AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0200000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200000 MtrunA17_Chr7g0269651 63.636 814 276 6 157 955 178 986 0.0 1117
Msa0200000 MtrunA17_Chr3g0101871 50.271 923 447 5 203 1118 183 1100 0.0 959
Msa0200000 MtrunA17_Chr1g0173671 59.396 596 233 2 146 741 173 759 0.0 769
Msa0200000 MtrunA17_Chr1g0206501 68.072 498 153 1 904 1395 1 498 0.0 738
Msa0200000 MtrunA17_Chr1g0206491 75.176 427 106 0 206 632 150 576 0.0 701
Msa0200000 MtrunA17_Chr3g0101861 53.978 465 213 1 1145 1608 1 465 1.45e-173 530
Msa0200000 MtrunA17_Chr1g0173691 66.038 371 120 1 1244 1608 1 371 1.58e-170 518
Msa0200000 MtrunA17_Chr1g0173681 65.976 338 111 2 765 1099 2 338 3.63e-155 476
Msa0200000 MtrunA17_Chr7g0269671 68.072 332 99 2 1244 1568 1 332 1.78e-151 465
Msa0200000 MtrunA17_Chr7g0270391 48.649 407 204 1 661 1062 1 407 1.02e-130 413
Msa0200000 MtrunA17_Chr7g0248821 82.234 197 35 0 1412 1608 1 197 9.55e-109 343
Msa0200000 MtrunA17_Chr1g0206511 79.798 198 40 0 1411 1608 1 198 1.68e-108 342
Msa0200000 MtrunA17_Chr3g0133361 53.608 291 134 1 1319 1608 3 293 5.73e-98 317
Msa0200000 MtrunA17_Chr3g0093501 51.957 281 123 2 583 863 1 269 1.00e-92 301
Msa0200000 MtrunA17_Chr7g0269661 60.699 229 89 1 993 1221 1 228 4.93e-86 280
Msa0200000 MtrunA17_Chr6g0472831 52.590 251 119 0 1316 1566 1 251 3.03e-84 276
Msa0200000 MtrunA17_Chr5g0400991 55.491 173 77 0 394 566 2 174 5.50e-62 209
Msa0200000 MtrunA17_Chr3g0100401 70.866 127 37 0 1411 1537 1 127 5.26e-56 190
Msa0200000 MtrunA17_Chr4g0022121 81.395 86 16 0 1058 1143 38 123 7.55e-39 141
Msa0200000 MtrunA17_Chr3g0139511 73.684 76 16 2 1535 1608 107 180 7.35e-29 114
Msa0200000 MtrunA17_Chr3g0129801 73.585 53 14 0 1511 1563 7 59 1.26e-19 84.7
Msa0200000 MtrunA17_Chr4g0021841 45.556 90 48 1 1080 1169 2 90 6.58e-19 83.2
Msa0200000 MtrunA17_Chr2g0307571 64.912 57 20 0 1491 1547 1 57 1.04e-17 78.6
Msa0200000 MtrunA17_Chr3g0096361 53.125 64 30 0 1095 1158 1 64 6.28e-14 68.9
Msa0200000 MtrunA17_Chr2g0308591 53.704 54 21 1 1230 1279 50 103 6.97e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200000 AT3G51690.1 41.727 278 155 3 1333 1608 59 331 3.95e-67 231
Msa0200000 AT3G51700.1 42.545 275 154 3 1333 1605 60 332 2.55e-63 220
Msa0200000 AT5G28780.1 41.313 259 150 1 1350 1608 74 330 2.56e-59 208

Find 343 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGATGAACAATTCGAAAAT+TGG 0.129387 2_1:+19474549 None:intergenic
AATTCACCATGTACGATAAA+TGG 0.162387 2_1:-19474412 Msa0200000:CDS
ACTGCCGGCGGGATGTCTTC+TGG 0.173355 2_1:+19477395 None:intergenic
AGTTATGTTGCTGAGGAATT+TGG 0.193897 2_1:-19471916 Msa0200000:CDS
TCTCCATTCATTGTAAATAC+TGG 0.199458 2_1:+19475982 None:intergenic
TTGGAAGGAAGGGTGATTTC+AGG 0.210795 2_1:-19471831 Msa0200000:CDS
TGCGCGCAAAACTAATAATA+TGG 0.213432 2_1:-19472622 Msa0200000:CDS
CCATTAACCAGGCATCATTT+TGG 0.218196 2_1:-19473580 Msa0200000:CDS
AATTGCCCCAATGGACTTAA+TGG 0.230467 2_1:+19472650 None:intergenic
CATCAAATACGACTCCTTTA+AGG 0.233622 2_1:-19473654 Msa0200000:CDS
TGCGAAGCAAGCCTCCTTAA+AGG 0.236592 2_1:+19473640 None:intergenic
AACCCACCATAATCATTATT+AGG 0.251277 2_1:+19476599 None:intergenic
AAATATTTACGACACTATAA+TGG 0.262621 2_1:-19472903 Msa0200000:CDS
CCAAAATGATGCCTGGTTAA+TGG 0.267296 2_1:+19473580 None:intergenic
ATTGCCGGCGGGACGTCTAT+TGG 0.278453 2_1:+19476884 None:intergenic
CGAGTCACTGCTTCCTTCTA+TGG 0.280691 2_1:-19474139 Msa0200000:CDS
ATACTCATAACTGACGAAAA+TGG 0.287218 2_1:-19471570 Msa0200000:CDS
AACCCACCATAATCATTATC+AGG 0.291625 2_1:+19477087 None:intergenic
TCGAGTCTTGGCGGTTAAAA+TGG 0.294608 2_1:-19475108 Msa0200000:CDS
TTCATATTATGCAAAATAGA+TGG 0.296182 2_1:+19472182 None:intergenic
TCACCGCGAGAGAATATTAA+TGG 0.296412 2_1:+19475313 None:intergenic
ATACGAAATGGAAAGATATT+TGG 0.298634 2_1:-19474752 Msa0200000:CDS
ACGCAGGAGAACAAAATTAT+TGG 0.298778 2_1:-19476443 Msa0200000:CDS
GATGCAAAAGATCTTACTTA+TGG 0.298923 2_1:-19473860 Msa0200000:CDS
CGTGAACAATGAATGGTATA+TGG 0.303596 2_1:+19472696 None:intergenic
CGGAAATGGAATCTGGTAAA+AGG 0.305588 2_1:-19477460 None:intergenic
ATGTCTTGTCGGGTTCCTTT+AGG 0.306595 2_1:+19472461 None:intergenic
TGGAGACTGCTACATATAAT+TGG 0.311993 2_1:+19471619 None:intergenic
ACCAAGTCTGGCCTGTCTGC+TGG 0.313174 2_1:+19474818 None:intergenic
GTGATTCATTTGCCGATAAT+AGG 0.313733 2_1:-19474282 Msa0200000:CDS
TAACCACAAGATCACATTAA+AGG 0.316754 2_1:-19471949 Msa0200000:CDS
TTGTCCCTTCTTCTGTAAAC+AGG 0.318665 2_1:+19474325 None:intergenic
GGAGGCAAGGTTGTCGTTCT+AGG 0.323857 2_1:-19472515 Msa0200000:CDS
TTTATAGCGACATCAGTTCT+TGG 0.328376 2_1:+19473031 None:intergenic
CTGCCGGCGGGATGTCTTCT+GGG 0.329662 2_1:+19477396 None:intergenic
AGGCTGTTGATCGTAGTTTC+CGG 0.329905 2_1:-19472565 Msa0200000:CDS
AATCAATACACTTACGATAA+TGG 0.330181 2_1:-19477368 Msa0200000:CDS
TTAGGTTGATCCCCTGGTTT+AGG 0.330631 2_1:+19475931 None:intergenic
GCCCTTTACATAATTCAATA+AGG 0.331634 2_1:+19473712 None:intergenic
AGCATCAATTGTGGGTTGTA+TGG 0.333752 2_1:+19474250 None:intergenic
ATGCAGGAGAGGAAAATTAT+TGG 0.333829 2_1:-19476930 Msa0200000:CDS
TGTTAGGACAATTTCTCCTT+TGG 0.346013 2_1:+19472781 None:intergenic
CAACATGATCACCTGAACTA+TGG 0.347054 2_1:+19472228 None:intergenic
TGAAACATTATCGGATGAAT+TGG 0.347191 2_1:-19477178 Msa0200000:CDS
ATGCAATGGCGATATGTTCT+TGG 0.348181 2_1:-19474928 Msa0200000:CDS
TCATCATCTTCAAATATAAT+AGG 0.348969 2_1:+19473965 None:intergenic
ACTTCCTCATGCTCATATTC+TGG 0.349651 2_1:-19474584 Msa0200000:CDS
ACTGTAAAGCTACGCTTATT+AGG 0.350976 2_1:-19475511 Msa0200000:CDS
AGACGCATCTTGCGTGTTCC+AGG 0.353446 2_1:-19473434 Msa0200000:intron
CAACTATTGTTGACGAGTTA+AGG 0.354663 2_1:-19475612 Msa0200000:CDS
TCGTTCTAGGTGGTGACTTT+CGG 0.356169 2_1:-19472502 Msa0200000:CDS
GAATTTGCAGAATGGGTATT+GGG 0.364183 2_1:-19472323 Msa0200000:CDS
AAAATTCTGCTCACCAAGTC+TGG 0.364829 2_1:+19474806 None:intergenic
GAACACGCAAGATGCGTCTT+TGG 0.365600 2_1:+19473438 None:intergenic
GGCTGTTGATCGTAGTTTCC+GGG 0.371427 2_1:-19472564 Msa0200000:CDS
GGCATTGGTGATGGTGTTGT+TGG 0.371800 2_1:-19472302 Msa0200000:CDS
TTGCCGGCGGGACGTCTATT+GGG 0.372216 2_1:+19476885 None:intergenic
ATTCATTTGTTAAGTCATAT+AGG 0.375995 2_1:-19475570 Msa0200000:CDS
TTGAACAAAATTAATGCATC+AGG 0.376267 2_1:-19471978 Msa0200000:CDS
ACTGCTTCCTTCTATGGATC+TGG 0.378102 2_1:-19474133 Msa0200000:CDS
CTCCATTCATTGTAAATACT+GGG 0.384444 2_1:+19475983 None:intergenic
GTGTATTGATTGGAAATTGC+CGG 0.384676 2_1:+19476869 None:intergenic
GTGGGAGAACTGCTCATTCC+AGG 0.385556 2_1:-19472721 Msa0200000:CDS
AAATTCCTCAGCAACATAAC+TGG 0.386874 2_1:+19471918 None:intergenic
ATGCAAAAGATCTTACTTAT+GGG 0.390389 2_1:-19473859 Msa0200000:CDS
GGATGAACAATTCGAAAATT+GGG 0.390747 2_1:+19474550 None:intergenic
CAACAATAGTGAAACATTAT+CGG 0.392664 2_1:-19477187 Msa0200000:CDS
TAGGCAACAAACCACCGATT+TGG 0.394003 2_1:+19475950 None:intergenic
ATCGTTGTTGAGTGTGTATC+AGG 0.394303 2_1:-19475388 Msa0200000:CDS
CATTTACATGCAACCACAAA+TGG 0.394578 2_1:-19474880 Msa0200000:CDS
TGAAGATGATGATGACTTAG+AGG 0.395469 2_1:-19473954 Msa0200000:CDS
GAGGTAGCAGCCTTGGTTGT+AGG 0.396690 2_1:-19475442 Msa0200000:CDS
TTGCGTTTATTATGTCTTGT+CGG 0.397080 2_1:+19472450 None:intergenic
CCAGTAGTACTGTTGCTAAC+AGG 0.398275 2_1:-19472028 Msa0200000:CDS
ATAGCAGCACTTCTTATTCC+AGG 0.399317 2_1:-19472743 Msa0200000:CDS
AGAATTTGCAGAATGGGTAT+TGG 0.399417 2_1:-19472324 Msa0200000:CDS
ATTATCGTAAGTGTATTGAT+TGG 0.402274 2_1:+19476859 None:intergenic
CCTGTTAGCAACAGTACTAC+TGG 0.402436 2_1:+19472028 None:intergenic
GTGTTACCCGCAAGGTTTGT+CGG 0.402651 2_1:-19474983 Msa0200000:CDS
ATCCAAGTTCGGTGGGGAAA+AGG 0.403520 2_1:-19475009 Msa0200000:CDS
CACTTCCCATTTATCGTACA+TGG 0.403840 2_1:+19474406 None:intergenic
GCTTTCCATGTAAATTTCAA+TGG 0.404599 2_1:+19473830 None:intergenic
CGCAATATCAATTGCCCCAA+TGG 0.404619 2_1:+19472641 None:intergenic
TGATTTCAGGAAGCAACATT+GGG 0.404913 2_1:-19471818 Msa0200000:CDS
ACCTTATTGAATTATGTAAA+GGG 0.405361 2_1:-19473713 Msa0200000:CDS
TGCGTTTATTATGTCTTGTC+GGG 0.406045 2_1:+19472451 None:intergenic
ATTAAAAGAATTTGCAGAAT+GGG 0.406121 2_1:-19472330 Msa0200000:CDS
TTAATTCAAGAGATACGAAA+TGG 0.415854 2_1:-19474764 Msa0200000:CDS
TAAGGAGGCTTGCTTCGCAT+TGG 0.419559 2_1:-19473636 Msa0200000:CDS
AATATTTACGACACTATAAT+GGG 0.421394 2_1:-19472902 Msa0200000:CDS
AAGGAGGCTTGCTTCGCATT+GGG 0.421810 2_1:-19473635 Msa0200000:CDS
CACATGGTCCATGTATCATA+AGG 0.426368 2_1:+19474449 None:intergenic
CAAATATGTTCTTTCTTCAC+CGG 0.427236 2_1:+19472070 None:intergenic
