AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523050 MtrunA17_Chr3g0142871 97.554 654 15 1 10 663 1 653 0.0 1309
Msa0523050 MtrunA17_Chr7g0269901 96.942 654 19 1 10 663 1 653 0.0 1305
Msa0523050 MtrunA17_Chr3g0142891 83.712 264 35 2 402 663 1 258 6.80e-145 421
Msa0523050 MtrunA17_Chr8g0383991 29.439 214 95 3 452 662 140 300 6.85e-21 94.0
Msa0523050 MtrunA17_Chr4g0061421 30.380 237 113 9 107 306 9 230 3.21e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523050 AT3G11450.1 63.788 660 211 11 13 663 7 647 0.0 733
Msa0523050 AT5G06110.1 59.342 669 240 10 11 660 5 660 0.0 711
Msa0523050 AT5G06110.2 59.342 669 240 10 11 660 5 660 0.0 711
Msa0523050 AT5G45420.2 31.959 194 87 3 468 661 158 306 6.61e-19 88.6
Msa0523050 AT5G45420.1 31.959 194 87 3 468 661 158 306 6.61e-19 88.6
Msa0523050 AT5G45420.3 31.959 194 87 3 468 661 158 306 6.61e-19 88.6
Msa0523050 AT1G74250.1 29.167 240 117 6 107 306 12 238 7.83e-16 81.6

Find 133 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTCTTTGCCATATATT+TGG 0.137476 3_4:-76397904 None:intergenic
TCCTTTCTTCTTAGTATTCT+AGG 0.180384 3_4:-76397846 None:intergenic
TTTCTCCTCTTCAGCAATTC+TGG 0.180978 3_4:-76397943 None:intergenic
GCAAGATCATTATGCATTAT+TGG 0.181634 3_4:+76397251 Msa0523050:CDS
CCATGATGAAGGAAAATTTC+AGG 0.207011 3_4:+76398888 Msa0523050:CDS
CCATCTCCTTGAAGTTCCTT+TGG 0.238251 3_4:-76398396 None:intergenic
CTTTGGCTGTATCGGGCTTC+TGG 0.244533 3_4:-76398493 None:intergenic
CATCTCTGGTTAGCTTCCTT+TGG 0.256785 3_4:-76398806 None:intergenic
CAAGATCATTATGCATTATT+GGG 0.286954 3_4:+76397252 Msa0523050:CDS
ATCTAATTGTCTTCCGGTTA+AGG 0.327275 3_4:+76397041 Msa0523050:CDS
AGCTGAGAAGAAAAGGAAAA+AGG 0.327832 3_4:+76397878 Msa0523050:CDS
ATTGTCAACTAGAGAAGAAT+TGG 0.337451 3_4:+76398571 Msa0523050:CDS
TCATATTTCAACGCCTTAAC+CGG 0.338185 3_4:-76397054 None:intergenic
GAGAAAAGTAATCAACAAAA+TGG 0.344685 3_4:+76398260 Msa0523050:CDS
CATCTCCTTGAAGTTCCTTT+GGG 0.350239 3_4:-76398395 None:intergenic
GTGATGATAAGTCTTCAATA+AGG 0.351674 3_4:+76397619 Msa0523050:CDS
CTGAATCCCGAGATCATAAA+AGG 0.353541 3_4:+76397727 Msa0523050:CDS
ATCTCTGGTTAGCTTCCTTT+GGG 0.356444 3_4:-76398805 None:intergenic
CGAGTAGCTGCAGCTGTACC+TGG 0.359607 3_4:+76398833 Msa0523050:CDS
TACTCACAAGAGCTTGTAGA+TGG 0.365954 3_4:+76397000 Msa0523050:CDS
TGTTTCATCTAATTGTCTTC+CGG 0.373042 3_4:+76397035 Msa0523050:CDS
AATGGCTATGTCAAGGCTAA+TGG 0.383665 3_4:+76398278 Msa0523050:CDS
CTTCTGTTGCAAAGCAGCTT+CGG 0.407096 3_4:-76397997 None:intergenic
CAGCTACTCGTTCCCATCTC+TGG 0.408539 3_4:-76398820 None:intergenic
CCTTTCTTCTTAGTATTCTA+GGG 0.408944 3_4:-76397845 None:intergenic
AGGCAAAAGCTGAGAAGAAA+AGG 0.413153 3_4:+76397871 Msa0523050:CDS
TTGTTGATAATGCTTATAAG+AGG 0.415278 3_4:+76397820 Msa0523050:CDS
AGCAAGAGCAAGAAGAAATC+TGG 0.416590 3_4:+76397210 Msa0523050:CDS
ATTCTTCTCTAGTTGACAAT+GGG 0.419152 3_4:-76398568 None:intergenic
TCATCACCTAGAGATGGAAT+TGG 0.419175 3_4:-76397603 None:intergenic
GAAGAATGTGGTTGAAGATA+AGG 0.419917 3_4:+76397155 Msa0523050:CDS
CTGCTTGTTGCTGTCGGTAC+CGG 0.420172 3_4:-76398692 None:intergenic
TCAAAAGCTTTGGCTGTATC+GGG 0.425452 3_4:-76398500 None:intergenic
CAAGACTTCTACAAGGTGTT+TGG 0.427058 3_4:+76397540 Msa0523050:CDS
GCTGCTGCACTTAAACTTCT+CGG 0.428929 3_4:+76397099 Msa0523050:CDS
AACTTCCTTGAGGTTTCATC+CGG 0.430850 3_4:+76397332 Msa0523050:CDS
TTTGGTATTCCTTTAAAAGC+TGG 0.431430 3_4:+76397664 Msa0523050:CDS
GAGGTTTCATCCGGACAAAC+AGG 0.431529 3_4:+76397341 Msa0523050:CDS
GAGATTGAGCTATTGAGAAA+AGG 0.438019 3_4:+76398359 Msa0523050:CDS
ATCAAAAGCTTTGGCTGTAT+CGG 0.439665 3_4:-76398501 None:intergenic
CAAATATATGGCAAAGAAGT+TGG 0.442593 3_4:+76397905 Msa0523050:CDS
AAGAAATGTATCAAAAGCTT+TGG 0.451091 3_4:-76398510 None:intergenic
ATTTGATATCGAACAATTGA+GGG 0.453929 3_4:+76398148 Msa0523050:CDS
CATTTGATATCGAACAATTG+AGG 0.454216 3_4:+76398147 Msa0523050:CDS
CCAAAGGAACTTCAAGGAGA+TGG 0.456430 3_4:+76398396 Msa0523050:CDS
CTTCGCAGCTTCAGTTTGCT+CGG 0.456856 3_4:-76397379 None:intergenic
CCAACACTGCATAAGCCTCT+TGG 0.462398 3_4:-76397443 None:intergenic
GATGCAATTGATTGTGCTGC+AGG 0.463598 3_4:-76398545 None:intergenic
ACAGCAGCAGCCTGTTTGTC+CGG 0.463811 3_4:-76397351 None:intergenic
CAAGATCAAACTCATCAGCC+TGG 0.467623 3_4:-76397698 None:intergenic
AGAGGCGTGGTCTGCAGTGC+AGG 0.469414 3_4:+76398751 Msa0523050:CDS
CTGGTTAGCTTCCTTTGGGA+AGG 0.471179 3_4:-76398801 None:intergenic
GTCGTCGTCATCGTCGGTGT+TGG 0.475726 3_4:-76398656 None:intergenic
TGATGATAAGTCTTCAATAA+GGG 0.479805 3_4:+76397620 Msa0523050:CDS
TTGTTGGCCAGCCTCCATAA+TGG 0.482363 3_4:+76396948 Msa0523050:intron
CAAAGGAAGCTAACCAGAGA+TGG 0.482494 3_4:+76398807 Msa0523050:CDS
ATTGTTGTCGTCGTCATCGT+CGG 0.494599 3_4:-76398662 None:intergenic
TTGATACATTTCTTGAGAAG+AGG 0.495249 3_4:+76398519 Msa0523050:CDS
AGCTGCTTTGCAACAGAAGA+AGG 0.496514 3_4:+76398001 Msa0523050:CDS
CACTGGATCACGGTCTTCCC+AGG 0.497559 3_4:-76398851 None:intergenic
TCAATCTCTTCTTTAGTCCA+AGG 0.508908 3_4:-76398344 None:intergenic
AGCAGGCTACACAGAGAAGA+AGG 0.509420 3_4:+76398316 Msa0523050:CDS
