3:-79079171 None:intergenic
GAGGAGACTTCTTATTCACA+AGG 0.651385 3_3:+79076075 Msa0475690:CDS
CGTTGGCCCAATAGGAACAG+AGG 0.657328 3_3:-79078008 None:intergenic
AACAGGGAAGAGAAGTGGTG+TGG 0.668685 3_3:+79065396 Msa0475690:five_prime_UTR
TCACTGCAAAAGAATTGTCG+AGG 0.675005 3_3:+79073585 Msa0475690:CDS
CCAGGACCACCGGTTAACCA+AGG 0.679559 3_3:-79065755 None:intergenic
AAAATAGTAGAACAATTCCG+TGG 0.680286 3_3:-79065693 None:intergenic
AGATATCCAGTCCTATCGAG+AGG 0.681028 3_3:+79073650 Msa0475690:CDS
ATACTGGAAACTGGGTACGT+GGG 0.691513 3_3:+79065641 Msa0475690:CDS
ATATTATTGATAGATACACA+AGG 0.717109 3_3:+79078840 Msa0475690:intron
TATTTCTGATGAACTCTACG+AGG 0.729720 3_3:+79073436 Msa0475690:CDS
AGGCTTAGTTCACATCACAG+TGG 0.770405 3_3:+79065455 Msa0475690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTTAAAATAAAAAT+AGG + chr3_3:79070925-79070944 Msa0475690:intron 0.0%
!!! AATTAGTTTAATATTATTCA+AGG + chr3_3:79065851-79065870 Msa0475690:intron 10.0%
!! AAAGAGTTAATAAATATAAA+TGG + chr3_3:79066589-79066608 Msa0475690:intron 10.0%
!! AAAGAATTAAAAAGAAAATT+AGG - chr3_3:79067212-79067231 None:intergenic 10.0%
!! CTTAATTATTAAATTTATGA+TGG + chr3_3:79068382-79068401 Msa0475690:intron 10.0%
!!! TTTAAATTTTGAATTAACTT+TGG - chr3_3:79069205-79069224 None:intergenic 10.0%
!! TATTTGACAAAATATTATAT+TGG + chr3_3:79070123-79070142 Msa0475690:intron 10.0%
!!! ACAAAATTAAATCTTTAAAA+TGG + chr3_3:79070219-79070238 Msa0475690:intron 10.0%
!! AATTTACTTAATTTATTATC+GGG + chr3_3:79071041-79071060 Msa0475690:intron 10.0%
!! TGGAAAATATTTAAAAAAAT+TGG + chr3_3:79072169-79072188 Msa0475690:intron 10.0%
!! AAAAAGGTAATAAAATTAAA+TGG + chr3_3:79072442-79072461 Msa0475690:intron 10.0%
!! AATAATTAAAAAAATTGGTT+AGG + chr3_3:79072902-79072921 Msa0475690:intron 10.0%
!! ATAATTAAAAAAATTGGTTA+GGG + chr3_3:79072903-79072922 Msa0475690:intron 10.0%
!!! TTGAAACTTTTAAAATTTAA+AGG + chr3_3:79074382-79074401 Msa0475690:intron 10.0%
!! TTAAAATGTTATTATAAAGT+TGG + chr3_3:79075022-79075041 Msa0475690:intron 10.0%
!! ATTTATTATTAGAGTTTAAT+TGG + chr3_3:79076165-79076184 Msa0475690:intron 10.0%
!!! AAAGTTTTTTCTTAAAAAAA+TGG - chr3_3:79076642-79076661 None:intergenic 10.0%
!! AAATAAATATTACTGTATAA+AGG + chr3_3:79077314-79077333 Msa0475690:intron 10.0%
!!! TTATTTTATACAAACAATAA+AGG + chr3_3:79078081-79078100 Msa0475690:intron 10.0%
!! GTTATATATATATAATTACA+GGG + chr3_3:79078977-79078996 Msa0475690:intron 10.0%
!! TCAAAATTAATAATAGTACT+AGG + chr3_3:79065361-79065380 Msa0475690:five_prime_UTR 15.0%
!! TATTATAATCATCTTAAACA+AGG - chr3_3:79065510-79065529 None:intergenic 15.0%
!!! TTTGTTATATTTGCTATTTT+AGG + chr3_3:79065905-79065924 Msa0475690:intron 15.0%
!!! TTTTTTTTGTTTGATAAACA+AGG + chr3_3:79066273-79066292 Msa0475690:intron 15.0%
!! GGTTAAAAAAAGAAATAAAA+AGG - chr3_3:79066774-79066793 None:intergenic 15.0%
!! GGTTAAAAAAAGAATTAAAA+AGG - chr3_3:79066840-79066859 None:intergenic 15.0%
!! GATTTATGAAAGAATTAAAA+AGG - chr3_3:79066900-79066919 None:intergenic 15.0%
!!! AAAATTAGTTTACTAAGTTA+GGG - chr3_3:79066973-79066992 None:intergenic 15.0%
!! GGTTAAAAAAAGAATTAAAA+AGG - chr3_3:79066840-79066859 None:intergenic 15.0%
!! GATTTATGAAAGAATTAAAA+AGG - chr3_3:79066900-79066919 None:intergenic 15.0%
!! ATCAAATCCATAAAAAATTA+TGG - chr3_3:79067170-79067189 None:intergenic 15.0%
!! TAGGATTATTAAAGAAAATT+AGG - chr3_3:79067193-79067212 None:intergenic 15.0%
!!! AATTTGTTTTGTTTATAAGT+GGG - chr3_3:79067553-79067572 None:intergenic 15.0%
!!! TATTTTATTAATCGGAAAAA+TGG - chr3_3:79068172-79068191 None:intergenic 15.0%
!!! ACTTTATTTGAGATAAATTT+TGG - chr3_3:79068661-79068680 None:intergenic 15.0%
!!! TTACCCTTTTTTTTAATATA+TGG + chr3_3:79068858-79068877 Msa0475690:intron 15.0%
!! AGTCCATATATTAAAAAAAA+GGG - chr3_3:79068864-79068883 None:intergenic 15.0%
!! TAGTCCATATATTAAAAAAA+AGG - chr3_3:79068865-79068884 None:intergenic 15.0%
!!! TTTAAAATGTATCTATGTAT+TGG + chr3_3:79070040-79070059 Msa0475690:intron 15.0%
!! AACACAAAATGATATAAATT+AGG - chr3_3:79070504-79070523 None:intergenic 15.0%
!! ATAAAAATAGGTTATTATTG+AGG + chr3_3:79070937-79070956 Msa0475690:intron 15.0%
!!! CTTTTAAAAACTTGTTTTAA+AGG + chr3_3:79071507-79071526 Msa0475690:intron 15.0%
!!! ATTTTGTGTCATATAAATAT+TGG - chr3_3:79071828-79071847 None:intergenic 15.0%
!!! AGAGATTTTTCATTTTTTAA+CGG - chr3_3:79071914-79071933 None:intergenic 15.0%
!! AATATTTAAAAAAATTGGTG+AGG + chr3_3:79072174-79072193 Msa0475690:intron 15.0%
!!! AATAAAATTCCTTTGAAAAA+AGG + chr3_3:79072426-79072445 Msa0475690:intron 15.0%
!!! ATTTTATTACCTTTTTTCAA+AGG - chr3_3:79072438-79072457 None:intergenic 15.0%
!! AAAAATAAAGAAAAAGTTTC+CGG + chr3_3:79072547-79072566 Msa0475690:intron 15.0%
!! TACTTAATTGATATTGTATT+CGG + chr3_3:79072702-79072721 Msa0475690:intron 15.0%
!! TAATTAAAAAAATTGGTTAG+GGG + chr3_3:79072904-79072923 Msa0475690:intron 15.0%
!! TCTACTTATATATATAAGAA+AGG - chr3_3:79073037-79073056 None:intergenic 15.0%
!! TAGAACAATAACATTAAATA+TGG - chr3_3:79073093-79073112 None:intergenic 15.0%
!!! AAAAAAAAACCTTTTTATTC+AGG + chr3_3:79073334-79073353 Msa0475690:intron 15.0%
!!! AAAAAAAACCTTTTTATTCA+GGG + chr3_3:79073335-79073354 Msa0475690:intron 15.0%
!!! TAACAAAGAGATTATTTTTA+TGG + chr3_3:79074814-79074833 Msa0475690:intron 15.0%
!!! GTAATTTTGATATCTTATTT+TGG + chr3_3:79075052-79075071 Msa0475690:intron 15.0%
!! TTAAAGTCTTAAAAAAAATG+AGG + chr3_3:79075250-79075269 Msa0475690:intron 15.0%
!!! TATTTTAAATTGCACAATTT+TGG - chr3_3:79075384-79075403 None:intergenic 15.0%
!!! AAAATTGTGCAATTTAAAAT+AGG + chr3_3:79075383-79075402 Msa0475690:intron 15.0%
!! TCAATTAAATCCATAAAAAT+TGG + chr3_3:79076207-79076226 Msa0475690:intron 15.0%
!! CAATTAAATCCATAAAAATT+GGG + chr3_3:79076208-79076227 Msa0475690:intron 15.0%
!!! TTTTTACTTACATTTTGAAA+CGG - chr3_3:79076544-79076563 None:intergenic 15.0%
!!! GTTCTAAAAACAATTTTAAT+TGG - chr3_3:79076738-79076757 None:intergenic 15.0%
!!! CTCTATATTTTAAATTTTCT+TGG - chr3_3:79077272-79077291 None:intergenic 15.0%
!! ATTAGTGTATTATCTTTATA+TGG - chr3_3:79077493-79077512 None:intergenic 15.0%
!! ATAAAGATAATACACTAATT+TGG + chr3_3:79077494-79077513 Msa0475690:intron 15.0%
!! TAAAGATAATACACTAATTT+GGG + chr3_3:79077495-79077514 Msa0475690:intron 15.0%
!!! TTTTCATTCAAATATAGTAT+AGG + chr3_3:79077857-79077876 Msa0475690:intron 15.0%
!! AGAAAAAAAAACAGTTAAAT+CGG - chr3_3:79077958-79077977 None:intergenic 15.0%
!! CGTTATATATATATAATTAC+AGG + chr3_3:79078976-79078995 Msa0475690:intron 15.0%
!! TTTACAATCTATTCTTCAAA+AGG - chr3_3:79065316-79065335 None:intergenic 20.0%
!!! GTACTATTATTAATTTTGAG+TGG - chr3_3:79065360-79065379 None:intergenic 20.0%
!! TAAAATAATGAGATGATTGA+TGG + chr3_3:79066112-79066131 Msa0475690:intron 20.0%
!! TCCAATAACATTTAAAAATG+AGG + chr3_3:79066150-79066169 Msa0475690:CDS 20.0%
!!! TCCTCATTTTTAAATGTTAT+TGG - chr3_3:79066154-79066173 None:intergenic 20.0%
!! TTTAAAAATGAGGAATACAA+CGG + chr3_3:79066160-79066179 Msa0475690:CDS 20.0%
!! TCTTTCATGTAAATTTATTG+CGG - chr3_3:79066574-79066593 None:intergenic 20.0%
!! AAACTATGTCCATAATTATA+AGG + chr3_3:79066930-79066949 Msa0475690:intron 20.0%
!! TCCATAATTATAAGGATATA+TGG + chr3_3:79066938-79066957 Msa0475690:intron 20.0%
!! TCCATATATCCTTATAATTA+TGG - chr3_3:79066942-79066961 None:intergenic 20.0%
!!! CAAAATTAGTTTACTAAGTT+AGG - chr3_3:79066974-79066993 None:intergenic 20.0%
!! TAAACTATGTCCATAATTAT+AGG + chr3_3:79066929-79066948 Msa0475690:intron 20.0%
!! AAACTATGTCCATAATTATA+GGG + chr3_3:79066930-79066949 Msa0475690:intron 20.0%
!!! ACTATGTCCATAATTTTTTA+TGG + chr3_3:79067160-79067179 Msa0475690:intron 20.0%
!! TTAATATGTTAAGGAGAATT+TGG - chr3_3:79067356-79067375 None:intergenic 20.0%
!!! ATTTGTTTTGTTTATAAGTG+GGG - chr3_3:79067552-79067571 None:intergenic 20.0%
!!! CAATTTGTTTTGTTTATAAG+TGG - chr3_3:79067554-79067573 None:intergenic 20.0%
!! TATAAACAAAACAAATTGTC+AGG + chr3_3:79067556-79067575 Msa0475690:intron 20.0%
!!! TTATTAAATTTATGATGGAC+AGG + chr3_3:79068387-79068406 Msa0475690:intron 20.0%
!!! GGTAAGTAATATCATATTTT+TGG + chr3_3:79068408-79068427 Msa0475690:intron 20.0%
!! TTGTCTTTAAATGTATATAG+TGG + chr3_3:79068623-79068642 Msa0475690:intron 20.0%
!! AAATTTCTTGAACGATAATT+GGG - chr3_3:79068720-79068739 None:intergenic 20.0%
!!! ATTTTCCTTATTTTTTATCC+TGG - chr3_3:79069150-79069169 None:intergenic 20.0%
!!! TGATTGACTTAATTACATTT+TGG + chr3_3:79069269-79069288 Msa0475690:intron 20.0%
!!! TTTATTCCTTGTTTATTTCA+TGG - chr3_3:79069603-79069622 None:intergenic 20.0%
!!! TTCTAAGATATGTTTCAAAT+TGG + chr3_3:79069529-79069548 Msa0475690:intron 20.0%
!!! TCTAAGATATGTTTCAAATT+GGG + chr3_3:79069530-79069549 Msa0475690:intron 20.0%
!!! TTTATTCCTTGTTTATTTCA+TGG + chr3_3:79069603-79069622 Msa0475690:intron 20.0%
!!! TTTAGGTTTAATTACACTTT+TGG - chr3_3:79069789-79069808 None:intergenic 20.0%
!! TGACAAAATATTATATTGGA+AGG + chr3_3:79070127-79070146 Msa0475690:intron 20.0%
!! GTACTCTAAATATTGTATTA+TGG - chr3_3:79070183-79070202 None:intergenic 20.0%