TTATATGAAGCACTGCTTAG+AGG 0.428982 2_1:-19475040 Msa0200000:CDS
AATGGCGTAACTGTTCAAAA+AGG 0.429300 2_1:-19474304 Msa0200000:CDS
GCACCGCCGACAAACCTTGC+GGG 0.430002 2_1:+19474977 None:intergenic
ATTATCGTAAGTGTATTGAT+TGG 0.431291 2_1:+19477370 None:intergenic
AGATTGAACCCACTCATGAT+TGG 0.432625 2_1:-19476658 Msa0200000:CDS
AATTCCCATTGAAATTTACA+TGG 0.433874 2_1:-19473835 Msa0200000:CDS
ATTGAACCATTAAGTCCATT+GGG 0.434678 2_1:-19472656 Msa0200000:CDS
ACGATTAATCATTACAAGAA+TGG 0.437482 2_1:-19471865 Msa0200000:CDS
CTTTCCATGTAAATTTCAAT+GGG 0.438399 2_1:+19473831 None:intergenic
TTAATTTCATCATAAGAAGT+AGG 0.439039 2_1:+19473689 None:intergenic
ATTGCGAAACAAACAGTAAT+GGG 0.439084 2_1:+19471717 None:intergenic
GCATCAATTCATCACGTCTC+TGG 0.439338 2_1:-19472427 Msa0200000:CDS
GGAACCGCAGTATGTTTGTA+AGG 0.441206 2_1:-19476268 Msa0200000:CDS
GAACTTTCGTGAACAATGAA+TGG 0.442010 2_1:+19472689 None:intergenic
GCTACGCTTATTAGGCAAAA+GGG 0.442592 2_1:-19475503 Msa0200000:CDS
CATTGAACCATTAAGTCCAT+TGG 0.445894 2_1:-19472657 Msa0200000:CDS
CTATGGATAAGTAGGTCGTC+GGG 0.446055 2_1:+19472245 None:intergenic
CACCTTATTGAATTATGTAA+AGG 0.446904 2_1:-19473714 Msa0200000:CDS
TGGGACAACATACCTATTAT+CGG 0.446971 2_1:+19474270 None:intergenic
AGCTACGCTTATTAGGCAAA+AGG 0.449022 2_1:-19475504 Msa0200000:CDS
GAAGATATGTATTGGAAGGA+AGG 0.449404 2_1:-19471842 Msa0200000:CDS
TGTTGATCGGAAATGGAATC+TGG 0.450286 2_1:-19477467 None:intergenic
AAGAATGGGAAGATATGTAT+TGG 0.451099 2_1:-19471850 Msa0200000:CDS
TGACTTAACAAATGAATTTG+CGG 0.451300 2_1:+19475576 None:intergenic
TTTAATGTGATCTTGTGGTT+AGG 0.453614 2_1:+19471951 None:intergenic
ATATACAATTGTGCAAACTT+AGG 0.454014 2_1:+19475913 None:intergenic
ATGTTCGCCTTCACTTCAAT+TGG 0.455306 2_1:-19476045 Msa0200000:CDS
AATTATATGTAGCAGTCTCC+AGG 0.455772 2_1:-19471617 Msa0200000:CDS
GACCTACTTATCCATAGTTC+AGG 0.455814 2_1:-19472239 Msa0200000:CDS
TTGCTTCGCATTGGGTTTGT+TGG 0.456455 2_1:-19473627 Msa0200000:CDS
CTTTAAAATACAACTCATGC+AGG 0.459153 2_1:+19476118 None:intergenic
TGCATCAGAGGTAGCAGCCT+TGG 0.461382 2_1:-19475449 Msa0200000:CDS
ATTCACCATGTACGATAAAT+GGG 0.462619 2_1:-19474411 Msa0200000:CDS
TCTGGTGTGTGAACATCATC+AGG 0.463504 2_1:+19472005 None:intergenic
AAACCATCTCCGGCCATTTG+TGG 0.464374 2_1:+19474867 None:intergenic
AAACAATGTCTGTGCATCAT+TGG 0.464739 2_1:+19472590 None:intergenic
GATGTCGCTATAAATAGTGC+TGG 0.468862 2_1:-19473022 Msa0200000:CDS
ATATTCTCTCGCGGTGAAGA+TGG 0.470677 2_1:-19475307 Msa0200000:CDS
GTTACCCTGTTTACAGAAGA+AGG 0.471656 2_1:-19474330 Msa0200000:CDS
CGATTAATCATTACAAGAAT+GGG 0.471855 2_1:-19471864 Msa0200000:CDS
GCGCGCAAAACTAATAATAT+GGG 0.472567 2_1:-19472621 Msa0200000:CDS
ATATATGGGTACGGTGGTAC+AGG 0.473267 2_1:-19472845 Msa0200000:CDS
GCATCAATTGTGGGTTGTAT+GGG 0.475140 2_1:+19474251 None:intergenic
TGGAAATTTACCAACTGTAT+CGG 0.477602 2_1:+19476414 None:intergenic
TAAACTTCAGCATCAATTGT+GGG 0.479202 2_1:+19474242 None:intergenic
TCCAAGTTCGGTGGGGAAAA+GGG 0.483911 2_1:-19475008 Msa0200000:CDS
GTCGGAACCAGATCCATAGA+AGG 0.485066 2_1:+19474126 None:intergenic
GCCAGCAGACAGGCCAGACT+TGG 0.488060 2_1:-19474819 Msa0200000:CDS
GGTGGTTTGTTGCCTAAACC+AGG 0.489947 2_1:-19475943 Msa0200000:CDS
GTGATTTCAGGAAGCAACAT+TGG 0.490638 2_1:-19471819 Msa0200000:CDS
GATGTTCCTAATAATGATTA+TGG 0.491769 2_1:-19476605 Msa0200000:intron
CAATAAAGATTCATTGAAAG+AGG 0.493662 2_1:-19472966 Msa0200000:CDS
GGAAAGCGTCCCAACGCAAA+TGG 0.494146 2_1:-19473814 Msa0200000:CDS
ATGCACATATTAATGTTGAA+TGG 0.494560 2_1:-19474219 Msa0200000:CDS
GCAAACTTAGGTTGATCCCC+TGG 0.495421 2_1:+19475925 None:intergenic
CTATGTGCTGCATGCAAGGA+AGG 0.495549 2_1:-19476176 Msa0200000:CDS
CAATGGACTTAATGGTTCAA+TGG 0.495590 2_1:+19472658 None:intergenic
TTTAATTTCATCACAAGAGT+CGG 0.497199 2_1:+19474108 None:intergenic
AGGAATTTGGACATAAATGC+TGG 0.499791 2_1:-19471903 Msa0200000:CDS
TACCACTTGACGCCACTGTT+AGG 0.500493 2_1:+19472765 None:intergenic
GTCTCATCCCTTATGATACA+TGG 0.500691 2_1:-19474457 Msa0200000:CDS
CACAACAAATGTCGTATACA+AGG 0.501001 2_1:-19471532 Msa0200000:CDS
ATGCAGCACATAGAAAATTC+TGG 0.501198 2_1:+19476186 None:intergenic
GATGTTCCTGATAATGATTA+TGG 0.501681 2_1:-19477093 Msa0200000:intron
CTGTTAGCAACAGTACTACT+GGG 0.503897 2_1:+19472029 None:intergenic
TAATTTCATCATAAGAAGTA+GGG 0.506867 2_1:+19473690 None:intergenic
TCTTGGTGACCATTTGCGTT+GGG 0.507277 2_1:+19473805 None:intergenic
TTTAAGTATGAAACCATCTC+CGG 0.508209 2_1:+19474857 None:intergenic
AGGAAGCAACATTGGGGACA+AGG 0.510135 2_1:-19471811 Msa0200000:CDS
ACCGTGCAAAAGTCTCATAT+TGG 0.511284 2_1:+19472376 None:intergenic
GCAACAAACCACCGATTTGG+TGG 0.511529 2_1:+19475953 None:intergenic
TACAACTCATGCAGGGATTG+AGG 0.512429 2_1:+19476126 None:intergenic
ACATGGTCCATGTATCATAA+GGG 0.512793 2_1:+19474450 None:intergenic
CACAGAAGACATGGAGGTGA+TGG 0.515916 2_1:-19476984 Msa0200000:intron
TGGGTATTGGGCATTGGTGA+TGG 0.516885 2_1:-19472311 Msa0200000:CDS
GGTCAATCATTAAAACAAGT+TGG 0.518278 2_1:-19471675 Msa0200000:CDS
CAGCAGAGGGTCAATGATCA+AGG 0.518510 2_1:-19475190 Msa0200000:CDS
GTCTTGGTGACCATTTGCGT+TGG 0.518528 2_1:+19473804 None:intergenic
TGCAATGGCGATATGTTCTT+GGG 0.519447 2_1:-19474927 Msa0200000:CDS
GGAGAAAATTACCACCAAAT+CGG 0.522678 2_1:-19475964 Msa0200000:CDS
GGTAGTGTGGTCTAAAACAT+GGG 0.522832 2_1:-19473489 Msa0200000:CDS
ATTTGTTAAGTCATATAGGT+TGG 0.523007 2_1:-19475566 Msa0200000:CDS
ATTCTACCAGTGGTTCCTAA+AGG 0.523938 2_1:-19472476 Msa0200000:CDS
CGGGTTCCTTTAGGAACCAC+TGG 0.524247 2_1:+19472470 None:intergenic
CACAGAAAACATGGAAGTGA+TGG 0.524313 2_1:-19476497 Msa0200000:intron
CAGTCTCCAGGGTGACATCA+AGG 0.525728 2_1:-19471605 Msa0200000:CDS
AATTAAAAGAATTTGCAGAA+TGG 0.527008 2_1:-19472331 Msa0200000:CDS
CATTGCGAAACAAACAGTAA+TGG 0.528541 2_1:+19471716 None:intergenic
TGCAAAGCGGACATTCCATT+CGG 0.531383 2_1:-19472536 Msa0200000:CDS
GCAGAATGGGTATTGGGCAT+TGG 0.532034 2_1:-19472317 Msa0200000:CDS
CGGTTCCCCAAAATGATGCC+TGG 0.532174 2_1:+19473573 None:intergenic
TGAGACAATATTGTAGAGCT+CGG 0.532339 2_1:+19474474 None:intergenic
ACTGATACACCTCTTTGTCT+TGG 0.533203 2_1:+19473788 None:intergenic
AGGCGAGGACAATCCAAGTT+CGG 0.536298 2_1:-19475020 Msa0200000:CDS
CATTGAAAGAGGAGCATGAT+CGG 0.537151 2_1:-19472955 Msa0200000:CDS
AACGGAATTCTAGTGTCTGA+AGG 0.539563 2_1:+19471762 None:intergenic
GAGACAATATTGTAGAGCTC+GGG 0.540168 2_1:+19474475 None:intergenic
GATTTAGCATGATCGAGTCT+TGG 0.541151 2_1:-19475120 Msa0200000:CDS
CAACCACAAATGGCCGGAGA+TGG 0.542312 2_1:-19474870 Msa0200000:CDS
ATGCAGGGATTGAGGTAGGC+TGG 0.542802 2_1:+19476134 None:intergenic
TTAAACTTCAGCATCAATTG+TGG 0.542931 2_1:+19474241 None:intergenic
TCATATTATGCAAAATAGAT+GGG 0.543781 2_1:+19472183 None:intergenic
CGCAATCAAACCAATCATGA+GGG 0.544529 2_1:+19477136 None:intergenic
CTACCTTTAATGTGATCTTG+TGG 0.544769 2_1:+19471946 None:intergenic
CACTATAATGGGCAGAGTTG+AGG 0.546164 2_1:-19472891 Msa0200000:CDS
GTTTATTGATGCCATTAACC+AGG 0.546453 2_1:-19473591 Msa0200000:CDS
TTTGCTTCCCACAGAAGACA+TGG 0.547190 2_1:-19476993 Msa0200000:intron
CTTTGCACCAATTGAAGTGA+AGG 0.549187 2_1:+19476038 None:intergenic
TTTGCTTCCCACAGAAAACA+TGG 0.549965 2_1:-19476506 Msa0200000:intron
GTGTATTGATTGGAAACTGC+CGG 0.550681 2_1:+19477380 None:intergenic
TTGGTTGAATCCGATACAGT+TGG 0.550963 2_1:-19476424 Msa0200000:intron
CTGATAACGAAACTCGCAAT+CGG 0.551261 2_1:-19475882 Msa0200000:CDS
AATTCTGTGACCATTGCCGT+TGG 0.552058 2_1:+19477430 None:intergenic
AGGTAGTGTGGTCTAAAACA+TGG 0.552850 2_1:-19473490 Msa0200000:CDS
CAATACACTTACGATAATGA+AGG 0.553963 2_1:-19476854 Msa0200000:intron
TGCCTACGTTGGAACTTGAA+CGG 0.557254 2_1:+19471744 None:intergenic
GAATGAGCAGTTCTCCCACC+TGG 0.558929 2_1:+19472725 None:intergenic
ATAAATGCTGGCTTGTGCAA+TGG 0.560740 2_1:-19471891 Msa0200000:CDS
ACGACGATAGAAATTCTTTG+AGG 0.561191 2_1:-19475636 Msa0200000:CDS
GTTGGAGACGCATGTGATGA+TGG 0.563137 2_1:-19472284 Msa0200000:CDS
CAGCAATAGCGAAACACTAT+CGG 0.563939 2_1:-19476699 Msa0200000:CDS
CACCTGAACTATGGATAAGT+AGG 0.564269 2_1:+19472237 None:intergenic
TGTTAGAGCTGATATGTACA+AGG 0.565157 2_1:-19475065 Msa0200000:CDS
GGACATTCCATTCGGAGGCA+AGG 0.566033 2_1:-19472528 Msa0200000:CDS
TATGTTATGTCTTTGATACC+CGG 0.566036 2_1:-19472089 Msa0200000:CDS
AATGAATGGTATATGGAACC+TGG 0.566866 2_1:+19472703 None:intergenic
TATTGGGCATATGTATGTAT+CGG 0.568524 2_1:+19476901 None:intergenic
ACAATTTGAAGCCAGCAGAC+AGG 0.568822 2_1:-19474829 Msa0200000:CDS
TTCTTGGCATAGACGGATAG+TGG 0.569244 2_1:+19473047 None:intergenic
ATATTTGGCAAAGTCAAGGC+AGG 0.569463 2_1:-19474737 Msa0200000:intron
GAGGACAATCCAAGTTCGGT+GGG 0.570677 2_1:-19475016 Msa0200000:CDS
