Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369730 | XP_024625718.1 | 76.100 | 1000 | 233 | 1 | 1 | 994 | 590 | 1589 | 0.0 | 1634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369730 | sp|Q9H611|PIF1_HUMAN | 25.586 | 469 | 251 | 19 | 519 | 970 | 207 | 594 | 1.28e-23 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369730 | A0A2Z6NP54 | 66.400 | 1000 | 329 | 3 | 1 | 994 | 522 | 1520 | 0.0 | 1407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016580 | Msa0369730 | 0.816449 | 5.499028e-52 | -8.615850e-47 |
| Msa0110270 | Msa0369730 | 0.802012 | 6.865970e-49 | -8.615850e-47 |
| Msa0200000 | Msa0369730 | 0.856918 | 2.324186e-62 | -8.615850e-47 |
| Msa0227480 | Msa0369730 | 0.802372 | 5.789751e-49 | -8.615850e-47 |
| Msa0369730 | Msa0414420 | 0.809245 | 2.080998e-50 | -8.615850e-47 |
| Msa0369730 | Msa0435230 | 0.824282 | 8.784855e-54 | -8.615850e-47 |
| Msa0369730 | Msa0450000 | 0.811606 | 6.436467e-51 | -8.615850e-47 |
| Msa0369730 | Msa0452900 | 0.823891 | 1.085252e-53 | -8.615850e-47 |
| Msa0369730 | Msa0479340 | 0.810970 | 8.845989e-51 | -8.615850e-47 |
| Msa0369730 | Msa0491590 | 0.856747 | 2.609832e-62 | -8.615850e-47 |
| Msa0369730 | Msa0564890 | 0.806192 | 9.268361e-50 | -8.615850e-47 |
| Msa0369730 | Msa0726140 | 0.811960 | 5.391411e-51 | -8.615850e-47 |
| Msa0369730 | Msa0729800 | 0.843354 | 1.475298e-58 | -8.615850e-47 |
| Msa0369730 | Msa0733290 | 0.863089 | 3.191357e-64 | -8.615850e-47 |
| Msa0369730 | Msa0745060 | 0.801515 | 8.681710e-49 | -8.615850e-47 |
| Msa0369730 | Msa0783160 | 0.810825 | 9.505029e-51 | -8.615850e-47 |
| Msa0369730 | Msa0808010 | 0.835501 | 1.617431e-56 | -8.615850e-47 |
| Msa0369730 | Msa0808020 | 0.827698 | 1.355419e-54 | -8.615850e-47 |
| Msa0369730 | Msa0825860 | 0.809502 | 1.832844e-50 | -8.615850e-47 |
| Msa0369730 | Msa0846210 | 0.801569 | 8.464607e-49 | -8.615850e-47 |
| Msa0369730 | Msa0846350 | 0.816203 | 6.242055e-52 | -8.615850e-47 |
| Msa0369730 | Msa0848960 | 0.810644 | 1.040581e-50 | -8.615850e-47 |
| Msa0369730 | Msa0858980 | 0.813649 | 2.300595e-51 | -8.615850e-47 |
| Msa0369730 | Msa0865320 | 0.805374 | 1.376928e-49 | -8.615850e-47 |
| Msa0369730 | Msa0888370 | 0.852351 | 4.888287e-61 | -8.615850e-47 |
| Msa0369730 | Msa0899430 | 0.812594 | 3.920105e-51 | -8.615850e-47 |
| Msa0369730 | Msa0899450 | 0.805882 | 1.077200e-49 | -8.615850e-47 |
| Msa0369730 | Msa0958550 | 0.815394 | 9.457082e-52 | -8.615850e-47 |
| Msa0369730 | Msa1016280 | 0.841520 | 4.520395e-58 | -8.615850e-47 |
| Msa0369730 | Msa1025360 | 0.834667 | 2.624959e-56 | -8.615850e-47 |
| Msa0369730 | Msa1025370 | 0.838438 | 2.876307e-57 | -8.615850e-47 |
| Msa0369730 | Msa1044830 | 0.831942 | 1.254018e-55 | -8.615850e-47 |
| Msa0369730 | Msa1044840 | 0.837427 | 5.231997e-57 | -8.615850e-47 |
| Msa0369730 | Msa1065570 | 0.800725 | 1.259428e-48 | -8.615850e-47 |
| Msa0369730 | Msa1109440 | 0.805663 | 1.197241e-49 | -8.615850e-47 |
| Msa0369730 | Msa1121200 | 0.809034 | 2.309532e-50 | -8.615850e-47 |
| Msa0369730 | Msa1135740 | 0.803124 | 4.049347e-49 | -8.615850e-47 |
| Msa0369730 | Msa1187940 | 0.803372 | 3.597058e-49 | -8.615850e-47 |
| Msa0369730 | Msa1270240 | 0.803609 | 3.212094e-49 | -8.615850e-47 |
| Msa0369730 | Msa1270270 | 0.803540 | 3.320264e-49 | -8.615850e-47 |
| Msa0369730 | Msa1283330 | 0.822701 | 2.057859e-53 | -8.615850e-47 |
| Msa0369730 | Msa1285930 | 0.803134 | 4.030009e-49 | -8.615850e-47 |
| Msa0369730 | Msa1287800 | 0.809237 | 2.089505e-50 | -8.615850e-47 |
| Msa0369730 | Msa1287810 | 0.815667 | 8.220332e-52 | -8.615850e-47 |
| Msa0369730 | Msa1320300 | 0.819521 | 1.112151e-52 | -8.615850e-47 |
| Msa0369730 | Msa1340590 | 0.887770 | 1.065149e-72 | -8.615850e-47 |
| Msa0369730 | Msa1397580 | 0.893001 | 9.435405e-75 | -8.615850e-47 |
| Msa0369730 | Msa1404000 | 0.800485 | 1.409717e-48 | -8.615850e-47 |
| Msa0369730 | Msa1415310 | 0.808546 | 2.936742e-50 | -8.615850e-47 |
| Msa0369730 | Msa1422180 | 0.820370 | 7.109293e-53 | -8.615850e-47 |
| Msa0267000 | Msa0369730 | 0.823414 | 1.403120e-53 | -8.615850e-47 |
| Msa0267010 | Msa0369730 | 0.829605 | 4.687095e-55 | -8.615850e-47 |
| Msa0342240 | Msa0369730 | 0.813825 | 2.103608e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369730 | MtrunA17_Chr1g0206501 | 68.273 | 498 | 152 | 1 | 290 | 781 | 1 | 498 | 0.0 | 740 |
| Msa0369730 | MtrunA17_Chr3g0101871 | 52.372 | 506 | 234 | 2 | 5 | 504 | 596 | 1100 | 0.0 | 568 |
| Msa0369730 | MtrunA17_Chr3g0101861 | 53.978 | 465 | 213 | 1 | 531 | 994 | 1 | 465 | 1.24e-179 | 530 |
| Msa0369730 | MtrunA17_Chr1g0173691 | 66.038 | 371 | 120 | 1 | 630 | 994 | 1 | 371 | 2.25e-176 | 517 |
| Msa0369730 | MtrunA17_Chr7g0269651 | 70.029 | 347 | 95 | 3 | 1 | 341 | 643 | 986 | 1.98e-171 | 527 |
| Msa0369730 | MtrunA17_Chr1g0173681 | 66.272 | 338 | 110 | 2 | 151 | 485 | 2 | 338 | 1.13e-161 | 478 |
| Msa0369730 | MtrunA17_Chr7g0269671 | 68.072 | 332 | 99 | 2 | 630 | 954 | 1 | 332 | 1.21e-156 | 465 |
| Msa0369730 | MtrunA17_Chr7g0270391 | 48.403 | 407 | 205 | 1 | 47 | 448 | 1 | 407 | 1.90e-134 | 411 |
| Msa0369730 | MtrunA17_Chr7g0248821 | 82.234 | 197 | 35 | 0 | 798 | 994 | 1 | 197 | 1.20e-111 | 342 |
| Msa0369730 | MtrunA17_Chr1g0206511 | 79.798 | 198 | 40 | 0 | 797 | 994 | 1 | 198 | 2.33e-111 | 342 |
| Msa0369730 | MtrunA17_Chr3g0133361 | 53.608 | 291 | 134 | 1 | 705 | 994 | 3 | 293 | 2.13e-100 | 317 |
| Msa0369730 | MtrunA17_Chr7g0269661 | 60.699 | 229 | 89 | 1 | 379 | 607 | 1 | 228 | 9.68e-88 | 280 |
| Msa0369730 | MtrunA17_Chr6g0472831 | 52.590 | 251 | 119 | 0 | 702 | 952 | 1 | 251 | 6.18e-86 | 276 |
| Msa0369730 | MtrunA17_Chr3g0093501 | 50.202 | 247 | 111 | 2 | 3 | 249 | 35 | 269 | 2.43e-77 | 254 |
| Msa0369730 | MtrunA17_Chr3g0100401 | 70.866 | 127 | 37 | 0 | 797 | 923 | 1 | 127 | 2.60e-56 | 190 |
| Msa0369730 | MtrunA17_Chr1g0173671 | 71.654 | 127 | 36 | 0 | 1 | 127 | 633 | 759 | 3.63e-52 | 196 |