!! AGATAGATATCAATTATTAC+TGG - chr3_3:79070299-79070318 None:intergenic 20.0%
!! AAGTCAAAATGATATAAATC+AGG - chr3_3:79070354-79070373 None:intergenic 20.0%
!! AAATAAATTCAAAACTCCAT+GGG - chr3_3:79070720-79070739 None:intergenic 20.0%
!! TAAATAAATTCAAAACTCCA+TGG - chr3_3:79070721-79070740 None:intergenic 20.0%
!!! GTTTAAAAGTTGAAGTTTTT+TGG - chr3_3:79070777-79070796 None:intergenic 20.0%
!!! ATGATTTATGAAATTTTGAG+TGG - chr3_3:79070813-79070832 None:intergenic 20.0%
!! CATATCTTATTACTTAAAGT+TGG - chr3_3:79071001-79071020 None:intergenic 20.0%
!! ATTCTCAAATTTACTAAGAA+TGG - chr3_3:79071559-79071578 None:intergenic 20.0%
!!! TAATTTGTTCATTTTTCCTT+CGG - chr3_3:79071661-79071680 None:intergenic 20.0%
!!! ACTATTTAAAACTAAGTTGA+TGG - chr3_3:79072098-79072117 None:intergenic 20.0%
!!! ATAATTTTTTTAGTGTTGCT+TGG - chr3_3:79072210-79072229 None:intergenic 20.0%
!! AGAAAGGAGATAAAAATATT+TGG + chr3_3:79072314-79072333 Msa0475690:intron 20.0%
!! GAAAGGAGATAAAAATATTT+GGG + chr3_3:79072315-79072334 Msa0475690:intron 20.0%
!! TCCTTAAAAAATTAATGCAA+CGG + chr3_3:79072469-79072488 Msa0475690:intron 20.0%
!!! TGGAGGTTTTTTTTTTTTTA+AGG - chr3_3:79072955-79072974 None:intergenic 20.0%
!!! CATTTTGGTAATTCAATTAT+TGG - chr3_3:79072975-79072994 None:intergenic 20.0%
!!! TCATCATGTTTGTTATTAAA+GGG - chr3_3:79073165-79073184 None:intergenic 20.0%
!!! TTCATCATGTTTGTTATTAA+AGG - chr3_3:79073166-79073185 None:intergenic 20.0%
!!! ACTTTTTACTTATATTTCAG+AGG + chr3_3:79073239-79073258 Msa0475690:intron 20.0%
!!! TTCTAGACAAAATACATTTT+GGG - chr3_3:79073631-79073650 None:intergenic 20.0%
!!! TACTTTTGACAATATTTCAA+AGG + chr3_3:79073873-79073892 Msa0475690:intron 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG - chr3_3:79073948-79073967 None:intergenic 20.0%
!! TTAATTATTAACTGACAGTA+GGG - chr3_3:79074008-79074027 None:intergenic 20.0%
!! ATTAATTATTAACTGACAGT+AGG - chr3_3:79074009-79074028 None:intergenic 20.0%
!! TTAGCAATATAAATATCGTT+TGG + chr3_3:79074131-79074150 Msa0475690:intron 20.0%
!! AAGTTTCAAAAGTTTCAAAT+AGG - chr3_3:79073950-79073969 None:intergenic 20.0%
!!! GACAAAGATTGTTTTAAAAT+AGG - chr3_3:79074457-79074476 None:intergenic 20.0%
!! TGTATTTGACATTATTTCAT+TGG - chr3_3:79074871-79074890 None:intergenic 20.0%
!!! ACTATGAATCTATTTGTTAT+AGG - chr3_3:79075003-79075022 None:intergenic 20.0%
!!! ACAGTCTCATATATTTTTTT+TGG + chr3_3:79075082-79075101 Msa0475690:intron 20.0%
!!! TATATTTTTTTTGGCACAAA+AGG + chr3_3:79075091-79075110 Msa0475690:intron 20.0%
!! AAATAGGATAATCAAAATGA+CGG - chr3_3:79075176-79075195 None:intergenic 20.0%
!! ATACAAACTCAAAATAAGAT+TGG + chr3_3:79075297-79075316 Msa0475690:intron 20.0%
!!! AACTAAATTTTCAGAAACAA+TGG + chr3_3:79075798-79075817 Msa0475690:intron 20.0%
!!! GTCAAATAAGATAATTTTGA+AGG - chr3_3:79075867-79075886 None:intergenic 20.0%
!! AGTTTAATTGGTAAATTCTA+AGG + chr3_3:79076177-79076196 Msa0475690:intron 20.0%
!!! TTTTACTTACATTTTGAAAC+GGG - chr3_3:79076543-79076562 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTA+TGG - chr3_3:79076778-79076797 None:intergenic 20.0%
!!! TTGAGTTTTTTCTTACAATT+TGG + chr3_3:79076839-79076858 Msa0475690:intron 20.0%
!!! TGAGTTTTTTCTTACAATTT+GGG + chr3_3:79076840-79076859 Msa0475690:intron 20.0%
!! ATTTAATTGGTGAAGATATT+CGG - chr3_3:79076924-79076943 None:intergenic 20.0%
!!! TTTTATTTGTAAAAGACATC+TGG - chr3_3:79077106-79077125 None:intergenic 20.0%
!!! TTTTAAAATGTTAACACAAG+AGG - chr3_3:79077236-79077255 None:intergenic 20.0%
!! AAAACAAAAAAACTATCAAG+TGG + chr3_3:79077384-79077403 Msa0475690:intron 20.0%
!!! TGAGATAGTTCTATTTTAAT+GGG - chr3_3:79077609-79077628 None:intergenic 20.0%
!! TCCACAAATAAGTATATTAT+AGG + chr3_3:79077903-79077922 Msa0475690:intron 20.0%
!! ACCTATAATATACTTATTTG+TGG - chr3_3:79077907-79077926 None:intergenic 20.0%
!!! TTTTTTTTCTTTTTCTTCCA+TGG + chr3_3:79077968-79077987 Msa0475690:intron 20.0%
!! AATTCACACAACTAATTATT+TGG - chr3_3:79078591-79078610 None:intergenic 20.0%
!! ATATTATTGATAGATACACA+AGG + chr3_3:79078840-79078859 Msa0475690:intron 20.0%
!! ATATATAGATATGCATAAAC+AGG - chr3_3:79078942-79078961 None:intergenic 20.0%
!! ATATATATATAATTACAGGG+AGG + chr3_3:79078980-79078999 Msa0475690:intron 20.0%
!! GAAAACAAGAAACTCTAAAA+TGG + chr3_3:79065424-79065443 Msa0475690:exon 25.0%
!! TGGATGAATTTTGTAACAAT+AGG - chr3_3:79065547-79065566 None:intergenic 25.0%
! GCTATTATTACCTATTTCAA+AGG - chr3_3:79065804-79065823 None:intergenic 25.0%
! TATTGTTTGCATTTGATCAT+AGG + chr3_3:79065964-79065983 Msa0475690:intron 25.0%
!!! CATTTGATCATAGGTTTTTT+TGG + chr3_3:79065973-79065992 Msa0475690:intron 25.0%
! TTAAAAATGAGGAATACAAC+GGG + chr3_3:79066161-79066180 Msa0475690:CDS 25.0%
! AATAGTTGAACACTTTATGT+TGG + chr3_3:79066247-79066266 Msa0475690:intron 25.0%
! GTTTATTGATGAGAGTAAAA+GGG + chr3_3:79066295-79066314 Msa0475690:intron 25.0%
! TTTATTGATGAGAGTAAAAG+GGG + chr3_3:79066296-79066315 Msa0475690:intron 25.0%
! ATTCTATTCCATCAAAAGTA+GGG - chr3_3:79066474-79066493 None:intergenic 25.0%
! TATTCTATTCCATCAAAAGT+AGG - chr3_3:79066475-79066494 None:intergenic 25.0%
! TCCATAATTATAGGGAAATA+TGG + chr3_3:79067114-79067133 Msa0475690:intron 25.0%
! TCCATATTTCCCTATAATTA+TGG - chr3_3:79067118-79067137 None:intergenic 25.0%
! AAAATTAGGGATATAGTTCT+GGG - chr3_3:79067244-79067263 None:intergenic 25.0%
! AAAAATTAGGGATATAGTTC+TGG - chr3_3:79067245-79067264 None:intergenic 25.0%
! GAAGATTAGGGAAAAAATTA+GGG - chr3_3:79067257-79067276 None:intergenic 25.0%
! AGAAGATTAGGGAAAAAATT+AGG - chr3_3:79067258-79067277 None:intergenic 25.0%
! TATTTGGACATAGTTAATTG+TGG + chr3_3:79067290-79067309 Msa0475690:intron 25.0%
! ATATTGTGTATTAGAAATCG+TGG + chr3_3:79067478-79067497 Msa0475690:intron 25.0%
!!! TTTGTTTTGTTTATAAGTGG+GGG - chr3_3:79067551-79067570 None:intergenic 25.0%
!!! TCAAATTATTTGAAAGCACT+CGG - chr3_3:79067878-79067897 None:intergenic 25.0%
!! CGGAGAGATATTTTATTAAT+CGG - chr3_3:79068180-79068199 None:intergenic 25.0%
! TTGAAAAATATGATTCGTTG+TGG - chr3_3:79068203-79068222 None:intergenic 25.0%
! TACGTAATTTATCATAGGTA+TGG - chr3_3:79068267-79068286 None:intergenic 25.0%
! ATACCTATGATAAATTACGT+AGG + chr3_3:79068266-79068285 Msa0475690:intron 25.0%
!! ATAAATTACGTAGGTTGAAT+TGG + chr3_3:79068275-79068294 Msa0475690:intron 25.0%
! ACAATTCTCATCAATTTCTT+AGG + chr3_3:79068506-79068525 Msa0475690:CDS 25.0%
! GAAATTTCTTGAACGATAAT+TGG - chr3_3:79068721-79068740 None:intergenic 25.0%
! ATCGTTCAAGAAATTTCATA+TGG + chr3_3:79068724-79068743 Msa0475690:CDS 25.0%
! ATACAGTAGAAAATAAAAGC+AGG + chr3_3:79068927-79068946 Msa0475690:intron 25.0%
! ATTGACCAGGATAAAAAATA+AGG + chr3_3:79069142-79069161 Msa0475690:intron 25.0%
! TGCAAAAACATGATAGTTTA+GGG - chr3_3:79069702-79069721 None:intergenic 25.0%
! CTAAGATATGTTTCAAATTG+GGG + chr3_3:79069531-79069550 Msa0475690:intron 25.0%
! TTTATTTCATGGTTGAACAT+AGG + chr3_3:79069614-79069633 Msa0475690:intron 25.0%
! TTATTTCATGGTTGAACATA+GGG + chr3_3:79069615-79069634 Msa0475690:intron 25.0%
! TGCAAAAACATGATAGTTTA+GGG + chr3_3:79069702-79069721 Msa0475690:intron 25.0%
! TGCACAACATCAAATTATTT+AGG - chr3_3:79069806-79069825 None:intergenic 25.0%
! TTGTGCATATGTCAATAAAA+CGG + chr3_3:79069819-79069838 Msa0475690:intron 25.0%
!! TTTAGAGTACTCTTACATTA+CGG + chr3_3:79070193-79070212 Msa0475690:intron 25.0%
!!! ATTTAGTATCTAGTTCTTTC+AGG + chr3_3:79070435-79070454 Msa0475690:intron 25.0%
! ATGATATAAATTAGGTAGAG+AGG - chr3_3:79070496-79070515 None:intergenic 25.0%
!!! AATTTTGAGTGGATTATGTA+TGG - chr3_3:79070802-79070821 None:intergenic 25.0%
!! GGTTATTATTGAGGATTTTT+AGG + chr3_3:79070946-79070965 Msa0475690:intron 25.0%
!!! TATTATTGAGGATTTTTAGG+TGG + chr3_3:79070949-79070968 Msa0475690:intron 25.0%
!!! ATTATTGAGGATTTTTAGGT+GGG + chr3_3:79070950-79070969 Msa0475690:intron 25.0%
!! GGGTAAAATTTTCTTCAATA+AGG + chr3_3:79070973-79070992 Msa0475690:intron 25.0%
! ACTTAATTTATTATCGGGTA+TGG + chr3_3:79071046-79071065 Msa0475690:intron 25.0%
! CTTAATTTATTATCGGGTAT+GGG + chr3_3:79071047-79071066 Msa0475690:intron 25.0%
! TTATAAACGTTGAAACTGAA+AGG - chr3_3:79071409-79071428 None:intergenic 25.0%
! TTGTAAAAAAATTGTTCCGA+AGG + chr3_3:79071642-79071661 Msa0475690:intron 25.0%
!!! ACCGTTGCATTAATTTTTTA+AGG - chr3_3:79072473-79072492 None:intergenic 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG - chr3_3:79072728-79072747 None:intergenic 25.0%
!! CAAACTTCTCTACATTTTTA+AGG - chr3_3:79072738-79072757 None:intergenic 25.0%
! AGAGAAGTTTGAAAAAAAGT+CGG + chr3_3:79072747-79072766 Msa0475690:intron 25.0%
! AATGTAGAAGCAATTGAATT+TGG + chr3_3:79072801-79072820 Msa0475690:intron 25.0%
! ATGTAGAAGCAATTGAATTT+GGG + chr3_3:79072802-79072821 Msa0475690:intron 25.0%
!! TTTGGTAATTCAATTATTGG+AGG - chr3_3:79072972-79072991 None:intergenic 25.0%
!!! TGATGAAAAGTTGATATATG+TGG + chr3_3:79073179-79073198 Msa0475690:intron 25.0%
!! TTTTACTTATATTTCAGAGG+AGG + chr3_3:79073242-79073261 Msa0475690:intron 25.0%
! TACAAGATACCATTTAATCA+TGG + chr3_3:79073404-79073423 Msa0475690:CDS 25.0%