CAGAGAAGAAGGAGAAACCT+TGG 0.509658 3_4:+76398327 Msa0523050:CDS
AAGATCAAACTCATCAGCCT+GGG 0.518267 3_4:-76397697 None:intergenic
AATTCTTCTCTAGTTGACAA+TGG 0.519138 3_4:-76398569 None:intergenic
CCCTAGAATACTAAGAAGAA+AGG 0.519933 3_4:+76397845 Msa0523050:CDS
CCGTAGCAAGATATCTAAGA+TGG 0.529700 3_4:-76397281 None:intergenic
CAAAGGAACTTCAAGGAGAT+GGG 0.529793 3_4:+76398397 Msa0523050:CDS
GTTGCTGTCGGTACCGGTGT+TGG 0.530623 3_4:-76398686 None:intergenic
GTTTCAGAATACATTGGCAC+TGG 0.531471 3_4:+76398425 Msa0523050:CDS
AATCAACCAATTCCATCTCT+AGG 0.533477 3_4:+76397597 Msa0523050:CDS
GCATGAAAAGAGTGACCAGC+CGG 0.535447 3_4:-76397078 None:intergenic
GGAAGCAGTAGTTCTCTAGC+AGG 0.540499 3_4:+76398299 Msa0523050:CDS
AGCGGCCAGAATTGCTGAAG+AGG 0.545593 3_4:+76397938 Msa0523050:CDS
ATCATAAAAGGTGGATGGAA+AGG 0.545814 3_4:+76397739 Msa0523050:CDS
TATGGCAAAGAAGTTGGAGG+AGG 0.545831 3_4:+76397911 Msa0523050:CDS
AGTTTCCCAAAGGAACTTCA+AGG 0.546208 3_4:+76398390 Msa0523050:CDS
CGAGCAAACTGAAGCTGCGA+AGG 0.546255 3_4:+76397380 Msa0523050:CDS
CCGAGATCATAAAAGGTGGA+TGG 0.548047 3_4:+76397734 Msa0523050:CDS
TTGATGCTGCTTGTTGCTGT+CGG 0.552607 3_4:-76398698 None:intergenic
CCAAGAGGCTTATGCAGTGT+TGG 0.555210 3_4:+76397443 Msa0523050:CDS
AATACTAAGAAGAAAGGAAG+AGG 0.556144 3_4:+76397851 Msa0523050:CDS
GCAAACTGAAGCTGCGAAGG+AGG 0.560752 3_4:+76397383 Msa0523050:CDS
CGTCCATTCCTCATAAAAGC+AGG 0.567375 3_4:-76397564 None:intergenic
TGGCTGTATCGGGCTTCTGG+AGG 0.570452 3_4:-76398490 None:intergenic
GACTTATCATCACCTAGAGA+TGG 0.570557 3_4:-76397609 None:intergenic
TATGAGGAATGGACGGTGGT+CGG 0.570845 3_4:+76397572 Msa0523050:CDS
CAACTAGAGAAGAATTGGAA+GGG 0.572911 3_4:+76398576 Msa0523050:CDS
AACACCTTGTAGAAGTCTTG+TGG 0.578361 3_4:-76397537 None:intergenic
ATCGGGCTTCTGGAGGAGAA+CGG 0.578804 3_4:-76398483 None:intergenic
TGTTGATAATGCTTATAAGA+GGG 0.580470 3_4:+76397821 Msa0523050:CDS
GAGGTTGTTTCAGAATACAT+TGG 0.584103 3_4:+76398419 Msa0523050:CDS
GGAGAAACAACGAAAAGCAG+AGG 0.585652 3_4:+76397959 Msa0523050:CDS
GAAGTTGGAGGAGGAAGAAG+CGG 0.588565 3_4:+76397920 Msa0523050:CDS
ATATATGGCAAAGAAGTTGG+AGG 0.590878 3_4:+76397908 Msa0523050:CDS
AAAGGAAGCTAACCAGAGAT+GGG 0.594916 3_4:+76398808 Msa0523050:CDS
AGCAACAAGCAGCATCAACT+CGG 0.597280 3_4:+76398703 Msa0523050:CDS
CCATCTTAGATATCTTGCTA+CGG 0.601973 3_4:+76397281 Msa0523050:CDS
AGCAAGAAGAAATCTGGTGA+CGG 0.602442 3_4:+76397216 Msa0523050:CDS
GAGTAGCTGCAGCTGTACCT+GGG 0.604010 3_4:+76398834 Msa0523050:CDS
AGTATGTGTTGTGACAAGAT+AGG 0.605889 3_4:-76398086 None:intergenic
TCAACAAAATGGCTATGTCA+AGG 0.605950 3_4:+76398271 Msa0523050:CDS
TCAACTAGAGAAGAATTGGA+AGG 0.608211 3_4:+76398575 Msa0523050:CDS
AACTAGAGAAGAATTGGAAG+GGG 0.608691 3_4:+76398577 Msa0523050:CDS
ACAGAAGAAGGTGAAAGAGA+AGG 0.608855 3_4:+76398013 Msa0523050:CDS
TCAAGGAGTTTCAGAACAAG+AGG 0.609387 3_4:+76398733 Msa0523050:CDS
GCTATCATAAAACTTCCTTG+AGG 0.611239 3_4:+76397322 Msa0523050:CDS
ACTCACAAGAGCTTGTAGAT+GGG 0.613229 3_4:+76397001 Msa0523050:CDS
CATGAAAAGAGTGACCAGCC+GGG 0.617908 3_4:-76397077 None:intergenic
CTTGTGAGTAAGTAATAAGA+CGG 0.621140 3_4:-76396987 None:intergenic
GTCTTGTGGATCACAGTCAG+TGG 0.627262 3_4:-76397523 None:intergenic
GGAATACAAAAGTTTCCCAA+AGG 0.628434 3_4:+76398380 Msa0523050:CDS
TCTTGTGGATCACAGTCAGT+GGG 0.629359 3_4:-76397522 None:intergenic
TAAGGCGTTGAAATATGACC+CGG 0.631520 3_4:+76397059 Msa0523050:CDS
ATCAACTCGGAAGACTCTCA+AGG 0.633952 3_4:+76398716 Msa0523050:CDS
AAGCTGGAGAGAGTTTCCCC+AGG 0.640812 3_4:+76397680 Msa0523050:CDS
TTTGTCCGGATGAAACCTCA+AGG 0.646808 3_4:-76397337 None:intergenic
TTTGATATCGAACAATTGAG+GGG 0.649974 3_4:+76398149 Msa0523050:CDS
TGTTTGAACAGCCATTATGG+AGG 0.649988 3_4:-76396959 None:intergenic
GACGACAACAATTCCAACAC+CGG 0.650077 3_4:+76398673 Msa0523050:CDS
TCTTAGATATCTTGCTACGG+AGG 0.651757 3_4:+76397284 Msa0523050:CDS
TGATCCACAAGACTTCTACA+AGG 0.666734 3_4:+76397533 Msa0523050:CDS
AGATCAAACTCATCAGCCTG+GGG 0.670566 3_4:-76397696 None:intergenic
GGTTTGTGTGAGAAAATCGA+AGG 0.671097 3_4:+76398170 Msa0523050:CDS
GCGTTGAAATATGACCCGGC+TGG 0.672506 3_4:+76397063 Msa0523050:CDS
TGAGAAAATCGAAGGCAAAG+AGG 0.673494 3_4:+76398178 Msa0523050:CDS
AATCCCGAGATCATAAAAGG+TGG 0.674327 3_4:+76397730 Msa0523050:CDS
TTCTTCTCTAGTTGACAATG+GGG 0.676675 3_4:-76398567 None:intergenic
GAGTTTCAGAACAAGAGGCG+TGG 0.676797 3_4:+76398738 Msa0523050:CDS
TTGCTGCTGTAAGAATCAGA+AGG 0.678587 3_4:-76397192 None:intergenic
AAGCATTATCAACAAGAGTG+CGG 0.686922 3_4:-76397812 None:intergenic
AGGAACTTCAAGGAGATGGG+AGG 0.689319 3_4:+76398400 Msa0523050:CDS
AGATGCTGATAAGAAGAATG+TGG 0.708564 3_4:+76397143 Msa0523050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTATTTGAAATTTTCTT+TGG + chr3_4:76396869-76396888 Msa0523050:intron 10.0%
!!! TAATTATTTGAAATTTTCTT+TGG + chr3_4:76396869-76396888 Msa0523050:intron 10.0%
!!! TTTATTATATTTTGATTTGC+TGG + chr3_4:76396837-76396856 Msa0523050:intron 15.0%
!!! ATCATAAATTCTTCTTTTTA+CGG - chr3_4:76397475-76397494 None:intergenic 15.0%