| Msa0369730 | MtrunA17_Chr4g0022121 | 85.366 | 82 | 12 | 0 | 448 | 529 | 42 | 123 | 1.98e-40 | 145 |
| Msa0369730 | MtrunA17_Chr3g0139511 | 72.727 | 77 | 17 | 2 | 920 | 994 | 106 | 180 | 5.00e-29 | 114 |
| Msa0369730 | MtrunA17_Chr3g0129801 | 73.585 | 53 | 14 | 0 | 897 | 949 | 7 | 59 | 6.37e-20 | 84.7 |
| Msa0369730 | MtrunA17_Chr4g0021841 | 45.556 | 90 | 48 | 1 | 466 | 555 | 2 | 90 | 1.49e-19 | 84.3 |
| Msa0369730 | MtrunA17_Chr2g0307571 | 64.912 | 57 | 20 | 0 | 877 | 933 | 1 | 57 | 9.56e-18 | 78.2 |
| Msa0369730 | MtrunA17_Chr3g0096361 | 53.125 | 64 | 30 | 0 | 481 | 544 | 1 | 64 | 3.12e-14 | 68.9 |
| Msa0369730 | MtrunA17_Chr2g0308591 | 53.704 | 54 | 21 | 1 | 616 | 665 | 50 | 103 | 4.22e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369730 | AT3G51690.1 | 41.727 | 278 | 155 | 3 | 719 | 994 | 59 | 331 | 4.46e-68 | 231 |
| Msa0369730 | AT3G51700.1 | 42.545 | 275 | 154 | 3 | 719 | 991 | 60 | 332 | 4.03e-64 | 221 |
| Msa0369730 | AT5G28780.1 | 41.313 | 259 | 150 | 1 | 736 | 994 | 74 | 330 | 9.57e-60 | 208 |
Find 210 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCACCATGTACGATAAA+TGG | 0.162387 | 3_1:-67043531 | Msa0369730:CDS |
| AGTTATGTTGCTGAGGAATT+TGG | 0.193897 | 3_1:-67041035 | Msa0369730:CDS |
| CGAGTCACTGCTTCCTTCTA+TGG | 0.203683 | 3_1:-67043258 | Msa0369730:CDS |
| TTGGAAGGAAGGGTGATTTC+AGG | 0.210795 | 3_1:-67040950 | Msa0369730:CDS |
| TGCGCGCAAAACTAATAATA+TGG | 0.213432 | 3_1:-67041741 | Msa0369730:CDS |
| CCATTAACCAGGCATCATTT+TGG | 0.218196 | 3_1:-67042699 | Msa0369730:CDS |
| AATTGCCCCAATGGACTTAA+TGG | 0.230467 | 3_1:+67041769 | None:intergenic |
| CATCAAATACGACTCCTTTA+AGG | 0.233622 | 3_1:-67042773 | Msa0369730:CDS |
| TGCGAAGCAAGCCTCCTTAA+AGG | 0.236592 | 3_1:+67042759 | None:intergenic |
| AAATATTTACGACACTATAA+TGG | 0.262621 | 3_1:-67042022 | Msa0369730:CDS |
| CCAAAATGATGCCTGGTTAA+TGG | 0.267296 | 3_1:+67042699 | None:intergenic |
| ATACTCATAACTGACGAAAA+TGG | 0.287218 | 3_1:-67040689 | Msa0369730:CDS |
| TTCATATTATGCAAAATAGA+TGG | 0.296182 | 3_1:+67041301 | None:intergenic |
| ATACGAAATGGAAAGATATT+TGG | 0.298634 | 3_1:-67043871 | Msa0369730:CDS |
| CGTGAACAATGAATGGTATA+TGG | 0.303596 | 3_1:+67041815 | None:intergenic |
| ATGTCTTGTCGGGTTCCTTT+AGG | 0.306595 | 3_1:+67041580 | None:intergenic |
| TGGAGACTGCTACATATAAT+TGG | 0.311993 | 3_1:+67040738 | None:intergenic |
| GATGCAAAAGATCTTACTTA+TGG | 0.311993 | 3_1:-67042979 | Msa0369730:CDS |
| ACCAAGTCTGGCCTGTCTGC+TGG | 0.313174 | 3_1:+67043937 | None:intergenic |
| GTGATTCATTTGCCGATAAT+AGG | 0.313733 | 3_1:-67043401 | Msa0369730:CDS |
| TAACCACAAGATCACATTAA+AGG | 0.316754 | 3_1:-67041068 | Msa0369730:CDS |
| TTGTCCCTTCTTCTGTAAAC+AGG | 0.318665 | 3_1:+67043444 | None:intergenic |
| GGAGGCAAGGTTGTCGTTCT+AGG | 0.323857 | 3_1:-67041634 | Msa0369730:CDS |
| TTTATAGCGACATCAGTTCT+TGG | 0.328376 | 3_1:+67042150 | None:intergenic |
| AGGCTGTTGATCGTAGTTTC+CGG | 0.329905 | 3_1:-67041684 | Msa0369730:CDS |
| GCCCTTTACATAATTCAATA+AGG | 0.331634 | 3_1:+67042831 | None:intergenic |
| AGCATCAATTGTGGGTTGTA+TGG | 0.333752 | 3_1:+67043369 | None:intergenic |
| TGTTAGGACAATTTCTCCTT+TGG | 0.346013 | 3_1:+67041900 | None:intergenic |
| CAACATGATCACCTGAACTA+TGG | 0.347054 | 3_1:+67041347 | None:intergenic |
| TCATCATCTTCAAATATAAT+AGG | 0.348969 | 3_1:+67043084 | None:intergenic |
| ACTTCCTCATGCTCATATTC+TGG | 0.349651 | 3_1:-67043703 | Msa0369730:CDS |
| TGGATGAACAATTCGAAAAT+CGG | 0.350755 | 3_1:+67043668 | None:intergenic |
| AGACGCATCTTGCGTGTTCC+AGG | 0.353446 | 3_1:-67042553 | Msa0369730:intron |
| TCGTTCTAGGTGGTGACTTT+CGG | 0.356169 | 3_1:-67041621 | Msa0369730:CDS |
| GAATTTGCAGAATGGGTATT+GGG | 0.364183 | 3_1:-67041442 | Msa0369730:CDS |
| AAAATTCTGCTCACCAAGTC+TGG | 0.364829 | 3_1:+67043925 | None:intergenic |
| GAACACGCAAGATGCGTCTT+TGG | 0.365600 | 3_1:+67042557 | None:intergenic |
| GGCTGTTGATCGTAGTTTCC+GGG | 0.371427 | 3_1:-67041683 | Msa0369730:CDS |
| GGCATTGGTGATGGTGTTGT+TGG | 0.371800 | 3_1:-67041421 | Msa0369730:CDS |
| TTGAACAAAATTAATGCATC+AGG | 0.376267 | 3_1:-67041097 | Msa0369730:CDS |
| GTGGGAGAACTGCTCATTCC+AGG | 0.385556 | 3_1:-67041840 | Msa0369730:CDS |
| AAATTCCTCAGCAACATAAC+TGG | 0.386874 | 3_1:+67041037 | None:intergenic |
| ACTGCTTCCTTCTATGGGTC+TGG | 0.392785 | 3_1:-67043252 | Msa0369730:CDS |
| TGAAGATGATGATGACTTAG+AGG | 0.395469 | 3_1:-67043073 | Msa0369730:CDS |
| TTGCGTTTATTATGTCTTGT+CGG | 0.397080 | 3_1:+67041569 | None:intergenic |
| CCAGTAGTACTGTTGCTAAC+AGG | 0.398275 | 3_1:-67041147 | Msa0369730:CDS |
| ATAGCAGCACTTCTTATTCC+AGG | 0.399317 | 3_1:-67041862 | Msa0369730:CDS |
| AGAATTTGCAGAATGGGTAT+TGG | 0.399417 | 3_1:-67041443 | Msa0369730:CDS |
| ATGCAAAAGATCTTACTTAT+GGG | 0.399737 | 3_1:-67042978 | Msa0369730:CDS |
| CCTGTTAGCAACAGTACTAC+TGG | 0.402436 | 3_1:+67041147 | None:intergenic |
| CACTTCCCATTTATCGTACA+TGG | 0.403840 | 3_1:+67043525 | None:intergenic |
| GCTTTCCATGTAAATTTCAA+TGG | 0.404599 | 3_1:+67042949 | None:intergenic |
| CGCAATATCAATTGCCCCAA+TGG | 0.404619 | 3_1:+67041760 | None:intergenic |
| TGATTTCAGGAAGCAACATT+GGG | 0.404913 | 3_1:-67040937 | Msa0369730:CDS |
| ACCTTATTGAATTATGTAAA+GGG | 0.405361 | 3_1:-67042832 | Msa0369730:CDS |
| TGCGTTTATTATGTCTTGTC+GGG | 0.406045 | 3_1:+67041570 | None:intergenic |
| ATTAAAAGAATTTGCAGAAT+GGG | 0.406121 | 3_1:-67041449 | Msa0369730:CDS |
| TTAATTCAAGAGATACGAAA+TGG | 0.415854 | 3_1:-67043883 | Msa0369730:CDS |
| TAAGGAGGCTTGCTTCGCAT+TGG | 0.419559 | 3_1:-67042755 | Msa0369730:CDS |
| AATATTTACGACACTATAAT+GGG | 0.421394 | 3_1:-67042021 | Msa0369730:CDS |
| AAGGAGGCTTGCTTCGCATT+GGG | 0.421810 | 3_1:-67042754 | Msa0369730:CDS |
| CACATGGTCCATGTATCATA+AGG | 0.426368 | 3_1:+67043568 | None:intergenic |
| CAAATATGTTCTTTCTTCAC+CGG | 0.427236 | 3_1:+67041189 | None:intergenic |
| AATGGCGTAACTGTTCAAAA+AGG | 0.429300 | 3_1:-67043423 | Msa0369730:CDS |