! TTGTTGAATTGAATTCGAAA+TGG + chr3_3:79073526-79073545 Msa0475690:intron 25.0%
!! TCTAGACAAAATACATTTTG+GGG - chr3_3:79073630-79073649 None:intergenic 25.0%
!! CTTCTAGACAAAATACATTT+TGG - chr3_3:79073632-79073651 None:intergenic 25.0%
! GACACAATGTTAATCTAAAA+AGG - chr3_3:79073680-79073699 None:intergenic 25.0%
! AAAGACTTATATCAATTTGG+TGG - chr3_3:79073726-79073745 None:intergenic 25.0%
! ACCAAATTGATATAAGTCTT+TGG + chr3_3:79073725-79073744 Msa0475690:intron 25.0%
! TCCAAAGACTTATATCAATT+TGG - chr3_3:79073729-79073748 None:intergenic 25.0%
! ATAGAGACATCAATCTAATT+GGG + chr3_3:79073849-79073868 Msa0475690:intron 25.0%
! TAATTATTAACTGACAGTAG+GGG - chr3_3:79074007-79074026 None:intergenic 25.0%
! GATACAAGTCAATAACTTAA+CGG + chr3_3:79074275-79074294 Msa0475690:intron 25.0%
! GAGAATTATGTCAAACTAAA+AGG + chr3_3:79074413-79074432 Msa0475690:intron 25.0%
!! CAAATTGACTTACAAAATCA+AGG + chr3_3:79074630-79074649 Msa0475690:intron 25.0%
! AAGAAATGAGCAAATATACT+CGG + chr3_3:79074725-79074744 Msa0475690:intron 25.0%
!!! AGACTCTTTATTTTCATGTT+AGG - chr3_3:79075224-79075243 None:intergenic 25.0%
! ATTGGTTGAAATCATATAAG+AGG + chr3_3:79075315-79075334 Msa0475690:intron 25.0%
! TTATGAGTGAAATCATAGAT+TGG + chr3_3:79075338-79075357 Msa0475690:intron 25.0%
!!! GTAGTTTTGGTATCTTATTT+TGG - chr3_3:79075429-79075448 None:intergenic 25.0%
! TTTATTGATGAAATTGATCG+AGG + chr3_3:79075675-79075694 Msa0475690:intron 25.0%
!! TTTAATGAGTGCTTTTCAAT+AGG - chr3_3:79075728-79075747 None:intergenic 25.0%
! TATGTATATTCTTTCCTAAG+TGG + chr3_3:79075943-79075962 Msa0475690:intron 25.0%
! ATGTATATTCTTTCCTAAGT+GGG + chr3_3:79075944-79075963 Msa0475690:intron 25.0%
!! ACTTAATCAAGCTCATATTT+TGG + chr3_3:79076003-79076022 Msa0475690:CDS 25.0%
! AGAAGAAGTAAAAATAGTGT+TGG - chr3_3:79076101-79076120 None:intergenic 25.0%
!! AGCATATATAATTTTCACAC+TGG + chr3_3:79076278-79076297 Msa0475690:intron 25.0%
! TCCAATTCTATAATCTTCAA+TGG + chr3_3:79076371-79076390 Msa0475690:intron 25.0%
!! GTCAGTTTTACTTACATTTT+AGG - chr3_3:79076583-79076602 None:intergenic 25.0%
!!! TTTTTTCTTACAATTTGGGA+CGG + chr3_3:79076844-79076863 Msa0475690:intron 25.0%
! TTGACGAGAAAGAATTTAAT+TGG - chr3_3:79076937-79076956 None:intergenic 25.0%
! TATCAATATCAACTATGAAG+TGG + chr3_3:79077348-79077367 Msa0475690:intron 25.0%
!!! GTGAGATAGTTCTATTTTAA+TGG - chr3_3:79077610-79077629 None:intergenic 25.0%
! CTGTAAGAATGATATATTGT+TGG + chr3_3:79077736-79077755 Msa0475690:intron 25.0%
! AAGAACTCAATAGTAAAAAG+TGG + chr3_3:79077807-79077826 Msa0475690:intron 25.0%
!! CTTATTTGTGGACTATATAA+TGG - chr3_3:79077895-79077914 None:intergenic 25.0%
!! CAGTTAAATCGGATATTTTT+AGG - chr3_3:79077947-79077966 None:intergenic 25.0%
! CACTATATATTTGCAATTCA+GGG + chr3_3:79078165-79078184 Msa0475690:intron 25.0%
! GTTATCGTTCATTAATATAC+AGG + chr3_3:79078283-79078302 Msa0475690:intron 25.0%
!! CAAATACAGTATTGAAAACA+AGG - chr3_3:79078360-79078379 None:intergenic 25.0%
! ATATATATAGGACACTTGTA+CGG - chr3_3:79078489-79078508 None:intergenic 25.0%
! CATTAATTAATTCCTAGAGT+GGG - chr3_3:79079075-79079094 None:intergenic 25.0%
! ACACATTATATTAACTCACT+GGG - chr3_3:79079174-79079193 None:intergenic 25.0%
! TAAACAACTAGTAGAACTAT+TGG + chr3_3:79079233-79079252 Msa0475690:three_prime_UTR 25.0%
! TAGGTTTTCAGATAAGAACA+GGG + chr3_3:79065380-79065399 Msa0475690:five_prime_UTR 30.0%
ATTGAGATGTTGCAAAAACA+AGG - chr3_3:79065574-79065593 None:intergenic 30.0%
AGGAAGATACTTGACAATAT+TGG - chr3_3:79065597-79065616 None:intergenic 30.0%
AATATTGTCAAGTATCTTCC+TGG + chr3_3:79065596-79065615 Msa0475690:CDS 30.0%
AAAATAGTAGAACAATTCCG+TGG - chr3_3:79065696-79065715 None:intergenic 30.0%
TATTACCTATTTCAAAGGCA+AGG - chr3_3:79065799-79065818 None:intergenic 30.0%
! TTAAAACGTGAGACTTTTTG+TGG + chr3_3:79066074-79066093 Msa0475690:intron 30.0%
AATAATGAGATGATTGATGG+CGG + chr3_3:79066115-79066134 Msa0475690:intron 30.0%
GGTTTATTGATGAGAGTAAA+AGG + chr3_3:79066294-79066313 Msa0475690:intron 30.0%
!! ACATTTTGAAGACATTGCAA+TGG + chr3_3:79066351-79066370 Msa0475690:intron 30.0%
AGCTTCATAACTCATAAGAA+TGG - chr3_3:79066391-79066410 None:intergenic 30.0%
TTCTATTCCATCAAAAGTAG+GGG - chr3_3:79066473-79066492 None:intergenic 30.0%
! ACAGACAAAATTTGAGTTCT+GGG - chr3_3:79066696-79066715 None:intergenic 30.0%
! ACAGACAAAATTTGAGTTCT+GGG - chr3_3:79066696-79066715 None:intergenic 30.0%
AAGAAAAAAACGTGAGTTCT+GGG - chr3_3:79066795-79066814 None:intergenic 30.0%
AAAGAAAAAAACGTGAGTTC+TGG - chr3_3:79066796-79066815 None:intergenic 30.0%
AAGAAAAAAACGTGAGTTCT+GGG - chr3_3:79066795-79066814 None:intergenic 30.0%
AAAGAAAAAAACGTGAGTTC+TGG - chr3_3:79066796-79066815 None:intergenic 30.0%
AAGAAAAAAACGTGAGTTCT+GGG - chr3_3:79066795-79066814 None:intergenic 30.0%
AAAGAAAAAAACGTGAGTTC+TGG - chr3_3:79066796-79066815 None:intergenic 30.0%
GGACATAGTTTACTAAGTTA+GGG - chr3_3:79067149-79067168 None:intergenic 30.0%
TGGACATAGTTTACTAAGTT+AGG - chr3_3:79067150-79067169 None:intergenic 30.0%
TAAGGAGAATTTGGTTGTAT+TGG - chr3_3:79067347-79067366 None:intergenic 30.0%
TGATACCATATTAGAAATCG+TGG + chr3_3:79067733-79067752 Msa0475690:intron 30.0%
TAACACAATCTTAGAAATCG+TGG - chr3_3:79067782-79067801 None:intergenic 30.0%
!! CAAATTATTTGAAAGCACTC+GGG - chr3_3:79067877-79067896 None:intergenic 30.0%
AAAAATATGATTCGTTGTGG+CGG - chr3_3:79068200-79068219 None:intergenic 30.0%
AATTTATCATAGGTATGGAG+AGG - chr3_3:79068262-79068281 None:intergenic 30.0%
CAACCTACGTAATTTATCAT+AGG - chr3_3:79068272-79068291 None:intergenic 30.0%
!! ATACTGATTTCATTTCTTCC+CGG + chr3_3:79068313-79068332 Msa0475690:intron 30.0%
TAGCAAAGAAATATCTTAGC+CGG - chr3_3:79068335-79068354 None:intergenic 30.0%
!!! ATATTTTTGGATTTGCCTGT+GGG + chr3_3:79068421-79068440 Msa0475690:CDS 30.0%
TTCTCATCAATTTCTTAGGA+AGG + chr3_3:79068510-79068529 Msa0475690:CDS 30.0%
TCAAATAAAGTGTACATTGC+TGG + chr3_3:79068670-79068689 Msa0475690:CDS 30.0%
! CCTAATACATTTTTGTTGAC+CGG - chr3_3:79068767-79068786 None:intergenic 30.0%
CGGTCAACAAAAATGTATTA+GGG + chr3_3:79068765-79068784 Msa0475690:intron 30.0%
CTATAAATTTCCTTTCTTGC+AGG + chr3_3:79069037-79069056 Msa0475690:intron 30.0%
! TTTTTATCCTGGTCAATTTC+AGG - chr3_3:79069139-79069158 None:intergenic 30.0%
!! CGATTTTGTTCGATTTGAAA+AGG - chr3_3:79069331-79069350 None:intergenic 30.0%
CTGCAAAAACATGATAGTTT+AGG - chr3_3:79069701-79069720 None:intergenic 30.0%
TTATTTCATGGTTGAGCATA+GGG - chr3_3:79069442-79069461 None:intergenic 30.0%
TTTATTTCATGGTTGAGCAT+AGG - chr3_3:79069443-79069462 None:intergenic 30.0%
TAAACAAGGAATAAAGCATG+TGG + chr3_3:79069459-79069478 Msa0475690:intron 30.0%
AAACAAGGAATAAAGCATGT+GGG + chr3_3:79069460-79069479 Msa0475690:intron 30.0%
TGTTAGTGTGTTGAATAAAG+TGG - chr3_3:79069496-79069515 None:intergenic 30.0%
!!! GTTTCAAATTGGGGTTTTTT+TGG + chr3_3:79069540-79069559 Msa0475690:intron 30.0%
AAACAAGGAATAAAGCATGT+GGG - chr3_3:79069460-79069479 None:intergenic 30.0%
TAAACAAGGAATAAAGCATG+TGG - chr3_3:79069459-79069478 None:intergenic 30.0%
GTTCAACCATGAAATAAACA+AGG - chr3_3:79069612-79069631 None:intergenic 30.0%
TATTTCATGGTTGAACATAG+GGG + chr3_3:79069616-79069635 Msa0475690:intron 30.0%
CTGCAAAAACATGATAGTTT+AGG + chr3_3:79069701-79069720 Msa0475690:intron 30.0%
!! GATTTTGTTCGATTTGAAAG+AGG + chr3_3:79069727-79069746 Msa0475690:intron 30.0%
TTGAAAAGAGAGAAAAACGT+TGG - chr3_3:79069893-79069912 None:intergenic 30.0%
! TTTTATAACCTCTAAATCGC+TGG + chr3_3:79069938-79069957 Msa0475690:intron 30.0%
!! ATTTAGTTTGCTTGTGATTG+AGG - chr3_3:79070021-79070040 None:intergenic 30.0%
!! TTTGGTAATAGGGTTTTCAT+TGG - chr3_3:79070327-79070346 None:intergenic 30.0%
TTTCACATTATCTACAGCAA+AGG + chr3_3:79070548-79070567 Msa0475690:intron 30.0%
! GTTTTATGATGTGAATGAAG+TGG + chr3_3:79070875-79070894 Msa0475690:intron 30.0%
!!! TTATTGAGGATTTTTAGGTG+GGG + chr3_3:79070951-79070970 Msa0475690:intron 30.0%
TTTGACTACCCATTATTATC+TGG - chr3_3:79071112-79071131 None:intergenic 30.0%
TTTAATATCTGCCTTTGCTA+GGG - chr3_3:79071235-79071254 None:intergenic 30.0%
ATTTAATATCTGCCTTTGCT+AGG - chr3_3:79071236-79071255 None:intergenic 30.0%
TGTGAAAGGATTTATATACG+TGG - chr3_3:79071270-79071289 None:intergenic 30.0%
! TTTGTTGTAGATCATGTGAA+AGG - chr3_3:79071284-79071303 None:intergenic 30.0%
TTTCACATGATCTACAACAA+AGG + chr3_3:79071283-79071302 Msa0475690:intron 30.0%
ATTTAGTATCCATTCCTTTC+AGG + chr3_3:79071321-79071340 Msa0475690:intron 30.0%
AAGGAGAGATGTTCAAATTA+CGG + chr3_3:79071526-79071545 Msa0475690:intron 30.0%
ATCCAAATATTTGTGATGCA+TGG + chr3_3:79071591-79071610 Msa0475690:intron 30.0%
AACCATGCATCACAAATATT+TGG - chr3_3:79071596-79071615 None:intergenic 30.0%
TATTTGTGATGCATGGTTTA+AGG + chr3_3:79071598-79071617 Msa0475690:intron 30.0%
TGTCATAGAGTTACCAAAAA+GGG + chr3_3:79071795-79071814 Msa0475690:intron 30.0%
!!! TATTGGTGTTAATCCCTTTT+TGG - chr3_3:79071811-79071830 None:intergenic 30.0%
ATGCTTAGTAATATTCAGTC+TGG + chr3_3:79071984-79072003 Msa0475690:intron 30.0%
GATTACATTGAAAGGATAGA+TGG + chr3_3:79072009-79072028 Msa0475690:intron 30.0%