!!! TTTATTATATTTTGATTTGC+TGG + chr3_4:76396837-76396856 Msa0523050:intron 15.0%
!!! ATCATAAATTCTTCTTTTTA+CGG - chr3_4:76397475-76397494 None:intergenic 15.0%
!!! TTTTGATGTTTTGTGTTTTA+TGG + chr3_4:76396556-76396575 Msa0523050:intron 20.0%
!! CTATAATATGCAGTATTATT+AGG + chr3_4:76396675-76396694 Msa0523050:intron 20.0%
!! ACCATTATTGTTGAATTTAA+TGG + chr3_4:76396814-76396833 Msa0523050:intron 20.0%
!! ACCATTAAATTCAACAATAA+TGG - chr3_4:76396818-76396837 None:intergenic 20.0%
!!! ATCAGTTTTTTGTATTTTGT+TGG + chr3_4:76396932-76396951 Msa0523050:intron 20.0%
!! CAATTAGATGAAACAAAAAT+AGG - chr3_4:76397030-76397049 None:intergenic 20.0%
!!! TGAAATAGATGTTCATTTTA+AGG + chr3_4:76397416-76397435 Msa0523050:CDS 20.0%
!!! TCATAAATTCTTCTTTTTAC+GGG - chr3_4:76397474-76397493 None:intergenic 20.0%
!!! TTGATAGTTTCTACAATTTT+TGG + chr3_4:76397646-76397665 Msa0523050:CDS 20.0%
!!! TTTTGATGTTTTGTGTTTTA+TGG + chr3_4:76396556-76396575 Msa0523050:intron 20.0%
!! CTATAATATGCAGTATTATT+AGG + chr3_4:76396675-76396694 Msa0523050:intron 20.0%
!! ACCATTATTGTTGAATTTAA+TGG + chr3_4:76396814-76396833 Msa0523050:intron 20.0%
!! ACCATTAAATTCAACAATAA+TGG - chr3_4:76396818-76396837 None:intergenic 20.0%
!!! ATCAGTTTTTTGTATTTTGT+TGG + chr3_4:76396932-76396951 Msa0523050:intron 20.0%
!! CAATTAGATGAAACAAAAAT+AGG - chr3_4:76397030-76397049 None:intergenic 20.0%
!!! TGAAATAGATGTTCATTTTA+AGG + chr3_4:76397416-76397435 Msa0523050:CDS 20.0%
!!! TCATAAATTCTTCTTTTTAC+GGG - chr3_4:76397474-76397493 None:intergenic 20.0%
!!! TTGATAGTTTCTACAATTTT+TGG + chr3_4:76397646-76397665 Msa0523050:CDS 20.0%
!! GTTTTGTGTTTTATGGATTT+AGG + chr3_4:76396563-76396582 Msa0523050:intron 25.0%
!!! GTTTTTAGTTTCAGGTTATT+AGG + chr3_4:76396790-76396809 Msa0523050:intron 25.0%
!! TTGAAATTTTCTTTGGATAC+AGG + chr3_4:76396876-76396895 Msa0523050:intron 25.0%
! CAAGATCATTATGCATTATT+GGG + chr3_4:76397252-76397271 Msa0523050:CDS 25.0%
! TGATGATAAGTCTTCAATAA+GGG + chr3_4:76397620-76397639 Msa0523050:CDS 25.0%
!!! TTGTTGATAATGCTTATAAG+AGG + chr3_4:76397820-76397839 Msa0523050:CDS 25.0%
!!! TGTTGATAATGCTTATAAGA+GGG + chr3_4:76397821-76397840 Msa0523050:CDS 25.0%
! ATTTGATATCGAACAATTGA+GGG + chr3_4:76398148-76398167 Msa0523050:CDS 25.0%
! GAGAAAAGTAATCAACAAAA+TGG + chr3_4:76398260-76398279 Msa0523050:CDS 25.0%
! AAGAAATGTATCAAAAGCTT+TGG - chr3_4:76398513-76398532 None:intergenic 25.0%
!! GTTTTGTGTTTTATGGATTT+AGG + chr3_4:76396563-76396582 Msa0523050:intron 25.0%
!!! GTTTTTAGTTTCAGGTTATT+AGG + chr3_4:76396790-76396809 Msa0523050:intron 25.0%
!! TTGAAATTTTCTTTGGATAC+AGG + chr3_4:76396876-76396895 Msa0523050:intron 25.0%
! CAAGATCATTATGCATTATT+GGG + chr3_4:76397252-76397271 Msa0523050:CDS 25.0%
! TGATGATAAGTCTTCAATAA+GGG + chr3_4:76397620-76397639 Msa0523050:CDS 25.0%
!!! TTGTTGATAATGCTTATAAG+AGG + chr3_4:76397820-76397839 Msa0523050:CDS 25.0%
!!! TGTTGATAATGCTTATAAGA+GGG + chr3_4:76397821-76397840 Msa0523050:CDS 25.0%
! ATTTGATATCGAACAATTGA+GGG + chr3_4:76398148-76398167 Msa0523050:CDS 25.0%
! GAGAAAAGTAATCAACAAAA+TGG + chr3_4:76398260-76398279 Msa0523050:CDS 25.0%
! AAGAAATGTATCAAAAGCTT+TGG - chr3_4:76398513-76398532 None:intergenic 25.0%
ATGAAGTGAAATAAGAAGCT+CGG - chr3_4:76396719-76396738 None:intergenic 30.0%
!!! ACTTCTCTGTTTTTAGTTTC+AGG + chr3_4:76396782-76396801 Msa0523050:intron 30.0%
!! TTTTGTTTGAACAGCCATTA+TGG - chr3_4:76396965-76396984 None:intergenic 30.0%
CTTGTGAGTAAGTAATAAGA+CGG - chr3_4:76396990-76397009 None:intergenic 30.0%
TGTTTCATCTAATTGTCTTC+CGG + chr3_4:76397035-76397054 Msa0523050:CDS 30.0%
GCAAGATCATTATGCATTAT+TGG + chr3_4:76397251-76397270 Msa0523050:CDS 30.0%
GTGATGATAAGTCTTCAATA+AGG + chr3_4:76397619-76397638 Msa0523050:CDS 30.0%
! TTTGGTATTCCTTTAAAAGC+TGG + chr3_4:76397664-76397683 Msa0523050:CDS 30.0%
CCTTTCTTCTTAGTATTCTA+GGG - chr3_4:76397848-76397867 None:intergenic 30.0%
TCCTTTCTTCTTAGTATTCT+AGG - chr3_4:76397849-76397868 None:intergenic 30.0%
AATACTAAGAAGAAAGGAAG+AGG + chr3_4:76397851-76397870 Msa0523050:CDS 30.0%
GAAAAAGGAGTCCAAATATA+TGG + chr3_4:76397893-76397912 Msa0523050:CDS 30.0%
CAACTTCTTTGCCATATATT+TGG - chr3_4:76397907-76397926 None:intergenic 30.0%
CAAATATATGGCAAAGAAGT+TGG + chr3_4:76397905-76397924 Msa0523050:CDS 30.0%
CATTTGATATCGAACAATTG+AGG + chr3_4:76398147-76398166 Msa0523050:CDS 30.0%
TTTGATATCGAACAATTGAG+GGG + chr3_4:76398149-76398168 Msa0523050:CDS 30.0%
TTGATACATTTCTTGAGAAG+AGG + chr3_4:76398519-76398538 Msa0523050:CDS 30.0%
ATTCTTCTCTAGTTGACAAT+GGG - chr3_4:76398571-76398590 None:intergenic 30.0%
AATTCTTCTCTAGTTGACAA+TGG - chr3_4:76398572-76398591 None:intergenic 30.0%
ATTGTCAACTAGAGAAGAAT+TGG + chr3_4:76398571-76398590 Msa0523050:CDS 30.0%
GAAAAAATTTGCCATGATGA+AGG + chr3_4:76398877-76398896 Msa0523050:CDS 30.0%
ATGAAGTGAAATAAGAAGCT+CGG - chr3_4:76396719-76396738 None:intergenic 30.0%
!!! ACTTCTCTGTTTTTAGTTTC+AGG + chr3_4:76396782-76396801 Msa0523050:intron 30.0%
!! TTTTGTTTGAACAGCCATTA+TGG - chr3_4:76396965-76396984 None:intergenic 30.0%
CTTGTGAGTAAGTAATAAGA+CGG - chr3_4:76396990-76397009 None:intergenic 30.0%