TAAAATTTCTCCCCAGACCC+TGG 0.570893 2_1:+19473743 None:intergenic
GAAGGTTGCAATGATAGTCT+AGG 0.571353 2_1:+19471780 None:intergenic
AATAAGCGTAGCTTTACAGT+TGG 0.571471 2_1:+19475514 None:intergenic
ACCTTTCCTTGATGTCACCC+TGG 0.571952 2_1:+19471599 None:intergenic
TTTGTTCAAGTACGTTAACA+AGG 0.574322 2_1:-19474170 Msa0200000:CDS
ATGGCGATATGTTCTTGGGT+TGG 0.576437 2_1:-19474923 Msa0200000:CDS
AGGAAGCAGTGACTCGGTCG+TGG 0.576505 2_1:+19474146 None:intergenic
AGGCGCAAAACCAACGGCAA+TGG 0.578038 2_1:-19477440 Msa0200000:CDS
TAACGAAACTCGCAATCGGA+TGG 0.579233 2_1:-19475878 Msa0200000:CDS
GAAAATTACCACCAAATCGG+TGG 0.581500 2_1:-19475961 Msa0200000:CDS
TGCATACAAATTGCAGCAGA+GGG 0.582141 2_1:-19475203 Msa0200000:CDS
ACGACAACCTTGCCTCCGAA+TGG 0.582860 2_1:+19472521 None:intergenic
AAATATGTTCTTTCTTCACC+GGG 0.583814 2_1:+19472071 None:intergenic
CAATTAAACCAATCATGAGT+GGG 0.584256 2_1:+19476650 None:intergenic
AGACAAAGAGGTGTATCAGT+TGG 0.586490 2_1:-19473785 Msa0200000:CDS
CATAGAAGGAAGCAGTGACT+CGG 0.587518 2_1:+19474140 None:intergenic
TCCATTCATTGTAAATACTG+GGG 0.587552 2_1:+19475984 None:intergenic
CGAGGACAATCCAAGTTCGG+TGG 0.587745 2_1:-19475017 Msa0200000:CDS
TCATCTGCATTGAGATCCAA+AGG 0.587923 2_1:-19472797 Msa0200000:CDS
TACATGCAACCACAAATGGC+CGG 0.588331 2_1:-19474876 Msa0200000:CDS
TCAAAATTATCAAGATGCAA+TGG 0.589505 2_1:-19474942 Msa0200000:CDS
AAAGATATTTGGCAAAGTCA+AGG 0.589985 2_1:-19474741 Msa0200000:CDS
CTACGCTTATTAGGCAAAAG+GGG 0.591093 2_1:-19475502 Msa0200000:CDS
ATGGGAAGATATGTATTGGA+AGG 0.591972 2_1:-19471846 Msa0200000:CDS
AAGATATGTATTGGAAGGAA+GGG 0.592161 2_1:-19471841 Msa0200000:CDS
TTGCATACAAATTGCAGCAG+AGG 0.593499 2_1:-19475204 Msa0200000:CDS
CTTTCGGCAAATTCTACCAG+TGG 0.594018 2_1:-19472486 Msa0200000:CDS
ACTATGGATAAGTAGGTCGT+CGG 0.595124 2_1:+19472244 None:intergenic
TGCAAAAGATCTTACTTATG+GGG 0.595187 2_1:-19473858 Msa0200000:CDS
GTCCTAACAGTGGCGTCAAG+TGG 0.595498 2_1:-19472767 Msa0200000:CDS
AAACTCAATCGTTCTACAGA+AGG 0.595669 2_1:+19474007 None:intergenic
TAATGCACCAACTGCATCAG+AGG 0.596608 2_1:-19475461 Msa0200000:CDS
AAAGGGTTGTGTTACCCGCA+AGG 0.597077 2_1:-19474991 Msa0200000:CDS
AAAGAGGTGTATCAGTTGGA+AGG 0.598040 2_1:-19473781 Msa0200000:CDS
GAGTTCCAGTTATGTTGCTG+AGG 0.598828 2_1:-19471923 Msa0200000:CDS
GGTAAAAGGCGCAAAACCAA+CGG 0.598968 2_1:-19477446 Msa0200000:CDS
GCTGCTACCTCTGATGCAGT+TGG 0.599510 2_1:+19475454 None:intergenic
ATCATAATCACCTACAACCA+AGG 0.601136 2_1:+19475432 None:intergenic
ATGTCGCTATAAATAGTGCT+GGG 0.601450 2_1:-19473021 Msa0200000:CDS
TGCTTACAAATCAATTTGCG+CGG 0.602367 2_1:-19473517 Msa0200000:CDS
CAATTCGAAAATTGGGATGG+AGG 0.602739 2_1:+19474557 None:intergenic
TTGCGCGGCCAGAGGTAGTG+TGG 0.603440 2_1:-19473502 Msa0200000:CDS
TTAGCATGATCGAGTCTTGG+CGG 0.603747 2_1:-19475117 Msa0200000:CDS
GAACAATTCGAAAATTGGGA+TGG 0.604062 2_1:+19474554 None:intergenic
AAGACCAGAATATGAGCATG+AGG 0.607960 2_1:+19474580 None:intergenic
TGTCCGCTTTGCATACATCC+CGG 0.608231 2_1:+19472546 None:intergenic
TGGTTTGTTGCCTAAACCAG+GGG 0.609285 2_1:-19475941 Msa0200000:CDS
AAAGGGACAAGATGCAGGAG+AGG 0.610331 2_1:-19476941 Msa0200000:CDS
TTTAAAATACAACTCATGCA+GGG 0.611416 2_1:+19476119 None:intergenic
ATTATCGGATGAATTGGATG+TGG 0.611616 2_1:-19477172 Msa0200000:CDS
TGTCCCTTCTTCTGTAAACA+GGG 0.612296 2_1:+19474326 None:intergenic
GTAACCGTCAGCATCAATAA+CGG 0.616356 2_1:+19474348 None:intergenic
ACTCATGCAGGGATTGAGGT+AGG 0.617800 2_1:+19476130 None:intergenic
CCATTCATTGTAAATACTGG+GGG 0.617964 2_1:+19475985 None:intergenic
ACATCAGTTCTTGGCATAGA+CGG 0.618006 2_1:+19473040 None:intergenic
TTACCCTGTTTACAGAAGAA+GGG 0.618785 2_1:-19474329 Msa0200000:CDS
GCAATTAAACCAATCATGAG+TGG 0.619372 2_1:+19476649 None:intergenic
GCGCAATCAAACCAATCATG+AGG 0.620822 2_1:+19477135 None:intergenic
ATGATGCAGCGGATTTCGAG+AGG 0.620976 2_1:-19475414 Msa0200000:CDS
CCGCAATCTGTGTTCTCTCA+CGG 0.621486 2_1:-19471642 Msa0200000:CDS
CAGCACTTCTTATTCCAGGT+GGG 0.621978 2_1:-19472739 Msa0200000:CDS
ATGACCATTAACAAAAGTCA+AGG 0.622895 2_1:-19471696 Msa0200000:CDS
GTGGTTTGTTGCCTAAACCA+GGG 0.623657 2_1:-19475942 Msa0200000:CDS
CAAATACGACTCCTTTAAGG+AGG 0.628320 2_1:-19473651 Msa0200000:CDS
GCAGCACTTCTTATTCCAGG+TGG 0.628547 2_1:-19472740 Msa0200000:CDS
TAATGGGAAATTGCCTACGT+TGG 0.630003 2_1:+19471733 None:intergenic
AGGATTGCAACGCATTAATG+TGG 0.630790 2_1:-19476248 Msa0200000:CDS
TTGTTCAAGTACGTTAACAA+GGG 0.631888 2_1:-19474169 Msa0200000:CDS
AAATCAATTTGCGCGGCCAG+AGG 0.632559 2_1:-19473510 Msa0200000:CDS
TGCACCGCCGACAAACCTTG+CGG 0.632735 2_1:+19474976 None:intergenic
GATTGAGGTAGGCTGGCGAA+TGG 0.632746 2_1:+19476141 None:intergenic
ATTGATTGGAAACTGCCGGC+GGG 0.633580 2_1:+19477384 None:intergenic
TGAAGCACTGCTTAGAGGCG+AGG 0.633744 2_1:-19475035 Msa0200000:CDS
AACACCGTTATTGATGCTGA+CGG 0.634090 2_1:-19474352 Msa0200000:CDS
AGAGTTGAGGCAAATAAACA+AGG 0.635203 2_1:-19472878 Msa0200000:CDS
TGATGCAGCGGATTTCGAGA+GGG 0.635247 2_1:-19475413 Msa0200000:CDS
TAATCTTCTCATAAAATCAG+CGG 0.637807 2_1:+19473553 None:intergenic
TCCAGGGTGACATCAAGGAA+AGG 0.638193 2_1:-19471600 Msa0200000:CDS
ATTGATTGGAAATTGCCGGC+GGG 0.638253 2_1:+19476873 None:intergenic
AATATTAATGGATATTGTAG+CGG 0.640507 2_1:+19475325 None:intergenic
CACAAGATCACATTAAAGGT+AGG 0.644150 2_1:-19471945 Msa0200000:CDS
CCGTGAGAGAACACAGATTG+CGG 0.645526 2_1:+19471642 None:intergenic
GAGAGAACACAGATTGCGGT+AGG 0.649708 2_1:+19471646 None:intergenic
ATGCCCAATAGACGTCCCGC+CGG 0.650431 2_1:-19476888 Msa0200000:CDS
AAATGGTCACCAAGACAAAG+AGG 0.650638 2_1:-19473797 Msa0200000:CDS
GGCAAGGTTGTCGTTCTAGG+TGG 0.651583 2_1:-19472512 Msa0200000:CDS
TATTGATTGGAAATTGCCGG+CGG 0.653541 2_1:+19476872 None:intergenic
ATTATATGTAGCAGTCTCCA+GGG 0.660772 2_1:-19471616 Msa0200000:CDS
GCAAAAGGGGATACGATGGT+CGG 0.661121 2_1:-19475489 Msa0200000:CDS
ACTATCGGATGAATCAGATG+TGG 0.663239 2_1:-19476684 Msa0200000:CDS
CAATACACTTACGATAATGG+AGG 0.663877 2_1:-19477365 Msa0200000:intron
GATTTCAGGAAGCAACATTG+GGG 0.671138 2_1:-19471817 Msa0200000:CDS
GTTAGAGCTGATATGTACAA+GGG 0.673299 2_1:-19475064 Msa0200000:CDS
CAATCAAACCAATCATGAGG+GGG 0.673845 2_1:+19477138 None:intergenic
AAAGCGGACATTCCATTCGG+AGG 0.677594 2_1:-19472533 Msa0200000:CDS
TGTAGGTGATTATGATGCAG+CGG 0.679936 2_1:-19475425 Msa0200000:CDS
TTGAACCATTAAGTCCATTG+GGG 0.680425 2_1:-19472655 Msa0200000:CDS
TATGGATAAGTAGGTCGTCG+GGG 0.681115 2_1:+19472246 None:intergenic
GTTTACAGAAGAAGGGACAA+TGG 0.682564 2_1:-19474322 Msa0200000:CDS
ATGCCCAGAAGACATCCCGC+CGG 0.683619 2_1:-19477399 Msa0200000:CDS
GCAACAGTACTACTGGGGCA+AGG 0.686780 2_1:+19472035 None:intergenic
AGGAGAAATTGTCCTAACAG+TGG 0.688353 2_1:-19472777 Msa0200000:CDS
TTCCGTTCAAGTTCCAACGT+AGG 0.693783 2_1:-19471746 Msa0200000:CDS
GCAATCAAACCAATCATGAG+GGG 0.698064 2_1:+19477137 None:intergenic
CAATCCTTACAAACATACTG+CGG 0.698888 2_1:+19476264 None:intergenic
TTACCCGCAAGGTTTGTCGG+CGG 0.699640 2_1:-19474980 Msa0200000:CDS
GAAAAGCTACTACAGTCCCA+CGG 0.702334 2_1:-19473085 Msa0200000:CDS
TTAGGCAAAAGGGGATACGA+TGG 0.702465 2_1:-19475493 Msa0200000:CDS
TATCCATTAATATTCTCTCG+CGG 0.706728 2_1:-19475316 Msa0200000:CDS
TATTGATTGGAAACTGCCGG+CGG 0.710656 2_1:+19477383 None:intergenic
TGTCTGCATGTGAAGCTGTG+TGG 0.719865 2_1:-19474063 Msa0200000:CDS
AATTTCTCCCCAGACCCTGG+TGG 0.720594 2_1:+19473746 None:intergenic
GCTTCCCACAGAAGACATGG+AGG 0.734970 2_1:-19476990 Msa0200000:intron
TTTCCGGGATGTATGCAAAG+CGG 0.741518 2_1:-19472549 Msa0200000:CDS
CTTATGATACATGGACCATG+TGG 0.749107 2_1:-19474448 Msa0200000:CDS
AGGACAATCCAAGTTCGGTG+GGG 0.749466 2_1:-19475015 Msa0200000:CDS
AACAAATGTCGTATACAAGG+AGG 0.752374 2_1:-19471529 Msa0200000:CDS
GCAATCGGATGGCATCCGTG+AGG 0.766965 2_1:-19475867 Msa0200000:intron
TGTTAGCAACAGTACTACTG+GGG 0.769318 2_1:+19472030 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTGGTTTTTAAAATTTAT+TGG - chr2_1:19472608-19472627 Msa0200000:CDS 10.0%
!! TACAATTTAATATCATAATA+TGG - chr2_1:19473178-19473197 Msa0200000:intron 10.0%
!!! ACTAATTATTGTTTTTATTT+TGG - chr2_1:19473298-19473317 Msa0200000:intron 10.0%
!!! AAGGTTTATTTTTTATATAT+GGG - chr2_1:19476108-19476127 Msa0200000:CDS 10.0%
!!! CTTGTAAATTTTTTCATTAT+AGG + chr2_1:19471665-19471684 None:intergenic 15.0%
!!! GACAATAATTTTTAAAAACA+GGG + chr2_1:19471698-19471717 None:intergenic 15.0%
!!! AGACAATAATTTTTAAAAAC+AGG + chr2_1:19471699-19471718 None:intergenic 15.0%
!!! TCTCATTTTTTATGTTAATA+TGG - chr2_1:19471948-19471967 Msa0200000:CDS 15.0%
!!! TTGGAATTTTTTTTCATTAT+AGG + chr2_1:19472176-19472195 None:intergenic 15.0%