AAGGATAGATGGTAAAATGA+CGG + chr3_3:79072020-79072039 Msa0475690:intron 30.0%
!! TTGATGGTTCATGGTTTTTA+AGG - chr3_3:79072082-79072101 None:intergenic 30.0%
!! AAAACTAAGTTGATGGTTCA+TGG - chr3_3:79072091-79072110 None:intergenic 30.0%
GTAACAAAAAAACAGACAGA+CGG + chr3_3:79072240-79072259 Msa0475690:intron 30.0%
! AAGTAACATTCAACAGCTTT+TGG + chr3_3:79072623-79072642 Msa0475690:intron 30.0%
GAGAAGTTTGAAAAAAAGTC+GGG + chr3_3:79072748-79072767 Msa0475690:intron 30.0%
AACAATAAGAATGGTACACA+AGG - chr3_3:79073141-79073160 None:intergenic 30.0%
TTAAAGGGCAACAATAAGAA+TGG - chr3_3:79073150-79073169 None:intergenic 30.0%
GTATGTATCCCTGAATAAAA+AGG - chr3_3:79073346-79073365 None:intergenic 30.0%
TTTATTCAGGGATACATACT+AGG + chr3_3:79073347-79073366 Msa0475690:intron 30.0%
ATACCATTTAATCATGGCAT+GGG + chr3_3:79073410-79073429 Msa0475690:CDS 30.0%
CATAGAGACATCAATCTAAT+TGG + chr3_3:79073848-79073867 Msa0475690:intron 30.0%
GAGAATTCTGTCAAACTAAA+AGG - chr3_3:79073917-79073936 None:intergenic 30.0%
ATTAAACAGATACTGACATC+AGG + chr3_3:79074312-79074331 Msa0475690:intron 30.0%
TTAAACAGATACTGACATCA+GGG + chr3_3:79074313-79074332 Msa0475690:intron 30.0%
! AATAGGTCAAATACCACTTT+TGG - chr3_3:79074440-79074459 None:intergenic 30.0%
! TTTGTAAGTCAATTTGCTCT+TGG - chr3_3:79074626-79074645 None:intergenic 30.0%
CGAGGAATAAACTATCAATT+TGG - chr3_3:79074657-79074676 None:intergenic 30.0%
CAAATTTACCGTCCAAAAAT+CGG - chr3_3:79074702-79074721 None:intergenic 30.0%
AGAAATGAGCAAATATACTC+GGG + chr3_3:79074726-79074745 Msa0475690:intron 30.0%
AAAATAGGTGATCAAAGTTG+CGG + chr3_3:79075398-79075417 Msa0475690:intron 30.0%
! CAGGCTATTAATTGTAGTTT+TGG - chr3_3:79075442-79075461 None:intergenic 30.0%
ACTACAATTAATAGCCTGTT+TGG + chr3_3:79075444-79075463 Msa0475690:intron 30.0%
! ATTAGTTTAGAGAAGTTACC+CGG - chr3_3:79076147-79076166 None:intergenic 30.0%
TCCATAAAAATTGGGCTATT+AGG + chr3_3:79076216-79076235 Msa0475690:intron 30.0%
! ACCTAATAGCCCAATTTTTA+TGG - chr3_3:79076220-79076239 None:intergenic 30.0%
TCATTGAATTGAATCACCAT+TGG - chr3_3:79076336-79076355 None:intergenic 30.0%
ATGGTGATTCAATTCAATGA+AGG + chr3_3:79076336-79076355 Msa0475690:intron 30.0%
GCCATTGAAGATTATAGAAT+TGG - chr3_3:79076375-79076394 None:intergenic 30.0%
GATCATATGAGGATTTATGT+TGG - chr3_3:79076489-79076508 None:intergenic 30.0%
GAAGAAGATATGATCATATG+AGG - chr3_3:79076500-79076519 None:intergenic 30.0%
TTCTATGGAATACGTTTCAT+GGG - chr3_3:79076763-79076782 None:intergenic 30.0%
TTTCTATGGAATACGTTTCA+TGG - chr3_3:79076764-79076783 None:intergenic 30.0%
TTCAATAGTGCAATTTCTTG+AGG - chr3_3:79076971-79076990 None:intergenic 30.0%
ATATCCATTTGTCAAGGTTA+AGG - chr3_3:79076997-79077016 None:intergenic 30.0%
TTGACAAATGGATATTACTC+CGG + chr3_3:79077002-79077021 Msa0475690:intron 30.0%
! TAAGTAATGTGAGACCTTTT+CGG - chr3_3:79077032-79077051 None:intergenic 30.0%
TTTGTAAAAGACATCTGGTT+AGG - chr3_3:79077101-79077120 None:intergenic 30.0%
GATAATACACTAATTTGGGT+TGG + chr3_3:79077499-79077518 Msa0475690:intron 30.0%
AAATATGCATGATTCTACCA+TGG - chr3_3:79077988-79078007 None:intergenic 30.0%
ATATTTCCTCTGTTCCTATT+GGG + chr3_3:79078002-79078021 Msa0475690:CDS 30.0%
CCTGAATTGCAAATATATAG+TGG - chr3_3:79078167-79078186 None:intergenic 30.0%
CCACTATATATTTGCAATTC+AGG + chr3_3:79078164-79078183 Msa0475690:intron 30.0%
CATGTAAATCTTAGCAGAAA+AGG + chr3_3:79078261-79078280 Msa0475690:intron 30.0%
! CATCGGTGTTCAATATATAT+AGG - chr3_3:79078501-79078520 None:intergenic 30.0%
ATTAAATGTGTTTCGTTGTC+CGG - chr3_3:79078528-79078547 None:intergenic 30.0%
CGAAACACATTTAATATCAG+AGG + chr3_3:79078533-79078552 Msa0475690:intron 30.0%
! GACAATTTTTGTTAACAGTG+TGG + chr3_3:79078629-79078648 Msa0475690:intron 30.0%
TATTCTAATTCTCAAGTAGC+AGG + chr3_3:79078740-79078759 Msa0475690:CDS 30.0%
ATTCTAATTCTCAAGTAGCA+GGG + chr3_3:79078741-79078760 Msa0475690:CDS 30.0%
TATATATAATTACAGGGAGG+AGG + chr3_3:79078983-79079002 Msa0475690:intron 30.0%
GCATTAATTAATTCCTAGAG+TGG - chr3_3:79079076-79079095 None:intergenic 30.0%
TAATATAGGAGCAAGTTCTT+TGG + chr3_3:79079146-79079165 Msa0475690:three_prime_UTR 30.0%
CACACATTATATTAACTCAC+TGG - chr3_3:79079175-79079194 None:intergenic 30.0%
TTGTTTAATTGTCAAAGCCT+GGG - chr3_3:79079220-79079239 None:intergenic 30.0%
! CTAGGTTTTCAGATAAGAAC+AGG + chr3_3:79065379-79065398 Msa0475690:five_prime_UTR 35.0%
!! ACTCTAAAATGGCAATGCTT+AGG + chr3_3:79065435-79065454 Msa0475690:exon 35.0%
AGATGTTGCAAAAACAAGGT+TGG - chr3_3:79065570-79065589 None:intergenic 35.0%
!! AAGTATCTTCCTGGTTTTCA+AGG + chr3_3:79065605-79065624 Msa0475690:CDS 35.0%
AGTTTCCAGTATAAAGGGAA+GGG - chr3_3:79065633-79065652 None:intergenic 35.0%
TTCCCTTTATACTGGAAACT+GGG + chr3_3:79065633-79065652 Msa0475690:CDS 35.0%
TACCCAGTTTCCAGTATAAA+GGG - chr3_3:79065638-79065657 None:intergenic 35.0%
TGAAACAGATGAAAATGCCA+CGG + chr3_3:79065676-79065695 Msa0475690:CDS 35.0%
ACTTAGCATTGCAACTAACT+GGG - chr3_3:79065945-79065964 None:intergenic 35.0%
TACTTAGCATTGCAACTAAC+TGG - chr3_3:79065946-79065965 None:intergenic 35.0%
GCTTACCAAATTTGATCTTG+AGG + chr3_3:79066185-79066204 Msa0475690:CDS 35.0%
! GACAGACAAAATTTGAGTTC+TGG - chr3_3:79066697-79066716 None:intergenic 35.0%
! GACAGACAAAATTTGAGTTC+TGG - chr3_3:79066697-79066716 None:intergenic 35.0%
! TTCTCACGTTCTGGATTATT+TGG + chr3_3:79067274-79067293 Msa0475690:intron 35.0%
TTGTATTGGAGAGAGGATTA+GGG - chr3_3:79067333-79067352 None:intergenic 35.0%
AATTTGGTTGTATTGGAGAG+AGG - chr3_3:79067340-79067359 None:intergenic 35.0%
TGTTATCAGGTTTCCGTTAT+CGG - chr3_3:79067652-79067671 None:intergenic 35.0%
CTCAACCACGATTTCTAATA+TGG - chr3_3:79067486-79067505 None:intergenic 35.0%
ATCTTAGAAATCGTGGTTGT+GGG - chr3_3:79067775-79067794 None:intergenic 35.0%
AATCTTAGAAATCGTGGTTG+TGG - chr3_3:79067776-79067795 None:intergenic 35.0%
TTACGATCAATATTTAGCCC+AGG + chr3_3:79067811-79067830 Msa0475690:intron 35.0%
TTAACGAACAGCTACTGTAA+GGG - chr3_3:79067903-79067922 None:intergenic 35.0%
GGGCAAATATCTAAATTCTG+AGG - chr3_3:79068235-79068254 None:intergenic 35.0%
AGCAAAGAAATATCTTAGCC+GGG - chr3_3:79068334-79068353 None:intergenic 35.0%
!!! CATATTTTTGGATTTGCCTG+TGG + chr3_3:79068420-79068439 Msa0475690:CDS 35.0%
TGGATTCTCTTATCCCAAAA+CGG + chr3_3:79068447-79068466 Msa0475690:CDS 35.0%
CCGGTCAACAAAAATGTATT+AGG + chr3_3:79068764-79068783 Msa0475690:intron 35.0%
!! GCTCGAAATAATTCTAGGAT+AGG - chr3_3:79069178-79069197 None:intergenic 35.0%
GCTTTGCTCGAAATAATTCT+AGG - chr3_3:79069183-79069202 None:intergenic 35.0%
!! TTTCTGGAGTTGAAAATAGG+AGG - chr3_3:79069667-79069686 None:intergenic 35.0%
TATTTCATGGTTGAGCATAG+GGG - chr3_3:79069441-79069460 None:intergenic 35.0%
GCTCAACCATGAAATAAACA+AGG + chr3_3:79069445-79069464 Msa0475690:intron 35.0%
GGTTAGTGTGTTGAATAAAG+TGG + chr3_3:79069561-79069580 Msa0475690:intron 35.0%
ATTTCATGGTTGAACATAGG+GGG + chr3_3:79069617-79069636 Msa0475690:intron 35.0%
!! TTTCTGGAGTTGAAAATAGG+AGG + chr3_3:79069667-79069686 Msa0475690:intron 35.0%
! TTTTGATCAGCTCACGAAAA+TGG - chr3_3:79069758-79069777 None:intergenic 35.0%
TGATATAAATCAGGCAGCTT+TGG - chr3_3:79070345-79070364 None:intergenic 35.0%
ATTATCTACAGCAAAGGCTA+AGG + chr3_3:79070554-79070573 Msa0475690:intron 35.0%
ATCATATTATCCGTACCCAT+GGG - chr3_3:79070593-79070612 None:intergenic 35.0%
TATCATATTATCCGTACCCA+TGG - chr3_3:79070594-79070613 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG + chr3_3:79070881-79070900 Msa0475690:intron 35.0%
!!! TATTGAGGATTTTTAGGTGG+GGG + chr3_3:79070952-79070971 Msa0475690:intron 35.0%
TGGATTGTATCCATACCTAT+GGG - chr3_3:79071075-79071094 None:intergenic 35.0%
TTGGATTGTATCCATACCTA+TGG - chr3_3:79071076-79071095 None:intergenic 35.0%
TGTCTGTGTCCAGATAATAA+TGG + chr3_3:79071100-79071119 Msa0475690:intron 35.0%
GTCTGTGTCCAGATAATAAT+GGG + chr3_3:79071101-79071120 Msa0475690:intron 35.0%
TTAATATCTGCCTTTGCTAG+GGG - chr3_3:79071234-79071253 None:intergenic 35.0%
TTTCACATGATCTACAGCAA+AGG + chr3_3:79070397-79070416 Msa0475690:intron 35.0%
GTGCGTATAATTCACATGAA+AGG - chr3_3:79071488-79071507 None:intergenic 35.0%
! ATGAAAGCTTTATCAAGAGC+AGG + chr3_3:79071723-79071742 Msa0475690:intron 35.0%
CTGTCATAGAGTTACCAAAA+AGG + chr3_3:79071794-79071813 Msa0475690:intron 35.0%
GTCTGGAAGATTACATTGAA+AGG + chr3_3:79072001-79072020 Msa0475690:intron 35.0%
AATGTGTGTATATATTCGCG+AGG + chr3_3:79072287-79072306 Msa0475690:intron 35.0%
TAGAAGCAATTGAATTTGGG+AGG + chr3_3:79072805-79072824 Msa0475690:intron 35.0%
AAATTGGTTAGGGGCAAAAA+TGG + chr3_3:79072913-79072932 Msa0475690:intron 35.0%
GGGCAAAAATGGAAATTCAT+AGG + chr3_3:79072924-79072943 Msa0475690:intron 35.0%
GGGCAAATTGGTAAATTCAA+TGG + chr3_3:79073005-79073024 Msa0475690:intron 35.0%
GATACCATTTAATCATGGCA+TGG + chr3_3:79073409-79073428 Msa0475690:CDS 35.0%
! TATTTCTGATGAACTCTACG+AGG + chr3_3:79073436-79073455 Msa0475690:CDS 35.0%
! TATGTTTTCGTCACATGACT+GGG - chr3_3:79073832-79073851 None:intergenic 35.0%
GATCCAAGTCAACAACTTAA+CGG - chr3_3:79074046-79074065 None:intergenic 35.0%