| AATTCCCATTGAAATTTACA+TGG | 0.433874 | 3_1:-67042954 | Msa0369730:CDS |
| ATTGAACCATTAAGTCCATT+GGG | 0.434678 | 3_1:-67041775 | Msa0369730:CDS |
| ACGATTAATCATTACAAGAA+TGG | 0.437482 | 3_1:-67040984 | Msa0369730:CDS |
| CTTTCCATGTAAATTTCAAT+GGG | 0.438399 | 3_1:+67042950 | None:intergenic |
| TTAATTTCATCATAAGAAGT+AGG | 0.439039 | 3_1:+67042808 | None:intergenic |
| ATTGCGAAACAAACAGTAAT+GGG | 0.439084 | 3_1:+67040836 | None:intergenic |
| GCATCAATTCATCACGTCTC+TGG | 0.439338 | 3_1:-67041546 | Msa0369730:CDS |
| GAACTTTCGTGAACAATGAA+TGG | 0.442010 | 3_1:+67041808 | None:intergenic |
| CATTGAACCATTAAGTCCAT+TGG | 0.445894 | 3_1:-67041776 | Msa0369730:CDS |
| CTATGGATAAGTAGGTCGTC+GGG | 0.446055 | 3_1:+67041364 | None:intergenic |
| CACCTTATTGAATTATGTAA+AGG | 0.446904 | 3_1:-67042833 | Msa0369730:CDS |
| TGGGACAACATACCTATTAT+CGG | 0.446971 | 3_1:+67043389 | None:intergenic |
| GAAGATATGTATTGGAAGGA+AGG | 0.449404 | 3_1:-67040961 | Msa0369730:CDS |
| AAGAATGGGAAGATATGTAT+TGG | 0.451099 | 3_1:-67040969 | Msa0369730:CDS |
| TTTAATGTGATCTTGTGGTT+AGG | 0.453614 | 3_1:+67041070 | None:intergenic |
| AATTATATGTAGCAGTCTCC+AGG | 0.455772 | 3_1:-67040736 | Msa0369730:CDS |
| GACCTACTTATCCATAGTTC+AGG | 0.455814 | 3_1:-67041358 | Msa0369730:CDS |
| TTGCTTCGCATTGGGTTTGT+TGG | 0.456455 | 3_1:-67042746 | Msa0369730:CDS |
| GTCTTGGTGACCATTTGTGT+TGG | 0.457979 | 3_1:+67042923 | None:intergenic |
| ATTCACCATGTACGATAAAT+GGG | 0.462619 | 3_1:-67043530 | Msa0369730:CDS |
| TCTGGTGTGTGAACATCATC+AGG | 0.463504 | 3_1:+67041124 | None:intergenic |
| AAACAATGTCTGTGCATCAT+TGG | 0.464739 | 3_1:+67041709 | None:intergenic |
| GATGTCGCTATAAATAGTGC+TGG | 0.468862 | 3_1:-67042141 | Msa0369730:CDS |
| GGATGAACAATTCGAAAATC+GGG | 0.469349 | 3_1:+67043669 | None:intergenic |
| GTTACCCTGTTTACAGAAGA+AGG | 0.471656 | 3_1:-67043449 | Msa0369730:CDS |
| CGATTAATCATTACAAGAAT+GGG | 0.471855 | 3_1:-67040983 | Msa0369730:CDS |
| GTCGGAACCAGACCCATAGA+AGG | 0.472382 | 3_1:+67043245 | None:intergenic |
| GCGCGCAAAACTAATAATAT+GGG | 0.472567 | 3_1:-67041740 | Msa0369730:CDS |
| ATATATGGGTACGGTGGTAC+AGG | 0.473267 | 3_1:-67041964 | Msa0369730:CDS |
| GCATCAATTGTGGGTTGTAT+GGG | 0.475140 | 3_1:+67043370 | None:intergenic |
| TAAACTTCAGCATCAATTGT+GGG | 0.479202 | 3_1:+67043361 | None:intergenic |
| TCTTGGTGACCATTTGTGTT+GGG | 0.485447 | 3_1:+67042924 | None:intergenic |
| GCCAGCAGACAGGCCAGACT+TGG | 0.488060 | 3_1:-67043938 | Msa0369730:CDS |
| GTGATTTCAGGAAGCAACAT+TGG | 0.490638 | 3_1:-67040938 | Msa0369730:CDS |
| CAATAAAGATTCATTGAAAG+AGG | 0.493662 | 3_1:-67042085 | Msa0369730:CDS |
| ATGCACATATTAATGTTGAA+TGG | 0.494560 | 3_1:-67043338 | Msa0369730:CDS |
| CAATGGACTTAATGGTTCAA+TGG | 0.495590 | 3_1:+67041777 | None:intergenic |
| TTTAATTTCATCACAAGAGT+CGG | 0.497199 | 3_1:+67043227 | None:intergenic |
| AGGAATTTGGACATAAATGC+TGG | 0.499791 | 3_1:-67041022 | Msa0369730:CDS |
| TACCACTTGACGCCACTGTT+AGG | 0.500493 | 3_1:+67041884 | None:intergenic |
| GTCTCATCCCTTATGATACA+TGG | 0.500691 | 3_1:-67043576 | Msa0369730:CDS |
| CACAACAAATGTCGTATACA+AGG | 0.501001 | 3_1:-67040651 | Msa0369730:CDS |
| CTGTTAGCAACAGTACTACT+GGG | 0.503897 | 3_1:+67041148 | None:intergenic |
| GGAAAGCGTCCCAACACAAA+TGG | 0.504550 | 3_1:-67042933 | Msa0369730:CDS |
| TAATTTCATCATAAGAAGTA+GGG | 0.506867 | 3_1:+67042809 | None:intergenic |
| AGGAAGCAACATTGGGGACA+AGG | 0.510135 | 3_1:-67040930 | Msa0369730:CDS |
| ACCGTGCAAAAGTCTCATAT+TGG | 0.511284 | 3_1:+67041495 | None:intergenic |
| ACATGGTCCATGTATCATAA+GGG | 0.512793 | 3_1:+67043569 | None:intergenic |
| TGGGTATTGGGCATTGGTGA+TGG | 0.516885 | 3_1:-67041430 | Msa0369730:CDS |
| GGTCAATCATTAAAACAAGT+TGG | 0.518278 | 3_1:-67040794 | Msa0369730:CDS |
| GGTAGTGTGGTCTAAAACAT+GGG | 0.522832 | 3_1:-67042608 | Msa0369730:CDS |
| ATTCTACCAGTGGTTCCTAA+AGG | 0.523938 | 3_1:-67041595 | Msa0369730:CDS |
| CGGGTTCCTTTAGGAACCAC+TGG | 0.524247 | 3_1:+67041589 | None:intergenic |
| CAGTCTCCAGGGTGACATCA+AGG | 0.525728 | 3_1:-67040724 | Msa0369730:CDS |
| AATTAAAAGAATTTGCAGAA+TGG | 0.527008 | 3_1:-67041450 | Msa0369730:CDS |
| CATTGCGAAACAAACAGTAA+TGG | 0.528541 | 3_1:+67040835 | None:intergenic |
| TGCAAAGCGGACATTCCATT+CGG | 0.531383 | 3_1:-67041655 | Msa0369730:CDS |
| GCAGAATGGGTATTGGGCAT+TGG | 0.532034 | 3_1:-67041436 | Msa0369730:CDS |
| CGGTTCCCCAAAATGATGCC+TGG | 0.532174 | 3_1:+67042692 | None:intergenic |
| TGAGACAATATTGTAGAGCT+CGG | 0.532339 | 3_1:+67043593 | None:intergenic |
| ACTGATACACCTCTTTGTCT+TGG | 0.533203 | 3_1:+67042907 | None:intergenic |
| TAATGGGAAATTGCCTGCGT+TGG | 0.534567 | 3_1:+67040852 | None:intergenic |
| CATTGAAAGAGGAGCATGAT+CGG | 0.537151 | 3_1:-67042074 | Msa0369730:CDS |
| AACGGAATTCTAGTGTCTGA+AGG | 0.539563 | 3_1:+67040881 | None:intergenic |
| GAGACAATATTGTAGAGCTC+GGG | 0.540168 | 3_1:+67043594 | None:intergenic |
| TTAAACTTCAGCATCAATTG+TGG | 0.542931 | 3_1:+67043360 | None:intergenic |
| TCATATTATGCAAAATAGAT+GGG | 0.543781 | 3_1:+67041302 | None:intergenic |
| CTACCTTTAATGTGATCTTG+TGG | 0.544769 | 3_1:+67041065 | None:intergenic |
| CACTATAATGGGCAGAGTTG+AGG | 0.546164 | 3_1:-67042010 | Msa0369730:CDS |
| GTTTATTGATGCCATTAACC+AGG | 0.546453 | 3_1:-67042710 | Msa0369730:CDS |
| AGGTAGTGTGGTCTAAAACA+TGG | 0.552850 | 3_1:-67042609 | Msa0369730:CDS |
| GAGTCACTGCTTCCTTCTAT+GGG | 0.554904 | 3_1:-67043257 | Msa0369730:CDS |
| GAATGAGCAGTTCTCCCACC+TGG | 0.558929 | 3_1:+67041844 | None:intergenic |
| ATAAATGCTGGCTTGTGCAA+TGG | 0.560740 | 3_1:-67041010 | Msa0369730:CDS |
| GTTGGAGACGCATGTGATGA+TGG | 0.563137 | 3_1:-67041403 | Msa0369730:CDS |
| CACCTGAACTATGGATAAGT+AGG | 0.564269 | 3_1:+67041356 | None:intergenic |
| GGACATTCCATTCGGAGGCA+AGG | 0.566033 | 3_1:-67041647 | Msa0369730:CDS |
| TATGTTATGTCTTTGATACC+CGG | 0.566036 | 3_1:-67041208 | Msa0369730:CDS |
| TTCTTGGCATAGACGGATAG+TGG | 0.566761 | 3_1:+67042166 | None:intergenic |