TGTTTCATCTAATTGTCTTC+CGG + chr3_4:76397035-76397054 Msa0523050:CDS 30.0%
GCAAGATCATTATGCATTAT+TGG + chr3_4:76397251-76397270 Msa0523050:CDS 30.0%
GTGATGATAAGTCTTCAATA+AGG + chr3_4:76397619-76397638 Msa0523050:CDS 30.0%
! TTTGGTATTCCTTTAAAAGC+TGG + chr3_4:76397664-76397683 Msa0523050:CDS 30.0%
CCTTTCTTCTTAGTATTCTA+GGG - chr3_4:76397848-76397867 None:intergenic 30.0%
TCCTTTCTTCTTAGTATTCT+AGG - chr3_4:76397849-76397868 None:intergenic 30.0%
AATACTAAGAAGAAAGGAAG+AGG + chr3_4:76397851-76397870 Msa0523050:CDS 30.0%
GAAAAAGGAGTCCAAATATA+TGG + chr3_4:76397893-76397912 Msa0523050:CDS 30.0%
CAACTTCTTTGCCATATATT+TGG - chr3_4:76397907-76397926 None:intergenic 30.0%
CAAATATATGGCAAAGAAGT+TGG + chr3_4:76397905-76397924 Msa0523050:CDS 30.0%
CATTTGATATCGAACAATTG+AGG + chr3_4:76398147-76398166 Msa0523050:CDS 30.0%
TTTGATATCGAACAATTGAG+GGG + chr3_4:76398149-76398168 Msa0523050:CDS 30.0%
TTGATACATTTCTTGAGAAG+AGG + chr3_4:76398519-76398538 Msa0523050:CDS 30.0%
ATTCTTCTCTAGTTGACAAT+GGG - chr3_4:76398571-76398590 None:intergenic 30.0%
AATTCTTCTCTAGTTGACAA+TGG - chr3_4:76398572-76398591 None:intergenic 30.0%
ATTGTCAACTAGAGAAGAAT+TGG + chr3_4:76398571-76398590 Msa0523050:CDS 30.0%
GAAAAAATTTGCCATGATGA+AGG + chr3_4:76398877-76398896 Msa0523050:CDS 30.0%
!! GCACTTGTTTCTATCATTTG+AGG + chr3_4:76396608-76396627 Msa0523050:intron 35.0%
GGTTTGAGTGATTCAATTGA+AGG + chr3_4:76396897-76396916 Msa0523050:intron 35.0%
ATCTAATTGTCTTCCGGTTA+AGG + chr3_4:76397041-76397060 Msa0523050:CDS 35.0%
TCATATTTCAACGCCTTAAC+CGG - chr3_4:76397057-76397076 None:intergenic 35.0%
AGATGCTGATAAGAAGAATG+TGG + chr3_4:76397143-76397162 Msa0523050:CDS 35.0%
GAAGAATGTGGTTGAAGATA+AGG + chr3_4:76397155-76397174 Msa0523050:CDS 35.0%
CCATCTTAGATATCTTGCTA+CGG + chr3_4:76397281-76397300 Msa0523050:CDS 35.0%
GCTATCATAAAACTTCCTTG+AGG + chr3_4:76397322-76397341 Msa0523050:CDS 35.0%
!!! TCATTTTAAGGCAATCCAAG+AGG + chr3_4:76397428-76397447 Msa0523050:CDS 35.0%
AATCAACCAATTCCATCTCT+AGG + chr3_4:76397597-76397616 Msa0523050:CDS 35.0%
! AAACTCTCTCCAGCTTTTAA+AGG - chr3_4:76397676-76397695 None:intergenic 35.0%
ATCATAAAAGGTGGATGGAA+AGG + chr3_4:76397739-76397758 Msa0523050:CDS 35.0%
CAAAACTGTCAGAAAAAGCT+AGG + chr3_4:76397769-76397788 Msa0523050:CDS 35.0%
AAGCATTATCAACAAGAGTG+CGG - chr3_4:76397815-76397834 None:intergenic 35.0%
CCCTAGAATACTAAGAAGAA+AGG + chr3_4:76397845-76397864 Msa0523050:CDS 35.0%
AGCTGAGAAGAAAAGGAAAA+AGG + chr3_4:76397878-76397897 Msa0523050:CDS 35.0%
ATATATGGCAAAGAAGTTGG+AGG + chr3_4:76397908-76397927 Msa0523050:CDS 35.0%
AGTATGTGTTGTGACAAGAT+AGG - chr3_4:76398089-76398108 None:intergenic 35.0%
TCAACAAAATGGCTATGTCA+AGG + chr3_4:76398271-76398290 Msa0523050:CDS 35.0%
TCAATCTCTTCTTTAGTCCA+AGG - chr3_4:76398347-76398366 None:intergenic 35.0%
GAGATTGAGCTATTGAGAAA+AGG + chr3_4:76398359-76398378 Msa0523050:CDS 35.0%
GGAATACAAAAGTTTCCCAA+AGG + chr3_4:76398380-76398399 Msa0523050:CDS 35.0%
! GAGGTTGTTTCAGAATACAT+TGG + chr3_4:76398419-76398438 Msa0523050:CDS 35.0%
! ATCAAAAGCTTTGGCTGTAT+CGG - chr3_4:76398504-76398523 None:intergenic 35.0%
TTCTTCTCTAGTTGACAATG+GGG - chr3_4:76398570-76398589 None:intergenic 35.0%
TCAACTAGAGAAGAATTGGA+AGG + chr3_4:76398575-76398594 Msa0523050:CDS 35.0%
CAACTAGAGAAGAATTGGAA+GGG + chr3_4:76398576-76398595 Msa0523050:CDS 35.0%
AACTAGAGAAGAATTGGAAG+GGG + chr3_4:76398577-76398596 Msa0523050:CDS 35.0%
!! CTATTTTCAGTTGTTGTTGC+TGG - chr3_4:76398611-76398630 None:intergenic 35.0%
!! AGCTTTAAAAACCTTCCCAA+AGG + chr3_4:76398790-76398809 Msa0523050:CDS 35.0%
!!! TTTTTTCTTGCACTGGATCA+CGG - chr3_4:76398864-76398883 None:intergenic 35.0%
!!! TGGCAAATTTTTTCTTGCAC+TGG - chr3_4:76398871-76398890 None:intergenic 35.0%
! CCTGAAATTTTCCTTCATCA+TGG - chr3_4:76398891-76398910 None:intergenic 35.0%
CCATGATGAAGGAAAATTTC+AGG + chr3_4:76398888-76398907 Msa0523050:CDS 35.0%
!! GCACTTGTTTCTATCATTTG+AGG + chr3_4:76396608-76396627 Msa0523050:intron 35.0%
GGTTTGAGTGATTCAATTGA+AGG + chr3_4:76396897-76396916 Msa0523050:intron 35.0%
ATCTAATTGTCTTCCGGTTA+AGG + chr3_4:76397041-76397060 Msa0523050:CDS 35.0%
TCATATTTCAACGCCTTAAC+CGG - chr3_4:76397057-76397076 None:intergenic 35.0%
AGATGCTGATAAGAAGAATG+TGG + chr3_4:76397143-76397162 Msa0523050:CDS 35.0%
GAAGAATGTGGTTGAAGATA+AGG + chr3_4:76397155-76397174 Msa0523050:CDS 35.0%
CCATCTTAGATATCTTGCTA+CGG + chr3_4:76397281-76397300 Msa0523050:CDS 35.0%
GCTATCATAAAACTTCCTTG+AGG + chr3_4:76397322-76397341 Msa0523050:CDS 35.0%
!!! TCATTTTAAGGCAATCCAAG+AGG + chr3_4:76397428-76397447 Msa0523050:CDS 35.0%
AATCAACCAATTCCATCTCT+AGG + chr3_4:76397597-76397616 Msa0523050:CDS 35.0%
! AAACTCTCTCCAGCTTTTAA+AGG - chr3_4:76397676-76397695 None:intergenic 35.0%
ATCATAAAAGGTGGATGGAA+AGG + chr3_4:76397739-76397758 Msa0523050:CDS 35.0%
CAAAACTGTCAGAAAAAGCT+AGG + chr3_4:76397769-76397788 Msa0523050:CDS 35.0%
AAGCATTATCAACAAGAGTG+CGG - chr3_4:76397815-76397834 None:intergenic 35.0%
CCCTAGAATACTAAGAAGAA+AGG + chr3_4:76397845-76397864 Msa0523050:CDS 35.0%