TGTCAAAACGCTACGTTTAA+TGG - chr3_3:79074227-79074246 None:intergenic 35.0%
TAAACAGATACTGACATCAG+GGG + chr3_3:79074314-79074333 Msa0475690:intron 35.0%
CAAACTAAAAGGACCAAAAG+TGG + chr3_3:79074424-79074443 Msa0475690:intron 35.0%
CAGAAACAAACAAACAATCG+AGG - chr3_3:79074675-79074694 None:intergenic 35.0%
!! TGTTTCTGTCATCCGATTTT+TGG + chr3_3:79074687-79074706 Msa0475690:intron 35.0%
CAGTTGTACCACTAAAAACA+TGG + chr3_3:79074780-79074799 Msa0475690:intron 35.0%
!!! CTGAAAAGCCATGTTTTTAG+TGG - chr3_3:79074791-79074810 None:intergenic 35.0%
! TCTGTCTAATTGCGCAATTT+TGG + chr3_3:79075123-79075142 Msa0475690:intron 35.0%
TTATTGTCACGCTGTCAAAT+AGG - chr3_3:79075192-79075211 None:intergenic 35.0%
TAATAGCCTGTTTGGTATAG+TGG + chr3_3:79075452-79075471 Msa0475690:intron 35.0%
AGCTTCCTAAAAATCACGAT+GGG - chr3_3:79075509-79075528 None:intergenic 35.0%
AAGCTTCCTAAAAATCACGA+TGG - chr3_3:79075510-79075529 None:intergenic 35.0%
! TTAGCTTCTGTTTGTTACAG+CGG - chr3_3:79075576-79075595 None:intergenic 35.0%
TTAAGTCCTGAAATAGTCTG+AGG - chr3_3:79075989-79076008 None:intergenic 35.0%
GAATTGAATCACCATTGGAA+AGG - chr3_3:79076331-79076350 None:intergenic 35.0%
!! GAAAGAGTGTTGAGTTGTAT+TGG + chr3_3:79076402-79076421 Msa0475690:intron 35.0%
! TGGTTTTCCAATCTAGCATA+TGG + chr3_3:79076422-79076441 Msa0475690:intron 35.0%
! GGTTTTCCAATCTAGCATAT+GGG + chr3_3:79076423-79076442 Msa0475690:intron 35.0%
!!! TACTTACATTTTGAAACGGG+TGG - chr3_3:79076540-79076559 None:intergenic 35.0%
GAAGATATTCGGAGTTATGA+TGG - chr3_3:79076913-79076932 None:intergenic 35.0%
GGAGTAATATCCATTTGTCA+AGG - chr3_3:79077003-79077022 None:intergenic 35.0%
AAGGTCTCACATTACTTAAG+AGG + chr3_3:79077034-79077053 Msa0475690:intron 35.0%
AGTTCGCACTAGACTTAAAA+TGG + chr3_3:79077136-79077155 Msa0475690:intron 35.0%
!! ACCTTTAAAATGCAGTGATG+TGG + chr3_3:79077164-79077183 Msa0475690:intron 35.0%
! ACCACATCACTGCATTTTAA+AGG - chr3_3:79077168-79077187 None:intergenic 35.0%
CATATTTCCTCTGTTCCTAT+TGG + chr3_3:79078001-79078020 Msa0475690:CDS 35.0%
! ATTTTGAACATTAGCGTCGT+TGG - chr3_3:79078028-79078047 None:intergenic 35.0%
ATAAAGGTAGATTTAGCAGC+AGG + chr3_3:79078097-79078116 Msa0475690:intron 35.0%
TAAAGGTAGATTTAGCAGCA+GGG + chr3_3:79078098-79078117 Msa0475690:intron 35.0%
ACTAACTCGCACAAAGATTA+GGG - chr3_3:79078132-79078151 None:intergenic 35.0%
AACTAACTCGCACAAAGATT+AGG - chr3_3:79078133-79078152 None:intergenic 35.0%
CTATCTATTTCGTGCTTGAA+AGG - chr3_3:79078228-79078247 None:intergenic 35.0%
TAAAGCTTAATGATGTGTCG+AGG - chr3_3:79078394-79078413 None:intergenic 35.0%
! TGACATGACTGTTCCATTTT+TGG + chr3_3:79078658-79078677 Msa0475690:CDS 35.0%
ACTATTCCATTGTTGACGAT+TGG + chr3_3:79078708-79078727 Msa0475690:CDS 35.0%
GATATCTAATTACCCACTCT+AGG + chr3_3:79079060-79079079 Msa0475690:CDS 35.0%
TTCTCACTATATAACATCCC+AGG + chr3_3:79079200-79079219 Msa0475690:three_prime_UTR 35.0%
GTTGTTTAATTGTCAAAGCC+TGG - chr3_3:79079221-79079240 None:intergenic 35.0%
ACAACTAGTAGAACTATTGG+TGG + chr3_3:79079236-79079255 Msa0475690:three_prime_UTR 35.0%
CTCAAACACAAGACAAAGAA+GGG - chr3_3:79079317-79079336 None:intergenic 35.0%
ACTCAAACACAAGACAAAGA+AGG - chr3_3:79079318-79079337 None:intergenic 35.0%
ATAAGAACAGGGAAGAGAAG+TGG + chr3_3:79065391-79065410 Msa0475690:five_prime_UTR 40.0%
TGTTGCAAAAACAAGGTTGG+TGG - chr3_3:79065567-79065586 None:intergenic 40.0%
GTTTCCAGTATAAAGGGAAG+GGG - chr3_3:79065632-79065651 None:intergenic 40.0%
CAGTTTCCAGTATAAAGGGA+AGG - chr3_3:79065634-79065653 None:intergenic 40.0%
CTTCCCTTTATACTGGAAAC+TGG + chr3_3:79065632-79065651 Msa0475690:CDS 40.0%
GTACCCAGTTTCCAGTATAA+AGG - chr3_3:79065639-79065658 None:intergenic 40.0%
TGTGGCCTCAAGATCAAATT+TGG - chr3_3:79066193-79066212 None:intergenic 40.0%
TCAACCTTTGTCCATGAATG+TGG - chr3_3:79066211-79066230 None:intergenic 40.0%
TTCCTACAAGAGTGGATCTT+TGG - chr3_3:79066420-79066439 None:intergenic 40.0%
!! CCATCAAAAGTAGGGGTATT+CGG - chr3_3:79066466-79066485 None:intergenic 40.0%
TGGAATAGAATAGTCCCAAC+AGG + chr3_3:79066483-79066502 Msa0475690:intron 40.0%
GGAATAGAATAGTCCCAACA+GGG + chr3_3:79066484-79066503 Msa0475690:intron 40.0%
GAATAGAATAGTCCCAACAG+GGG + chr3_3:79066485-79066504 Msa0475690:intron 40.0%
TCCAGAACGTGAGAAGATTA+GGG - chr3_3:79067269-79067288 None:intergenic 40.0%
ATCCAGAACGTGAGAAGATT+AGG - chr3_3:79067270-79067289 None:intergenic 40.0%
GTTGTATTGGAGAGAGGATT+AGG - chr3_3:79067334-79067353 None:intergenic 40.0%
GTTATCAGGTTTCCGTTATC+GGG - chr3_3:79067651-79067670 None:intergenic 40.0%
!! GATAACGGAAACCTGATAAC+AGG + chr3_3:79067651-79067670 Msa0475690:intron 40.0%
TCAGGTTTCCGTTATCCTTT+GGG - chr3_3:79067680-79067699 None:intergenic 40.0%
ATCAGGTTTCCGTTATCCTT+TGG - chr3_3:79067681-79067700 None:intergenic 40.0%
!! GATAACGGAAACCTGATAAC+AGG + chr3_3:79067651-79067670 Msa0475690:intron 40.0%
TCTTAGAAATCGTGGTTGTG+GGG - chr3_3:79067774-79067793 None:intergenic 40.0%
GTTAACGAACAGCTACTGTA+AGG - chr3_3:79067904-79067923 None:intergenic 40.0%
TCTCGGATGACAACATTACA+CGG - chr3_3:79067977-79067996 None:intergenic 40.0%
TCTTGAACGATAATTGGGAC+AGG - chr3_3:79068715-79068734 None:intergenic 40.0%
GAAGGTTTATCCATGGTTGA+AGG - chr3_3:79069075-79069094 None:intergenic 40.0%
TCAACCATGGATAAACCTTC+AGG + chr3_3:79069075-79069094 Msa0475690:CDS 40.0%
AAAGAATGATGCGAACCTGA+AGG - chr3_3:79069093-79069112 None:intergenic 40.0%
GATTATCCTCAGTTCCAAGA+TGG - chr3_3:79069117-79069136 None:intergenic 40.0%
GGATAATCCTGAAATTGACC+AGG + chr3_3:79069129-79069148 Msa0475690:intron 40.0%
TGGAGTTGAAAATAGGAGGT+AGG - chr3_3:79069671-79069690 None:intergenic 40.0%
!! GCGTTTCTGGAGTTGAAAAT+AGG - chr3_3:79069664-79069683 None:intergenic 40.0%
ATTTCATGGTTGAGCATAGG+GGG - chr3_3:79069440-79069459 None:intergenic 40.0%
GAATAAAGCATGTGGGTACA+AGG + chr3_3:79069467-79069486 Msa0475690:intron 40.0%
GAATAAAGCATGTGGGTACA+AGG - chr3_3:79069467-79069486 None:intergenic 40.0%
!! GCGTTTCTGGAGTTGAAAAT+AGG + chr3_3:79069664-79069683 Msa0475690:intron 40.0%
TGGAGTTGAAAATAGGAGGT+AGG + chr3_3:79069671-79069690 Msa0475690:intron 40.0%
! TTGTTCGATTTGAAAGAGGC+AGG + chr3_3:79069731-79069750 Msa0475690:intron 40.0%
GAGTTGAAGTCAAGAGAAAC+AGG - chr3_3:79069860-79069879 None:intergenic 40.0%
TTTGCTTGTGATTGAGGACA+GGG - chr3_3:79070015-79070034 None:intergenic 40.0%
! ATCAGGCAGCTTTGGTAATA+GGG - chr3_3:79070337-79070356 None:intergenic 40.0%
! AATCAGGCAGCTTTGGTAAT+AGG - chr3_3:79070338-79070357 None:intergenic 40.0%
GGTATCATACTTATCCAACG+GGG - chr3_3:79070627-79070646 None:intergenic 40.0%
GGGTATCATACTTATCCAAC+GGG - chr3_3:79070628-79070647 None:intergenic 40.0%
CGGGTATCATACTTATCCAA+CGG - chr3_3:79070629-79070648 None:intergenic 40.0%
!!! ATTGAGGATTTTTAGGTGGG+GGG + chr3_3:79070953-79070972 Msa0475690:intron 40.0%
ATACCCGTTTATTATACCCG+TGG + chr3_3:79071131-79071150 Msa0475690:intron 40.0%
CATCCACGGGTATAATAAAC+GGG - chr3_3:79071137-79071156 None:intergenic 40.0%
GCATCCACGGGTATAATAAA+CGG - chr3_3:79071138-79071157 None:intergenic 40.0%
GTTTGTTCACCTGAAAGGAA+TGG - chr3_3:79071333-79071352 None:intergenic 40.0%
! CAGAAGTTTGTTCACCTGAA+AGG - chr3_3:79071338-79071357 None:intergenic 40.0%
! TGATGCATGGTTTAAGGCAT+GGG + chr3_3:79071604-79071623 Msa0475690:intron 40.0%
AACTCTTTAGCGTCTTGTGT+AGG + chr3_3:79071867-79071886 Msa0475690:intron 40.0%
ATATTCGCGAGGTTGAAGAA+AGG + chr3_3:79072298-79072317 Msa0475690:intron 40.0%
GATACCTTAATCTCCCACAA+CGG + chr3_3:79072777-79072796 Msa0475690:intron 40.0%
ATTACCAAAATGCCCCTCAT+AGG + chr3_3:79072983-79073002 Msa0475690:intron 40.0%
TTACCAAAATGCCCCTCATA+GGG + chr3_3:79072984-79073003 Msa0475690:intron 40.0%
TTACCAATTTGCCCCTATGA+GGG - chr3_3:79072999-79073018 None:intergenic 40.0%
TTTACCAATTTGCCCCTATG+AGG - chr3_3:79073000-79073019 None:intergenic 40.0%
TTGTGAGCTAGCGATGTTAA+GGG - chr3_3:79073377-79073396 None:intergenic 40.0%
AGTCCCATGCCATGATTAAA+TGG - chr3_3:79073416-79073435 None:intergenic 40.0%
TCACTGCAAAAGAATTGTCG+AGG + chr3_3:79073585-79073604 Msa0475690:CDS 40.0%
! ATGTTTTCGTCACATGACTG+GGG - chr3_3:79073831-79073850 None:intergenic 40.0%
! CTATGTTTTCGTCACATGAC+TGG - chr3_3:79073833-79073852 None:intergenic 40.0%
CAAAGGTCAAATACCACGTT+TGG + chr3_3:79073890-79073909 Msa0475690:intron 40.0%
CAAACTAAAAGGACCAAACG+TGG - chr3_3:79073906-79073925 None:intergenic 40.0%
! TAGCCGTTAAGTTGTTGACT+TGG + chr3_3:79074040-79074059 Msa0475690:intron 40.0%
!! GTTGCCTTTTAAAAGCTCCA+GGG + chr3_3:79074071-79074090 Msa0475690:intron 40.0%
!! TCTGTCATCCGATTTTTGGA+CGG + chr3_3:79074691-79074710 Msa0475690:intron 40.0%
!! AATCACGATGGGTTAGCATT+GGG - chr3_3:79075498-79075517 None:intergenic 40.0%
!! AAATCACGATGGGTTAGCAT+TGG - chr3_3:79075499-79075518 None:intergenic 40.0%
! GCTAACCCATCGTGATTTTT+AGG + chr3_3:79075501-79075520 Msa0475690:intron 40.0%
! TTGTAGCTTTTGCCAAAACG+TGG + chr3_3:79075534-79075553 Msa0475690:intron 40.0%
! TGTAGCTTTTGCCAAAACGT+GGG + chr3_3:79075535-79075554 Msa0475690:intron 40.0%
AGGTAACTCATCAAGACTGT+TGG + chr3_3:79075695-79075714 Msa0475690:intron 40.0%
TAGTCTGAGGACACAACAAT+AGG - chr3_3:79075976-79075995 None:intergenic 40.0%
TTGTGTCCTCAGACTATTTC+AGG + chr3_3:79075980-79075999 Msa0475690:intron 40.0%
TCATTGGGTTCCATTGGATT+AGG - chr3_3:79076052-79076071 None:intergenic 40.0%
ATCCAATGGAACCCAATGAT+AGG + chr3_3:79076053-79076072 Msa0475690:CDS 40.0%
AGAAGTCTCCTCCTATCATT+GGG - chr3_3:79076067-79076086 None:intergenic 40.0%
AAGAAGTCTCCTCCTATCAT+TGG - chr3_3:79076068-79076087 None:intergenic 40.0%
GAGGAGACTTCTTATTCACA+AGG + chr3_3:79076075-79076094 Msa0475690:CDS 40.0%
AATCACCATTGGAAAGGTAG+AGG - chr3_3:79076325-79076344 None:intergenic 40.0%
GACTATCCCATATGCTAGAT+TGG - chr3_3:79076432-79076451 None:intergenic 40.0%
ATAGTCAAAGTTGAGCGAGA+GGG + chr3_3:79076446-79076465 Msa0475690:intron 40.0%
! TTTCTTACAATTTGGGACGG+AGG + chr3_3:79076847-79076866 Msa0475690:intron 40.0%
! TTCTTACAATTTGGGACGGA+GGG + chr3_3:79076848-79076867 Msa0475690:intron 40.0%
AGCACCTTAACCTTGACAAA+TGG + chr3_3:79076990-79077009 Msa0475690:intron 40.0%
CAACTATGAAGTGGTAGAAC+TGG + chr3_3:79077357-79077376 Msa0475690:intron 40.0%
AAATGCACTGCACATTCGAA+AGG + chr3_3:79078044-79078063 Msa0475690:CDS 40.0%
TTTGCAATTCAGGGAACTAC+AGG + chr3_3:79078174-79078193 Msa0475690:intron 40.0%
TTCAGGGAACTACAGGAAAA+TGG + chr3_3:79078181-79078200 Msa0475690:intron 40.0%
TATTGAACACCGATGTATGC+CGG + chr3_3:79078506-79078525 Msa0475690:intron 40.0%
ATTCCATTGTTGACGATTGG+AGG + chr3_3:79078711-79078730 Msa0475690:CDS 40.0%
ACACAAGGACTTACTCGAAT+CGG + chr3_3:79078855-79078874 Msa0475690:CDS 40.0%
GATGACATTTGCAACTGTGA+AGG + chr3_3:79078877-79078896 Msa0475690:CDS 40.0%
CATTCTTCACGTTTGTACTC+GGG - chr3_3:79079019-79079038 None:intergenic 40.0%
GCATTCTTCACGTTTGTACT+CGG - chr3_3:79079020-79079039 None:intergenic 40.0%
AATGCTTAGCCATGTTCAGT+AGG + chr3_3:79079035-79079054 Msa0475690:CDS 40.0%
AGATATCCACCTACTGAACA+TGG - chr3_3:79079047-79079066 None:intergenic 40.0%
TCATCATGTTGAACTCAGCT+TGG - chr3_3:79079100-79079119 None:intergenic 40.0%
AGGCTTAGTTCACATCACAG+TGG + chr3_3:79065455-79065474 Msa0475690:CDS 45.0%
TATACTGGAAACTGGGTACG+TGG + chr3_3:79065640-79065659 Msa0475690:CDS 45.0%
ATACTGGAAACTGGGTACGT+GGG + chr3_3:79065641-79065660 Msa0475690:CDS 45.0%
GGCAAGAGAGGATCTTCTTT+AGG - chr3_3:79065737-79065756 None:intergenic 45.0%
AAGAAGATCCTCTCTTGCCT+TGG + chr3_3:79065738-79065757 Msa0475690:CDS 45.0%
!! TCTGGCCTTGCCTTTGAAAT+AGG + chr3_3:79065791-79065810 Msa0475690:CDS 45.0%
TGATCTTGAGGCCACATTCA+TGG + chr3_3:79066197-79066216 Msa0475690:CDS 45.0%
!! CAAAAGTAGGGGTATTCGGT+CGG - chr3_3:79066462-79066481 None:intergenic 45.0%
!! CCGAATACCCCTACTTTTGA+TGG + chr3_3:79066463-79066482 Msa0475690:intron 45.0%
! CGGCGACACAAAGAAAGTAT+GGG - chr3_3:79066554-79066573 None:intergenic 45.0%
TCCCTAATCTTCTCACGTTC+TGG + chr3_3:79067265-79067284 Msa0475690:intron 45.0%
CTAACACAACCCCACAAAAC+CGG + chr3_3:79067507-79067526 Msa0475690:intron 45.0%
GTGTGTTAAGAGTCCCACAT+CGG - chr3_3:79067593-79067612 None:intergenic 45.0%
AACGGAAACCTGATAACAGG+TGG + chr3_3:79067654-79067673 Msa0475690:intron 45.0%
AACGGAAACCTGATAACAGG+TGG + chr3_3:79067654-79067673 Msa0475690:intron 45.0%
GAGCCTCTTCACGATTCTTT+GGG - chr3_3:79067713-79067732 None:intergenic 45.0%
AGAGCCTCTTCACGATTCTT+TGG - chr3_3:79067714-79067733 None:intergenic 45.0%
GAATTGGGTGAACAGTGACT+GGG - chr3_3:79068094-79068113 None:intergenic 45.0%
!! CATAGGTATGGAGAGGTGTT+GGG - chr3_3:79068255-79068274 None:intergenic 45.0%
! TCATAGGTATGGAGAGGTGT+TGG - chr3_3:79068256-79068275 None:intergenic 45.0%
TAAGAGAATCCAGTACCCAC+AGG - chr3_3:79068439-79068458 None:intergenic 45.0%
! TGAGCAGCACTTTCCGTTTT+GGG - chr3_3:79068463-79068482 None:intergenic 45.0%
GAACGATAATTGGGACAGGA+AGG - chr3_3:79068711-79068730 None:intergenic 45.0%
GGTATCATGCTCACAATGAC+CGG + chr3_3:79068745-79068764 Msa0475690:intron 45.0%
TCCTTTCTTGCAGGAAACGA+AGG + chr3_3:79069046-79069065 Msa0475690:intron 45.0%
ACCTTCGTTTCCTGCAAGAA+AGG - chr3_3:79069050-79069069 None:intergenic 45.0%
TTTCTTGCAGGAAACGAAGG+TGG + chr3_3:79069049-79069068 Msa0475690:intron 45.0%
CGAACCTGAAGGTTTATCCA+TGG - chr3_3:79069082-79069101 None:intergenic 45.0%
CGCATCATTCTTTGCCATCT+TGG + chr3_3:79069100-79069119 Msa0475690:intron 45.0%
TCTTTGCCATCTTGGAACTG+AGG + chr3_3:79069108-79069127 Msa0475690:intron 45.0%
! CTGTCATTTCTCTGCGTTTC+TGG - chr3_3:79069651-79069670 None:intergenic 45.0%
! CTGTCATTTCTCTGCGTTTC+TGG + chr3_3:79069651-79069670 Msa0475690:intron 45.0%
TGCTTCATCCAGCGATTTAG+AGG - chr3_3:79069949-79069968 None:intergenic 45.0%
TTGCTTGTGATTGAGGACAG+GGG - chr3_3:79070014-79070033 None:intergenic 45.0%
GTTTGCTTGTGATTGAGGAC+AGG - chr3_3:79070016-79070035 None:intergenic 45.0%
GCAAAGGCTAAGGATGTCAA+TGG + chr3_3:79070564-79070583 Msa0475690:intron 45.0%
AGGATGTCAATGGATACCCA+TGG + chr3_3:79070574-79070593 Msa0475690:intron 45.0%
GGATGTCAATGGATACCCAT+GGG + chr3_3:79070575-79070594 Msa0475690:intron 45.0%
TCAATGGATACCCATGGGTA+CGG + chr3_3:79070580-79070599 Msa0475690:intron 45.0%
ATCATACTTATCCAACGGGG+CGG - chr3_3:79070624-79070643 None:intergenic 45.0%
ATGGATACCTCAATACCCAC+GGG - chr3_3:79070692-79070711 None:intergenic 45.0%
CATGGATACCTCAATACCCA+CGG - chr3_3:79070693-79070712 None:intergenic 45.0%
!! GTGGGTATTGAGGTATCCAT+GGG + chr3_3:79070692-79070711 Msa0475690:intron 45.0%
ATCTGGACACAGACACAGAT+TGG - chr3_3:79071095-79071114 None:intergenic 45.0%
GCAAAAATACTCATGCCCAC+GGG - chr3_3:79071209-79071228 None:intergenic 45.0%
GGCAAAAATACTCATGCCCA+CGG - chr3_3:79071210-79071229 None:intergenic 45.0%
! ATTTTTGCCACCCCTAGCAA+AGG + chr3_3:79071221-79071240 Msa0475690:intron 45.0%
! GTGATGCATGGTTTAAGGCA+TGG + chr3_3:79071603-79071622 Msa0475690:intron 45.0%
! GATGCATGGTTTAAGGCATG+GGG + chr3_3:79071605-79071624 Msa0475690:intron 45.0%
ATTGCCGTTGTGGGAGATTA+AGG - chr3_3:79072784-79072803 None:intergenic 45.0%
TGCTTCTACATTGCCGTTGT+GGG - chr3_3:79072793-79072812 None:intergenic 45.0%
TTGCTTCTACATTGCCGTTG+TGG - chr3_3:79072794-79072813 None:intergenic 45.0%
TACCAAAATGCCCCTCATAG+GGG + chr3_3:79072985-79073004 Msa0475690:intron 45.0%
TACCAATTTGCCCCTATGAG+GGG - chr3_3:79072998-79073017 None:intergenic 45.0%
GTTGTGAGCTAGCGATGTTA+AGG - chr3_3:79073378-79073397 None:intergenic 45.0%
AGATATCCAGTCCTATCGAG+AGG + chr3_3:79073650-79073669 Msa0475690:CDS 45.0%
AAAAAGGCTCACCTCTCGAT+AGG - chr3_3:79073664-79073683 None:intergenic 45.0%
!! CGTTGCCTTTTAAAAGCTCC+AGG + chr3_3:79074070-79074089 Msa0475690:intron 45.0%
! GACACCCTGGAGCTTTTAAA+AGG - chr3_3:79074078-79074097 None:intergenic 45.0%
!! AACGTAACGTTTTGACACCC+TGG - chr3_3:79074091-79074110 None:intergenic 45.0%
!! AACGTAGCGTTTTGACACTC+TGG + chr3_3:79074230-79074249 Msa0475690:intron 45.0%
TAGCCTGTTTGGTATAGTGG+TGG + chr3_3:79075455-79075474 Msa0475690:intron 45.0%
AGCCTGTTTGGTATAGTGGT+GGG + chr3_3:79075456-79075475 Msa0475690:intron 45.0%
! TTTTGCCAAAACGTGGGTAC+AGG + chr3_3:79075541-79075560 Msa0475690:intron 45.0%
! GTTTGGTTCGCCTAATCCAA+TGG + chr3_3:79076039-79076058 Msa0475690:CDS 45.0%
CTCCTATCATTGGGTTCCAT+TGG - chr3_3:79076058-79076077 None:intergenic 45.0%
CAATGGAACCCAATGATAGG+AGG + chr3_3:79076056-79076075 Msa0475690:CDS 45.0%
CATTGCCACCTTTAAACTGC+CGG + chr3_3:79076125-79076144 Msa0475690:CDS 45.0%
ATTGCCACCTTTAAACTGCC+GGG + chr3_3:79076126-79076145 Msa0475690:CDS 45.0%
GAAGTTACCCGGCAGTTTAA+AGG - chr3_3:79076136-79076155 None:intergenic 45.0%
AGGTAGAGGTCAAGATAGCA+GGG - chr3_3:79076311-79076330 None:intergenic 45.0%
AAGGTAGAGGTCAAGATAGC+AGG - chr3_3:79076312-79076331 None:intergenic 45.0%
CTTGACCTCTACCTTTCCAA+TGG + chr3_3:79076317-79076336 Msa0475690:intron 45.0%
GATAGTCAAAGTTGAGCGAG+AGG + chr3_3:79076445-79076464 Msa0475690:intron 45.0%
ATTACTCCGGTACACCGAAA+AGG + chr3_3:79077015-79077034 Msa0475690:intron 45.0%
AAGTCTAGTGCGAACTCTCA+TGG - chr3_3:79077132-79077151 None:intergenic 45.0%
! CAGTGATGTGGTCTTGAGTT+TGG + chr3_3:79077176-79077195 Msa0475690:intron 45.0%
ATGATGTGTCGAGGTAGTGA+TGG - chr3_3:79078385-79078404 None:intergenic 45.0%
TTTCGTTGTCCGGCATACAT+CGG - chr3_3:79078518-79078537 None:intergenic 45.0%
! CACGCTTGAGTTGCCAAAAA+TGG - chr3_3:79078674-79078693 None:intergenic 45.0%
!!! CATTTTTGGCAACTCAAGCG+TGG + chr3_3:79078672-79078691 Msa0475690:CDS 45.0%
!! ATATATAATTTAATATGTTA+AGG - chr3_3:79067365-79067384 None:intergenic 5.0%
!!! TTTTGAATTTATTTATTTTT+TGG + chr3_3:79070726-79070745 Msa0475690:intron 5.0%
!! TAATTTACTTAATTTATTAT+CGG + chr3_3:79071040-79071059 Msa0475690:intron 5.0%
!!! GTTTTTAAAAATATAAAAAT+TGG + chr3_3:79072149-79072168 Msa0475690:intron 5.0%
!! AAAAAAAAAATAAAGTTAAA+TGG + chr3_3:79072494-79072513 Msa0475690:intron 5.0%
!! ATAGTTAAAAATATAAAAAT+TGG + chr3_3:79072841-79072860 Msa0475690:intron 5.0%
!! AAGAAAATAATTAAAAAAAT+TGG + chr3_3:79072897-79072916 Msa0475690:intron 5.0%
!! TTAAAAAAAAATGATTAAAT+AGG - chr3_3:79076616-79076635 None:intergenic 5.0%