!! TTCACAAAATTTAACAAAAT+AGG + chr2_1:19472211-19472230 None:intergenic 15.0%
!!! TTCTCATTTTAATGTTAATA+TGG - chr2_1:19472435-19472454 Msa0200000:CDS 15.0%
!! AAAATATTCTGAATAATCAA+GGG + chr2_1:19472671-19472690 None:intergenic 15.0%
!!! AAAATAGTAAAAGCAAATTT+TGG + chr2_1:19474283-19474302 None:intergenic 15.0%
!!! TGCTATTTATATAATGAATA+CGG - chr2_1:19475692-19475711 Msa0200000:intron 15.0%
!!! CAAGGTTTATTTTTTATATA+TGG - chr2_1:19476107-19476126 Msa0200000:CDS 15.0%
!!! TTATTTTTTATATATGGGTA+CGG - chr2_1:19476113-19476132 Msa0200000:CDS 15.0%
!!! TTAATTTTGTTCAAAAATTC+TGG + chr2_1:19476983-19477002 None:intergenic 15.0%
!! TCACAAAATTTAACAAAACA+GGG + chr2_1:19471722-19471741 None:intergenic 20.0%
!! TTCACAAAATTTAACAAAAC+AGG + chr2_1:19471723-19471742 None:intergenic 20.0%
!!! ATTTCTCATTTTTATCCTTT+AGG - chr2_1:19471742-19471761 Msa0200000:CDS 20.0%
!! TTAACAAAATAGGACATTAA+AGG + chr2_1:19472201-19472220 None:intergenic 20.0%
!!! ATTTCTCATTTTTATCCTTT+AGG - chr2_1:19471742-19471761 Msa0200000:CDS 20.0%
!! ATTAATTAATTCGAGGTAAT+CGG + chr2_1:19472589-19472608 None:intergenic 20.0%
!! TACCTCGAATTAATTAATAT+TGG - chr2_1:19472591-19472610 Msa0200000:CDS 20.0%
!! AACCAATATTAATTAATTCG+AGG + chr2_1:19472596-19472615 None:intergenic 20.0%
!! CAAAATATTCTGAATAATCA+AGG + chr2_1:19472672-19472691 None:intergenic 20.0%
!!! TATTCAGAATATTTTGATGT+TGG - chr2_1:19472676-19472695 Msa0200000:CDS 20.0%
!!! ATTCAGAATATTTTGATGTT+GGG - chr2_1:19472677-19472696 Msa0200000:CDS 20.0%
!! TAACATACTTACGTAATTAT+TGG - chr2_1:19473151-19473170 Msa0200000:intron 20.0%
!!! ATTCATTTGTTAAGTCATAT+AGG - chr2_1:19473397-19473416 Msa0200000:intron 20.0%
!!! AATATTAATGGATATTGTAG+CGG + chr2_1:19473645-19473664 None:intergenic 20.0%
!!! GATACAAAAATTCTTTTGAT+GGG + chr2_1:19473729-19473748 None:intergenic 20.0%
!!! TGATACAAAAATTCTTTTGA+TGG + chr2_1:19473730-19473749 None:intergenic 20.0%
!! GTAAATGTAATAAAAAGATC+AGG + chr2_1:19474074-19474093 None:intergenic 20.0%
!! GCATGATATTAAAATAACAA+TGG + chr2_1:19474330-19474349 None:intergenic 20.0%
!!! ATTATTTTGTCAATGTTACT+TGG + chr2_1:19474441-19474460 None:intergenic 20.0%
!! TCATCATCTTCAAATATAAT+AGG + chr2_1:19475005-19475024 None:intergenic 20.0%
!! ACCTTATTGAATTATGTAAA+GGG - chr2_1:19475254-19475273 Msa0200000:CDS 20.0%
!! TAATTTCATCATAAGAAGTA+GGG + chr2_1:19475280-19475299 None:intergenic 20.0%
!! TTAATTTCATCATAAGAAGT+AGG + chr2_1:19475281-19475300 None:intergenic 20.0%
!! ACTATACTATTCTTATATCA+TGG + chr2_1:19475610-19475629 None:intergenic 20.0%
!! AAATATTTACGACACTATAA+TGG - chr2_1:19476064-19476083 Msa0200000:CDS 20.0%
!! AATATTTACGACACTATAAT+GGG - chr2_1:19476065-19476084 Msa0200000:CDS 20.0%
!! AATTAAAAGAATTTGCAGAA+TGG - chr2_1:19476636-19476655 Msa0200000:CDS 20.0%
!! ATTAAAAGAATTTGCAGAAT+GGG - chr2_1:19476637-19476656 Msa0200000:CDS 20.0%
!! TCATATTATGCAAAATAGAT+GGG + chr2_1:19476787-19476806 None:intergenic 20.0%
!! TTCATATTATGCAAAATAGA+TGG + chr2_1:19476788-19476807 None:intergenic 20.0%
!! ATTATCGTAAGTGTATTGAT+TGG + chr2_1:19471600-19471619 None:intergenic 25.0%
! AATCAATACACTTACGATAA+TGG - chr2_1:19471599-19471618 Msa0200000:CDS 25.0%
! CAACAATAGTGAAACATTAT+CGG - chr2_1:19471780-19471799 Msa0200000:CDS 25.0%
!! ATTATCGTAAGTGTATTGAT+TGG + chr2_1:19471600-19471619 None:intergenic 25.0%
! GATGTTCCTAATAATGATTA+TGG - chr2_1:19472362-19472381 Msa0200000:CDS 25.0%
! TTCCTAATAATGATTATGGT+GGG - chr2_1:19472366-19472385 Msa0200000:CDS 25.0%
!!! TTCAGAATATTTTGATGTTG+GGG - chr2_1:19472678-19472697 Msa0200000:CDS 25.0%
!! TTTAAAATACAACTCATGCA+GGG + chr2_1:19472851-19472870 None:intergenic 25.0%
!! TAGAAAGAGCAAATACTTTT+TGG - chr2_1:19472876-19472895 Msa0200000:CDS 25.0%
! ATATACAATTGTGCAAACTT+AGG + chr2_1:19473057-19473076 None:intergenic 25.0%
! GAAATAAGAAAATTACCTCA+CGG + chr2_1:19473118-19473137 None:intergenic 25.0%
! TAAGTATGTTAAGCAAAAGA+TGG + chr2_1:19473142-19473161 None:intergenic 25.0%
!!! GTTTTTATTTTGGTGTAGAA+TGG - chr2_1:19473308-19473327 Msa0200000:intron 25.0%
! TGACTTAACAAATGAATTTG+CGG + chr2_1:19473394-19473413 None:intergenic 25.0%
!! ATTTGTTAAGTCATATAGGT+TGG - chr2_1:19473401-19473420 Msa0200000:intron 25.0%
! TAAGTATGATGTCTCAAAAA+CGG + chr2_1:19473622-19473641 None:intergenic 25.0%
!! TTTTTGTATCAATGAAAGAG+TGG - chr2_1:19473739-19473758 Msa0200000:CDS 25.0%
! TCAAAATTATCAAGATGCAA+TGG - chr2_1:19474025-19474044 Msa0200000:CDS 25.0%
! TTAATTCAAGAGATACGAAA+TGG - chr2_1:19474203-19474222 Msa0200000:CDS 25.0%
! ATACGAAATGGAAAGATATT+TGG - chr2_1:19474215-19474234 Msa0200000:CDS 25.0%
!! ATTTTCTGTATGTCATTACT+AGG - chr2_1:19474298-19474317 Msa0200000:CDS 25.0%
! ACAATTGAATTTCAAAAACG+AGG - chr2_1:19474360-19474379 Msa0200000:CDS 25.0%
!! TTAATATTTTCATCACCACA+TGG + chr2_1:19474537-19474556 None:intergenic 25.0%
! ATGCACATATTAATGTTGAA+TGG - chr2_1:19474748-19474767 Msa0200000:CDS 25.0%
!! TTTAATTTCATCACAAGAGT+CGG + chr2_1:19474862-19474881 None:intergenic 25.0%
!! GATTGAGTTTTCATTTAGAA+GGG - chr2_1:19474973-19474992 Msa0200000:CDS 25.0%
!! ATTGAGTTTTCATTTAGAAG+GGG - chr2_1:19474974-19474993 Msa0200000:CDS 25.0%
!! TATTCGTGACACAAAATTTT+TGG - chr2_1:19475055-19475074 Msa0200000:CDS 25.0%
! ATGCAAAAGATCTTACTTAT+GGG - chr2_1:19475108-19475127 Msa0200000:CDS 25.0%
! AATTCCCATTGAAATTTACA+TGG - chr2_1:19475132-19475151 Msa0200000:CDS 25.0%
! CTTTCCATGTAAATTTCAAT+GGG + chr2_1:19475139-19475158 None:intergenic 25.0%
! CACCTTATTGAATTATGTAA+AGG - chr2_1:19475253-19475272 Msa0200000:CDS 25.0%
! TAATCTTCTCATAAAATCAG+CGG + chr2_1:19475417-19475436 None:intergenic 25.0%
! CAATAAAGATTCATTGAAAG+AGG - chr2_1:19476001-19476020 Msa0200000:CDS 25.0%
!! GTACAGGAAAAACTTTTATT+TGG - chr2_1:19476138-19476157 Msa0200000:CDS 25.0%
!!! GCTCTATTTTTAAAATACTC+TGG + chr2_1:19476815-19476834 None:intergenic 25.0%
! TTGAACAAAATTAATGCATC+AGG - chr2_1:19476989-19477008 Msa0200000:intron 25.0%
! ACGATTAATCATTACAAGAA+TGG - chr2_1:19477102-19477121 Msa0200000:CDS 25.0%
! CGATTAATCATTACAAGAAT+GGG - chr2_1:19477103-19477122 Msa0200000:CDS 25.0%
!! TTTTAAAAACAGGGCAGTAA+AGG + chr2_1:19471689-19471708 None:intergenic 30.0%
TGAAACATTATCGGATGAAT+TGG - chr2_1:19471789-19471808 Msa0200000:CDS 30.0%
! GATGTTCCTGATAATGATTA+TGG - chr2_1:19471874-19471893 Msa0200000:CDS 30.0%
! TTCCTGATAATGATTATGGT+GGG - chr2_1:19471878-19471897 Msa0200000:CDS 30.0%
AACAGCATGCAATCTAAAAA+AGG - chr2_1:19472008-19472027 Msa0200000:CDS 30.0%
ACAGCATGCAATCTAAAAAA+GGG - chr2_1:19472009-19472028 Msa0200000:CDS 30.0%
TATTGGGCATATGTATGTAT+CGG + chr2_1:19472069-19472088 None:intergenic 30.0%
CAATACACTTACGATAATGA+AGG - chr2_1:19472113-19472132 Msa0200000:CDS 30.0%
AAATAGGACATTAAAGGTCT+TGG + chr2_1:19472195-19472214 None:intergenic 30.0%
CAATTAAACCAATCATGAGT+GGG + chr2_1:19472320-19472339 None:intergenic 30.0%
GTTCCTAATAATGATTATGG+TGG - chr2_1:19472365-19472384 Msa0200000:CDS 30.0%
AACCCACCATAATCATTATT+AGG + chr2_1:19472371-19472390 None:intergenic 30.0%
ACAGCATGCAATCTAAAAAA+AGG - chr2_1:19472009-19472028 Msa0200000:CDS 30.0%
TGGAAATTTACCAACTGTAT+CGG + chr2_1:19472556-19472575 None:intergenic 30.0%
!! CTTTAAAATACAACTCATGC+AGG + chr2_1:19472852-19472871 None:intergenic 30.0%
ATCGATAAGACCAAAAACAA+TGG - chr2_1:19472952-19472971 Msa0200000:CDS 30.0%
TCCATTCATTGTAAATACTG+GGG + chr2_1:19472986-19473005 None:intergenic 30.0%
CTCCATTCATTGTAAATACT+GGG + chr2_1:19472987-19473006 None:intergenic 30.0%
TCTCCATTCATTGTAAATAC+TGG + chr2_1:19472988-19473007 None:intergenic 30.0%
TATCCATTAATATTCTCTCG+CGG - chr2_1:19473651-19473670 Msa0200000:CDS 30.0%
! TTACAACAATTTTGTTGCGA+TGG - chr2_1:19473825-19473844 Msa0200000:CDS 30.0%
!! TAACATCTTTTTGGTGATCA+CGG + chr2_1:19473887-19473906 None:intergenic 30.0%
!! TATCAGCTCTAACATCTTTT+TGG + chr2_1:19473896-19473915 None:intergenic 30.0%
TTTAAGTATGAAACCATCTC+CGG + chr2_1:19474113-19474132 None:intergenic 30.0%
AAAGATATTTGGCAAAGTCA+AGG - chr2_1:19474226-19474245 Msa0200000:CDS 30.0%
GGATGAACAATTCGAAAATT+GGG + chr2_1:19474420-19474439 None:intergenic 30.0%
TGGATGAACAATTCGAAAAT+TGG + chr2_1:19474421-19474440 None:intergenic 30.0%
AATTCACCATGTACGATAAA+TGG - chr2_1:19474555-19474574 Msa0200000:CDS 30.0%
ATTCACCATGTACGATAAAT+GGG - chr2_1:19474556-19474575 Msa0200000:CDS 30.0%
TAAACTTCAGCATCAATTGT+GGG + chr2_1:19474728-19474747 None:intergenic 30.0%
TTAAACTTCAGCATCAATTG+TGG + chr2_1:19474729-19474748 None:intergenic 30.0%
TTTGTTCAAGTACGTTAACA+AGG - chr2_1:19474797-19474816 Msa0200000:CDS 30.0%
TTGTTCAAGTACGTTAACAA+GGG - chr2_1:19474798-19474817 Msa0200000:CDS 30.0%
! CGATTGAGTTTTCATTTAGA+AGG - chr2_1:19474972-19474991 Msa0200000:CDS 30.0%
! AATTTTGTGTCACGAATATG+TGG + chr2_1:19475053-19475072 None:intergenic 30.0%
GATGCAAAAGATCTTACTTA+TGG - chr2_1:19475107-19475126 Msa0200000:CDS 30.0%
TGCAAAAGATCTTACTTATG+GGG - chr2_1:19475109-19475128 Msa0200000:CDS 30.0%
GCTTTCCATGTAAATTTCAA+TGG + chr2_1:19475140-19475159 None:intergenic 30.0%
GCCCTTTACATAATTCAATA+AGG + chr2_1:19475258-19475277 None:intergenic 30.0%
GATAAGGAAAAACATATACC+TGG + chr2_1:19475554-19475573 None:intergenic 30.0%
! TAAGCAAGAAGCATAAGATA+AGG + chr2_1:19475570-19475589 None:intergenic 30.0%
CTTATATCATGGTATATCAG+TGG + chr2_1:19475599-19475618 None:intergenic 30.0%
GTATAGTTTATAGCACATCA+CGG - chr2_1:19475623-19475642 Msa0200000:CDS 30.0%
GTATGGAAAAACAAAGAGTT+TGG + chr2_1:19475810-19475829 None:intergenic 30.0%
! TAGCTTTTCAATTTCTGCAA+GGG + chr2_1:19475871-19475890 None:intergenic 30.0%
!!! TTTTTTATATATGGGTACGG+TGG - chr2_1:19476116-19476135 Msa0200000:CDS 30.0%
ATTGAACCATTAAGTCCATT+GGG - chr2_1:19476311-19476330 Msa0200000:intron 30.0%
TTGCGTTTATTATGTCTTGT+CGG + chr2_1:19476520-19476539 None:intergenic 30.0%
!!! TCTTCGACAATCAGATTTTT+TGG + chr2_1:19476848-19476867 None:intergenic 30.0%
TATGTTATGTCTTTGATACC+CGG - chr2_1:19476878-19476897 Msa0200000:CDS 30.0%
AAATATGTTCTTTCTTCACC+GGG + chr2_1:19476899-19476918 None:intergenic 30.0%
CAAATATGTTCTTTCTTCAC+CGG + chr2_1:19476900-19476919 None:intergenic 30.0%
TTTAATGTGATCTTGTGGTT+AGG + chr2_1:19477019-19477038 None:intergenic 30.0%
TAACCACAAGATCACATTAA+AGG - chr2_1:19477018-19477037 Msa0200000:intron 30.0%
AAGAATGGGAAGATATGTAT+TGG - chr2_1:19477117-19477136 Msa0200000:CDS 30.0%
AAGATATGTATTGGAAGGAA+GGG - chr2_1:19477126-19477145 Msa0200000:CDS 30.0%
ATTGCGAAACAAACAGTAAT+GGG + chr2_1:19477253-19477272 None:intergenic 30.0%
ATGACCATTAACAAAAGTCA+AGG - chr2_1:19477271-19477290 Msa0200000:intron 30.0%
! TTGACCTTGACTTTTGTTAA+TGG + chr2_1:19477278-19477297 None:intergenic 30.0%
GGTCAATCATTAAAACAAGT+TGG - chr2_1:19477292-19477311 Msa0200000:intron 30.0%
ATACTCATAACTGACGAAAA+TGG - chr2_1:19477397-19477416 Msa0200000:CDS 30.0%
! CAATACACTTACGATAATGG+AGG - chr2_1:19471602-19471621 Msa0200000:CDS 35.0%
ATATCAACGTCATCTCCTAA+AGG + chr2_1:19471760-19471779 None:intergenic 35.0%
ATTATCGGATGAATTGGATG+TGG - chr2_1:19471795-19471814 Msa0200000:CDS 35.0%
! GTTCCTGATAATGATTATGG+TGG - chr2_1:19471877-19471896 Msa0200000:CDS 35.0%
AACCCACCATAATCATTATC+AGG + chr2_1:19471883-19471902 None:intergenic 35.0%
ATGCAGGAGAGGAAAATTAT+TGG - chr2_1:19472037-19472056 Msa0200000:CDS 35.0%
!! GTGTATTGATTGGAAATTGC+CGG + chr2_1:19472101-19472120 None:intergenic 35.0%
ATATCAACGTCATCTCCTAA+AGG + chr2_1:19471760-19471779 None:intergenic 35.0%
GCAATTAAACCAATCATGAG+TGG + chr2_1:19472321-19472340 None:intergenic 35.0%
! ATCACTTCCATGTTTTCTGT+GGG + chr2_1:19472471-19472490 None:intergenic 35.0%
ACGCAGGAGAACAAAATTAT+TGG - chr2_1:19472524-19472543 Msa0200000:CDS 35.0%
CAATCCTTACAAACATACTG+CGG + chr2_1:19472706-19472725 None:intergenic 35.0%
ATGCAGCACATAGAAAATTC+TGG + chr2_1:19472784-19472803 None:intergenic 35.0%
TAAGACCAAAAACAATGGCA+AGG - chr2_1:19472957-19472976 Msa0200000:CDS 35.0%
CCATTCATTGTAAATACTGG+GGG + chr2_1:19472985-19473004 None:intergenic 35.0%
GGAGAAAATTACCACCAAAT+CGG - chr2_1:19473003-19473022 Msa0200000:CDS 35.0%
TGGTTCTCATTGCAATATGT+TGG - chr2_1:19473198-19473217 Msa0200000:intron 35.0%
ACGACGATAGAAATTCTTTG+AGG - chr2_1:19473331-19473350 Msa0200000:intron 35.0%
CAACTATTGTTGACGAGTTA+AGG - chr2_1:19473355-19473374 Msa0200000:intron 35.0%
! AATAAGCGTAGCTTTACAGT+TGG + chr2_1:19473456-19473475 None:intergenic 35.0%
ACTGTAAAGCTACGCTTATT+AGG - chr2_1:19473456-19473475 Msa0200000:CDS 35.0%
ATCATAATCACCTACAACCA+AGG + chr2_1:19473538-19473557 None:intergenic 35.0%
! TCGACGAGATATTCGATTTT+CGG - chr2_1:19473686-19473705 Msa0200000:CDS 35.0%
TGTTAGAGCTGATATGTACA+AGG - chr2_1:19473902-19473921 Msa0200000:CDS 35.0%
GTTAGAGCTGATATGTACAA+GGG - chr2_1:19473903-19473922 Msa0200000:CDS 35.0%
!! TTATATGAAGCACTGCTTAG+AGG - chr2_1:19473927-19473946 Msa0200000:CDS 35.0%
CATTTACATGCAACCACAAA+TGG - chr2_1:19474087-19474106 Msa0200000:CDS 35.0%
GAACAATTCGAAAATTGGGA+TGG + chr2_1:19474416-19474435 None:intergenic 35.0%
!!! TCGGGATTTTTTTCTTTGTC+TGG + chr2_1:19474477-19474496 None:intergenic 35.0%
TGAGACAATATTGTAGAGCT+CGG + chr2_1:19474496-19474515 None:intergenic 35.0%
ACATGGTCCATGTATCATAA+GGG + chr2_1:19474520-19474539 None:intergenic 35.0%
! GTGTTGTCGACATATCTTTT+CGG + chr2_1:19474600-19474619 None:intergenic 35.0%
TTACCCTGTTTACAGAAGAA+GGG - chr2_1:19474638-19474657 Msa0200000:intron 35.0%
AATGGCGTAACTGTTCAAAA+AGG - chr2_1:19474663-19474682 Msa0200000:intron 35.0%
GTGATTCATTTGCCGATAAT+AGG - chr2_1:19474685-19474704 Msa0200000:intron 35.0%
TGGGACAACATACCTATTAT+CGG + chr2_1:19474700-19474719 None:intergenic 35.0%
AAACTCAATCGTTCTACAGA+AGG + chr2_1:19474963-19474982 None:intergenic 35.0%
! TGAAGATGATGATGACTTAG+AGG - chr2_1:19475013-19475032 Msa0200000:CDS 35.0%
!!! GTGACACAAAATTTTTGGCA+TGG - chr2_1:19475060-19475079 Msa0200000:CDS 35.0%
!!! CACAAAATTTTTGGCATGGA+TGG - chr2_1:19475064-19475083 Msa0200000:CDS 35.0%
!!! AAAATTTTTGGCATGGATGG+AGG - chr2_1:19475067-19475086 Msa0200000:CDS 35.0%
CATCAAATACGACTCCTTTA+AGG - chr2_1:19475313-19475332 Msa0200000:CDS 35.0%
GTTTATTGATGCCATTAACC+AGG - chr2_1:19475376-19475395 Msa0200000:CDS 35.0%
! CATTAACCAGGCATCATTTT+GGG - chr2_1:19475388-19475407 Msa0200000:CDS 35.0%
! ATTAACCAGGCATCATTTTG+GGG - chr2_1:19475389-19475408 Msa0200000:CDS 35.0%
TGCTTACAAATCAATTTGCG+CGG - chr2_1:19475450-19475469 Msa0200000:CDS 35.0%
! GTAGCTTTTCAATTTCTGCA+AGG + chr2_1:19475872-19475891 None:intergenic 35.0%
!!! GTCCTTGAAATTTTTTCCGT+GGG + chr2_1:19475901-19475920 None:intergenic 35.0%
TTTATAGCGACATCAGTTCT+TGG + chr2_1:19475939-19475958 None:intergenic 35.0%
ATGTCGCTATAAATAGTGCT+GGG - chr2_1:19475946-19475965 Msa0200000:CDS 35.0%
AGAGTTGAGGCAAATAAACA+AGG - chr2_1:19476089-19476108 Msa0200000:CDS 35.0%
TGTTAGGACAATTTCTCCTT+TGG + chr2_1:19476189-19476208 None:intergenic 35.0%
AATGAATGGTATATGGAACC+TGG + chr2_1:19476267-19476286 None:intergenic 35.0%
CGTGAACAATGAATGGTATA+TGG + chr2_1:19476274-19476293 None:intergenic 35.0%
GAACTTTCGTGAACAATGAA+TGG + chr2_1:19476281-19476300 None:intergenic 35.0%
! CAATGGACTTAATGGTTCAA+TGG + chr2_1:19476312-19476331 None:intergenic 35.0%
CATTGAACCATTAAGTCCAT+TGG - chr2_1:19476310-19476329 Msa0200000:intron 35.0%
TTGAACCATTAAGTCCATTG+GGG - chr2_1:19476312-19476331 Msa0200000:intron 35.0%
TGCGCGCAAAACTAATAATA+TGG - chr2_1:19476345-19476364 Msa0200000:intron 35.0%
GCGCGCAAAACTAATAATAT+GGG - chr2_1:19476346-19476365 Msa0200000:intron 35.0%
AAACAATGTCTGTGCATCAT+TGG + chr2_1:19476380-19476399 None:intergenic 35.0%
TGCGTTTATTATGTCTTGTC+GGG + chr2_1:19476519-19476538 None:intergenic 35.0%
! ACCAATATGAGACTTTTGCA+CGG - chr2_1:19476590-19476609 Msa0200000:intron 35.0%
AGAATTTGCAGAATGGGTAT+TGG - chr2_1:19476643-19476662 Msa0200000:CDS 35.0%
GAATTTGCAGAATGGGTATT+GGG - chr2_1:19476644-19476663 Msa0200000:CDS 35.0%
CTACCTTTAATGTGATCTTG+TGG + chr2_1:19477024-19477043 None:intergenic 35.0%
CACAAGATCACATTAAAGGT+AGG - chr2_1:19477022-19477041 Msa0200000:intron 35.0%
AAATTCCTCAGCAACATAAC+TGG + chr2_1:19477052-19477071 None:intergenic 35.0%
AGTTATGTTGCTGAGGAATT+TGG - chr2_1:19477051-19477070 Msa0200000:intron 35.0%
AGGAATTTGGACATAAATGC+TGG - chr2_1:19477064-19477083 Msa0200000:intron 35.0%
ATGGGAAGATATGTATTGGA+AGG - chr2_1:19477121-19477140 Msa0200000:CDS 35.0%
GAAGATATGTATTGGAAGGA+AGG - chr2_1:19477125-19477144 Msa0200000:CDS 35.0%
TGATTTCAGGAAGCAACATT+GGG - chr2_1:19477149-19477168 Msa0200000:CDS 35.0%
CATTGCGAAACAAACAGTAA+TGG + chr2_1:19477254-19477273 None:intergenic 35.0%
TGGAGACTGCTACATATAAT+TGG + chr2_1:19477351-19477370 None:intergenic 35.0%
AATTATATGTAGCAGTCTCC+AGG - chr2_1:19477350-19477369 Msa0200000:intron 35.0%
ATTATATGTAGCAGTCTCCA+GGG - chr2_1:19477351-19477370 Msa0200000:intron 35.0%
CACAACAAATGTCGTATACA+AGG - chr2_1:19477435-19477454 Msa0200000:CDS 35.0%
AACAAATGTCGTATACAAGG+AGG - chr2_1:19477438-19477457 Msa0200000:CDS 35.0%
!! GTGTATTGATTGGAAACTGC+CGG + chr2_1:19471590-19471609 None:intergenic 40.0%
CAATCAAACCAATCATGAGG+GGG + chr2_1:19471832-19471851 None:intergenic 40.0%
GCAATCAAACCAATCATGAG+GGG + chr2_1:19471833-19471852 None:intergenic 40.0%
CGCAATCAAACCAATCATGA+GGG + chr2_1:19471834-19471853 None:intergenic 40.0%
CTAAAAAAGGGACAAGATGC+AGG - chr2_1:19472021-19472040 Msa0200000:CDS 40.0%
! TATTGATTGGAAATTGCCGG+CGG + chr2_1:19472098-19472117 None:intergenic 40.0%
CAGCAATAGCGAAACACTAT+CGG - chr2_1:19472268-19472287 Msa0200000:CDS 40.0%
ACTATCGGATGAATCAGATG+TGG - chr2_1:19472283-19472302 Msa0200000:CDS 40.0%
AGATTGAACCCACTCATGAT+TGG - chr2_1:19472309-19472328 Msa0200000:CDS 40.0%
TTTGCTTCCCACAGAAAACA+TGG - chr2_1:19472461-19472480 Msa0200000:CDS 40.0%
! CATCACTTCCATGTTTTCTG+TGG + chr2_1:19472472-19472491 None:intergenic 40.0%
CACAGAAAACATGGAAGTGA+TGG - chr2_1:19472470-19472489 Msa0200000:CDS 40.0%
CTAAAAAAAGGACAAGACGC+AGG - chr2_1:19472508-19472527 Msa0200000:CDS 40.0%
TTGGTTGAATCCGATACAGT+TGG - chr2_1:19472543-19472562 Msa0200000:CDS 40.0%
! AGGTAATCGGCAAGCATTTT+TGG + chr2_1:19472576-19472595 None:intergenic 40.0%
AGGATTGCAACGCATTAATG+TGG - chr2_1:19472719-19472738 Msa0200000:CDS 40.0%
! TTTTCTATGTGCTGCATGCA+AGG - chr2_1:19472787-19472806 Msa0200000:CDS 40.0%
ATGTTCGCCTTCACTTCAAT+TGG - chr2_1:19472922-19472941 Msa0200000:CDS 40.0%
CTTTGCACCAATTGAAGTGA+AGG + chr2_1:19472932-19472951 None:intergenic 40.0%
CCCCCAGTATTTACAATGAA+TGG - chr2_1:19472982-19473001 Msa0200000:CDS 40.0%
GAAAATTACCACCAAATCGG+TGG - chr2_1:19473006-19473025 Msa0200000:CDS 40.0%
! CTGATAACGAAACTCGCAAT+CGG - chr2_1:19473085-19473104 Msa0200000:CDS 40.0%
AGCTACGCTTATTAGGCAAA+AGG - chr2_1:19473463-19473482 Msa0200000:CDS 40.0%
GCTACGCTTATTAGGCAAAA+GGG - chr2_1:19473464-19473483 Msa0200000:CDS 40.0%
CTACGCTTATTAGGCAAAAG+GGG - chr2_1:19473465-19473484 Msa0200000:CDS 40.0%
TGTAGGTGATTATGATGCAG+CGG - chr2_1:19473542-19473561 Msa0200000:CDS 40.0%
ATCGTTGTTGAGTGTGTATC+AGG - chr2_1:19473579-19473598 Msa0200000:CDS 40.0%
TCACCGCGAGAGAATATTAA+TGG + chr2_1:19473657-19473676 None:intergenic 40.0%
TTGCATACAAATTGCAGCAG+AGG - chr2_1:19473763-19473782 Msa0200000:CDS 40.0%
TGCATACAAATTGCAGCAGA+GGG - chr2_1:19473764-19473783 Msa0200000:CDS 40.0%
GATTTAGCATGATCGAGTCT+TGG - chr2_1:19473847-19473866 Msa0200000:CDS 40.0%
ATGCAATGGCGATATGTTCT+TGG - chr2_1:19474039-19474058 Msa0200000:CDS 40.0%
TGCAATGGCGATATGTTCTT+GGG - chr2_1:19474040-19474059 Msa0200000:CDS 40.0%
AAAATTCTGCTCACCAAGTC+TGG + chr2_1:19474164-19474183 None:intergenic 40.0%
ATATTTGGCAAAGTCAAGGC+AGG - chr2_1:19474230-19474249 Msa0200000:CDS 40.0%
ACTTCCTCATGCTCATATTC+TGG - chr2_1:19474383-19474402 Msa0200000:CDS 40.0%
AAGACCAGAATATGAGCATG+AGG + chr2_1:19474390-19474409 None:intergenic 40.0%
CAATTCGAAAATTGGGATGG+AGG + chr2_1:19474413-19474432 None:intergenic 40.0%
GAGACAATATTGTAGAGCTC+GGG + chr2_1:19474495-19474514 None:intergenic 40.0%
GTCTCATCCCTTATGATACA+TGG - chr2_1:19474510-19474529 Msa0200000:CDS 40.0%
CACATGGTCCATGTATCATA+AGG + chr2_1:19474521-19474540 None:intergenic 40.0%
CTTATGATACATGGACCATG+TGG - chr2_1:19474519-19474538 Msa0200000:CDS 40.0%
CACTTCCCATTTATCGTACA+TGG + chr2_1:19474564-19474583 None:intergenic 40.0%
AACACCGTTATTGATGCTGA+CGG - chr2_1:19474615-19474634 Msa0200000:CDS 40.0%
GTAACCGTCAGCATCAATAA+CGG + chr2_1:19474622-19474641 None:intergenic 40.0%
GTTACCCTGTTTACAGAAGA+AGG - chr2_1:19474637-19474656 Msa0200000:intron 40.0%
TGTCCCTTCTTCTGTAAACA+GGG + chr2_1:19474644-19474663 None:intergenic 40.0%
TTGTCCCTTCTTCTGTAAAC+AGG + chr2_1:19474645-19474664 None:intergenic 40.0%
GTTTACAGAAGAAGGGACAA+TGG - chr2_1:19474645-19474664 Msa0200000:intron 40.0%
! GCATCAATTGTGGGTTGTAT+GGG + chr2_1:19474719-19474738 None:intergenic 40.0%
! AGCATCAATTGTGGGTTGTA+TGG + chr2_1:19474720-19474739 None:intergenic 40.0%
AAATGGTCACCAAGACAAAG+AGG - chr2_1:19475170-19475189 Msa0200000:CDS 40.0%
ACTGATACACCTCTTTGTCT+TGG + chr2_1:19475182-19475201 None:intergenic 40.0%
! AGACAAAGAGGTGTATCAGT+TGG - chr2_1:19475182-19475201 Msa0200000:CDS 40.0%
! AAAGAGGTGTATCAGTTGGA+AGG - chr2_1:19475186-19475205 Msa0200000:CDS 40.0%
! CAAATACGACTCCTTTAAGG+AGG - chr2_1:19475316-19475335 Msa0200000:CDS 40.0%
CCAAAATGATGCCTGGTTAA+TGG + chr2_1:19475390-19475409 None:intergenic 40.0%
! CCATTAACCAGGCATCATTT+TGG - chr2_1:19475387-19475406 Msa0200000:CDS 40.0%
! AGGTAGTGTGGTCTAAAACA+TGG - chr2_1:19475477-19475496 Msa0200000:CDS 40.0%
! GGTAGTGTGGTCTAAAACAT+GGG - chr2_1:19475478-19475497 Msa0200000:CDS 40.0%
TATCATCTCCATTGTATGCG+AGG - chr2_1:19475749-19475768 Msa0200000:intron 40.0%
AAAGATGACCTCGCATACAA+TGG + chr2_1:19475760-19475779 None:intergenic 40.0%
GTCCCACGGAAAAAATTTCA+AGG - chr2_1:19475896-19475915 Msa0200000:CDS 40.0%
!!! GGTCCTTGAAATTTTTTCCG+TGG + chr2_1:19475902-19475921 None:intergenic 40.0%
ACATCAGTTCTTGGCATAGA+CGG + chr2_1:19475930-19475949 None:intergenic 40.0%
GATGTCGCTATAAATAGTGC+TGG - chr2_1:19475945-19475964 Msa0200000:CDS 40.0%
! CATTGAAAGAGGAGCATGAT+CGG - chr2_1:19476012-19476031 Msa0200000:CDS 40.0%
TCATCTGCATTGAGATCCAA+AGG - chr2_1:19476170-19476189 Msa0200000:CDS 40.0%
AGGAGAAATTGTCCTAACAG+TGG - chr2_1:19476190-19476209 Msa0200000:CDS 40.0%
ATAGCAGCACTTCTTATTCC+AGG - chr2_1:19476224-19476243 Msa0200000:CDS 40.0%
! AATTGCCCCAATGGACTTAA+TGG + chr2_1:19476320-19476339 None:intergenic 40.0%
!! GATGCACAGACATTGTTTTG+AGG - chr2_1:19476382-19476401 Msa0200000:intron 40.0%
ACCGTGCAAAAGTCTCATAT+TGG + chr2_1:19476594-19476613 None:intergenic 40.0%
ACTATGGATAAGTAGGTCGT+CGG + chr2_1:19476726-19476745 None:intergenic 40.0%
GACCTACTTATCCATAGTTC+AGG - chr2_1:19476728-19476747 Msa0200000:intron 40.0%
CACCTGAACTATGGATAAGT+AGG + chr2_1:19476733-19476752 None:intergenic 40.0%
CAACATGATCACCTGAACTA+TGG + chr2_1:19476742-19476761 None:intergenic 40.0%
TGTTAGCAACAGTACTACTG+GGG + chr2_1:19476940-19476959 None:intergenic 40.0%
CTGTTAGCAACAGTACTACT+GGG + chr2_1:19476941-19476960 None:intergenic 40.0%
!! ATAAATGCTGGCTTGTGCAA+TGG - chr2_1:19477076-19477095 Msa0200000:intron 40.0%
GTGATTTCAGGAAGCAACAT+TGG - chr2_1:19477148-19477167 Msa0200000:CDS 40.0%
GATTTCAGGAAGCAACATTG+GGG - chr2_1:19477150-19477169 Msa0200000:CDS 40.0%
GAAGGTTGCAATGATAGTCT+AGG + chr2_1:19477190-19477209 None:intergenic 40.0%
AACGGAATTCTAGTGTCTGA+AGG + chr2_1:19477208-19477227 None:intergenic 40.0%
TAATGGGAAATTGCCTACGT+TGG + chr2_1:19477237-19477256 None:intergenic 40.0%
! GGTAAAAGGCGCAAAACCAA+CGG - chr2_1:19471521-19471540 Msa0200000:CDS 45.0%
AATTCTGTGACCATTGCCGT+TGG + chr2_1:19471540-19471559 None:intergenic 45.0%
! TATTGATTGGAAACTGCCGG+CGG + chr2_1:19471587-19471606 None:intergenic 45.0%
AGATTGAACCCCCTCATGAT+TGG - chr2_1:19471821-19471840 Msa0200000:CDS 45.0%
GCGCAATCAAACCAATCATG+AGG + chr2_1:19471835-19471854 None:intergenic 45.0%
TTTGCTTCCCACAGAAGACA+TGG - chr2_1:19471974-19471993 Msa0200000:CDS 45.0%
ATCACCTCCATGTCTTCTGT+GGG + chr2_1:19471984-19472003 None:intergenic 45.0%
ATTGATTGGAAATTGCCGGC+GGG + chr2_1:19472097-19472116 None:intergenic 45.0%
GGAACCGCAGTATGTTTGTA+AGG - chr2_1:19472699-19472718 Msa0200000:CDS 45.0%
TACAACTCATGCAGGGATTG+AGG + chr2_1:19472844-19472863 None:intergenic 45.0%
! TAGGCAACAAACCACCGATT+TGG + chr2_1:19473020-19473039 None:intergenic 45.0%
!! GTGGTTTGTTGCCTAAACCA+GGG - chr2_1:19473025-19473044 Msa0200000:CDS 45.0%
!! TGGTTTGTTGCCTAAACCAG+GGG - chr2_1:19473026-19473045 Msa0200000:CDS 45.0%
!! TTAGGTTGATCCCCTGGTTT+AGG + chr2_1:19473039-19473058 None:intergenic 45.0%
TAACGAAACTCGCAATCGGA+TGG - chr2_1:19473089-19473108 Msa0200000:CDS 45.0%
TTAGGCAAAAGGGGATACGA+TGG - chr2_1:19473474-19473493 Msa0200000:CDS 45.0%
TAATGCACCAACTGCATCAG+AGG - chr2_1:19473506-19473525 Msa0200000:CDS 45.0%
ATATTCTCTCGCGGTGAAGA+TGG - chr2_1:19473660-19473679 Msa0200000:CDS 45.0%
TTAGCATGATCGAGTCTTGG+CGG - chr2_1:19473850-19473869 Msa0200000:CDS 45.0%
TCGAGTCTTGGCGGTTAAAA+TGG - chr2_1:19473859-19473878 Msa0200000:CDS 45.0%
ATGGCGATATGTTCTTGGGT+TGG - chr2_1:19474044-19474063 Msa0200000:CDS 45.0%
TACATGCAACCACAAATGGC+CGG - chr2_1:19474091-19474110 Msa0200000:CDS 45.0%
! ACAATTTGAAGCCAGCAGAC+AGG - chr2_1:19474138-19474157 Msa0200000:CDS 45.0%
CATAGAAGGAAGCAGTGACT+CGG + chr2_1:19474830-19474849 None:intergenic 45.0%
ACTGCTTCCTTCTATGGATC+TGG - chr2_1:19474834-19474853 Msa0200000:CDS 45.0%
! TCTTGGTGACCATTTGCGTT+GGG + chr2_1:19475165-19475184 None:intergenic 45.0%
! AGGATTCATTTTGTGCCACC+AGG - chr2_1:19475206-19475225 Msa0200000:CDS 45.0%
! GGATTCATTTTGTGCCACCA+GGG - chr2_1:19475207-19475226 Msa0200000:CDS 45.0%
TAAAATTTCTCCCCAGACCC+TGG + chr2_1:19475227-19475246 None:intergenic 45.0%
TTGCTTCGCATTGGGTTTGT+TGG - chr2_1:19475340-19475359 Msa0200000:CDS 45.0%
!! GTTTTAGACCACACTACCTC+TGG + chr2_1:19475476-19475495 None:intergenic 45.0%
CACGGCACAATTTCACAGTA+TGG - chr2_1:19475641-19475660 Msa0200000:CDS 45.0%
CGTCTAGCTGAAGATCTGTA+TGG + chr2_1:19475827-19475846 None:intergenic 45.0%
GAAAAGCTACTACAGTCCCA+CGG - chr2_1:19475882-19475901 Msa0200000:CDS 45.0%
TTCTTGGCATAGACGGATAG+TGG + chr2_1:19475923-19475942 None:intergenic 45.0%
!! CACTATAATGGGCAGAGTTG+AGG - chr2_1:19476076-19476095 Msa0200000:CDS 45.0%
ATATATGGGTACGGTGGTAC+AGG - chr2_1:19476122-19476141 Msa0200000:CDS 45.0%
CAGCACTTCTTATTCCAGGT+GGG - chr2_1:19476228-19476247 Msa0200000:CDS 45.0%
CGCAATATCAATTGCCCCAA+TGG + chr2_1:19476329-19476348 None:intergenic 45.0%
AGGCTGTTGATCGTAGTTTC+CGG - chr2_1:19476402-19476421 Msa0200000:intron 45.0%
TTTCCGGGATGTATGCAAAG+CGG - chr2_1:19476418-19476437 Msa0200000:intron 45.0%
TGCAAAGCGGACATTCCATT+CGG - chr2_1:19476431-19476450 Msa0200000:CDS 45.0%
! TCGTTCTAGGTGGTGACTTT+CGG - chr2_1:19476465-19476484 Msa0200000:CDS 45.0%
CTTTCGGCAAATTCTACCAG+TGG - chr2_1:19476481-19476500 Msa0200000:CDS 45.0%
GCATCAATTCATCACGTCTC+TGG - chr2_1:19476540-19476559 Msa0200000:intron 45.0%
TATGGATAAGTAGGTCGTCG+GGG + chr2_1:19476724-19476743 None:intergenic 45.0%
CTATGGATAAGTAGGTCGTC+GGG + chr2_1:19476725-19476744 None:intergenic 45.0%
CCTGTTAGCAACAGTACTAC+TGG + chr2_1:19476942-19476961 None:intergenic 45.0%
CCAGTAGTACTGTTGCTAAC+AGG - chr2_1:19476939-19476958 Msa0200000:CDS 45.0%
TCTGGTGTGTGAACATCATC+AGG + chr2_1:19476965-19476984 None:intergenic 45.0%
GAGTTCCAGTTATGTTGCTG+AGG - chr2_1:19477044-19477063 Msa0200000:intron 45.0%
TTGGAAGGAAGGGTGATTTC+AGG - chr2_1:19477136-19477155 Msa0200000:CDS 45.0%
! TTCCGTTCAAGTTCCAACGT+AGG - chr2_1:19477221-19477240 Msa0200000:intron 45.0%
TGCCTACGTTGGAACTTGAA+CGG + chr2_1:19477226-19477245 None:intergenic 45.0%
ATTGATTGGAAACTGCCGGC+GGG + chr2_1:19471586-19471605 None:intergenic 50.0%
CATCACCTCCATGTCTTCTG+TGG + chr2_1:19471985-19472004 None:intergenic 50.0%
CACAGAAGACATGGAGGTGA+TGG - chr2_1:19471983-19472002 Msa0200000:CDS 50.0%
AAAGGGACAAGATGCAGGAG+AGG - chr2_1:19472026-19472045 Msa0200000:CDS 50.0%
CTATGTGCTGCATGCAAGGA+AGG - chr2_1:19472791-19472810 Msa0200000:CDS 50.0%
ACTCATGCAGGGATTGAGGT+AGG + chr2_1:19472840-19472859 None:intergenic 50.0%
!! GCAACAAACCACCGATTTGG+TGG + chr2_1:19473017-19473036 None:intergenic 50.0%
!! GGTGGTTTGTTGCCTAAACC+AGG - chr2_1:19473024-19473043 Msa0200000:CDS 50.0%
!! GCAAACTTAGGTTGATCCCC+TGG + chr2_1:19473045-19473064 None:intergenic 50.0%
GCAAAAGGGGATACGATGGT+CGG - chr2_1:19473478-19473497 Msa0200000:CDS 50.0%
! ATGATGCAGCGGATTTCGAG+AGG - chr2_1:19473553-19473572 Msa0200000:CDS 50.0%
! TGATGCAGCGGATTTCGAGA+GGG - chr2_1:19473554-19473573 Msa0200000:CDS 50.0%
CAGCAGAGGGTCAATGATCA+AGG - chr2_1:19473777-19473796 Msa0200000:CDS 50.0%
AGGCGAGGACAATCCAAGTT+CGG - chr2_1:19473947-19473966 Msa0200000:CDS 50.0%
GAGGACAATCCAAGTTCGGT+GGG - chr2_1:19473951-19473970 Msa0200000:CDS 50.0%
! AGGACAATCCAAGTTCGGTG+GGG - chr2_1:19473952-19473971 Msa0200000:CDS 50.0%
! ATCCAAGTTCGGTGGGGAAA+AGG - chr2_1:19473958-19473977 Msa0200000:CDS 50.0%
! TCCAAGTTCGGTGGGGAAAA+GGG - chr2_1:19473959-19473978 Msa0200000:CDS 50.0%
AAAGGGTTGTGTTACCCGCA+AGG - chr2_1:19473976-19473995 Msa0200000:CDS 50.0%
GTGTTACCCGCAAGGTTTGT+CGG - chr2_1:19473984-19474003 Msa0200000:CDS 50.0%
AAACCATCTCCGGCCATTTG+TGG + chr2_1:19474103-19474122 None:intergenic 50.0%
CGAGTCACTGCTTCCTTCTA+TGG - chr2_1:19474828-19474847 Msa0200000:CDS 50.0%
GTCGGAACCAGATCCATAGA+AGG + chr2_1:19474844-19474863 None:intergenic 50.0%
TGTCTGCATGTGAAGCTGTG+TGG - chr2_1:19474904-19474923 Msa0200000:CDS 50.0%
! GTCTTGGTGACCATTTGCGT+TGG + chr2_1:19475166-19475185 None:intergenic 50.0%
! ATTTTGTGCCACCAGGGTCT+GGG - chr2_1:19475213-19475232 Msa0200000:CDS 50.0%
TGCGAAGCAAGCCTCCTTAA+AGG + chr2_1:19475330-19475349 None:intergenic 50.0%
! TAAGGAGGCTTGCTTCGCAT+TGG - chr2_1:19475331-19475350 Msa0200000:CDS 50.0%
! AAGGAGGCTTGCTTCGCATT+GGG - chr2_1:19475332-19475351 Msa0200000:CDS 50.0%
AAATCAATTTGCGCGGCCAG+AGG - chr2_1:19475457-19475476 Msa0200000:CDS 50.0%
GAACACGCAAGATGCGTCTT+TGG + chr2_1:19475532-19475551 None:intergenic 50.0%
TACCACTTGACGCCACTGTT+AGG + chr2_1:19476205-19476224 None:intergenic 50.0%
GCAGCACTTCTTATTCCAGG+TGG - chr2_1:19476227-19476246 Msa0200000:CDS 50.0%
GGCTGTTGATCGTAGTTTCC+GGG - chr2_1:19476403-19476422 Msa0200000:intron 50.0%
TGTCCGCTTTGCATACATCC+CGG + chr2_1:19476424-19476443 None:intergenic 50.0%
AAAGCGGACATTCCATTCGG+AGG - chr2_1:19476434-19476453 Msa0200000:CDS 50.0%
!! GCAGAATGGGTATTGGGCAT+TGG - chr2_1:19476650-19476669 Msa0200000:CDS 50.0%
!! TGGGTATTGGGCATTGGTGA+TGG - chr2_1:19476656-19476675 Msa0200000:CDS 50.0%
!! GGCATTGGTGATGGTGTTGT+TGG - chr2_1:19476665-19476684 Msa0200000:CDS 50.0%
GTTGGAGACGCATGTGATGA+TGG - chr2_1:19476683-19476702 Msa0200000:CDS 50.0%
AGGAAGCAACATTGGGGACA+AGG - chr2_1:19477156-19477175 Msa0200000:CDS 50.0%
GAGAGAACACAGATTGCGGT+AGG + chr2_1:19477324-19477343 None:intergenic 50.0%
CCGTGAGAGAACACAGATTG+CGG + chr2_1:19477328-19477347 None:intergenic 50.0%
CCGCAATCTGTGTTCTCTCA+CGG - chr2_1:19477325-19477344 Msa0200000:intron 50.0%
TCCAGGGTGACATCAAGGAA+AGG - chr2_1:19477367-19477386 Msa0200000:CDS 50.0%
ACCTTTCCTTGATGTCACCC+TGG + chr2_1:19477371-19477390 None:intergenic 50.0%
AGGCGCAAAACCAACGGCAA+TGG - chr2_1:19471527-19471546 Msa0200000:CDS 55.0%
GCTTCCCACAGAAGACATGG+AGG - chr2_1:19471977-19471996 Msa0200000:CDS 55.0%
GATTGAGGTAGGCTGGCGAA+TGG + chr2_1:19472829-19472848 None:intergenic 55.0%
ATGCAGGGATTGAGGTAGGC+TGG + chr2_1:19472836-19472855 None:intergenic 55.0%
! GGGCGCCTTGCCATTGTTTT+TGG + chr2_1:19472965-19472984 None:intergenic 55.0%
GCTGCTACCTCTGATGCAGT+TGG + chr2_1:19473516-19473535 None:intergenic 55.0%
TGCATCAGAGGTAGCAGCCT+TGG - chr2_1:19473518-19473537 Msa0200000:CDS 55.0%
GAGGTAGCAGCCTTGGTTGT+AGG - chr2_1:19473525-19473544 Msa0200000:CDS 55.0%
!! TGAAGCACTGCTTAGAGGCG+AGG - chr2_1:19473932-19473951 Msa0200000:CDS 55.0%
CGAGGACAATCCAAGTTCGG+TGG - chr2_1:19473950-19473969 Msa0200000:CDS 55.0%
! ACCCTTTTCCCCACCGAACT+TGG + chr2_1:19473963-19473982 None:intergenic 55.0%
TTACCCGCAAGGTTTGTCGG+CGG - chr2_1:19473987-19474006 Msa0200000:CDS 55.0%
CAACCACAAATGGCCGGAGA+TGG - chr2_1:19474097-19474116 Msa0200000:CDS 55.0%
!! GGAAAGCGTCCCAACGCAAA+TGG - chr2_1:19475153-19475172 Msa0200000:CDS 55.0%
! CATTTTGTGCCACCAGGGTC+TGG - chr2_1:19475212-19475231 Msa0200000:CDS 55.0%
! TTTTGTGCCACCAGGGTCTG+GGG - chr2_1:19475214-19475233 Msa0200000:CDS 55.0%
AATTTCTCCCCAGACCCTGG+TGG + chr2_1:19475224-19475243 None:intergenic 55.0%
CGGTTCCCCAAAATGATGCC+TGG + chr2_1:19475397-19475416 None:intergenic 55.0%
AGACGCATCTTGCGTGTTCC+AGG - chr2_1:19475533-19475552 Msa0200000:CDS 55.0%
GTCCTAACAGTGGCGTCAAG+TGG - chr2_1:19476200-19476219 Msa0200000:CDS 55.0%
GAATGAGCAGTTCTCCCACC+TGG + chr2_1:19476245-19476264 None:intergenic 55.0%
GTGGGAGAACTGCTCATTCC+AGG - chr2_1:19476246-19476265 Msa0200000:CDS 55.0%
GGACATTCCATTCGGAGGCA+AGG - chr2_1:19476439-19476458 Msa0200000:CDS 55.0%
ACGACAACCTTGCCTCCGAA+TGG + chr2_1:19476449-19476468 None:intergenic 55.0%
GGAGGCAAGGTTGTCGTTCT+AGG - chr2_1:19476452-19476471 Msa0200000:CDS 55.0%
! GGCAAGGTTGTCGTTCTAGG+TGG - chr2_1:19476455-19476474 Msa0200000:CDS 55.0%
GCAACAGTACTACTGGGGCA+AGG + chr2_1:19476935-19476954 None:intergenic 55.0%
CAGTCTCCAGGGTGACATCA+AGG - chr2_1:19477362-19477381 Msa0200000:intron 55.0%
ATGCCCAGAAGACATCCCGC+CGG - chr2_1:19471568-19471587 Msa0200000:CDS 60.0%
ATGCCCAATAGACGTCCCGC+CGG - chr2_1:19472079-19472098 Msa0200000:CDS 60.0%
TTGCCGGCGGGACGTCTATT+GGG + chr2_1:19472085-19472104 None:intergenic 60.0%
ATTGCCGGCGGGACGTCTAT+TGG + chr2_1:19472086-19472105 None:intergenic 60.0%
GCAATCGGATGGCATCCGTG+AGG - chr2_1:19473100-19473119 Msa0200000:CDS 60.0%
TGCACCGCCGACAAACCTTG+CGG + chr2_1:19473994-19474013 None:intergenic 60.0%
ACCAAGTCTGGCCTGTCTGC+TGG + chr2_1:19474152-19474171 None:intergenic 60.0%
!! AGGAAGCAGTGACTCGGTCG+TGG + chr2_1:19474824-19474843 None:intergenic 60.0%
CTGCCGGCGGGATGTCTTCT+GGG + chr2_1:19471574-19471593 None:intergenic 65.0%
ACTGCCGGCGGGATGTCTTC+TGG + chr2_1:19471575-19471594 None:intergenic 65.0%
GCACCGCCGACAAACCTTGC+GGG + chr2_1:19473993-19474012 None:intergenic 65.0%
GCCAGCAGACAGGCCAGACT+TGG - chr2_1:19474148-19474167 Msa0200000:CDS 65.0%
TTGCGCGGCCAGAGGTAGTG+TGG - chr2_1:19475465-19475484 Msa0200000:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 19471512 19477477 19471512 ID=Msa0200000;Name=Msa0200000
chr2_1 mRNA 19471512 19477477 19471512 ID=Msa0200000-mRNA-1;Parent=Msa0200000;Name=Msa0200000-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.44|1|1|9|0|1608
chr2_1 exon 19477366 19477477 19477366 ID=Msa0200000-mRNA-1:exon:8147;Parent=Msa0200000-mRNA-1
chr2_1 exon 19477094 19477225 19477094 ID=Msa0200000-mRNA-1:exon:8146;Parent=Msa0200000-mRNA-1
chr2_1 exon 19476855 19477001 19476855 ID=Msa0200000-mRNA-1:exon:8145;Parent=Msa0200000-mRNA-1
chr2_1 exon 19476606 19476737 19476606 ID=Msa0200000-mRNA-1:exon:8144;Parent=Msa0200000-mRNA-1
chr2_1 exon 19476425 19476514 19476425 ID=Msa0200000-mRNA-1:exon:8143;Parent=Msa0200000-mRNA-1
chr2_1 exon 19475868 19476306 19475868 ID=Msa0200000-mRNA-1:exon:8142;Parent=Msa0200000-mRNA-1
chr2_1 exon 19474738 19475663 19474738 ID=Msa0200000-mRNA-1:exon:8141;Parent=Msa0200000-mRNA-1
chr2_1 exon 19473435 19474637 19473435 ID=Msa0200000-mRNA-1:exon:8140;Parent=Msa0200000-mRNA-1
chr2_1 exon 19471512 19473157 19471512 ID=Msa0200000-mRNA-1:exon:8139;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19477366 19477477 19477366 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19477094 19477225 19477094 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19476855 19477001 19476855 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19476606 19476737 19476606 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19476425 19476514 19476425 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19475868 19476306 19475868 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19474738 19475663 19474738 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19473435 19474637 19473435 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
chr2_1 CDS 19471512 19473157 19471512 ID=Msa0200000-mRNA-1:cds;Parent=Msa0200000-mRNA-1
Gene Sequence

>Msa0200000

ATGGAATCTGGTAAAAGGCGCAAAACCAACGGCAATGGTCACAGAATTGAAAACATATGCCCAGAAGACATCCCGCCGGCAGTTTCCAATCAATACACTTACGATAATGGAGGAGATGACGTTGATATCAACAATAGTGAAACATTATCGGATGAATTGGATGTGGATGAGATTGAACCCCCTCATGATTGGTTTGATTGCGCACAAAATAGCGAGCACTATGATGTTCCTGATAATGATTATGAAGACATGGAGGTGATGGAAAACAGCATGCAATCTAAAAAAGGGACAAGATGCAGGAGAGGAAAATTATTGGTTGAATCCGATACATACATATGCCCAATAGACGTCCCGCCGGCAATTTCCAATCAATACACTTACGATAATGAAGGAGATGACGTTGATATCAGCAATAGCGAAACACTATCGGATGAATCAGATGTGGATGAGATTGAACCCACTCATGATTGGTTTAATTGCGCGCAAAATAGCGAGCAGTATGATGTTCCTAATAATGATTATGAAAACATGGAAGTGATGGAAAACAGCATGCAATCTAAAAAAAGGACAAGACGCAGGAGAACAAAATTATTGGTTGAATCCGATACAGTTGAATATTTTGATGTTGGGGAACCGCAGTATGTTTGTAAGGATTGCAACGCATTAATGTGGTATGAAGAGAGAGCAAATAAAAGCAAGAGCACGTCAACACCAGAATTTTCTATGTGCTGCATGCAAGGAAGGATAGAGATTGCACCATTCGCCAGCCTACCTCAATCCCTGCATGAGTTGTATTTTAAAGATGATAGAAAGAGCAAATACTTTTTGGATAACATTAGATCATTTAACAGCATGTTCGCCTTCACTTCAATTGGTGCAAAGATCGATAAGACCAAAAACAATGGCAAGGCGCCCCCAGTATTTACAATGAATGGAGAAAATTACCACCAAATCGGTGGTTTGTTGCCTAAACCAGGGGATCAACCTAAGTTTGCACAATTGTATATATATGATACTGATAACGAAACTCGCAATCGGATGGCATCCGTGAGAATGGACGACGATAGAAATTCTTTGAGGTCAACTATTGTTGACGAGTTAAGGCATATGCTTGATGCCGCAAATTCATTTGTTAAGTCATATAGGTTGGTGCGAGATAAATTATTACAATCAGAAACTCCAACTGTAAAGCTACGCTTATTAGGCAAAAGGGGATACGATGGTCGGCGTTATAATGCACCAACTGCATCAGAGGTAGCAGCCTTGGTTGTAGGTGATTATGATGCAGCGGATTTCGAGAGGGACATCGTTGTTGAGTGTGTATCAGGTCTGCTCAAACGTATATCCGTTTTTGAGACATCATACTTACCGCTACAATATCCATTAATATTCTCTCGCGGTGAAGATGGTTTTCGACGAGATATTCGATTTTCGGAAAAAGAAACAAAGAATCCCATCAAAAGAATTTTTGTATCAATGAAAGAGTGGTTTGCATACAAATTGCAGCAGAGGGTCAATGATCAAGGAGCATTATTGTATTCGAGAAAGTTGTTACAACAATTTTGTTGCGATGGATTTAGCATGATCGAGTCTTGGCGGTTAAAATGGTACCGTGATCACCAAAAAGATGTTAGAGCTGATATGTACAAGGGATTATATGAAGCACTGCTTAGAGGCGAGGACAATCCAAGTTCGGTGGGGAAAAGGGTTGTGTTACCCGCAAGGTTTGTCGGCGGTGCACGTTACATGATTCAAAATTATCAAGATGCAATGGCGATATGTTCTTGGGTTGGTTATCCTGATCTTTTTATTACATTTACATGCAACCACAAATGGCCGGAGATGGTTTCATACTTAAAGAAACACAATTTGAAGCCAGCAGACAGGCCAGACTTGGTGAGCAGAATTTTTAAAATTAAACTTAATCATTTAATTCAAGAGATACGAAATGGAAAGATATTTGGCAAAGTCAAGGCAGTTATTTATACAATTGAATTTCAAAAACGAGGACTTCCTCATGCTCATATTCTGGTCTTCCTCCATCCCAATTTTCGAATTGTTCATCCAAGTAACATTGACAAAATAATATGTGCTGAAATTCCAGACAAAGAAAAAAATCCCGAGCTCTACAATATTGTCTCATCCCTTATGATACATGGACCATGTGGTGATGAAAATATTAATTCACCATGTACGATAAATGGGAAGTGTACAAAGTATTTTCCGAAAAGATATGTCGACAACACCGTTATTGATGCTGACGGTTACCCTGTTTACAGAAGAAGGGACAATGGCGTAACTGTTCAAAAAGGTGATTCATTTGCCGATAATAGGTATGTTGTCCCATACAACCCACAATTGATGCTGAAGTTTAATGCACATATTAATGTTGAATGGTGCAATCAATCACGTTCTATCAAATATTTGTTCAAGTACGTTAACAAGGGCCACGACCGAGTCACTGCTTCCTTCTATGGATCTGGTTCCGACTCTTGTGATGAAATTAAAATGTATTATGATTGTCGCTATTTGTCTGCATGTGAAGCTGTGTGGAGAATTTTTTCTTTCGATATTAATTATAGATATCCTTCTGTAGAACGATTGAGTTTTCATTTAGAAGGGGAAGAGCCTATTATATTTGAAGATGATGATGACTTAGAGGATGTTTTAAATAAACCACATATTCGTGACACAAAATTTTTGGCATGGATGGAGGCAAACAAGATATATGTCGATGCAAAAGATCTTACTTATGGGGAATTCCCATTGAAATTTACATGGAAAGCGTCCCAACGCAAATGGTCACCAAGACAAAGAGGTGTATCAGTTGGAAGGATTCATTTTGTGCCACCAGGGTCTGGGGAGAAATTTTACTTGCGCACCTTATTGAATTATGTAAAGGGCCCTACTTCTTATGATGAAATTAAAACAGTGAAAGACATCAAATACGACTCCTTTAAGGAGGCTTGCTTCGCATTGGGTTTGTTGGAAGATGACAAAGAGTTTATTGATGCCATTAACCAGGCATCATTTTGGGGAACCGCTGATTTTATGAGAAGATTATTTGTTACGTTGCTGCTTACAAATCAATTTGCGCGGCCAGAGGTAGTGTGGTCTAAAACATGGGAGAATCTAAGTGATGATATAGTGTATCGCCAAAGACGCATCTTGCGTGTTCCAGATCTTCAGCTAGACGAAGAACAAATAAAAAGCTATGCCCTTGCAGAAATTGAAAAGCTACTACAGTCCCACGGAAAAAATTTCAAGGACCACTATCCGTCTATGCCAAGAACTGATGTCGCTATAAATAGTGCTGGGCTTAATAGATTGATTTATGATGAATTGAGATACAATAAAGATTCATTGAAAGAGGAGCATGATCGGTTGATGTCAACGATGACTACTGAACAAAAAAATATTTACGACACTATAATGGGCAGAGTTGAGGCAAATAAACAAGGTTTATTTTTTATATATGGGTACGGTGGTACAGGAAAAACTTTTATTTGGAGAGCAATGTCATCTGCATTGAGATCCAAAGGAGAAATTGTCCTAACAGTGGCGTCAAGTGGTATAGCAGCACTTCTTATTCCAGGTGGGAGAACTGCTCATTCCAGGTTCCATATACCATTCATTGTTCACGAAAGTTCAACTTGCACCATTGAACCATTAAGTCCATTGGGGCAATTGATATTGCGCGCAAAACTAATAATATGGGATGAAGCGCCAATGATGCACAGACATTGTTTTGAGGCTGTTGATCGTAGTTTCCGGGATGTATGCAAAGCGGACATTCCATTCGGAGGCAAGGTTGTCGTTCTAGGTGGTGACTTTCGGCAAATTCTACCAGTGGTTCCTAAAGGAACCCGACAAGACATAATAAACGCAAGCATCAATTCATCACGTCTCTGGCGTCATTGTGAGATTTTAACACTAACTACCAATATGAGACTTTTGCACGGTTGTTCAGATGCTGATGTAGATGAATTAAAAGAATTTGCAGAATGGGTATTGGGCATTGGTGATGGTGTTGTTGGAGACGCATGTGATGATGGAATTAATGTGCATATCCCCGACGACCTACTTATCCATAGTTCAGGTGATCATGTTGCATCTATTGTCGAATGCATTTACCCATCTATTTTGCATAATATGAATGATCCAGAGTATTTTAAAAATAGAGCTATTTTAACGCCAAAAAATCTGATTGTCGAAGAAATTAACAATTATGTTATGTCTTTGATACCCGGTGAAGAAAGAACATATTTGAGTTGTGATTCACCTTGCCCCAGTAGTACTGTTGCTAACAGGCCTGATGATGTTCACACACCAGAATTTTTGAACAAAATTAATGCATCAGGTCTTCCTAACCACAAGATCACATTAAAGGTAGGAGTTCCAGTTATGTTGCTGAGGAATTTGGACATAAATGCTGGCTTGTGCAATGGAACACGATTAATCATTACAAGAATGGGAAGATATGTATTGGAAGGAAGGGTGATTTCAGGAAGCAACATTGGGGACAAGGTGTTTGTGCCTAGACTATCATTGCAACCTTCAGACACTAGAATTCCGTTCAAGTTCCAACGTAGGCAATTTCCCATTACTGTTTGTTTCGCAATGACCATTAACAAAAGTCAAGGTCAATCATTAAAACAAGTTGGCGTATACCTACCGCAATCTGTGTTCTCTCACGGCCAATTATATGTAGCAGTCTCCAGGGTGACATCAAGGAAAGGTTTGAAAATACTCATAACTGACGAAAATGGAGATTGCATTGATAACACAACAAATGTCGTATACAAGGAGGTGTTTCATAATGTATAG
Protein sequence

>Msa0200000

MESGKRRKTNGNGHRIENICPEDIPPAVSNQYTYDNGGDDVDINNSETLSDELDVDEIEPPHDWFDCAQNSEHYDVPDNDYEDMEVMENSMQSKKGTRCRRGKLLVESDTYICPIDVPPAISNQYTYDNEGDDVDISNSETLSDESDVDEIEPTHDWFNCAQNSEQYDVPNNDYENMEVMENSMQSKKRTRRRRTKLLVESDTVEYFDVGEPQYVCKDCNALMWYEERANKSKSTSTPEFSMCCMQGRIEIAPFASLPQSLHELYFKDDRKSKYFLDNIRSFNSMFAFTSIGAKIDKTKNNGKAPPVFTMNGENYHQIGGLLPKPGDQPKFAQLYIYDTDNETRNRMASVRMDDDRNSLRSTIVDELRHMLDAANSFVKSYRLVRDKLLQSETPTVKLRLLGKRGYDGRRYNAPTASEVAALVVGDYDAADFERDIVVECVSGLLKRISVFETSYLPLQYPLIFSRGEDGFRRDIRFSEKETKNPIKRIFVSMKEWFAYKLQQRVNDQGALLYSRKLLQQFCCDGFSMIESWRLKWYRDHQKDVRADMYKGLYEALLRGEDNPSSVGKRVVLPARFVGGARYMIQNYQDAMAICSWVGYPDLFITFTCNHKWPEMVSYLKKHNLKPADRPDLVSRIFKIKLNHLIQEIRNGKIFGKVKAVIYTIEFQKRGLPHAHILVFLHPNFRIVHPSNIDKIICAEIPDKEKNPELYNIVSSLMIHGPCGDENINSPCTINGKCTKYFPKRYVDNTVIDADGYPVYRRRDNGVTVQKGDSFADNRYVVPYNPQLMLKFNAHINVEWCNQSRSIKYLFKYVNKGHDRVTASFYGSGSDSCDEIKMYYDCRYLSACEAVWRIFSFDINYRYPSVERLSFHLEGEEPIIFEDDDDLEDVLNKPHIRDTKFLAWMEANKIYVDAKDLTYGEFPLKFTWKASQRKWSPRQRGVSVGRIHFVPPGSGEKFYLRTLLNYVKGPTSYDEIKTVKDIKYDSFKEACFALGLLEDDKEFIDAINQASFWGTADFMRRLFVTLLLTNQFARPEVVWSKTWENLSDDIVYRQRRILRVPDLQLDEEQIKSYALAEIEKLLQSHGKNFKDHYPSMPRTDVAINSAGLNRLIYDELRYNKDSLKEEHDRLMSTMTTEQKNIYDTIMGRVEANKQGLFFIYGYGGTGKTFIWRAMSSALRSKGEIVLTVASSGIAALLIPGGRTAHSRFHIPFIVHESSTCTIEPLSPLGQLILRAKLIIWDEAPMMHRHCFEAVDRSFRDVCKADIPFGGKVVVLGGDFRQILPVVPKGTRQDIINASINSSRLWRHCEILTLTTNMRLLHGCSDADVDELKEFAEWVLGIGDGVVGDACDDGINVHIPDDLLIHSSGDHVASIVECIYPSILHNMNDPEYFKNRAILTPKNLIVEEINNYVMSLIPGEERTYLSCDSPCPSSTVANRPDDVHTPEFLNKINASGLPNHKITLKVGVPVMLLRNLDINAGLCNGTRLIITRMGRYVLEGRVISGSNIGDKVFVPRLSLQPSDTRIPFKFQRRQFPITVCFAMTINKSQGQSLKQVGVYLPQSVFSHGQLYVAVSRVTSRKGLKILITDENGDCIDNTTNVVYKEVFHNV*