AGCTGAGAAGAAAAGGAAAA+AGG + chr3_4:76397878-76397897 Msa0523050:CDS 35.0%
ATATATGGCAAAGAAGTTGG+AGG + chr3_4:76397908-76397927 Msa0523050:CDS 35.0%
AGTATGTGTTGTGACAAGAT+AGG - chr3_4:76398089-76398108 None:intergenic 35.0%
TCAACAAAATGGCTATGTCA+AGG + chr3_4:76398271-76398290 Msa0523050:CDS 35.0%
TCAATCTCTTCTTTAGTCCA+AGG - chr3_4:76398347-76398366 None:intergenic 35.0%
GAGATTGAGCTATTGAGAAA+AGG + chr3_4:76398359-76398378 Msa0523050:CDS 35.0%
GGAATACAAAAGTTTCCCAA+AGG + chr3_4:76398380-76398399 Msa0523050:CDS 35.0%
! GAGGTTGTTTCAGAATACAT+TGG + chr3_4:76398419-76398438 Msa0523050:CDS 35.0%
! ATCAAAAGCTTTGGCTGTAT+CGG - chr3_4:76398504-76398523 None:intergenic 35.0%
TTCTTCTCTAGTTGACAATG+GGG - chr3_4:76398570-76398589 None:intergenic 35.0%
TCAACTAGAGAAGAATTGGA+AGG + chr3_4:76398575-76398594 Msa0523050:CDS 35.0%
CAACTAGAGAAGAATTGGAA+GGG + chr3_4:76398576-76398595 Msa0523050:CDS 35.0%
AACTAGAGAAGAATTGGAAG+GGG + chr3_4:76398577-76398596 Msa0523050:CDS 35.0%
!! CTATTTTCAGTTGTTGTTGC+TGG - chr3_4:76398611-76398630 None:intergenic 35.0%
!! AGCTTTAAAAACCTTCCCAA+AGG + chr3_4:76398790-76398809 Msa0523050:CDS 35.0%
!!! TTTTTTCTTGCACTGGATCA+CGG - chr3_4:76398864-76398883 None:intergenic 35.0%
!!! TGGCAAATTTTTTCTTGCAC+TGG - chr3_4:76398871-76398890 None:intergenic 35.0%
! CCTGAAATTTTCCTTCATCA+TGG - chr3_4:76398891-76398910 None:intergenic 35.0%
CCATGATGAAGGAAAATTTC+AGG + chr3_4:76398888-76398907 Msa0523050:CDS 35.0%
TGTTTGAACAGCCATTATGG+AGG - chr3_4:76396962-76396981 None:intergenic 40.0%
TACTCACAAGAGCTTGTAGA+TGG + chr3_4:76397000-76397019 Msa0523050:CDS 40.0%
ACTCACAAGAGCTTGTAGAT+GGG + chr3_4:76397001-76397020 Msa0523050:CDS 40.0%
!! TAAGGCGTTGAAATATGACC+CGG + chr3_4:76397059-76397078 Msa0523050:CDS 40.0%
TTGCTGCTGTAAGAATCAGA+AGG - chr3_4:76397195-76397214 None:intergenic 40.0%
AGCAAGAGCAAGAAGAAATC+TGG + chr3_4:76397210-76397229 Msa0523050:CDS 40.0%
AGCAAGAAGAAATCTGGTGA+CGG + chr3_4:76397216-76397235 Msa0523050:CDS 40.0%
CCGTAGCAAGATATCTAAGA+TGG - chr3_4:76397284-76397303 None:intergenic 40.0%
TCTTAGATATCTTGCTACGG+AGG + chr3_4:76397284-76397303 Msa0523050:CDS 40.0%
AACTTCCTTGAGGTTTCATC+CGG + chr3_4:76397332-76397351 Msa0523050:CDS 40.0%
TGATCCACAAGACTTCTACA+AGG + chr3_4:76397533-76397552 Msa0523050:CDS 40.0%
AACACCTTGTAGAAGTCTTG+TGG - chr3_4:76397540-76397559 None:intergenic 40.0%
! CAAGACTTCTACAAGGTGTT+TGG + chr3_4:76397540-76397559 Msa0523050:CDS 40.0%
!! TGTTTGGTCCTGCTTTTATG+AGG + chr3_4:76397556-76397575 Msa0523050:CDS 40.0%
!! CTGCTTTTATGAGGAATGGA+CGG + chr3_4:76397565-76397584 Msa0523050:CDS 40.0%
TCATCACCTAGAGATGGAAT+TGG - chr3_4:76397606-76397625 None:intergenic 40.0%
GACTTATCATCACCTAGAGA+TGG - chr3_4:76397612-76397631 None:intergenic 40.0%
AAGATCAAACTCATCAGCCT+GGG - chr3_4:76397700-76397719 None:intergenic 40.0%
CTGAATCCCGAGATCATAAA+AGG + chr3_4:76397727-76397746 Msa0523050:CDS 40.0%
AATCCCGAGATCATAAAAGG+TGG + chr3_4:76397730-76397749 Msa0523050:CDS 40.0%
! CATCCACCTTTTATGATCTC+GGG - chr3_4:76397736-76397755 None:intergenic 40.0%
! CCATCCACCTTTTATGATCT+CGG - chr3_4:76397737-76397756 None:intergenic 40.0%
ACTGTCAGAAAAAGCTAGGA+AGG + chr3_4:76397773-76397792 Msa0523050:CDS 40.0%
AGGCAAAAGCTGAGAAGAAA+AGG + chr3_4:76397871-76397890 Msa0523050:CDS 40.0%
TTTCTCCTCTTCAGCAATTC+TGG - chr3_4:76397946-76397965 None:intergenic 40.0%
ACAGAAGAAGGTGAAAGAGA+AGG + chr3_4:76398013-76398032 Msa0523050:CDS 40.0%
AGAAGGAGAAAAAGCTCTTG+CGG + chr3_4:76398030-76398049 Msa0523050:CDS 40.0%
GGTTTGTGTGAGAAAATCGA+AGG + chr3_4:76398170-76398189 Msa0523050:CDS 40.0%
TGAGAAAATCGAAGGCAAAG+AGG + chr3_4:76398178-76398197 Msa0523050:CDS 40.0%
ACTGAGTTGCAAGAAAAACG+TGG + chr3_4:76398232-76398251 Msa0523050:CDS 40.0%
AATGGCTATGTCAAGGCTAA+TGG + chr3_4:76398278-76398297 Msa0523050:CDS 40.0%
AGTTTCCCAAAGGAACTTCA+AGG + chr3_4:76398390-76398409 Msa0523050:CDS 40.0%
CATCTCCTTGAAGTTCCTTT+GGG - chr3_4:76398398-76398417 None:intergenic 40.0%
CAAAGGAACTTCAAGGAGAT+GGG + chr3_4:76398397-76398416 Msa0523050:CDS 40.0%
GTTTCAGAATACATTGGCAC+TGG + chr3_4:76398425-76398444 Msa0523050:CDS 40.0%
! TCAAAAGCTTTGGCTGTATC+GGG - chr3_4:76398503-76398522 None:intergenic 40.0%
TCAAGGAGTTTCAGAACAAG+AGG + chr3_4:76398733-76398752 Msa0523050:CDS 40.0%
!! ATCTCTGGTTAGCTTCCTTT+GGG - chr3_4:76398808-76398827 None:intergenic 40.0%
AAAGGAAGCTAACCAGAGAT+GGG + chr3_4:76398808-76398827 Msa0523050:CDS 40.0%
TGTTTGAACAGCCATTATGG+AGG - chr3_4:76396962-76396981 None:intergenic 40.0%
TACTCACAAGAGCTTGTAGA+TGG + chr3_4:76397000-76397019 Msa0523050:CDS 40.0%
ACTCACAAGAGCTTGTAGAT+GGG + chr3_4:76397001-76397020 Msa0523050:CDS 40.0%
!! TAAGGCGTTGAAATATGACC+CGG + chr3_4:76397059-76397078 Msa0523050:CDS 40.0%
TTGCTGCTGTAAGAATCAGA+AGG - chr3_4:76397195-76397214 None:intergenic 40.0%
AGCAAGAGCAAGAAGAAATC+TGG + chr3_4:76397210-76397229 Msa0523050:CDS 40.0%
AGCAAGAAGAAATCTGGTGA+CGG + chr3_4:76397216-76397235 Msa0523050:CDS 40.0%
CCGTAGCAAGATATCTAAGA+TGG - chr3_4:76397284-76397303 None:intergenic 40.0%