!! TAAAATAAAACATAAAAATT+TGG - chr3_3:79076804-79076823 None:intergenic 5.0%
!!! AACTAAAATAATATTTTTAA+AGG - chr3_3:79077566-79077585 None:intergenic 5.0%
!!! TTTTATATTTGTTATATTTT+TGG + chr3_3:79077779-79077798 Msa0475690:intron 5.0%
!! TCATAATTAATAAATAATAT+AGG + chr3_3:79079132-79079151 Msa0475690:three_prime_UTR 5.0%
AACAGGGAAGAGAAGTGGTG+TGG + chr3_3:79065396-79065415 Msa0475690:five_prime_UTR 50.0%
AGGACCCCTTCCCTTTATAC+TGG + chr3_3:79065625-79065644 Msa0475690:CDS 50.0%
CCTCTCTTGCCTTGGTTAAC+CGG + chr3_3:79065746-79065765 Msa0475690:CDS 50.0%
!! ATTGATGGCGGTGTTGTTGC+AGG + chr3_3:79066127-79066146 Msa0475690:intron 50.0%
GAGGCCACATTCATGGACAA+AGG + chr3_3:79066204-79066223 Msa0475690:CDS 50.0%
CGCCAAAGATCCACTCTTGT+AGG + chr3_3:79066415-79066434 Msa0475690:intron 50.0%
TGGGAGACTTCCTACAAGAG+TGG - chr3_3:79066428-79066447 None:intergenic 50.0%
TAGAATAGTCCCAACAGGGG+CGG + chr3_3:79066488-79066507 Msa0475690:intron 50.0%
! ATTTACCACCCAGCTAGCCT+GGG + chr3_3:79066511-79066530 Msa0475690:intron 50.0%
! AAGAAAGTATGGGTCGAGCC+CGG - chr3_3:79066544-79066563 None:intergenic 50.0%
GCGGCGACACAAAGAAAGTA+TGG - chr3_3:79066555-79066574 None:intergenic 50.0%
!! CACAAGCTGATTCGTCCTAG+CGG + chr3_3:79066628-79066647 Msa0475690:intron 50.0%
!! TTTGAGTTCTGGGTGTCGCT+GGG - chr3_3:79066726-79066745 None:intergenic 50.0%
!! ATTTGAGTTCTGGGTGTCGC+TGG - chr3_3:79066727-79066746 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - chr3_3:79067509-79067528 None:intergenic 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG - chr3_3:79067520-79067539 None:intergenic 50.0%
AGGCCAACTTCTAACCGATG+TGG + chr3_3:79067576-79067595 Msa0475690:intron 50.0%
GGCCAACTTCTAACCGATGT+GGG + chr3_3:79067577-79067596 Msa0475690:intron 50.0%
! GTCCCACATCGGTTAGAAGT+TGG - chr3_3:79067582-79067601 None:intergenic 50.0%
ATGTGCAATCCTGAGCGTGA+GGG - chr3_3:79067617-79067636 None:intergenic 50.0%
! AGGATTGCACATCTGAAGCG+TGG + chr3_3:79067625-79067644 Msa0475690:intron 50.0%
ACAGGTGGCCCAAAGGATAA+CGG + chr3_3:79067669-79067688 Msa0475690:intron 50.0%
TCTTTGGGCCACCTGTTATC+AGG - chr3_3:79067698-79067717 None:intergenic 50.0%
TGGCCCAAAGAATCGTGAAG+AGG + chr3_3:79067707-79067726 Msa0475690:intron 50.0%
! CCAGGAATTTTGTCGAGCCT+GGG - chr3_3:79067831-79067850 None:intergenic 50.0%
!! GAAAGCACTCGGGAATGTCT+GGG - chr3_3:79067867-79067886 None:intergenic 50.0%
!! TGAAAGCACTCGGGAATGTC+TGG - chr3_3:79067868-79067887 None:intergenic 50.0%
AAATCCATAGGCGGGGTTCT+TGG - chr3_3:79067949-79067968 None:intergenic 50.0%
AAGAACCCCGCCTATGGATT+TGG + chr3_3:79067948-79067967 Msa0475690:intron 50.0%
TACACGGCTGCCAAATCCAT+AGG - chr3_3:79067961-79067980 None:intergenic 50.0%
GCACATCAGCTCTTGATCTG+AGG - chr3_3:79068029-79068048 None:intergenic 50.0%
GGAATTGGGTGAACAGTGAC+TGG - chr3_3:79068095-79068114 None:intergenic 50.0%
CAAAAGTCGCGACGAATGCA+GGG - chr3_3:79068116-79068135 None:intergenic 50.0%
ACAAAAGTCGCGACGAATGC+AGG - chr3_3:79068117-79068136 None:intergenic 50.0%
TTGGATTTGCCTGTGGGTAC+TGG + chr3_3:79068427-79068446 Msa0475690:CDS 50.0%
! CTGAGCAGCACTTTCCGTTT+TGG - chr3_3:79068464-79068483 None:intergenic 50.0%
ATTGCTGGTGACTCGTACTC+AGG + chr3_3:79068685-79068704 Msa0475690:CDS 50.0%
CATGGTTGAACATAGGGGGT+AGG + chr3_3:79069621-79069640 Msa0475690:intron 50.0%
CGTGAGCTGATCAAAATGCG+AGG + chr3_3:79069762-79069781 Msa0475690:intron 50.0%
ATCGCTGGATGAAGCATGAG+AGG + chr3_3:79069953-79069972 Msa0475690:intron 50.0%
TCGCTGGATGAAGCATGAGA+GGG + chr3_3:79069954-79069973 Msa0475690:intron 50.0%
TGGATGAAGCATGAGAGGGA+TGG + chr3_3:79069958-79069977 Msa0475690:intron 50.0%
TGCTTGTGATTGAGGACAGG+GGG - chr3_3:79070013-79070032 None:intergenic 50.0%
TTACAAACCCGTGCTTCGCA+CGG + chr3_3:79070087-79070106 Msa0475690:intron 50.0%
TCATACTTATCCAACGGGGC+GGG - chr3_3:79070623-79070642 None:intergenic 50.0%
AGTGAGTACCCACGAGGATA+CGG - chr3_3:79070660-79070679 None:intergenic 50.0%
CCTCGTGGGTACTCACTATA+CGG + chr3_3:79070663-79070682 Msa0475690:intron 50.0%
CTCGTGGGTACTCACTATAC+GGG + chr3_3:79070664-79070683 Msa0475690:intron 50.0%
!! CGTGGGTATTGAGGTATCCA+TGG + chr3_3:79070691-79070710 Msa0475690:intron 50.0%
CAAAACTCCATGGGTACCCA+TGG - chr3_3:79070711-79070730 None:intergenic 50.0%
TATCGGGTATGGGTACCCAT+AGG + chr3_3:79071057-79071076 Msa0475690:intron 50.0%
GGTATGGGTACCCATAGGTA+TGG + chr3_3:79071062-79071081 Msa0475690:intron 50.0%
GTAGCTAAACTGGCATCCAC+GGG - chr3_3:79071150-79071169 None:intergenic 50.0%
GGTAGCTAAACTGGCATCCA+CGG - chr3_3:79071151-79071170 None:intergenic 50.0%
TATGGAGCGGGTAGCTAAAC+TGG - chr3_3:79071160-79071179 None:intergenic 50.0%
GGTAAAATCCGTCACGGGTA+TGG - chr3_3:79071178-79071197 None:intergenic 50.0%
ATATCTGCCTTTGCTAGGGG+TGG - chr3_3:79071231-79071250 None:intergenic 50.0%
! TTCCGGCGTGAGTTGAAAAG+AGG + chr3_3:79072564-79072583 Msa0475690:intron 50.0%
! CACCTCTTTTCAACTCACGC+CGG - chr3_3:79072569-79072588 None:intergenic 50.0%
CTCCCACCACTATACCAAAC+AGG - chr3_3:79075461-79075480 None:intergenic 50.0%
!! GATGGGTTAGCATTGGGAAG+TGG - chr3_3:79075492-79075511 None:intergenic 50.0%
! GTTTGTTACAGCGGTGGAAG+AGG - chr3_3:79075567-79075586 None:intergenic 50.0%
! GCTTCTGTTTGTTACAGCGG+TGG - chr3_3:79075573-79075592 None:intergenic 50.0%
CAATAGGCACTAGCCCACTT+AGG - chr3_3:79075960-79075979 None:intergenic 50.0%
TTGGAACCGAGTTGCGAGTT+TGG + chr3_3:79076022-79076041 Msa0475690:CDS 50.0%
GTTACCCGGCAGTTTAAAGG+TGG - chr3_3:79076133-79076152 None:intergenic 50.0%
GGTAGAGGTCAAGATAGCAG+GGG - chr3_3:79076310-79076329 None:intergenic 50.0%
!! GTGAGACCTTTTCGGTGTAC+CGG - chr3_3:79077024-79077043 None:intergenic 50.0%
ATTAGCGTCGTTGGCCCAAT+AGG - chr3_3:79078019-79078038 None:intergenic 50.0%
CTGCCTCCAATCGTCAACAA+TGG - chr3_3:79078717-79078736 None:intergenic 50.0%
TTGTTGACGATTGGAGGCAG+TGG + chr3_3:79078717-79078736 Msa0475690:CDS 50.0%
GCTTAGCCATGTTCAGTAGG+TGG + chr3_3:79079038-79079057 Msa0475690:CDS 50.0%
GGAAGGGGTCCTTGAAAACC+AGG - chr3_3:79065617-79065636 None:intergenic 55.0%
GAAACTGGGTACGTGGGAGT+GGG + chr3_3:79065647-79065666 Msa0475690:CDS 55.0%
CCGGTTAACCAAGGCAAGAG+AGG - chr3_3:79065749-79065768 None:intergenic 55.0%
CTCTTGCCTTGGTTAACCGG+TGG + chr3_3:79065749-79065768 Msa0475690:CDS 55.0%
CCAGAGAAAGCAGAGCAACC+AGG - chr3_3:79065776-79065795 None:intergenic 55.0%
CCTGGTTGCTCTGCTTTCTC+TGG + chr3_3:79065773-79065792 Msa0475690:CDS 55.0%
TCGGTCGGAGATCGTTGCAT+GGG - chr3_3:79066447-79066466 None:intergenic 55.0%
TTCGGTCGGAGATCGTTGCA+TGG - chr3_3:79066448-79066467 None:intergenic 55.0%
GTGGTAAATCCGCCCCTGTT+GGG - chr3_3:79066500-79066519 None:intergenic 55.0%
GATTTACCACCCAGCTAGCC+TGG + chr3_3:79066510-79066529 Msa0475690:intron 55.0%
! AGAAAGTATGGGTCGAGCCC+GGG - chr3_3:79066543-79066562 None:intergenic 55.0%
GCGCGAGCTTTGCATTGCTT+AGG + chr3_3:79066656-79066675 Msa0475690:intron 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG - chr3_3:79067519-79067538 None:intergenic 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG - chr3_3:79067521-79067540 None:intergenic 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + chr3_3:79067521-79067540 Msa0475690:intron 55.0%
GCAATCCTCACCTCACAAGC+CGG - chr3_3:79067529-79067548 None:intergenic 55.0%
TGTGCAATCCTGAGCGTGAG+GGG - chr3_3:79067616-79067635 None:intergenic 55.0%
GATGTGCAATCCTGAGCGTG+AGG - chr3_3:79067618-79067637 None:intergenic 55.0%
! TCTGAAGCGTGGCCCGATAA+CGG + chr3_3:79067636-79067655 Msa0475690:intron 55.0%
CCTTTGGGCCACCTGTTATC+AGG - chr3_3:79067665-79067684 None:intergenic 55.0%
CCTGATAACAGGTGGCCCAA+AGG + chr3_3:79067662-79067681 Msa0475690:intron 55.0%
CGTGGTTGTGGGGTTGTGTT+AGG - chr3_3:79067764-79067783 None:intergenic 55.0%
CCCAGGCTCGACAAAATTCC+TGG + chr3_3:79067828-79067847 Msa0475690:intron 55.0%
! GCCAGGAATTTTGTCGAGCC+TGG - chr3_3:79067832-79067851 None:intergenic 55.0%
AAAATTCCTGGCTCCGCCAC+TGG + chr3_3:79067840-79067859 Msa0475690:intron 55.0%
ACGGCTGCCAAATCCATAGG+CGG - chr3_3:79067958-79067977 None:intergenic 55.0%
GCATTGCGTCTGCAGCATCT+CGG - chr3_3:79067994-79068013 None:intergenic 55.0%
CGCGACGAATGCAGGGAATT+GGG - chr3_3:79068109-79068128 None:intergenic 55.0%
TCGCGACGAATGCAGGGAAT+TGG - chr3_3:79068110-79068129 None:intergenic 55.0%
! GTGCTGCTCAGCAAAGCACT+TGG + chr3_3:79068473-79068492 Msa0475690:CDS 55.0%
ACGAAGGTGGCCTTCAACCA+TGG + chr3_3:79069062-79069081 Msa0475690:CDS 55.0%
TACAAACCCGTGCTTCGCAC+GGG + chr3_3:79070088-79070107 Msa0475690:intron 55.0%
CATACTTATCCAACGGGGCG+GGG - chr3_3:79070622-79070641 None:intergenic 55.0%
TGAGTACCCACGAGGATACG+GGG - chr3_3:79070658-79070677 None:intergenic 55.0%
GTGAGTACCCACGAGGATAC+GGG - chr3_3:79070659-79070678 None:intergenic 55.0%
CCGTATAGTGAGTACCCACG+AGG - chr3_3:79070666-79070685 None:intergenic 55.0%
ACTCACTATACGGGTACCCG+TGG + chr3_3:79070673-79070692 Msa0475690:intron 55.0%
CTCACTATACGGGTACCCGT+GGG + chr3_3:79070674-79070693 Msa0475690:intron 55.0%
! GAGGTATCCATGGGTACCCA+TGG + chr3_3:79070701-79070720 Msa0475690:intron 55.0%