| AATGAATGGTATATGGAACC+TGG | 0.566866 | 3_1:+67041822 | None:intergenic |
| TGCCTGCGTTGGAACTTGAA+CGG | 0.568686 | 3_1:+67040863 | None:intergenic |
| ACAATTTGAAGCCAGCAGAC+AGG | 0.568822 | 3_1:-67043948 | Msa0369730:CDS |
| ATATTTGGCAAAGTCAAGGC+AGG | 0.569463 | 3_1:-67043856 | Msa0369730:intron |
| TAAAATTTCTCCCCAGACCC+TGG | 0.570893 | 3_1:+67042862 | None:intergenic |
| GAAGGTTGCAATGATAGTCT+AGG | 0.571353 | 3_1:+67040899 | None:intergenic |
| ACCTTTCCTTGATGTCACCC+TGG | 0.571952 | 3_1:+67040718 | None:intergenic |
| TTTGTTCAAGTACGTTAACA+AGG | 0.574322 | 3_1:-67043289 | Msa0369730:CDS |
| AGGAAGCAGTGACTCGGTCG+TGG | 0.576505 | 3_1:+67043265 | None:intergenic |
| ACGACAACCTTGCCTCCGAA+TGG | 0.582860 | 3_1:+67041640 | None:intergenic |
| AAATATGTTCTTTCTTCACC+GGG | 0.583814 | 3_1:+67041190 | None:intergenic |
| AGACAAAGAGGTGTATCAGT+TGG | 0.586490 | 3_1:-67042904 | Msa0369730:CDS |
| TCATCTGCATTGAGATCCAA+AGG | 0.587923 | 3_1:-67041916 | Msa0369730:CDS |
| CATAGAAGGAAGCAGTGACT+CGG | 0.588980 | 3_1:+67043259 | None:intergenic |
| AAAGATATTTGGCAAAGTCA+AGG | 0.589985 | 3_1:-67043860 | Msa0369730:CDS |
| ATGGGAAGATATGTATTGGA+AGG | 0.591972 | 3_1:-67040965 | Msa0369730:CDS |
| AAGATATGTATTGGAAGGAA+GGG | 0.592161 | 3_1:-67040960 | Msa0369730:CDS |
| CTTTCGGCAAATTCTACCAG+TGG | 0.594018 | 3_1:-67041605 | Msa0369730:CDS |
| ACTATGGATAAGTAGGTCGT+CGG | 0.595124 | 3_1:+67041363 | None:intergenic |
| TGCAAAAGATCTTACTTATG+GGG | 0.595187 | 3_1:-67042977 | Msa0369730:CDS |
| GTCCTAACAGTGGCGTCAAG+TGG | 0.595498 | 3_1:-67041886 | Msa0369730:CDS |
| AAACTCAATCGTTCTACAGA+AGG | 0.595669 | 3_1:+67043126 | None:intergenic |
| AAAGAGGTGTATCAGTTGGA+AGG | 0.598040 | 3_1:-67042900 | Msa0369730:CDS |
| CAATTCGAAAATCGGGATGG+AGG | 0.598558 | 3_1:+67043676 | None:intergenic |
| GAGTTCCAGTTATGTTGCTG+AGG | 0.598828 | 3_1:-67041042 | Msa0369730:CDS |
| ATGTCGCTATAAATAGTGCT+GGG | 0.601450 | 3_1:-67042140 | Msa0369730:CDS |
| TGCTTACAAATCAATTTGCG+CGG | 0.602367 | 3_1:-67042636 | Msa0369730:CDS |
| TTCCGTTCAAGTTCCAACGC+AGG | 0.603006 | 3_1:-67040865 | Msa0369730:CDS |
| TTGCGCGGCCAGAGGTAGTG+TGG | 0.603440 | 3_1:-67042621 | Msa0369730:CDS |
| AAGACCAGAATATGAGCATG+AGG | 0.607960 | 3_1:+67043699 | None:intergenic |
| TGTCCGCTTTGCATACATCC+CGG | 0.608231 | 3_1:+67041665 | None:intergenic |
| TGTCCCTTCTTCTGTAAACA+GGG | 0.612296 | 3_1:+67043445 | None:intergenic |
| GTAACCGTCAGCATCAATAA+CGG | 0.616356 | 3_1:+67043467 | None:intergenic |
| ACATCAGTTCTTGGCATAGA+CGG | 0.618006 | 3_1:+67042159 | None:intergenic |
| TTACCCTGTTTACAGAAGAA+GGG | 0.618785 | 3_1:-67043448 | Msa0369730:CDS |
| CCGCAATCTGTGTTCTCTCA+CGG | 0.621486 | 3_1:-67040761 | Msa0369730:CDS |
| CAGCACTTCTTATTCCAGGT+GGG | 0.621978 | 3_1:-67041858 | Msa0369730:CDS |
| ATGACCATTAACAAAAGTCA+AGG | 0.622895 | 3_1:-67040815 | Msa0369730:CDS |
| AAATGGTCACCAAGACAAAG+AGG | 0.624551 | 3_1:-67042916 | Msa0369730:CDS |
| CAAATACGACTCCTTTAAGG+AGG | 0.628320 | 3_1:-67042770 | Msa0369730:CDS |
| GCAGCACTTCTTATTCCAGG+TGG | 0.628547 | 3_1:-67041859 | Msa0369730:CDS |
| TTGTTCAAGTACGTTAACAA+GGG | 0.631888 | 3_1:-67043288 | Msa0369730:CDS |
| AAATCAATTTGCGCGGCCAG+AGG | 0.632559 | 3_1:-67042629 | Msa0369730:CDS |
| AACACCGTTATTGATGCTGA+CGG | 0.634090 | 3_1:-67043471 | Msa0369730:CDS |
| AGAGTTGAGGCAAATAAACA+AGG | 0.635203 | 3_1:-67041997 | Msa0369730:CDS |
| TAATCTTCTCATAAAATCAG+CGG | 0.637807 | 3_1:+67042672 | None:intergenic |
| TCCAGGGTGACATCAAGGAA+AGG | 0.638193 | 3_1:-67040719 | Msa0369730:CDS |
| CACAAGATCACATTAAAGGT+AGG | 0.644150 | 3_1:-67041064 | Msa0369730:CDS |
| CCGTGAGAGAACACAGATTG+CGG | 0.645526 | 3_1:+67040761 | None:intergenic |
| GAGAGAACACAGATTGCGGT+AGG | 0.649708 | 3_1:+67040765 | None:intergenic |
| GGCAAGGTTGTCGTTCTAGG+TGG | 0.651583 | 3_1:-67041631 | Msa0369730:CDS |
| GAACAATTCGAAAATCGGGA+TGG | 0.652657 | 3_1:+67043673 | None:intergenic |
| ATTATATGTAGCAGTCTCCA+GGG | 0.660772 | 3_1:-67040735 | Msa0369730:CDS |
| GATTTCAGGAAGCAACATTG+GGG | 0.671138 | 3_1:-67040936 | Msa0369730:CDS |
| AAAGCGGACATTCCATTCGG+AGG | 0.677594 | 3_1:-67041652 | Msa0369730:CDS |
| TTGAACCATTAAGTCCATTG+GGG | 0.680425 | 3_1:-67041774 | Msa0369730:CDS |
| TATGGATAAGTAGGTCGTCG+GGG | 0.681115 | 3_1:+67041365 | None:intergenic |
| GTTTACAGAAGAAGGGACAA+TGG | 0.682564 | 3_1:-67043441 | Msa0369730:CDS |
| GCAACAGTACTACTGGGGCA+AGG | 0.686780 | 3_1:+67041154 | None:intergenic |
| AGGAGAAATTGTCCTAACAG+TGG | 0.688353 | 3_1:-67041896 | Msa0369730:CDS |
| GAAAAGCTACTACAGTCCCA+CGG | 0.702334 | 3_1:-67042204 | Msa0369730:CDS |
| TGTCTGCATGTGAAGCTGTG+TGG | 0.719865 | 3_1:-67043182 | Msa0369730:CDS |
| AATTTCTCCCCAGACCCTGG+TGG | 0.720594 | 3_1:+67042865 | None:intergenic |
| TTTCCGGGATGTATGCAAAG+CGG | 0.741518 | 3_1:-67041668 | Msa0369730:CDS |
| CTTATGATACATGGACCATG+TGG | 0.749107 | 3_1:-67043567 | Msa0369730:CDS |
| AACAAATGTCGTATACAAGG+AGG | 0.752374 | 3_1:-67040648 | Msa0369730:CDS |
| TGTTAGCAACAGTACTACTG+GGG | 0.769318 | 3_1:+67041149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGGTTTATTTTTTATATAT+GGG | - | chr3_1:67042623-67042642 | Msa0369730:CDS | 10.0% |
| !!! | AAAATAGTAAAAGCAAATTT+TGG | + | chr3_1:67040798-67040817 | None:intergenic | 15.0% |
| !!! | TGCTATTTATATAATGAATA+CGG | - | chr3_1:67042207-67042226 | Msa0369730:CDS | 15.0% |
| !!! | CAAGGTTTATTTTTTATATA+TGG | - | chr3_1:67042622-67042641 | Msa0369730:CDS | 15.0% |
| !!! | TTATTTTTTATATATGGGTA+CGG | - | chr3_1:67042628-67042647 | Msa0369730:CDS | 15.0% |
| !!! | TTAATTTTGTTCAAAAATTC+TGG | + | chr3_1:67043498-67043517 | None:intergenic | 15.0% |
| !! | GCATGATATTAAAATAACAA+TGG | + | chr3_1:67040845-67040864 | None:intergenic | 20.0% |
| !!! | ATTATTTTGTCAATGTTACT+TGG | + | chr3_1:67040956-67040975 | None:intergenic | 20.0% |
| !! | TCATCATCTTCAAATATAAT+AGG | + | chr3_1:67041520-67041539 | None:intergenic | 20.0% |