TCTTAGATATCTTGCTACGG+AGG + chr3_4:76397284-76397303 Msa0523050:CDS 40.0%
AACTTCCTTGAGGTTTCATC+CGG + chr3_4:76397332-76397351 Msa0523050:CDS 40.0%
TGATCCACAAGACTTCTACA+AGG + chr3_4:76397533-76397552 Msa0523050:CDS 40.0%
AACACCTTGTAGAAGTCTTG+TGG - chr3_4:76397540-76397559 None:intergenic 40.0%
! CAAGACTTCTACAAGGTGTT+TGG + chr3_4:76397540-76397559 Msa0523050:CDS 40.0%
!! TGTTTGGTCCTGCTTTTATG+AGG + chr3_4:76397556-76397575 Msa0523050:CDS 40.0%
!! CTGCTTTTATGAGGAATGGA+CGG + chr3_4:76397565-76397584 Msa0523050:CDS 40.0%
TCATCACCTAGAGATGGAAT+TGG - chr3_4:76397606-76397625 None:intergenic 40.0%
GACTTATCATCACCTAGAGA+TGG - chr3_4:76397612-76397631 None:intergenic 40.0%
AAGATCAAACTCATCAGCCT+GGG - chr3_4:76397700-76397719 None:intergenic 40.0%
CTGAATCCCGAGATCATAAA+AGG + chr3_4:76397727-76397746 Msa0523050:CDS 40.0%
AATCCCGAGATCATAAAAGG+TGG + chr3_4:76397730-76397749 Msa0523050:CDS 40.0%
! CATCCACCTTTTATGATCTC+GGG - chr3_4:76397736-76397755 None:intergenic 40.0%
! CCATCCACCTTTTATGATCT+CGG - chr3_4:76397737-76397756 None:intergenic 40.0%
ACTGTCAGAAAAAGCTAGGA+AGG + chr3_4:76397773-76397792 Msa0523050:CDS 40.0%
AGGCAAAAGCTGAGAAGAAA+AGG + chr3_4:76397871-76397890 Msa0523050:CDS 40.0%
TTTCTCCTCTTCAGCAATTC+TGG - chr3_4:76397946-76397965 None:intergenic 40.0%
ACAGAAGAAGGTGAAAGAGA+AGG + chr3_4:76398013-76398032 Msa0523050:CDS 40.0%
AGAAGGAGAAAAAGCTCTTG+CGG + chr3_4:76398030-76398049 Msa0523050:CDS 40.0%
GGTTTGTGTGAGAAAATCGA+AGG + chr3_4:76398170-76398189 Msa0523050:CDS 40.0%
TGAGAAAATCGAAGGCAAAG+AGG + chr3_4:76398178-76398197 Msa0523050:CDS 40.0%
ACTGAGTTGCAAGAAAAACG+TGG + chr3_4:76398232-76398251 Msa0523050:CDS 40.0%
AATGGCTATGTCAAGGCTAA+TGG + chr3_4:76398278-76398297 Msa0523050:CDS 40.0%
AGTTTCCCAAAGGAACTTCA+AGG + chr3_4:76398390-76398409 Msa0523050:CDS 40.0%
CATCTCCTTGAAGTTCCTTT+GGG - chr3_4:76398398-76398417 None:intergenic 40.0%
CAAAGGAACTTCAAGGAGAT+GGG + chr3_4:76398397-76398416 Msa0523050:CDS 40.0%
GTTTCAGAATACATTGGCAC+TGG + chr3_4:76398425-76398444 Msa0523050:CDS 40.0%
! TCAAAAGCTTTGGCTGTATC+GGG - chr3_4:76398503-76398522 None:intergenic 40.0%
TCAAGGAGTTTCAGAACAAG+AGG + chr3_4:76398733-76398752 Msa0523050:CDS 40.0%
!! ATCTCTGGTTAGCTTCCTTT+GGG - chr3_4:76398808-76398827 None:intergenic 40.0%
AAAGGAAGCTAACCAGAGAT+GGG + chr3_4:76398808-76398827 Msa0523050:CDS 40.0%
GCTGCTGCACTTAAACTTCT+CGG + chr3_4:76397099-76397118 Msa0523050:CDS 45.0%
TTTGTCCGGATGAAACCTCA+AGG - chr3_4:76397340-76397359 None:intergenic 45.0%
TCTTGTGGATCACAGTCAGT+GGG - chr3_4:76397525-76397544 None:intergenic 45.0%
!! GGTCCTGCTTTTATGAGGAA+TGG + chr3_4:76397561-76397580 Msa0523050:CDS 45.0%
CGTCCATTCCTCATAAAAGC+AGG - chr3_4:76397567-76397586 None:intergenic 45.0%
! CTTTTATGAGGAATGGACGG+TGG + chr3_4:76397568-76397587 Msa0523050:CDS 45.0%
AGATCAAACTCATCAGCCTG+GGG - chr3_4:76397699-76397718 None:intergenic 45.0%
CAAGATCAAACTCATCAGCC+TGG - chr3_4:76397701-76397720 None:intergenic 45.0%
CCGAGATCATAAAAGGTGGA+TGG + chr3_4:76397734-76397753 Msa0523050:CDS 45.0%
TATGGCAAAGAAGTTGGAGG+AGG + chr3_4:76397911-76397930 Msa0523050:CDS 45.0%
GGAGAAACAACGAAAAGCAG+AGG + chr3_4:76397959-76397978 Msa0523050:CDS 45.0%
CTTCTGTTGCAAAGCAGCTT+CGG - chr3_4:76398000-76398019 None:intergenic 45.0%
! AGCTGCTTTGCAACAGAAGA+AGG + chr3_4:76398001-76398020 Msa0523050:CDS 45.0%
CAGAGAAGAAGGAGAAACCT+TGG + chr3_4:76398327-76398346 Msa0523050:CDS 45.0%
CCATCTCCTTGAAGTTCCTT+TGG - chr3_4:76398399-76398418 None:intergenic 45.0%
CCAAAGGAACTTCAAGGAGA+TGG + chr3_4:76398396-76398415 Msa0523050:CDS 45.0%
GATGCAATTGATTGTGCTGC+AGG - chr3_4:76398548-76398567 None:intergenic 45.0%
ATTGTTGTCGTCGTCATCGT+CGG - chr3_4:76398665-76398684 None:intergenic 45.0%
GACGACAACAATTCCAACAC+CGG + chr3_4:76398673-76398692 Msa0523050:CDS 45.0%
! TTGATGCTGCTTGTTGCTGT+CGG - chr3_4:76398701-76398720 None:intergenic 45.0%
AGCAACAAGCAGCATCAACT+CGG + chr3_4:76398703-76398722 Msa0523050:CDS 45.0%
ATCAACTCGGAAGACTCTCA+AGG + chr3_4:76398716-76398735 Msa0523050:CDS 45.0%
!! CATCTCTGGTTAGCTTCCTT+TGG - chr3_4:76398809-76398828 None:intergenic 45.0%
CAAAGGAAGCTAACCAGAGA+TGG + chr3_4:76398807-76398826 Msa0523050:CDS 45.0%
GCTGCTGCACTTAAACTTCT+CGG + chr3_4:76397099-76397118 Msa0523050:CDS 45.0%
TTTGTCCGGATGAAACCTCA+AGG - chr3_4:76397340-76397359 None:intergenic 45.0%
TCTTGTGGATCACAGTCAGT+GGG - chr3_4:76397525-76397544 None:intergenic 45.0%
!! GGTCCTGCTTTTATGAGGAA+TGG + chr3_4:76397561-76397580 Msa0523050:CDS 45.0%
CGTCCATTCCTCATAAAAGC+AGG - chr3_4:76397567-76397586 None:intergenic 45.0%
! CTTTTATGAGGAATGGACGG+TGG + chr3_4:76397568-76397587 Msa0523050:CDS 45.0%
AGATCAAACTCATCAGCCTG+GGG - chr3_4:76397699-76397718 None:intergenic 45.0%
CAAGATCAAACTCATCAGCC+TGG - chr3_4:76397701-76397720 None:intergenic 45.0%
CCGAGATCATAAAAGGTGGA+TGG + chr3_4:76397734-76397753 Msa0523050:CDS 45.0%
TATGGCAAAGAAGTTGGAGG+AGG + chr3_4:76397911-76397930 Msa0523050:CDS 45.0%
GGAGAAACAACGAAAAGCAG+AGG + chr3_4:76397959-76397978 Msa0523050:CDS 45.0%