AATCCGTCACGGGTATGGAG+CGG - chr3_3:79071173-79071192 None:intergenic 55.0%
CCGTGGGTAAAATCCGTCAC+GGG - chr3_3:79071183-79071202 None:intergenic 55.0%
!!! CCCGTGACGGATTTTACCCA+CGG + chr3_3:79071180-79071199 Msa0475690:intron 55.0%
CCCGTGGGTAAAATCCGTCA+CGG - chr3_3:79071184-79071203 None:intergenic 55.0%
!!! CCGTGACGGATTTTACCCAC+GGG + chr3_3:79071181-79071200 Msa0475690:intron 55.0%
! ATTTTACCCACGGGTACCCG+TGG + chr3_3:79071190-79071209 Msa0475690:intron 55.0%
! TTTTACCCACGGGTACCCGT+GGG + chr3_3:79071191-79071210 Msa0475690:intron 55.0%
!!! TGCCCCTATGAGGGGCATTT+TGG - chr3_3:79072990-79073009 None:intergenic 55.0%
TGCCCCTCATAGGGGCAAAT+TGG + chr3_3:79072993-79073012 Msa0475690:intron 55.0%
! AGAGGCCTGTACCCACGTTT+TGG - chr3_3:79075549-79075568 None:intergenic 55.0%
GGCGAACCAAACTCGCAACT+CGG - chr3_3:79076031-79076050 None:intergenic 55.0%
CGTTGGCCCAATAGGAACAG+AGG - chr3_3:79078011-79078030 None:intergenic 55.0%
GGAAACTGGGTACGTGGGAG+TGG + chr3_3:79065646-79065665 Msa0475690:CDS 60.0%
! CCAGGACCACCGGTTAACCA+AGG - chr3_3:79065758-79065777 None:intergenic 60.0%
CCTTGGTTAACCGGTGGTCC+TGG + chr3_3:79065755-79065774 Msa0475690:CDS 60.0%
AGCAGAGCAACCAGGACCAC+CGG - chr3_3:79065768-79065787 None:intergenic 60.0%
GGTGGTAAATCCGCCCCTGT+TGG - chr3_3:79066501-79066520 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG + chr3_3:79067516-79067535 Msa0475690:intron 60.0%
TAACACACCCCCTCACGCTC+AGG + chr3_3:79067605-79067624 Msa0475690:intron 60.0%
GTGCAATCCTGAGCGTGAGG+GGG - chr3_3:79067615-79067634 None:intergenic 60.0%
! GGAATGTCTGGGACCAGTGG+CGG - chr3_3:79067856-79067875 None:intergenic 60.0%
! TCGGGAATGTCTGGGACCAG+TGG - chr3_3:79067859-79067878 None:intergenic 60.0%
CTCACCAAGAACCCCGCCTA+TGG + chr3_3:79067942-79067961 Msa0475690:intron 60.0%
GGCTGCCAAATCCATAGGCG+GGG - chr3_3:79067956-79067975 None:intergenic 60.0%
CGGCTGCCAAATCCATAGGC+GGG - chr3_3:79067957-79067976 None:intergenic 60.0%
GCTGCAGACGCAATGCTGAC+AGG + chr3_3:79067998-79068017 Msa0475690:intron 60.0%
ACAAACCCGTGCTTCGCACG+GGG + chr3_3:79070089-79070108 Msa0475690:intron 60.0%
! ACGGGTACCCGTGGGTATTG+AGG + chr3_3:79070682-79070701 Msa0475690:intron 60.0%
TACCCGCTCCATACCCGTGA+CGG + chr3_3:79071167-79071186 Msa0475690:intron 60.0%
ATCCGTCACGGGTATGGAGC+GGG - chr3_3:79071172-79071191 None:intergenic 60.0%
GGCTCACCTCTCGATAGGAC+TGG - chr3_3:79073659-79073678 None:intergenic 60.0%
AAGCTCGCGCTTCTGCCGCT+AGG - chr3_3:79066646-79066665 None:intergenic 65.0%
CAAACCCGTGCTTCGCACGG+GGG + chr3_3:79070090-79070109 Msa0475690:intron 65.0%
TGAACCCCCGTGCGAAGCAC+GGG - chr3_3:79070097-79070116 None:intergenic 65.0%
CTGAACCCCCGTGCGAAGCA+CGG - chr3_3:79070098-79070117 None:intergenic 65.0%
TTATCCAACGGGGCGGGGAC+AGG - chr3_3:79070617-79070636 None:intergenic 65.0%
TACCCACGAGGATACGGGGC+GGG - chr3_3:79070654-79070673 None:intergenic 65.0%
GTACCCACGAGGATACGGGG+CGG - chr3_3:79070655-79070674 None:intergenic 65.0%
TCATGCCCACGGGTACCCGT+GGG - chr3_3:79071199-79071218 None:intergenic 65.0%
GATACCTGTCCCCGCCCCGT+TGG + chr3_3:79070610-79070629 Msa0475690:intron 70.0%
ACGAGGATACGGGGCGGGCA+CGG - chr3_3:79070649-79070668 None:intergenic 70.0%
TGCCCGCCCCGTATCCTCGT+GGG + chr3_3:79070649-79070668 Msa0475690:intron 70.0%
CTCATGCCCACGGGTACCCG+TGG - chr3_3:79071200-79071219 None:intergenic 70.0%
! GCGTGCCCAGGCTAGCTGGG+TGG - chr3_3:79066519-79066538 None:intergenic 75.0%
! GGCGCGTGCCCAGGCTAGCT+GGG - chr3_3:79066522-79066541 None:intergenic 75.0%
! AGCTAGCCTGGGCACGCGCC+CGG + chr3_3:79066522-79066541 Msa0475690:intron 75.0%
! CTGGGACCAGTGGCGGAGCC+AGG - chr3_3:79067849-79067868 None:intergenic 75.0%
CGAGGATACGGGGCGGGCAC+GGG - chr3_3:79070648-79070667 None:intergenic 75.0%
GTGCCCGCCCCGTATCCTCG+TGG + chr3_3:79070648-79070667 Msa0475690:intron 75.0%
! GGGCGCGTGCCCAGGCTAGC+TGG - chr3_3:79066523-79066542 None:intergenic 80.0%
!! GCTAGCCTGGGCACGCGCCC+GGG + chr3_3:79066523-79066542 Msa0475690:intron 80.0%
! TCGAGCCCGGGCGCGTGCCC+AGG - chr3_3:79066531-79066550 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 79065309 79079373 79065309 ID=Msa0475690;Name=Msa0475690
chr3_3 mRNA 79065309 79079373 79065309 ID=Msa0475690-mRNA-1;Parent=Msa0475690;Name=Msa0475690-mRNA-1;_AED=0.38;_eAED=0.38;_QI=134|0.91|0.84|1|0.83|0.92|13|292|483
chr3_3 exon 79065309 79065812 79065309 ID=Msa0475690-mRNA-1:exon:21443;Parent=Msa0475690-mRNA-1
chr3_3 exon 79066149 79066225 79066149 ID=Msa0475690-mRNA-1:exon:21444;Parent=Msa0475690-mRNA-1
chr3_3 exon 79068409 79068531 79068409 ID=Msa0475690-mRNA-1:exon:21445;Parent=Msa0475690-mRNA-1
chr3_3 exon 79068643 79068745 79068643 ID=Msa0475690-mRNA-1:exon:21446;Parent=Msa0475690-mRNA-1
chr3_3 exon 79069059 79069096 79069059 ID=Msa0475690-mRNA-1:exon:21447;Parent=Msa0475690-mRNA-1
chr3_3 exon 79073356 79073457 79073356 ID=Msa0475690-mRNA-1:exon:21448;Parent=Msa0475690-mRNA-1
chr3_3 exon 79073585 79073671 79073585 ID=Msa0475690-mRNA-1:exon:21449;Parent=Msa0475690-mRNA-1
chr3_3 exon 79075992 79076147 79075992 ID=Msa0475690-mRNA-1:exon:21450;Parent=Msa0475690-mRNA-1
chr3_3 exon 79077994 79078065 79077994 ID=Msa0475690-mRNA-1:exon:21451;Parent=Msa0475690-mRNA-1
chr3_3 exon 79078186 79078263 79078186 ID=Msa0475690-mRNA-1:exon:21452;Parent=Msa0475690-mRNA-1
chr3_3 exon 79078647 79078762 79078647 ID=Msa0475690-mRNA-1:exon:21453;Parent=Msa0475690-mRNA-1
chr3_3 exon 79078853 79078898 79078853 ID=Msa0475690-mRNA-1:exon:21454;Parent=Msa0475690-mRNA-1
chr3_3 exon 79078998 79079373 79078998 ID=Msa0475690-mRNA-1:exon:21455;Parent=Msa0475690-mRNA-1
chr3_3 five_prime_UTR 79065309 79065442 79065309 ID=Msa0475690-mRNA-1:five_prime_utr;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79065443 79065812 79065443 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79066149 79066225 79066149 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79068409 79068531 79068409 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79068643 79068745 79068643 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79069059 79069096 79069059 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79073356 79073457 79073356 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79073585 79073671 79073585 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79075992 79076147 79075992 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79077994 79078065 79077994 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79078186 79078263 79078186 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79078647 79078762 79078647 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79078853 79078898 79078853 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 CDS 79078998 79079081 79078998 ID=Msa0475690-mRNA-1:cds;Parent=Msa0475690-mRNA-1
chr3_3 three_prime_UTR 79079082 79079373 79079082 ID=Msa0475690-mRNA-1:three_prime_utr;Parent=Msa0475690-mRNA-1
Gene Sequence

>Msa0475690

ATGGCAATGCTTAGGCTTAGTTCACATCACAGTGGTAACATTATTATTATTATTATTACTAGAACCTTGTTTAAGATGATTATAATATTTGTTATAGCATTCCTATTGTTACAAAATTCATCCACCAACCTTGTTTTTGCAACATCTCAATCCAATATTGTCAAGTATCTTCCTGGTTTTCAAGGACCCCTTCCCTTTATACTGGAAACTGGGTACGTGGGAGTGGGTGAAACTGAAACAGATGAAAATGCCACGGAATTGTTCTACTATTTTATAGAGTCTGAGAATAATCCTAAAGAAGATCCTCTCTTGCCTTGGTTAACCGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGCCTTTGAAATAGGTCCAATAACATTTAAAAATGAGGAATACAACGGGAGCTTACCAAATTTGATCTTGAGGCCACATTCATGGACAAAGGTAAGTAATATCATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACGGAAAGTGCTGCTCAGCAAAGCACTTGGAAGCTAGTTCACAATTCTCATCAATTTCTTAGGAAGTGGCTCATTGATCATCCAAAATTTATCTCAAATAAAGTGTACATTGCTGGTGACTCGTACTCAGGCCTTCCTGTCCCAATTATCGTTCAAGAAATTTCATATGGAAACGAAGGTGGCCTTCAACCATGGATAAACCTTCAGGGATACATACTAGGAAATCCCTTAACATCGCTAGCTCACAACGATAATTACAAGATACCATTTAATCATGGCATGGGACTTATTTCTGATGAACTCTACGAGTCACTGCAAAAGAATTGTCGAGGCGAGTATACAAATGTAGATCCCCAAAATGTATTTTGTCTAGAAGATATCCAGTCCTATCGAGAGACTATTTCAGGACTTAATCAAGCTCATATTTTGGAACCGAGTTGCGAGTTTGGTTCGCCTAATCCAATGGAACCCAATGATAGGAGGAGACTTCTTATTCACAAGGCCAACACTATTTTTACTTCTTCTCTTACATTGCCACCTTTAAACTGCCGGAATCATGCATATTTCCTCTGTTCCTATTGGGCCAACGACGCTAATGTTCAAAATGCACTGCACATTCGAAAGGGAACTACAGGAAAATGGAAGCGTTGTAACTTTGACATACCTTTCAAGCACGAAATAGATAGCAGCTTTGAGTATCATTGTGGAGATCATGACATGACTGTTCCATTTTTGGCAACTCAAGCGTGGATAAGATCTTTAAACTATTCCATTGTTGACGATTGGAGGCAGTGGTATTCTAATTCTCAAGTAGCAGGATACACAAGGACTTACTCGAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACTGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG
Protein sequence

>Msa0475690

MAMLRLSSHHSGNIIIIIITRTLFKMIIIFVIAFLLLQNSSTNLVFATSQSNIVKYLPGFQGPLPFILETGYVGVGETETDENATELFYYFIESENNPKEDPLLPWLTGGPGCSAFSGLAFEIGPITFKNEEYNGSLPNLILRPHSWTKVSNIIFLDLPVGTGFSYPKTESAAQQSTWKLVHNSHQFLRKWLIDHPKFISNKVYIAGDSYSGLPVPIIVQEISYGNEGGLQPWINLQGYILGNPLTSLAHNDNYKIPFNHGMGLISDELYESLQKNCRGEYTNVDPQNVFCLEDIQSYRETISGLNQAHILEPSCEFGSPNPMEPNDRRRLLIHKANTIFTSSLTLPPLNCRNHAYFLCSYWANDANVQNALHIRKGTTGKWKRCNFDIPFKHEIDSSFEYHCGDHDMTVPFLATQAWIRSLNYSIVDDWRQWYSNSQVAGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*