| !! | ACCTTATTGAATTATGTAAA+GGG | - | chr3_1:67041769-67041788 | Msa0369730:CDS | 20.0% |
| !! | TAATTTCATCATAAGAAGTA+GGG | + | chr3_1:67041795-67041814 | None:intergenic | 20.0% |
| !! | TTAATTTCATCATAAGAAGT+AGG | + | chr3_1:67041796-67041815 | None:intergenic | 20.0% |
| !! | ACTATACTATTCTTATATCA+TGG | + | chr3_1:67042125-67042144 | None:intergenic | 20.0% |
| !! | AAATATTTACGACACTATAA+TGG | - | chr3_1:67042579-67042598 | Msa0369730:CDS | 20.0% |
| !! | AATATTTACGACACTATAAT+GGG | - | chr3_1:67042580-67042599 | Msa0369730:CDS | 20.0% |
| !! | AATTAAAAGAATTTGCAGAA+TGG | - | chr3_1:67043151-67043170 | Msa0369730:CDS | 20.0% |
| !! | ATTAAAAGAATTTGCAGAAT+GGG | - | chr3_1:67043152-67043171 | Msa0369730:CDS | 20.0% |
| !! | TCATATTATGCAAAATAGAT+GGG | + | chr3_1:67043302-67043321 | None:intergenic | 20.0% |
| !! | TTCATATTATGCAAAATAGA+TGG | + | chr3_1:67043303-67043322 | None:intergenic | 20.0% |
| ! | TTAATTCAAGAGATACGAAA+TGG | - | chr3_1:67040718-67040737 | Msa0369730:CDS | 25.0% |
| ! | ATACGAAATGGAAAGATATT+TGG | - | chr3_1:67040730-67040749 | Msa0369730:CDS | 25.0% |
| !! | ATTTTCTGTATGTCATTACT+AGG | - | chr3_1:67040813-67040832 | Msa0369730:CDS | 25.0% |
| ! | ACAATTGAATTTCAAAAACG+AGG | - | chr3_1:67040875-67040894 | Msa0369730:CDS | 25.0% |
| !! | TTAATATTTTCATCACCACA+TGG | + | chr3_1:67041052-67041071 | None:intergenic | 25.0% |
| ! | ATGCACATATTAATGTTGAA+TGG | - | chr3_1:67041263-67041282 | Msa0369730:CDS | 25.0% |
| !! | TTTAATTTCATCACAAGAGT+CGG | + | chr3_1:67041377-67041396 | None:intergenic | 25.0% |
| !! | GATTGAGTTTTCATTTAGAA+GGG | - | chr3_1:67041488-67041507 | Msa0369730:CDS | 25.0% |
| !! | ATTGAGTTTTCATTTAGAAG+GGG | - | chr3_1:67041489-67041508 | Msa0369730:CDS | 25.0% |
| !! | TATTCGTGACACAAAATTTT+TGG | - | chr3_1:67041570-67041589 | Msa0369730:CDS | 25.0% |
| !! | ATAAGTAAGATCTTTTGCAT+CGG | + | chr3_1:67041623-67041642 | None:intergenic | 25.0% |
| ! | ATGCAAAAGATCTTACTTAT+GGG | - | chr3_1:67041623-67041642 | Msa0369730:CDS | 25.0% |
| ! | AATTCCCATTGAAATTTACA+TGG | - | chr3_1:67041647-67041666 | Msa0369730:CDS | 25.0% |
| ! | CTTTCCATGTAAATTTCAAT+GGG | + | chr3_1:67041654-67041673 | None:intergenic | 25.0% |
| ! | CACCTTATTGAATTATGTAA+AGG | - | chr3_1:67041768-67041787 | Msa0369730:CDS | 25.0% |
| ! | TAATCTTCTCATAAAATCAG+CGG | + | chr3_1:67041932-67041951 | None:intergenic | 25.0% |
| ! | CAATAAAGATTCATTGAAAG+AGG | - | chr3_1:67042516-67042535 | Msa0369730:intron | 25.0% |
| !! | GTACAGGAAAAACTTTTATT+TGG | - | chr3_1:67042653-67042672 | Msa0369730:CDS | 25.0% |
| !!! | GCTCTATTTTTAAAATACTC+TGG | + | chr3_1:67043330-67043349 | None:intergenic | 25.0% |
| ! | TTGAACAAAATTAATGCATC+AGG | - | chr3_1:67043504-67043523 | Msa0369730:CDS | 25.0% |
| ! | ACGATTAATCATTACAAGAA+TGG | - | chr3_1:67043617-67043636 | Msa0369730:CDS | 25.0% |
| ! | CGATTAATCATTACAAGAAT+GGG | - | chr3_1:67043618-67043637 | Msa0369730:CDS | 25.0% |
| AAAGATATTTGGCAAAGTCA+AGG | - | chr3_1:67040741-67040760 | Msa0369730:CDS | 30.0% | |
| TGGATGAACAATTCGAAAAT+CGG | + | chr3_1:67040936-67040955 | None:intergenic | 30.0% | |
| AATTCACCATGTACGATAAA+TGG | - | chr3_1:67041070-67041089 | Msa0369730:CDS | 30.0% | |
| ATTCACCATGTACGATAAAT+GGG | - | chr3_1:67041071-67041090 | Msa0369730:CDS | 30.0% | |
| TAAACTTCAGCATCAATTGT+GGG | + | chr3_1:67041243-67041262 | None:intergenic | 30.0% | |
| TTAAACTTCAGCATCAATTG+TGG | + | chr3_1:67041244-67041263 | None:intergenic | 30.0% | |
| TTTGTTCAAGTACGTTAACA+AGG | - | chr3_1:67041312-67041331 | Msa0369730:CDS | 30.0% | |
| TTGTTCAAGTACGTTAACAA+GGG | - | chr3_1:67041313-67041332 | Msa0369730:CDS | 30.0% | |
| ! | CGATTGAGTTTTCATTTAGA+AGG | - | chr3_1:67041487-67041506 | Msa0369730:CDS | 30.0% |
| ! | AATTTTGTGTCACGAATATG+TGG | + | chr3_1:67041568-67041587 | None:intergenic | 30.0% |
| GATGCAAAAGATCTTACTTA+TGG | - | chr3_1:67041622-67041641 | Msa0369730:CDS | 30.0% | |
| TGCAAAAGATCTTACTTATG+GGG | - | chr3_1:67041624-67041643 | Msa0369730:CDS | 30.0% | |
| GCTTTCCATGTAAATTTCAA+TGG | + | chr3_1:67041655-67041674 | None:intergenic | 30.0% | |
| GCCCTTTACATAATTCAATA+AGG | + | chr3_1:67041773-67041792 | None:intergenic | 30.0% | |
| GATAAGGAAAAACATATACC+TGG | + | chr3_1:67042069-67042088 | None:intergenic | 30.0% | |
| ! | TAAGCAAGAAGCATAAGATA+AGG | + | chr3_1:67042085-67042104 | None:intergenic | 30.0% |
| CTTATATCATGGTATATCAG+TGG | + | chr3_1:67042114-67042133 | None:intergenic | 30.0% | |
| GTATAGTTTATAGCACATCA+CGG | - | chr3_1:67042138-67042157 | Msa0369730:CDS | 30.0% | |
| GTATGGAAAAACAAAGAGTT+TGG | + | chr3_1:67042325-67042344 | None:intergenic | 30.0% | |
| ! | TAGCTTTTCAATTTCTGCAA+GGG | + | chr3_1:67042386-67042405 | None:intergenic | 30.0% |
| !!! | GTCTTTGAAATTTTTTCCGT+GGG | + | chr3_1:67042416-67042435 | None:intergenic | 30.0% |
| !!! | TTTTTTATATATGGGTACGG+TGG | - | chr3_1:67042631-67042650 | Msa0369730:CDS | 30.0% |
| ATTGAACCATTAAGTCCATT+GGG | - | chr3_1:67042826-67042845 | Msa0369730:CDS | 30.0% | |
| TTGCGTTTATTATGTCTTGT+CGG | + | chr3_1:67043035-67043054 | None:intergenic | 30.0% | |
| !!! | TCTTCGACAATCAGATTTTT+TGG | + | chr3_1:67043363-67043382 | None:intergenic | 30.0% |
| TATGTTATGTCTTTGATACC+CGG | - | chr3_1:67043393-67043412 | Msa0369730:CDS | 30.0% | |
| AAATATGTTCTTTCTTCACC+GGG | + | chr3_1:67043414-67043433 | None:intergenic | 30.0% | |
| CAAATATGTTCTTTCTTCAC+CGG | + | chr3_1:67043415-67043434 | None:intergenic | 30.0% | |
| TTTAATGTGATCTTGTGGTT+AGG | + | chr3_1:67043534-67043553 | None:intergenic | 30.0% | |
| TAACCACAAGATCACATTAA+AGG | - | chr3_1:67043533-67043552 | Msa0369730:CDS | 30.0% | |
| AAGAATGGGAAGATATGTAT+TGG | - | chr3_1:67043632-67043651 | Msa0369730:CDS | 30.0% | |
| AAGATATGTATTGGAAGGAA+GGG | - | chr3_1:67043641-67043660 | Msa0369730:CDS | 30.0% | |
| ATTGCGAAACAAACAGTAAT+GGG | + | chr3_1:67043768-67043787 | None:intergenic | 30.0% | |
| ATGACCATTAACAAAAGTCA+AGG | - | chr3_1:67043786-67043805 | Msa0369730:intron | 30.0% | |
| ! | TTGACCTTGACTTTTGTTAA+TGG | + | chr3_1:67043793-67043812 | None:intergenic | 30.0% |
| GGTCAATCATTAAAACAAGT+TGG | - | chr3_1:67043807-67043826 | Msa0369730:intron | 30.0% | |
| ATACTCATAACTGACGAAAA+TGG | - | chr3_1:67043912-67043931 | Msa0369730:CDS | 30.0% | |
| GGATGAACAATTCGAAAATC+GGG | + | chr3_1:67040935-67040954 | None:intergenic | 35.0% | |
| !!! | TCGGGATTTTTTTCTTTGTC+TGG | + | chr3_1:67040992-67041011 | None:intergenic | 35.0% |
| TGAGACAATATTGTAGAGCT+CGG | + | chr3_1:67041011-67041030 | None:intergenic | 35.0% | |
| ACATGGTCCATGTATCATAA+GGG | + | chr3_1:67041035-67041054 | None:intergenic | 35.0% | |
| ! | GTGTTGTCGACATATCTTTT+CGG | + | chr3_1:67041115-67041134 | None:intergenic | 35.0% |
| TTACCCTGTTTACAGAAGAA+GGG | - | chr3_1:67041153-67041172 | Msa0369730:CDS | 35.0% | |
| AATGGCGTAACTGTTCAAAA+AGG | - | chr3_1:67041178-67041197 | Msa0369730:CDS | 35.0% | |
| GTGATTCATTTGCCGATAAT+AGG | - | chr3_1:67041200-67041219 | Msa0369730:CDS | 35.0% | |
| TGGGACAACATACCTATTAT+CGG | + | chr3_1:67041215-67041234 | None:intergenic | 35.0% | |
| AAACTCAATCGTTCTACAGA+AGG | + | chr3_1:67041478-67041497 | None:intergenic | 35.0% | |
| ! | TGAAGATGATGATGACTTAG+AGG | - | chr3_1:67041528-67041547 | Msa0369730:CDS | 35.0% |
| !!! | GTGACACAAAATTTTTGGCA+TGG | - | chr3_1:67041575-67041594 | Msa0369730:CDS | 35.0% |
| !!! | CACAAAATTTTTGGCATGGA+TGG | - | chr3_1:67041579-67041598 | Msa0369730:CDS | 35.0% |
| !!! | AAAATTTTTGGCATGGATGG+AGG | - | chr3_1:67041582-67041601 | Msa0369730:CDS | 35.0% |
| CATCAAATACGACTCCTTTA+AGG | - | chr3_1:67041828-67041847 | Msa0369730:CDS | 35.0% | |
| GTTTATTGATGCCATTAACC+AGG | - | chr3_1:67041891-67041910 | Msa0369730:CDS | 35.0% | |
| ! | CATTAACCAGGCATCATTTT+GGG | - | chr3_1:67041903-67041922 | Msa0369730:CDS | 35.0% |
| ! | ATTAACCAGGCATCATTTTG+GGG | - | chr3_1:67041904-67041923 | Msa0369730:CDS | 35.0% |
| TGCTTACAAATCAATTTGCG+CGG | - | chr3_1:67041965-67041984 | Msa0369730:CDS | 35.0% | |
| ! | GTAGCTTTTCAATTTCTGCA+AGG | + | chr3_1:67042387-67042406 | None:intergenic | 35.0% |
| !!! | GGTCTTTGAAATTTTTTCCG+TGG | + | chr3_1:67042417-67042436 | None:intergenic | 35.0% |
| TTTATAGCGACATCAGTTCT+TGG | + | chr3_1:67042454-67042473 | None:intergenic | 35.0% | |
| ATGTCGCTATAAATAGTGCT+GGG | - | chr3_1:67042461-67042480 | Msa0369730:intron | 35.0% | |
| AGAGTTGAGGCAAATAAACA+AGG | - | chr3_1:67042604-67042623 | Msa0369730:CDS | 35.0% | |
| TGTTAGGACAATTTCTCCTT+TGG | + | chr3_1:67042704-67042723 | None:intergenic | 35.0% | |
| AATGAATGGTATATGGAACC+TGG | + | chr3_1:67042782-67042801 | None:intergenic | 35.0% | |
| CGTGAACAATGAATGGTATA+TGG | + | chr3_1:67042789-67042808 | None:intergenic | 35.0% | |
| GAACTTTCGTGAACAATGAA+TGG | + | chr3_1:67042796-67042815 | None:intergenic | 35.0% | |
| ! | CAATGGACTTAATGGTTCAA+TGG | + | chr3_1:67042827-67042846 | None:intergenic | 35.0% |
| CATTGAACCATTAAGTCCAT+TGG | - | chr3_1:67042825-67042844 | Msa0369730:CDS | 35.0% | |
| TTGAACCATTAAGTCCATTG+GGG | - | chr3_1:67042827-67042846 | Msa0369730:CDS | 35.0% | |
| TGCGCGCAAAACTAATAATA+TGG | - | chr3_1:67042860-67042879 | Msa0369730:CDS | 35.0% | |
| GCGCGCAAAACTAATAATAT+GGG | - | chr3_1:67042861-67042880 | Msa0369730:CDS | 35.0% | |
| AAACAATGTCTGTGCATCAT+TGG | + | chr3_1:67042895-67042914 | None:intergenic | 35.0% | |
| TGCGTTTATTATGTCTTGTC+GGG | + | chr3_1:67043034-67043053 | None:intergenic | 35.0% | |
| ! | ACCAATATGAGACTTTTGCA+CGG | - | chr3_1:67043105-67043124 | Msa0369730:CDS | 35.0% |
| AGAATTTGCAGAATGGGTAT+TGG | - | chr3_1:67043158-67043177 | Msa0369730:CDS | 35.0% | |
| GAATTTGCAGAATGGGTATT+GGG | - | chr3_1:67043159-67043178 | Msa0369730:CDS | 35.0% | |
| CTACCTTTAATGTGATCTTG+TGG | + | chr3_1:67043539-67043558 | None:intergenic | 35.0% | |
| CACAAGATCACATTAAAGGT+AGG | - | chr3_1:67043537-67043556 | Msa0369730:CDS | 35.0% | |
| AAATTCCTCAGCAACATAAC+TGG | + | chr3_1:67043567-67043586 | None:intergenic | 35.0% | |
| AGTTATGTTGCTGAGGAATT+TGG | - | chr3_1:67043566-67043585 | Msa0369730:CDS | 35.0% | |
| AGGAATTTGGACATAAATGC+TGG | - | chr3_1:67043579-67043598 | Msa0369730:CDS | 35.0% | |
| ATGGGAAGATATGTATTGGA+AGG | - | chr3_1:67043636-67043655 | Msa0369730:CDS | 35.0% | |
| GAAGATATGTATTGGAAGGA+AGG | - | chr3_1:67043640-67043659 | Msa0369730:CDS | 35.0% | |
| TGATTTCAGGAAGCAACATT+GGG | - | chr3_1:67043664-67043683 | Msa0369730:CDS | 35.0% | |
| CATTGCGAAACAAACAGTAA+TGG | + | chr3_1:67043769-67043788 | None:intergenic | 35.0% | |
| TGGAGACTGCTACATATAAT+TGG | + | chr3_1:67043866-67043885 | None:intergenic | 35.0% | |
| AATTATATGTAGCAGTCTCC+AGG | - | chr3_1:67043865-67043884 | Msa0369730:CDS | 35.0% | |
| ATTATATGTAGCAGTCTCCA+GGG | - | chr3_1:67043866-67043885 | Msa0369730:CDS | 35.0% | |
| CACAACAAATGTCGTATACA+AGG | - | chr3_1:67043950-67043969 | Msa0369730:CDS | 35.0% | |
| AACAAATGTCGTATACAAGG+AGG | - | chr3_1:67043953-67043972 | Msa0369730:CDS | 35.0% | |
| AAAATTCTGCTCACCAAGTC+TGG | + | chr3_1:67040679-67040698 | None:intergenic | 40.0% | |
| ATATTTGGCAAAGTCAAGGC+AGG | - | chr3_1:67040745-67040764 | Msa0369730:CDS | 40.0% | |
| ACTTCCTCATGCTCATATTC+TGG | - | chr3_1:67040898-67040917 | Msa0369730:CDS | 40.0% | |
| AAGACCAGAATATGAGCATG+AGG | + | chr3_1:67040905-67040924 | None:intergenic | 40.0% | |
| GAACAATTCGAAAATCGGGA+TGG | + | chr3_1:67040931-67040950 | None:intergenic | 40.0% | |
| GAGACAATATTGTAGAGCTC+GGG | + | chr3_1:67041010-67041029 | None:intergenic | 40.0% | |
| GTCTCATCCCTTATGATACA+TGG | - | chr3_1:67041025-67041044 | Msa0369730:CDS | 40.0% | |
| CACATGGTCCATGTATCATA+AGG | + | chr3_1:67041036-67041055 | None:intergenic | 40.0% | |
| CTTATGATACATGGACCATG+TGG | - | chr3_1:67041034-67041053 | Msa0369730:CDS | 40.0% | |
| CACTTCCCATTTATCGTACA+TGG | + | chr3_1:67041079-67041098 | None:intergenic | 40.0% | |
| AACACCGTTATTGATGCTGA+CGG | - | chr3_1:67041130-67041149 | Msa0369730:CDS | 40.0% | |
| GTAACCGTCAGCATCAATAA+CGG | + | chr3_1:67041137-67041156 | None:intergenic | 40.0% | |
| GTTACCCTGTTTACAGAAGA+AGG | - | chr3_1:67041152-67041171 | Msa0369730:CDS | 40.0% | |
| TGTCCCTTCTTCTGTAAACA+GGG | + | chr3_1:67041159-67041178 | None:intergenic | 40.0% | |
| TTGTCCCTTCTTCTGTAAAC+AGG | + | chr3_1:67041160-67041179 | None:intergenic | 40.0% | |
| GTTTACAGAAGAAGGGACAA+TGG | - | chr3_1:67041160-67041179 | Msa0369730:CDS | 40.0% | |
| ! | GCATCAATTGTGGGTTGTAT+GGG | + | chr3_1:67041234-67041253 | None:intergenic | 40.0% |
| ! | AGCATCAATTGTGGGTTGTA+TGG | + | chr3_1:67041235-67041254 | None:intergenic | 40.0% |
| ! | TCTTGGTGACCATTTGTGTT+GGG | + | chr3_1:67041680-67041699 | None:intergenic | 40.0% |
| AAATGGTCACCAAGACAAAG+AGG | - | chr3_1:67041685-67041704 | Msa0369730:CDS | 40.0% | |
| ACTGATACACCTCTTTGTCT+TGG | + | chr3_1:67041697-67041716 | None:intergenic | 40.0% | |
| ! | AGACAAAGAGGTGTATCAGT+TGG | - | chr3_1:67041697-67041716 | Msa0369730:CDS | 40.0% |
| ! | AAAGAGGTGTATCAGTTGGA+AGG | - | chr3_1:67041701-67041720 | Msa0369730:CDS | 40.0% |
| ! | CAAATACGACTCCTTTAAGG+AGG | - | chr3_1:67041831-67041850 | Msa0369730:CDS | 40.0% |
| CCAAAATGATGCCTGGTTAA+TGG | + | chr3_1:67041905-67041924 | None:intergenic | 40.0% | |
| ! | CCATTAACCAGGCATCATTT+TGG | - | chr3_1:67041902-67041921 | Msa0369730:CDS | 40.0% |
| ! | AGGTAGTGTGGTCTAAAACA+TGG | - | chr3_1:67041992-67042011 | Msa0369730:CDS | 40.0% |
| ! | GGTAGTGTGGTCTAAAACAT+GGG | - | chr3_1:67041993-67042012 | Msa0369730:CDS | 40.0% |
| TATCATCTCCATTGTATGCG+AGG | - | chr3_1:67042264-67042283 | Msa0369730:intron | 40.0% | |
| AAAGATGACCTCGCATACAA+TGG | + | chr3_1:67042275-67042294 | None:intergenic | 40.0% | |
| ACATCAGTTCTTGGCATAGA+CGG | + | chr3_1:67042445-67042464 | None:intergenic | 40.0% | |
| GATGTCGCTATAAATAGTGC+TGG | - | chr3_1:67042460-67042479 | Msa0369730:intron | 40.0% | |
| ! | CATTGAAAGAGGAGCATGAT+CGG | - | chr3_1:67042527-67042546 | Msa0369730:intron | 40.0% |
| TCATCTGCATTGAGATCCAA+AGG | - | chr3_1:67042685-67042704 | Msa0369730:CDS | 40.0% | |
| AGGAGAAATTGTCCTAACAG+TGG | - | chr3_1:67042705-67042724 | Msa0369730:CDS | 40.0% | |
| ATAGCAGCACTTCTTATTCC+AGG | - | chr3_1:67042739-67042758 | Msa0369730:CDS | 40.0% | |
| ! | AATTGCCCCAATGGACTTAA+TGG | + | chr3_1:67042835-67042854 | None:intergenic | 40.0% |
| !! | GATGCACAGACATTGTTTTG+AGG | - | chr3_1:67042897-67042916 | Msa0369730:CDS | 40.0% |
| ATTCTACCAGTGGTTCCTAA+AGG | - | chr3_1:67043006-67043025 | Msa0369730:CDS | 40.0% | |
| ACCGTGCAAAAGTCTCATAT+TGG | + | chr3_1:67043109-67043128 | None:intergenic | 40.0% | |
| ACTATGGATAAGTAGGTCGT+CGG | + | chr3_1:67043241-67043260 | None:intergenic | 40.0% | |
| GACCTACTTATCCATAGTTC+AGG | - | chr3_1:67043243-67043262 | Msa0369730:CDS | 40.0% | |
| CACCTGAACTATGGATAAGT+AGG | + | chr3_1:67043248-67043267 | None:intergenic | 40.0% | |
| CAACATGATCACCTGAACTA+TGG | + | chr3_1:67043257-67043276 | None:intergenic | 40.0% | |
| TGTTAGCAACAGTACTACTG+GGG | + | chr3_1:67043455-67043474 | None:intergenic | 40.0% | |
| CTGTTAGCAACAGTACTACT+GGG | + | chr3_1:67043456-67043475 | None:intergenic | 40.0% | |
| !! | ATAAATGCTGGCTTGTGCAA+TGG | - | chr3_1:67043591-67043610 | Msa0369730:CDS | 40.0% |
| GTGATTTCAGGAAGCAACAT+TGG | - | chr3_1:67043663-67043682 | Msa0369730:CDS | 40.0% | |
| GATTTCAGGAAGCAACATTG+GGG | - | chr3_1:67043665-67043684 | Msa0369730:CDS | 40.0% | |
| GAAGGTTGCAATGATAGTCT+AGG | + | chr3_1:67043705-67043724 | None:intergenic | 40.0% | |
| AACGGAATTCTAGTGTCTGA+AGG | + | chr3_1:67043723-67043742 | None:intergenic | 40.0% | |
| ! | ACAATTTGAAGCCAGCAGAC+AGG | - | chr3_1:67040653-67040672 | Msa0369730:CDS | 45.0% |
| CAATTCGAAAATCGGGATGG+AGG | + | chr3_1:67040928-67040947 | None:intergenic | 45.0% | |
| CATAGAAGGAAGCAGTGACT+CGG | + | chr3_1:67041345-67041364 | None:intergenic | 45.0% | |
| GAGTCACTGCTTCCTTCTAT+GGG | - | chr3_1:67041344-67041363 | Msa0369730:CDS | 45.0% | |
| ! | GTCTTGGTGACCATTTGTGT+TGG | + | chr3_1:67041681-67041700 | None:intergenic | 45.0% |
| ! | AGGATTCATTTTGTGCCACC+AGG | - | chr3_1:67041721-67041740 | Msa0369730:CDS | 45.0% |
| ! | GGATTCATTTTGTGCCACCA+GGG | - | chr3_1:67041722-67041741 | Msa0369730:CDS | 45.0% |
| TAAAATTTCTCCCCAGACCC+TGG | + | chr3_1:67041742-67041761 | None:intergenic | 45.0% | |
| TTGCTTCGCATTGGGTTTGT+TGG | - | chr3_1:67041855-67041874 | Msa0369730:CDS | 45.0% | |
| !! | GTTTTAGACCACACTACCTC+TGG | + | chr3_1:67041991-67042010 | None:intergenic | 45.0% |
| CACGGCACAATTTCACAGTA+TGG | - | chr3_1:67042156-67042175 | Msa0369730:CDS | 45.0% | |
| CGTCTAGCTGAAGATCTGTA+TGG | + | chr3_1:67042342-67042361 | None:intergenic | 45.0% | |
| GAAAAGCTACTACAGTCCCA+CGG | - | chr3_1:67042397-67042416 | Msa0369730:intron | 45.0% | |
| TTCTTGGCATAGACGGATAG+TGG | + | chr3_1:67042438-67042457 | None:intergenic | 45.0% | |
| !! | CACTATAATGGGCAGAGTTG+AGG | - | chr3_1:67042591-67042610 | Msa0369730:CDS | 45.0% |
| ATATATGGGTACGGTGGTAC+AGG | - | chr3_1:67042637-67042656 | Msa0369730:CDS | 45.0% | |
| CAGCACTTCTTATTCCAGGT+GGG | - | chr3_1:67042743-67042762 | Msa0369730:CDS | 45.0% | |
| CGCAATATCAATTGCCCCAA+TGG | + | chr3_1:67042844-67042863 | None:intergenic | 45.0% | |
| AGGCTGTTGATCGTAGTTTC+CGG | - | chr3_1:67042917-67042936 | Msa0369730:CDS | 45.0% | |
| TTTCCGGGATGTATGCAAAG+CGG | - | chr3_1:67042933-67042952 | Msa0369730:CDS | 45.0% | |
| TGCAAAGCGGACATTCCATT+CGG | - | chr3_1:67042946-67042965 | Msa0369730:CDS | 45.0% | |
| ! | TCGTTCTAGGTGGTGACTTT+CGG | - | chr3_1:67042980-67042999 | Msa0369730:CDS | 45.0% |
| CTTTCGGCAAATTCTACCAG+TGG | - | chr3_1:67042996-67043015 | Msa0369730:CDS | 45.0% | |
| ATGTCTTGTCGGGTTCCTTT+AGG | + | chr3_1:67043024-67043043 | None:intergenic | 45.0% | |
| GCATCAATTCATCACGTCTC+TGG | - | chr3_1:67043055-67043074 | Msa0369730:CDS | 45.0% | |
| TATGGATAAGTAGGTCGTCG+GGG | + | chr3_1:67043239-67043258 | None:intergenic | 45.0% | |
| CTATGGATAAGTAGGTCGTC+GGG | + | chr3_1:67043240-67043259 | None:intergenic | 45.0% | |
| CCTGTTAGCAACAGTACTAC+TGG | + | chr3_1:67043457-67043476 | None:intergenic | 45.0% | |
| CCAGTAGTACTGTTGCTAAC+AGG | - | chr3_1:67043454-67043473 | Msa0369730:CDS | 45.0% | |
| TCTGGTGTGTGAACATCATC+AGG | + | chr3_1:67043480-67043499 | None:intergenic | 45.0% | |
| GAGTTCCAGTTATGTTGCTG+AGG | - | chr3_1:67043559-67043578 | Msa0369730:CDS | 45.0% | |
| TTGGAAGGAAGGGTGATTTC+AGG | - | chr3_1:67043651-67043670 | Msa0369730:CDS | 45.0% | |
| TAATGGGAAATTGCCTGCGT+TGG | + | chr3_1:67043752-67043771 | None:intergenic | 45.0% | |
| CGAGTCACTGCTTCCTTCTA+TGG | - | chr3_1:67041343-67041362 | Msa0369730:CDS | 50.0% | |
| ACTGCTTCCTTCTATGGGTC+TGG | - | chr3_1:67041349-67041368 | Msa0369730:CDS | 50.0% | |
| TGTCTGCATGTGAAGCTGTG+TGG | - | chr3_1:67041419-67041438 | Msa0369730:CDS | 50.0% | |
| !! | GGAAAGCGTCCCAACACAAA+TGG | - | chr3_1:67041668-67041687 | Msa0369730:CDS | 50.0% |
| ! | ATTTTGTGCCACCAGGGTCT+GGG | - | chr3_1:67041728-67041747 | Msa0369730:CDS | 50.0% |
| TGCGAAGCAAGCCTCCTTAA+AGG | + | chr3_1:67041845-67041864 | None:intergenic | 50.0% | |
| ! | TAAGGAGGCTTGCTTCGCAT+TGG | - | chr3_1:67041846-67041865 | Msa0369730:CDS | 50.0% |
| ! | AAGGAGGCTTGCTTCGCATT+GGG | - | chr3_1:67041847-67041866 | Msa0369730:CDS | 50.0% |
| AAATCAATTTGCGCGGCCAG+AGG | - | chr3_1:67041972-67041991 | Msa0369730:CDS | 50.0% | |
| GAACACGCAAGATGCGTCTT+TGG | + | chr3_1:67042047-67042066 | None:intergenic | 50.0% | |
| TACCACTTGACGCCACTGTT+AGG | + | chr3_1:67042720-67042739 | None:intergenic | 50.0% | |
| GCAGCACTTCTTATTCCAGG+TGG | - | chr3_1:67042742-67042761 | Msa0369730:CDS | 50.0% | |
| GGCTGTTGATCGTAGTTTCC+GGG | - | chr3_1:67042918-67042937 | Msa0369730:CDS | 50.0% | |
| TGTCCGCTTTGCATACATCC+CGG | + | chr3_1:67042939-67042958 | None:intergenic | 50.0% | |
| AAAGCGGACATTCCATTCGG+AGG | - | chr3_1:67042949-67042968 | Msa0369730:CDS | 50.0% | |
| !! | GCAGAATGGGTATTGGGCAT+TGG | - | chr3_1:67043165-67043184 | Msa0369730:CDS | 50.0% |
| !! | TGGGTATTGGGCATTGGTGA+TGG | - | chr3_1:67043171-67043190 | Msa0369730:CDS | 50.0% |
| !! | GGCATTGGTGATGGTGTTGT+TGG | - | chr3_1:67043180-67043199 | Msa0369730:CDS | 50.0% |
| GTTGGAGACGCATGTGATGA+TGG | - | chr3_1:67043198-67043217 | Msa0369730:CDS | 50.0% | |
| AGGAAGCAACATTGGGGACA+AGG | - | chr3_1:67043671-67043690 | Msa0369730:CDS | 50.0% | |
| ! | TTCCGTTCAAGTTCCAACGC+AGG | - | chr3_1:67043736-67043755 | Msa0369730:CDS | 50.0% |
| TGCCTGCGTTGGAACTTGAA+CGG | + | chr3_1:67043741-67043760 | None:intergenic | 50.0% | |
| GAGAGAACACAGATTGCGGT+AGG | + | chr3_1:67043839-67043858 | None:intergenic | 50.0% | |
| CCGTGAGAGAACACAGATTG+CGG | + | chr3_1:67043843-67043862 | None:intergenic | 50.0% | |
| CCGCAATCTGTGTTCTCTCA+CGG | - | chr3_1:67043840-67043859 | Msa0369730:intron | 50.0% | |
| TCCAGGGTGACATCAAGGAA+AGG | - | chr3_1:67043882-67043901 | Msa0369730:CDS | 50.0% | |
| ACCTTTCCTTGATGTCACCC+TGG | + | chr3_1:67043886-67043905 | None:intergenic | 50.0% | |
| GTCGGAACCAGACCCATAGA+AGG | + | chr3_1:67041359-67041378 | None:intergenic | 55.0% | |
| ! | CATTTTGTGCCACCAGGGTC+TGG | - | chr3_1:67041727-67041746 | Msa0369730:CDS | 55.0% |
| ! | TTTTGTGCCACCAGGGTCTG+GGG | - | chr3_1:67041729-67041748 | Msa0369730:CDS | 55.0% |
| AATTTCTCCCCAGACCCTGG+TGG | + | chr3_1:67041739-67041758 | None:intergenic | 55.0% | |
| CGGTTCCCCAAAATGATGCC+TGG | + | chr3_1:67041912-67041931 | None:intergenic | 55.0% | |
| AGACGCATCTTGCGTGTTCC+AGG | - | chr3_1:67042048-67042067 | Msa0369730:CDS | 55.0% | |
| GTCCTAACAGTGGCGTCAAG+TGG | - | chr3_1:67042715-67042734 | Msa0369730:CDS | 55.0% | |
| GAATGAGCAGTTCTCCCACC+TGG | + | chr3_1:67042760-67042779 | None:intergenic | 55.0% | |
| GTGGGAGAACTGCTCATTCC+AGG | - | chr3_1:67042761-67042780 | Msa0369730:CDS | 55.0% | |
| GGACATTCCATTCGGAGGCA+AGG | - | chr3_1:67042954-67042973 | Msa0369730:CDS | 55.0% | |
| ACGACAACCTTGCCTCCGAA+TGG | + | chr3_1:67042964-67042983 | None:intergenic | 55.0% | |
| GGAGGCAAGGTTGTCGTTCT+AGG | - | chr3_1:67042967-67042986 | Msa0369730:CDS | 55.0% | |
| ! | GGCAAGGTTGTCGTTCTAGG+TGG | - | chr3_1:67042970-67042989 | Msa0369730:CDS | 55.0% |
| ! | CGGGTTCCTTTAGGAACCAC+TGG | + | chr3_1:67043015-67043034 | None:intergenic | 55.0% |
| GCAACAGTACTACTGGGGCA+AGG | + | chr3_1:67043450-67043469 | None:intergenic | 55.0% | |
| CAGTCTCCAGGGTGACATCA+AGG | - | chr3_1:67043877-67043896 | Msa0369730:CDS | 55.0% | |
| ACCAAGTCTGGCCTGTCTGC+TGG | + | chr3_1:67040667-67040686 | None:intergenic | 60.0% | |
| !! | AGGAAGCAGTGACTCGGTCG+TGG | + | chr3_1:67041339-67041358 | None:intergenic | 60.0% |
| GCCAGCAGACAGGCCAGACT+TGG | - | chr3_1:67040663-67040682 | Msa0369730:CDS | 65.0% | |
| TTGCGCGGCCAGAGGTAGTG+TGG | - | chr3_1:67041980-67041999 | Msa0369730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 67040631 | 67043992 | 67040631 | ID=Msa0369730;Name=Msa0369730 |
| chr3_1 | mRNA | 67040631 | 67043992 | 67040631 | ID=Msa0369730-mRNA-1;Parent=Msa0369730;Name=Msa0369730-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.66|1|1|3|0|994 |
| chr3_1 | exon | 67043857 | 67043992 | 67043857 | ID=Msa0369730-mRNA-1:exon:13772;Parent=Msa0369730-mRNA-1 |
| chr3_1 | exon | 67042554 | 67043756 | 67042554 | ID=Msa0369730-mRNA-1:exon:13771;Parent=Msa0369730-mRNA-1 |
| chr3_1 | exon | 67040631 | 67042276 | 67040631 | ID=Msa0369730-mRNA-1:exon:13770;Parent=Msa0369730-mRNA-1 |
| chr3_1 | CDS | 67043857 | 67043992 | 67043857 | ID=Msa0369730-mRNA-1:cds;Parent=Msa0369730-mRNA-1 |
| chr3_1 | CDS | 67042554 | 67043756 | 67042554 | ID=Msa0369730-mRNA-1:cds;Parent=Msa0369730-mRNA-1 |
| chr3_1 | CDS | 67040631 | 67042276 | 67040631 | ID=Msa0369730-mRNA-1:cds;Parent=Msa0369730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