CTTCTGTTGCAAAGCAGCTT+CGG - chr3_4:76398000-76398019 None:intergenic 45.0%
! AGCTGCTTTGCAACAGAAGA+AGG + chr3_4:76398001-76398020 Msa0523050:CDS 45.0%
CAGAGAAGAAGGAGAAACCT+TGG + chr3_4:76398327-76398346 Msa0523050:CDS 45.0%
CCATCTCCTTGAAGTTCCTT+TGG - chr3_4:76398399-76398418 None:intergenic 45.0%
CCAAAGGAACTTCAAGGAGA+TGG + chr3_4:76398396-76398415 Msa0523050:CDS 45.0%
GATGCAATTGATTGTGCTGC+AGG - chr3_4:76398548-76398567 None:intergenic 45.0%
ATTGTTGTCGTCGTCATCGT+CGG - chr3_4:76398665-76398684 None:intergenic 45.0%
GACGACAACAATTCCAACAC+CGG + chr3_4:76398673-76398692 Msa0523050:CDS 45.0%
! TTGATGCTGCTTGTTGCTGT+CGG - chr3_4:76398701-76398720 None:intergenic 45.0%
AGCAACAAGCAGCATCAACT+CGG + chr3_4:76398703-76398722 Msa0523050:CDS 45.0%
ATCAACTCGGAAGACTCTCA+AGG + chr3_4:76398716-76398735 Msa0523050:CDS 45.0%
!! CATCTCTGGTTAGCTTCCTT+TGG - chr3_4:76398809-76398828 None:intergenic 45.0%
CAAAGGAAGCTAACCAGAGA+TGG + chr3_4:76398807-76398826 Msa0523050:CDS 45.0%
TTGTTGGCCAGCCTCCATAA+TGG + chr3_4:76396948-76396967 Msa0523050:intron 50.0%
TGAACAGCCATTATGGAGGC+TGG - chr3_4:76396958-76396977 None:intergenic 50.0%
CATGAAAAGAGTGACCAGCC+GGG - chr3_4:76397080-76397099 None:intergenic 50.0%
GCATGAAAAGAGTGACCAGC+CGG - chr3_4:76397081-76397100 None:intergenic 50.0%
GAGGTTTCATCCGGACAAAC+AGG + chr3_4:76397341-76397360 Msa0523050:CDS 50.0%
! CTTCGCAGCTTCAGTTTGCT+CGG - chr3_4:76397382-76397401 None:intergenic 50.0%
CCAACACTGCATAAGCCTCT+TGG - chr3_4:76397446-76397465 None:intergenic 50.0%
CCAAGAGGCTTATGCAGTGT+TGG + chr3_4:76397443-76397462 Msa0523050:CDS 50.0%
GTCTTGTGGATCACAGTCAG+TGG - chr3_4:76397526-76397545 None:intergenic 50.0%
TATGAGGAATGGACGGTGGT+CGG + chr3_4:76397572-76397591 Msa0523050:CDS 50.0%
GAAGTTGGAGGAGGAAGAAG+CGG + chr3_4:76397920-76397939 Msa0523050:CDS 50.0%
GGAGAAAAAGCTCTTGCGGA+AGG + chr3_4:76398034-76398053 Msa0523050:CDS 50.0%
GGAAGCAGTAGTTCTCTAGC+AGG + chr3_4:76398299-76398318 Msa0523050:CDS 50.0%
AGCAGGCTACACAGAGAAGA+AGG + chr3_4:76398316-76398335 Msa0523050:CDS 50.0%
AGGAACTTCAAGGAGATGGG+AGG + chr3_4:76398400-76398419 Msa0523050:CDS 50.0%
GAGTTTCAGAACAAGAGGCG+TGG + chr3_4:76398738-76398757 Msa0523050:CDS 50.0%
!! CTGGTTAGCTTCCTTTGGGA+AGG - chr3_4:76398804-76398823 None:intergenic 50.0%
TTGTTGGCCAGCCTCCATAA+TGG + chr3_4:76396948-76396967 Msa0523050:intron 50.0%
TGAACAGCCATTATGGAGGC+TGG - chr3_4:76396958-76396977 None:intergenic 50.0%
CATGAAAAGAGTGACCAGCC+GGG - chr3_4:76397080-76397099 None:intergenic 50.0%
GCATGAAAAGAGTGACCAGC+CGG - chr3_4:76397081-76397100 None:intergenic 50.0%
GAGGTTTCATCCGGACAAAC+AGG + chr3_4:76397341-76397360 Msa0523050:CDS 50.0%
! CTTCGCAGCTTCAGTTTGCT+CGG - chr3_4:76397382-76397401 None:intergenic 50.0%
CCAACACTGCATAAGCCTCT+TGG - chr3_4:76397446-76397465 None:intergenic 50.0%
CCAAGAGGCTTATGCAGTGT+TGG + chr3_4:76397443-76397462 Msa0523050:CDS 50.0%
GTCTTGTGGATCACAGTCAG+TGG - chr3_4:76397526-76397545 None:intergenic 50.0%
TATGAGGAATGGACGGTGGT+CGG + chr3_4:76397572-76397591 Msa0523050:CDS 50.0%
GAAGTTGGAGGAGGAAGAAG+CGG + chr3_4:76397920-76397939 Msa0523050:CDS 50.0%
GGAGAAAAAGCTCTTGCGGA+AGG + chr3_4:76398034-76398053 Msa0523050:CDS 50.0%
GGAAGCAGTAGTTCTCTAGC+AGG + chr3_4:76398299-76398318 Msa0523050:CDS 50.0%
AGCAGGCTACACAGAGAAGA+AGG + chr3_4:76398316-76398335 Msa0523050:CDS 50.0%
AGGAACTTCAAGGAGATGGG+AGG + chr3_4:76398400-76398419 Msa0523050:CDS 50.0%
GAGTTTCAGAACAAGAGGCG+TGG + chr3_4:76398738-76398757 Msa0523050:CDS 50.0%
!! CTGGTTAGCTTCCTTTGGGA+AGG - chr3_4:76398804-76398823 None:intergenic 50.0%
GCGTTGAAATATGACCCGGC+TGG + chr3_4:76397063-76397082 Msa0523050:CDS 55.0%
ACAGCAGCAGCCTGTTTGTC+CGG - chr3_4:76397354-76397373 None:intergenic 55.0%
CGAGCAAACTGAAGCTGCGA+AGG + chr3_4:76397380-76397399 Msa0523050:CDS 55.0%
GCAAACTGAAGCTGCGAAGG+AGG + chr3_4:76397383-76397402 Msa0523050:CDS 55.0%
AAGCTGGAGAGAGTTTCCCC+AGG + chr3_4:76397680-76397699 Msa0523050:CDS 55.0%
AGCGGCCAGAATTGCTGAAG+AGG + chr3_4:76397938-76397957 Msa0523050:CDS 55.0%
! ATCGGGCTTCTGGAGGAGAA+CGG - chr3_4:76398486-76398505 None:intergenic 55.0%
CTTTGGCTGTATCGGGCTTC+TGG - chr3_4:76398496-76398515 None:intergenic 55.0%
! CTGCTTGTTGCTGTCGGTAC+CGG - chr3_4:76398695-76398714 None:intergenic 55.0%
CAGCTACTCGTTCCCATCTC+TGG - chr3_4:76398823-76398842 None:intergenic 55.0%
GAGTAGCTGCAGCTGTACCT+GGG + chr3_4:76398834-76398853 Msa0523050:CDS 55.0%
GCGTTGAAATATGACCCGGC+TGG + chr3_4:76397063-76397082 Msa0523050:CDS 55.0%
ACAGCAGCAGCCTGTTTGTC+CGG - chr3_4:76397354-76397373 None:intergenic 55.0%
CGAGCAAACTGAAGCTGCGA+AGG + chr3_4:76397380-76397399 Msa0523050:CDS 55.0%
GCAAACTGAAGCTGCGAAGG+AGG + chr3_4:76397383-76397402 Msa0523050:CDS 55.0%
AAGCTGGAGAGAGTTTCCCC+AGG + chr3_4:76397680-76397699 Msa0523050:CDS 55.0%
AGCGGCCAGAATTGCTGAAG+AGG + chr3_4:76397938-76397957 Msa0523050:CDS 55.0%
! ATCGGGCTTCTGGAGGAGAA+CGG - chr3_4:76398486-76398505 None:intergenic 55.0%
CTTTGGCTGTATCGGGCTTC+TGG - chr3_4:76398496-76398515 None:intergenic 55.0%
! CTGCTTGTTGCTGTCGGTAC+CGG - chr3_4:76398695-76398714 None:intergenic 55.0%
CAGCTACTCGTTCCCATCTC+TGG - chr3_4:76398823-76398842 None:intergenic 55.0%
GAGTAGCTGCAGCTGTACCT+GGG + chr3_4:76398834-76398853 Msa0523050:CDS 55.0%
TGGCTGTATCGGGCTTCTGG+AGG - chr3_4:76398493-76398512 None:intergenic 60.0%
GTCGTCGTCATCGTCGGTGT+TGG - chr3_4:76398659-76398678 None:intergenic 60.0%
!! GTTGCTGTCGGTACCGGTGT+TGG - chr3_4:76398689-76398708 None:intergenic 60.0%
CGAGTAGCTGCAGCTGTACC+TGG + chr3_4:76398833-76398852 Msa0523050:CDS 60.0%
CACTGGATCACGGTCTTCCC+AGG - chr3_4:76398854-76398873 None:intergenic 60.0%
TGGCTGTATCGGGCTTCTGG+AGG - chr3_4:76398493-76398512 None:intergenic 60.0%
GTCGTCGTCATCGTCGGTGT+TGG - chr3_4:76398659-76398678 None:intergenic 60.0%
!! GTTGCTGTCGGTACCGGTGT+TGG - chr3_4:76398689-76398708 None:intergenic 60.0%
CGAGTAGCTGCAGCTGTACC+TGG + chr3_4:76398833-76398852 Msa0523050:CDS 60.0%
CACTGGATCACGGTCTTCCC+AGG - chr3_4:76398854-76398873 None:intergenic 60.0%
! AGAGGCGTGGTCTGCAGTGC+AGG + chr3_4:76398751-76398770 Msa0523050:CDS 65.0%
! AGAGGCGTGGTCTGCAGTGC+AGG + chr3_4:76398751-76398770 Msa0523050:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76396510 76398931 76396510 ID=Msa0523050;Name=Msa0523050
chr3_4 mRNA 76396510 76398931 76396510 ID=Msa0523050-mRNA-1;Parent=Msa0523050;Name=Msa0523050-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.5|1|1|4|0|663
chr3_4 exon 76396510 76396516 76396510 ID=Msa0523050-mRNA-1:exon:22130;Parent=Msa0523050-mRNA-1
chr3_4 exon 76396798 76396803 76396798 ID=Msa0523050-mRNA-1:exon:22131;Parent=Msa0523050-mRNA-1
chr3_4 exon 76396898 76396903 76396898 ID=Msa0523050-mRNA-1:exon:22132;Parent=Msa0523050-mRNA-1
chr3_4 exon 76396959 76398931 76396959 ID=Msa0523050-mRNA-1:exon:22133;Parent=Msa0523050-mRNA-1
chr3_4 CDS 76396510 76396516 76396510 ID=Msa0523050-mRNA-1:cds;Parent=Msa0523050-mRNA-1
chr3_4 CDS 76396798 76396803 76396798 ID=Msa0523050-mRNA-1:cds;Parent=Msa0523050-mRNA-1
chr3_4 CDS 76396898 76396903 76396898 ID=Msa0523050-mRNA-1:cds;Parent=Msa0523050-mRNA-1
chr3_4 CDS 76396959 76398931 76396959 ID=Msa0523050-mRNA-1:cds;Parent=Msa0523050-mRNA-1
Gene Sequence

>Msa0523050

ATGTTTTTTTCAGGTTTGACCTCCATAATGGCTGTTCAAACAAAATACCGTCTTATTACTTACTCACAAGAGCTTGTAGATGGGCAGCCTATTTTTGTTTCATCTAATTGTCTTCCGGTTAAGGCGTTGAAATATGACCCGGCTGGTCACTCTTTTCATGCTGCTGCACTTAAACTTCTCGGTGTTACAAAAGAAGATAACAAAGATGCTGATAAGAAGAATGTGGTTGAAGATAAGGAACATGTTTATTTGCCTTCTGATTCTTACAGCAGCAAGAGCAAGAAGAAATCTGGTGACGGAGACAAGCAACAGCAAGATCATTATGCATTATTGGGTTTGAGCCATCTTAGATATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCATAAAACTTCCTTGAGGTTTCATCCGGACAAACAGGCTGCTGCTGTTCTTTCCGAGCAAACTGAAGCTGCGAAGGAGGCAAAGAAGATTGAAATAGATGTTCATTTTAAGGCAATCCAAGAGGCTTATGCAGTGTTGGTCGATCCCGTAAAAAGAAGAATTTATGATTCTACAGACGAGTTTGATGATGAGATTCCCACTGACTGTGATCCACAAGACTTCTACAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGACGGTGGTCGGTTAATCAACCAATTCCATCTCTAGGTGATGATAAGTCTTCAATAAGGGAAGTTGATAGTTTCTACAATTTTTGGTATTCCTTTAAAAGCTGGAGAGAGTTTCCCCAGGCTGATGAGTTTGATCTTGAGCAAGCTGAATCCCGAGATCATAAAAGGTGGATGGAAAGGCAAAATGCAAAACTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGTATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATACTAAGAAGAAAGGAAGAGGCAAAAGCTGAGAAGAAAAGGAAAAAGGAGTCCAAATATATGGCAAAGAAGTTGGAGGAGGAAGAAGCGGCCAGAATTGCTGAAGAGGAGAAACAACGAAAAGCAGAGGAAGATAAAAAAGCTGCCGAAGCTGCTTTGCAACAGAAGAAGGTGAAAGAGAAGGAGAAAAAGCTCTTGCGGAAGGAGCGAACACGTCTTCGAACTCTCTCAAGACCTATCTTGTCACAACACATACTTGATATTGCTGAAGACGATGTAGAAGAGCTTTGCATGTCATTTGATATCGAACAATTGAGGGGTTTGTGTGAGAAAATCGAAGGCAAAGAGGTGTTAGAGCAAGCAGAAGCTCTAAAAGATGCACTGAGTTGCAAGAAAAACGTGGTTGATGAGAAAAGTAATCAACAAAATGGCTATGTCAAGGCTAATGGAAGCAGTAGTTCTCTAGCAGGCTACACAGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGAGCTATTGAGAAAAGGAATACAAAAGTTTCCCAAAGGAACTTCAAGGAGATGGGAGGTTGTTTCAGAATACATTGGCACTGGAAGATCTGTTGAAGAAATAATGAAAGCAACTAAAACCGTTCTCCTCCAGAAGCCCGATACAGCCAAAGCTTTTGATACATTTCTTGAGAAGAGGAAACCTGCAGCACAATCAATTGCATCCCCATTGTCAACTAGAGAAGAATTGGAAGGGGTCTCAATACCAGCAACAACAACTGAAAATAGTGATGCAAAAACAACAACTACTATACCAACACCGACGATGACGACGACAACAATTCCAACACCGGTACCGACAGCAACAAGCAGCATCAACTCGGAAGACTCTCAAGGAGTTTCAGAACAAGAGGCGTGGTCTGCAGTGCAGGAAAGAGCATTAGTTCAAGCTTTAAAAACCTTCCCAAAGGAAGCTAACCAGAGATGGGAACGAGTAGCTGCAGCTGTACCTGGGAAGACCGTGATCCAGTGCAAGAAAAAATTTGCCATGATGAAGGAAAATTTCAGGAACAAGAAAACTGCAGTTTGA

Protein sequence

>Msa0523050

MFFSGLTSIMAVQTKYRLITYSQELVDGQPIFVSSNCLPVKALKYDPAGHSFHAAALKLLGVTKEDNKDADKKNVVEDKEHVYLPSDSYSSKSKKKSGDGDKQQQDHYALLGLSHLRYLATEDQIRKSYHKTSLRFHPDKQAAAVLSEQTEAAKEAKKIEIDVHFKAIQEAYAVLVDPVKRRIYDSTDEFDDEIPTDCDPQDFYKVFGPAFMRNGRWSVNQPIPSLGDDKSSIREVDSFYNFWYSFKSWREFPQADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEAKAEKKRKKESKYMAKKLEEEEAARIAEEEKQRKAEEDKKAAEAALQQKKVKEKEKKLLRKERTRLRTLSRPILSQHILDIAEDDVEELCMSFDIEQLRGLCEKIEGKEVLEQAEALKDALSCKKNVVDEKSNQQNGYVKANGSSSSLAGYTEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLLQKPDTAKAFDTFLEKRKPAAQSIASPLSTREELEGVSIPATTTENSDAKTTTTIPTPTMTTTTIPTPVPTATSSINSEDSQGVSEQEAWSAVQERALVQALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAMMKENFRNKKTAV*