Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518530 | XP_003602665.1 | 80.297 | 741 | 63 | 9 | 1 | 664 | 1 | 735 | 0.0 | 917 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518530 | sp|Q0WQ57|AUXI2_ARATH | 58.046 | 348 | 108 | 7 | 351 | 664 | 548 | 891 | 6.62e-97 | 320 |
Msa0518530 | sp|Q0WQ57|AUXI2_ARATH | 39.574 | 235 | 107 | 8 | 78 | 301 | 165 | 375 | 2.56e-23 | 108 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518530 | G8A1N6 | 80.297 | 741 | 63 | 9 | 1 | 664 | 1 | 735 | 0.0 | 917 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001800 | Msa0518530 | 0.850391 | 1.750957e-60 | -8.615850e-47 |
Msa0044780 | Msa0518530 | -0.808693 | 2.732241e-50 | -8.615850e-47 |
Msa0046970 | Msa0518530 | 0.847237 | 1.312992e-59 | -8.615850e-47 |
Msa0081120 | Msa0518530 | -0.809450 | 1.881107e-50 | -8.615850e-47 |
Msa0106540 | Msa0518530 | 0.817939 | 2.541946e-52 | -8.615850e-47 |
Msa0157030 | Msa0518530 | -0.803587 | 3.246522e-49 | -8.615850e-47 |
Msa0225070 | Msa0518530 | -0.803712 | 3.058770e-49 | -8.615850e-47 |
Msa0371510 | Msa0518530 | 0.826801 | 2.221805e-54 | -8.615850e-47 |
Msa0378350 | Msa0518530 | 0.811505 | 6.768916e-51 | -8.615850e-47 |
Msa0380980 | Msa0518530 | 0.800230 | 1.588832e-48 | -8.615850e-47 |
Msa0386880 | Msa0518530 | 0.851239 | 1.010337e-60 | -8.615850e-47 |
Msa0402770 | Msa0518530 | 0.818549 | 1.849958e-52 | -8.615850e-47 |
Msa0419730 | Msa0518530 | 0.827929 | 1.192198e-54 | -8.615850e-47 |
Msa0419860 | Msa0518530 | 0.811151 | 8.078852e-51 | -8.615850e-47 |
Msa0428330 | Msa0518530 | -0.802746 | 4.847314e-49 | -8.615850e-47 |
Msa0450030 | Msa0518530 | 0.827221 | 1.763600e-54 | -8.615850e-47 |
Msa0457070 | Msa0518530 | -0.812588 | 3.930821e-51 | -8.615850e-47 |
Msa0467170 | Msa0518530 | 0.848285 | 6.754717e-60 | -8.615850e-47 |
Msa0467330 | Msa0518530 | 0.856589 | 2.905091e-62 | -8.615850e-47 |
Msa0279000 | Msa0518530 | 0.809338 | 1.988363e-50 | -8.615850e-47 |
Msa0303920 | Msa0518530 | 0.806442 | 8.211309e-50 | -8.615850e-47 |
Msa0518530 | Msa0525880 | 0.816240 | 6.124974e-52 | -8.615850e-47 |
Msa0518530 | Msa0555280 | 0.854382 | 1.277833e-61 | -8.615850e-47 |
Msa0518530 | Msa0574900 | 0.830702 | 2.530740e-55 | -8.615850e-47 |
Msa0518530 | Msa0575380 | 0.808943 | 2.415785e-50 | -8.615850e-47 |
Msa0518530 | Msa0576180 | 0.826821 | 2.198525e-54 | -8.615850e-47 |
Msa0518530 | Msa0576320 | 0.802489 | 5.474782e-49 | -8.615850e-47 |
Msa0518530 | Msa0579070 | -0.822119 | 2.808462e-53 | -8.615850e-47 |
Msa0518530 | Msa0597700 | 0.838370 | 2.993782e-57 | -8.615850e-47 |
Msa0518530 | Msa0606120 | 0.800180 | 1.626293e-48 | -8.615850e-47 |
Msa0518530 | Msa0608780 | -0.812309 | 4.522602e-51 | -8.615850e-47 |
Msa0518530 | Msa0608820 | 0.855088 | 7.977643e-62 | -8.615850e-47 |
Msa0518530 | Msa0610700 | -0.821266 | 4.423603e-53 | -8.615850e-47 |
Msa0518530 | Msa0649250 | -0.816337 | 5.824724e-52 | -8.615850e-47 |
Msa0518530 | Msa0685020 | 0.826376 | 2.806587e-54 | -8.615850e-47 |
Msa0518530 | Msa0691610 | 0.851112 | 1.096973e-60 | -8.615850e-47 |
Msa0518530 | Msa0732970 | 0.848901 | 4.562280e-60 | -8.615850e-47 |
Msa0518530 | Msa0745140 | 0.803072 | 4.149904e-49 | -8.615850e-47 |
Msa0518530 | Msa0746650 | 0.803387 | 3.571085e-49 | -8.615850e-47 |
Msa0518530 | Msa0773960 | 0.867383 | 1.424945e-65 | -8.615850e-47 |
Msa0518530 | Msa0775660 | 0.840433 | 8.722035e-58 | -8.615850e-47 |
Msa0518530 | Msa0776640 | 0.803942 | 2.739369e-49 | -8.615850e-47 |
Msa0518530 | Msa0825920 | 0.806173 | 9.353043e-50 | -8.615850e-47 |
Msa0518530 | Msa0837710 | 0.804953 | 1.686816e-49 | -8.615850e-47 |
Msa0518530 | Msa0838620 | -0.801926 | 7.148535e-49 | -8.615850e-47 |
Msa0518530 | Msa0853590 | 0.822569 | 2.208711e-53 | -8.615850e-47 |
Msa0518530 | Msa0930210 | 0.837067 | 6.466597e-57 | -8.615850e-47 |
Msa0518530 | Msa0930770 | 0.843566 | 1.294983e-58 | -8.615850e-47 |
Msa0518530 | Msa0945030 | 0.839778 | 1.292666e-57 | -8.615850e-47 |
Msa0518530 | Msa0967780 | 0.802541 | 5.341870e-49 | -8.615850e-47 |
Msa0518530 | Msa0968360 | 0.810926 | 9.040597e-51 | -8.615850e-47 |
Msa0518530 | Msa0982730 | 0.817301 | 3.540812e-52 | -8.615850e-47 |
Msa0518530 | Msa1013190 | 0.804253 | 2.360257e-49 | -8.615850e-47 |
Msa0518530 | Msa1029820 | 0.809073 | 2.266046e-50 | -8.615850e-47 |
Msa0518530 | Msa1068710 | 0.803281 | 3.756688e-49 | -8.615850e-47 |
Msa0518530 | Msa1068940 | 0.820010 | 8.596565e-53 | -8.615850e-47 |
Msa0518530 | Msa1078940 | 0.801256 | 9.808701e-49 | -8.615850e-47 |
Msa0518530 | Msa1156710 | 0.816275 | 6.015327e-52 | -8.615850e-47 |
Msa0518530 | Msa1156730 | 0.818555 | 1.844237e-52 | -8.615850e-47 |
Msa0518530 | Msa1205270 | -0.803373 | 3.595844e-49 | -8.615850e-47 |
Msa0518530 | Msa1286860 | -0.805970 | 1.032137e-49 | -8.615850e-47 |
Msa0518530 | Msa1297220 | -0.810675 | 1.024296e-50 | -8.615850e-47 |
Msa0518530 | Msa1323260 | -0.813209 | 2.873369e-51 | -8.615850e-47 |
Msa0518530 | Msa1347390 | 0.809630 | 1.720604e-50 | -8.615850e-47 |
Msa0518530 | Msa1365820 | 0.818475 | 1.923128e-52 | -8.615850e-47 |
Msa0518530 | Msa1368390 | 0.827278 | 1.709325e-54 | -8.615850e-47 |
Msa0518530 | Msa1405830 | 0.816256 | 6.074653e-52 | -8.615850e-47 |
Msa0518530 | Msa1457770 | 0.811677 | 6.212971e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518530 | MtrunA17_Chr3g0130631 | 80.297 | 741 | 63 | 9 | 1 | 664 | 1 | 735 | 0.0 | 917 |
Msa0518530 | MtrunA17_Chr3g0125121 | 60.976 | 246 | 90 | 3 | 422 | 663 | 277 | 520 | 2.70e-83 | 272 |
Msa0518530 | MtrunA17_Chr8g0372931 | 53.988 | 326 | 114 | 8 | 350 | 662 | 1136 | 1438 | 1.51e-81 | 281 |
Msa0518530 | MtrunA17_Chr1g0155381 | 46.839 | 348 | 132 | 6 | 327 | 662 | 1061 | 1367 | 1.52e-72 | 255 |
Msa0518530 | MtrunA17_Chr8g0384651 | 43.951 | 405 | 110 | 13 | 1 | 291 | 1 | 402 | 2.63e-65 | 231 |
Msa0518530 | MtrunA17_Chr3g0141421 | 57.426 | 101 | 43 | 0 | 559 | 659 | 588 | 688 | 3.11e-36 | 145 |
Msa0518530 | MtrunA17_Chr2g0304091 | 55.670 | 97 | 43 | 0 | 567 | 663 | 357 | 453 | 1.96e-31 | 128 |
Msa0518530 | MtrunA17_Chr8g0376701 | 51.020 | 98 | 48 | 0 | 566 | 663 | 363 | 460 | 5.31e-31 | 126 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518530 | AT4G12770.2 | 58.501 | 347 | 106 | 7 | 351 | 664 | 548 | 889 | 5.63e-99 | 323 |
Msa0518530 | AT4G12770.2 | 39.574 | 235 | 107 | 8 | 78 | 301 | 165 | 375 | 2.20e-24 | 109 |
Msa0518530 | AT4G12770.1 | 58.046 | 348 | 108 | 7 | 351 | 664 | 548 | 891 | 6.73e-98 | 320 |
Msa0518530 | AT4G12770.1 | 39.574 | 235 | 107 | 8 | 78 | 301 | 165 | 375 | 2.61e-24 | 108 |
Msa0518530 | AT4G12780.3 | 71.552 | 232 | 57 | 4 | 441 | 664 | 647 | 877 | 1.60e-91 | 303 |
Msa0518530 | AT4G12780.3 | 33.478 | 230 | 101 | 8 | 78 | 301 | 167 | 350 | 8.85e-11 | 65.9 |
Msa0518530 | AT4G12780.1 | 71.552 | 232 | 57 | 4 | 441 | 664 | 674 | 904 | 2.38e-91 | 303 |
Msa0518530 | AT4G12780.1 | 38.696 | 230 | 116 | 9 | 78 | 301 | 167 | 377 | 9.22e-20 | 94.7 |
Msa0518530 | AT4G12780.2 | 67.470 | 249 | 55 | 6 | 441 | 664 | 647 | 894 | 1.39e-87 | 293 |
Msa0518530 | AT4G12780.2 | 33.478 | 230 | 101 | 8 | 78 | 301 | 167 | 350 | 9.40e-11 | 65.9 |
Msa0518530 | AT1G21660.1 | 55.466 | 247 | 103 | 4 | 417 | 663 | 283 | 522 | 9.02e-81 | 266 |
Msa0518530 | AT4G36520.1 | 48.817 | 338 | 115 | 8 | 335 | 661 | 1130 | 1420 | 1.09e-72 | 256 |
Msa0518530 | AT1G75310.2 | 46.914 | 324 | 131 | 5 | 344 | 662 | 1163 | 1450 | 1.40e-67 | 241 |
Msa0518530 | AT1G75310.1 | 47.531 | 324 | 126 | 7 | 344 | 662 | 1163 | 1447 | 5.68e-64 | 231 |
Msa0518530 | AT1G75100.1 | 47.826 | 115 | 60 | 0 | 546 | 660 | 533 | 647 | 3.80e-32 | 132 |
Msa0518530 | AT1G30280.1 | 47.253 | 91 | 47 | 1 | 573 | 662 | 361 | 451 | 4.11e-22 | 100 |
Msa0518530 | AT4G12780.5 | 58.462 | 130 | 45 | 4 | 441 | 562 | 674 | 802 | 2.00e-21 | 99.8 |
Msa0518530 | AT4G12780.6 | 58.462 | 130 | 45 | 4 | 441 | 562 | 647 | 775 | 2.38e-21 | 99.8 |
Msa0518530 | AT4G12780.4 | 58.462 | 130 | 45 | 4 | 441 | 562 | 647 | 775 | 2.38e-21 | 99.8 |
Msa0518530 | AT1G30280.2 | 48.148 | 81 | 41 | 1 | 573 | 652 | 361 | 441 | 2.09e-19 | 92.0 |
Find 187 sgRNAs with CRISPR-Local
Find 566 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGACACAGTTGGAGGTTTC+TGG | 0.172178 | 3_4:-70328358 | None:intergenic |
TCCCTCAGCTGGAGAATTTC+AGG | 0.198356 | 3_4:+70328556 | Msa0518530:CDS |
CCCTTCTGCTGCACTTTATC+AGG | 0.215143 | 3_4:-70330175 | None:intergenic |
TACAGCCGCTACTGTTAAAA+AGG | 0.236113 | 3_4:+70330123 | Msa0518530:CDS |
CAGCAGCTGCAGCTCTTTCT+CGG | 0.239034 | 3_4:-70327620 | None:intergenic |
TTGTTATGTGTTCGTCTATC+AGG | 0.263486 | 3_4:-70326856 | None:intergenic |
CTGACGAACTTCACAACTTC+AGG | 0.270618 | 3_4:+70331635 | Msa0518530:three_prime_UTR |
TGGTGTAATATATGCTATTC+CGG | 0.278710 | 3_4:+70331835 | Msa0518530:three_prime_UTR |
GAAAGATCATCAACAATATT+AGG | 0.291136 | 3_4:-70328407 | None:intergenic |
AATTTACTAATCTCTTCTAA+TGG | 0.298569 | 3_4:-70326616 | None:intergenic |
CAGCAGCCTTCTCAGCTCTT+TGG | 0.302766 | 3_4:-70327368 | None:intergenic |
GATGATTTGATCAATGGATT+TGG | 0.304715 | 3_4:+70324771 | Msa0518530:CDS |
CCGGGGAAGTTGGGTTTATA+CGG | 0.305928 | 3_4:+70331854 | Msa0518530:three_prime_UTR |
TGAATGATGATCAGGTATTA+TGG | 0.312370 | 3_4:+70330059 | Msa0518530:intron |
CCTCAGATCATGACGATATA+TGG | 0.313995 | 3_4:+70327058 | Msa0518530:CDS |
AGCAGCTGCAGCTCTTTCTC+GGG | 0.328646 | 3_4:-70327619 | None:intergenic |
TTCAATTGATTCTTTATCTC+TGG | 0.335760 | 3_4:-70326815 | None:intergenic |
GATGCAACATCAAAACAATT+AGG | 0.338845 | 3_4:-70331729 | None:intergenic |
TACTCCCCGGTGTAACCTTT+GGG | 0.344054 | 3_4:-70331807 | None:intergenic |
CACAGGCCCACTCCTGATAT+TGG | 0.347676 | 3_4:+70326472 | Msa0518530:intron |
CGTTTATTAGCTACTGAATT+CGG | 0.353480 | 3_4:+70324429 | Msa0518530:CDS |
TTACTCCCCGGTGTAACCTT+TGG | 0.362427 | 3_4:-70331808 | None:intergenic |
ATTTACTAATCTCTTCTAAT+GGG | 0.371043 | 3_4:-70326615 | None:intergenic |
TTGTGTTTGACCACGGTGTT+GGG | 0.371244 | 3_4:-70326780 | None:intergenic |
ATGATTTGATCAATGGATTT+GGG | 0.374205 | 3_4:+70324772 | Msa0518530:CDS |
GCAGAAATATATTGCAGAAA+AGG | 0.382951 | 3_4:+70330210 | Msa0518530:CDS |
GGTGAAATTGGAAGATCCTT+TGG | 0.383015 | 3_4:-70324496 | None:intergenic |
AGGAGGCCTTGGAGCGCTAT+TGG | 0.387575 | 3_4:-70327706 | None:intergenic |
GATGATCTTCTCGGCGGATT+CGG | 0.391097 | 3_4:+70324702 | Msa0518530:CDS |
TTACACCGGGGAGTAATCTT+TGG | 0.395459 | 3_4:+70331815 | Msa0518530:three_prime_UTR |
TCTGATGATGAACCAATATC+AGG | 0.396642 | 3_4:-70326484 | None:intergenic |
AACTCCTGATCATGTTCAAC+AGG | 0.404831 | 3_4:-70326883 | None:intergenic |
GAAGTTAAGCGCTGGGCTGC+AGG | 0.405772 | 3_4:+70329455 | Msa0518530:CDS |
GAGTTAGACCTAGGAGGCCT+TGG | 0.407343 | 3_4:-70327717 | None:intergenic |
GAAGTTGAGAGAGGAAGTTT+TGG | 0.413068 | 3_4:-70324517 | None:intergenic |
CGCTGGGCTGCAGGGAAAGA+GGG | 0.414763 | 3_4:+70329464 | Msa0518530:CDS |
GACGGACATGGAAGCGAAAC+CGG | 0.417593 | 3_4:-70324619 | None:intergenic |
GGAGGTTTCTGGTTTACCTC+TGG | 0.418586 | 3_4:-70328347 | None:intergenic |
CCTCTGAAGGCGTTCCAATC+TGG | 0.418587 | 3_4:-70328612 | None:intergenic |
AGGGTCTTCTGTTGCATTGG+AGG | 0.419847 | 3_4:-70326533 | None:intergenic |
CGAGGAGGAGGTGGTCTTGA+AGG | 0.420028 | 3_4:-70327132 | None:intergenic |
ACTGCCTGCCAACCACATTC+AGG | 0.420484 | 3_4:-70330082 | None:intergenic |
ATTATTTATGTTGAGTGAAA+AGG | 0.421711 | 3_4:+70331946 | Msa0518530:three_prime_UTR |
AGCTAGAGTGCGTGCTGAAA+GGG | 0.423395 | 3_4:+70327410 | Msa0518530:CDS |
GTTGCGTTTGATGATCTTCT+CGG | 0.423406 | 3_4:+70324693 | Msa0518530:CDS |
GCGCTGGGCTGCAGGGAAAG+AGG | 0.430219 | 3_4:+70329463 | Msa0518530:CDS |
GGTGTAATATATGCTATTCC+GGG | 0.433153 | 3_4:+70331836 | Msa0518530:three_prime_UTR |
CTCAGTAACCACACCTTTGA+CGG | 0.433699 | 3_4:-70324806 | None:intergenic |
GATAGTTCATCAAATTCTAA+TGG | 0.437018 | 3_4:+70326664 | Msa0518530:CDS |
TGACCACGGTGTTGGGGAAT+CGG | 0.440553 | 3_4:-70326773 | None:intergenic |
ATATGCTATTCCGGGGAAGT+TGG | 0.448066 | 3_4:+70331844 | Msa0518530:three_prime_UTR |
TATGCTATTCCGGGGAAGTT+GGG | 0.448616 | 3_4:+70331845 | Msa0518530:three_prime_UTR |
AAGAATTGAAAGGGAAAGGA+AGG | 0.455730 | 3_4:+70327239 | Msa0518530:CDS |
GATTCCTGTTGAACATGATC+AGG | 0.457157 | 3_4:+70326879 | Msa0518530:CDS |
TGTGGAAAGGGCTGCTGCAG+AGG | 0.458750 | 3_4:+70327596 | Msa0518530:CDS |
CGTTCTTCAGCGTGAGGGGA+CGG | 0.458812 | 3_4:+70327682 | Msa0518530:CDS |
TCAGAGAGGACTAGCAGATA+TGG | 0.464943 | 3_4:+70326748 | Msa0518530:CDS |
AAAAGGGTCTTCTGTTGCAT+TGG | 0.465313 | 3_4:-70326536 | None:intergenic |
GAAGAGATCGGAATCATGAT+TGG | 0.465418 | 3_4:-70324568 | None:intergenic |
ACCGGAGGTGCTACGAGAGA+TGG | 0.465933 | 3_4:-70324601 | None:intergenic |
GAGAGCAAAGAAGAATTGAA+AGG | 0.467658 | 3_4:+70327229 | Msa0518530:CDS |
ATAGCGCTCCAAGGCCTCCT+AGG | 0.469434 | 3_4:+70327709 | Msa0518530:CDS |
CCGTGGTCAAACACAAGTTC+AGG | 0.471860 | 3_4:+70326787 | Msa0518530:CDS |
TCCAAAATATGAAGAAAAGT+TGG | 0.477629 | 3_4:+70327035 | Msa0518530:CDS |
GCTCCAACTGATTCATCCTC+AGG | 0.479394 | 3_4:+70326580 | Msa0518530:CDS |
GGAGAATTTCAGGAAGTTGA+AGG | 0.481680 | 3_4:+70328566 | Msa0518530:CDS |
ATATGTACTGGTCGAGGAGG+AGG | 0.482183 | 3_4:-70327144 | None:intergenic |
GGAAAGAGAAAATGAAAGAC+AGG | 0.482527 | 3_4:+70327293 | Msa0518530:CDS |
AAGCTAGAGTGCGTGCTGAA+AGG | 0.485213 | 3_4:+70327409 | Msa0518530:CDS |
AGAGCAAAGAAGAATTGAAA+GGG | 0.486134 | 3_4:+70327230 | Msa0518530:CDS |
CCCATCTCTCGTAGCACCTC+CGG | 0.486573 | 3_4:+70324600 | Msa0518530:CDS |
AGAAAGGCGAAAAGCCAGAT+TGG | 0.487061 | 3_4:+70328598 | Msa0518530:CDS |
CTTGTGTTTGACCACGGTGT+TGG | 0.489404 | 3_4:-70326781 | None:intergenic |
TGACGAACTTCACAACTTCA+GGG | 0.494649 | 3_4:+70331636 | Msa0518530:three_prime_UTR |
AAAGAAGAATTGAAAGGGAA+AGG | 0.494666 | 3_4:+70327235 | Msa0518530:CDS |
GTTCTTCAGCGTGAGGGGAC+GGG | 0.495306 | 3_4:+70327683 | Msa0518530:CDS |
GAGAACAACAGAGACTTGAG+AGG | 0.495826 | 3_4:+70327271 | Msa0518530:CDS |
CTTAGTACATACATATTGTA+AGG | 0.496733 | 3_4:-70329510 | None:intergenic |
CGCGCTCCTGAGCCCTCTGA+AGG | 0.498449 | 3_4:-70328625 | None:intergenic |
AGAAAATGAAAGACAGGCTG+TGG | 0.501628 | 3_4:+70327299 | Msa0518530:CDS |
ATTGGAAGAGTGAAAGGATC+GGG | 0.502219 | 3_4:-70324550 | None:intergenic |
GGGATTAGAATTGAAGAGAT+CGG | 0.502447 | 3_4:-70324580 | None:intergenic |
AAACAATTAGGTAATGTAAG+AGG | 0.503865 | 3_4:-70331717 | None:intergenic |
CATATCTGCCCGAGAATTGA+CGG | 0.506680 | 3_4:-70327010 | None:intergenic |
AAACCATGAGCAGCAGCAAA+AGG | 0.509397 | 3_4:+70327194 | Msa0518530:CDS |
TTTGAAGCATCTCCCTCAGC+TGG | 0.511972 | 3_4:+70328545 | Msa0518530:intron |
TCAACAATATTAGGTGATGA+TGG | 0.515248 | 3_4:-70328398 | None:intergenic |
CCGGAGGTGCTACGAGAGAT+GGG | 0.515653 | 3_4:-70324600 | None:intergenic |
TTTATGTTTGAAGACACAGT+TGG | 0.520718 | 3_4:-70328368 | None:intergenic |
TGGACTTTGAAGTTAAGCGC+TGG | 0.522927 | 3_4:+70329447 | Msa0518530:CDS |
CTGTGTCTTCAAACATAAAG+AGG | 0.524678 | 3_4:+70328372 | Msa0518530:CDS |
TCTGCTCTCTTTGAGTCTGT+AGG | 0.527874 | 3_4:-70329092 | None:intergenic |
TCTGACTTGGGAATATGTAC+TGG | 0.528885 | 3_4:-70327156 | None:intergenic |
CCGTATAAACCCAACTTCCC+CGG | 0.529023 | 3_4:-70331854 | None:intergenic |
TGTAAGAGGTAGCTGAGTTA+CGG | 0.530291 | 3_4:-70331703 | None:intergenic |
GGACTTTGAAGTTAAGCGCT+GGG | 0.530794 | 3_4:+70329448 | Msa0518530:CDS |
ATAATTAATAACAGGAAGCA+TGG | 0.533954 | 3_4:+70331580 | Msa0518530:intron |
CTTCTAATGGGTCTGAAAAG+TGG | 0.534760 | 3_4:-70326603 | None:intergenic |
TTTATACTAGGCAAAGGCAT+TGG | 0.535677 | 3_4:+70329050 | Msa0518530:intron |
TCAGAGGCTTGCGGAAACAC+TGG | 0.536353 | 3_4:+70329427 | Msa0518530:intron |
CAGAACGTGCTGCTGTGGAA+AGG | 0.537152 | 3_4:+70327583 | Msa0518530:CDS |
GAATCGTTCTTCAGCGTGAG+GGG | 0.539328 | 3_4:+70327678 | Msa0518530:CDS |
GAATTTCCAAGTCCATCAAA+AGG | 0.540071 | 3_4:-70326709 | None:intergenic |
ATCATGATTGGAAGAGTGAA+AGG | 0.543443 | 3_4:-70324556 | None:intergenic |
ATGGCCTGAATGTGGTTGGC+AGG | 0.545019 | 3_4:+70330078 | Msa0518530:CDS |
TTGAAGGGGAAAGTGAAGAA+AGG | 0.545134 | 3_4:+70328582 | Msa0518530:CDS |
AGAACGTGCTGCTGTGGAAA+GGG | 0.545428 | 3_4:+70327584 | Msa0518530:CDS |
ATTGGCTGAGAAGAATCAAC+GGG | 0.546286 | 3_4:+70329068 | Msa0518530:CDS |
GGAACGCCTTCAGAGGGCTC+AGG | 0.554110 | 3_4:+70328619 | Msa0518530:CDS |
ATGTTTGAAGACACAGTTGG+AGG | 0.555500 | 3_4:-70328365 | None:intergenic |
GAGAATTTCAGGAAGTTGAA+GGG | 0.556708 | 3_4:+70328567 | Msa0518530:CDS |
AGCTCGCCAAAGAGCTGAGA+AGG | 0.557004 | 3_4:+70327362 | Msa0518530:CDS |
GAAGGTGGTGGAGCAGAAGT+TGG | 0.558690 | 3_4:-70327114 | None:intergenic |
AAGTTAAGCGCTGGGCTGCA+GGG | 0.559252 | 3_4:+70329456 | Msa0518530:CDS |
TCCTGATAAAGTGCAGCAGA+AGG | 0.559973 | 3_4:+70330174 | Msa0518530:CDS |
GGAACAAGTCCTCCCGTCAA+AGG | 0.560199 | 3_4:+70324793 | Msa0518530:CDS |
ATTCGGTCATTCGAAGAAAA+CGG | 0.561173 | 3_4:+70324719 | Msa0518530:CDS |
TGTACTGGTCGAGGAGGAGG+TGG | 0.561547 | 3_4:-70327141 | None:intergenic |
TCAGTAACCACACCTTTGAC+GGG | 0.564015 | 3_4:-70324805 | None:intergenic |
TCCTGAAATTCTCCAGCTGA+GGG | 0.565222 | 3_4:-70328557 | None:intergenic |
TAAAGCAGAACGTGCTGCTG+TGG | 0.566166 | 3_4:+70327578 | Msa0518530:CDS |
TGGCCTGAGGATGAATCAGT+TGG | 0.568887 | 3_4:-70326583 | None:intergenic |
TGAGCAGCAGCAAAAGGAGA+TGG | 0.568955 | 3_4:+70327200 | Msa0518530:CDS |
ATGTGAATCGAAGTTGAGAG+AGG | 0.572513 | 3_4:-70324526 | None:intergenic |
TGAATCGTTCTTCAGCGTGA+GGG | 0.573586 | 3_4:+70327677 | Msa0518530:CDS |
GCTGGGCTGCAGGGAAAGAG+GGG | 0.574702 | 3_4:+70329465 | Msa0518530:CDS |
CCAGATTGGAACGCCTTCAG+AGG | 0.574933 | 3_4:+70328612 | Msa0518530:CDS |
TTGCATAGCCAATTCCATGT+GGG | 0.575755 | 3_4:+70331670 | Msa0518530:three_prime_UTR |
ATATCTGCCCGAGAATTGAC+GGG | 0.576043 | 3_4:-70327009 | None:intergenic |
GTCCTCTCTGATGAAAATGC+TGG | 0.577003 | 3_4:-70326736 | None:intergenic |
GATTGGAAGAGTGAAAGGAT+CGG | 0.577344 | 3_4:-70324551 | None:intergenic |
TGCATAGCCAATTCCATGTG+GGG | 0.577770 | 3_4:+70331671 | Msa0518530:three_prime_UTR |
GAGAAAGAGCTGCAGCTGCA+AGG | 0.578548 | 3_4:+70327535 | Msa0518530:CDS |
GGAGGTGGTCTTGAAGGTGG+TGG | 0.579037 | 3_4:-70327126 | None:intergenic |
TTCCTGAAATTCTCCAGCTG+AGG | 0.579563 | 3_4:-70328558 | None:intergenic |
GTGAAGAATGAGAGAGGTGT+CGG | 0.580582 | 3_4:+70324741 | Msa0518530:CDS |
GGAGGAGGTGGTCTTGAAGG+TGG | 0.581949 | 3_4:-70327129 | None:intergenic |
GGATGCCCAAAGGTTACACC+GGG | 0.582972 | 3_4:+70331802 | Msa0518530:three_prime_UTR |
TCACAAATAATAAAATTGAA+AGG | 0.583598 | 3_4:-70331996 | None:intergenic |
GCATAGCCAATTCCATGTGG+GGG | 0.585055 | 3_4:+70331672 | Msa0518530:three_prime_UTR |
TGATGCACAATTTCAGCCAG+AGG | 0.589144 | 3_4:+70328331 | Msa0518530:CDS |
CCATATATCGTCATGATCTG+AGG | 0.593418 | 3_4:-70327058 | None:intergenic |
TTGAATCGTTCTTCAGCGTG+AGG | 0.593892 | 3_4:+70327676 | Msa0518530:CDS |
AGGATGCCCAAAGGTTACAC+CGG | 0.594677 | 3_4:+70331801 | Msa0518530:three_prime_UTR |
GACGGGCCAATAGCGCTCCA+AGG | 0.596506 | 3_4:+70327700 | Msa0518530:CDS |
TTGGGAATATGTACTGGTCG+AGG | 0.596893 | 3_4:-70327150 | None:intergenic |
AAAACGGTGAAGAATGAGAG+AGG | 0.603787 | 3_4:+70324735 | Msa0518530:CDS |
CAGATTGGAACGCCTTCAGA+GGG | 0.608050 | 3_4:+70328613 | Msa0518530:CDS |
ATTGGTGCAGATTTGCCTTG+AGG | 0.610923 | 3_4:-70324459 | None:intergenic |
AATATATTTCTGCTGAAGAG+TGG | 0.620107 | 3_4:-70330200 | None:intergenic |
CATTGGCTGAGAAGAATCAA+CGG | 0.622100 | 3_4:+70329067 | Msa0518530:CDS |
GATGAACCAATATCAGGAGT+GGG | 0.623236 | 3_4:-70326478 | None:intergenic |
AACCTTTGGGCATCCTCACG+CGG | 0.623673 | 3_4:-70331794 | None:intergenic |
TTGGATGATGATGATGACAT+TGG | 0.623868 | 3_4:-70324477 | None:intergenic |
TCATGACGATATATGGCTAA+CGG | 0.623870 | 3_4:+70327065 | Msa0518530:CDS |
CCTGATAAAGTGCAGCAGAA+GGG | 0.624350 | 3_4:+70330175 | Msa0518530:CDS |
GAATTCGGTTTGAAACCTCA+AGG | 0.625188 | 3_4:+70324444 | Msa0518530:CDS |
TCAGAGGGCTCAGGAGCGCG+CGG | 0.626791 | 3_4:+70328628 | Msa0518530:CDS |
AGAATTTCAGGAAGTTGAAG+GGG | 0.630146 | 3_4:+70328568 | Msa0518530:CDS |
GTGTAATATATGCTATTCCG+GGG | 0.631134 | 3_4:+70331837 | Msa0518530:three_prime_UTR |
TGATGAACCAATATCAGGAG+TGG | 0.633810 | 3_4:-70326479 | None:intergenic |
CTCACAGAAGAGTTAGACCT+AGG | 0.635511 | 3_4:-70327726 | None:intergenic |
CATAGCCAATTCCATGTGGG+GGG | 0.638384 | 3_4:+70331673 | Msa0518530:three_prime_UTR |
TGAGGATGAATCAGTTGGAG+CGG | 0.639821 | 3_4:-70326578 | None:intergenic |
ATGTCATCATCATCATCCAA+AGG | 0.640651 | 3_4:+70324480 | Msa0518530:CDS |
GGTCAAACACAAGTTCAGGT+TGG | 0.644850 | 3_4:+70326791 | Msa0518530:CDS |
GCAGCAGCAAAAGGAGATGG+AGG | 0.644915 | 3_4:+70327203 | Msa0518530:CDS |
TTTGCATAGCCAATTCCATG+TGG | 0.645904 | 3_4:+70331669 | Msa0518530:three_prime_UTR |
TATTATGGCCTGAATGTGGT+TGG | 0.649392 | 3_4:+70330074 | Msa0518530:CDS |
AGAACAACAGAGACTTGAGA+GGG | 0.653891 | 3_4:+70327272 | Msa0518530:CDS |
TGTGTTTGACCACGGTGTTG+GGG | 0.654993 | 3_4:-70326779 | None:intergenic |
TGTGTCTTCAAACATAAAGA+GGG | 0.655665 | 3_4:+70328373 | Msa0518530:CDS |
GAGAAGATCATCAAACGCAA+CGG | 0.656158 | 3_4:-70324691 | None:intergenic |
ACATTGATTTCAGAGGCTTG+CGG | 0.656214 | 3_4:+70329418 | Msa0518530:intron |
ACAGAAGAGTTAGACCTAGG+AGG | 0.662653 | 3_4:-70327723 | None:intergenic |
TTCCGCGTGAGGATGCCCAA+AGG | 0.670155 | 3_4:+70331792 | Msa0518530:three_prime_UTR |
CCTGAACTTGTGTTTGACCA+CGG | 0.670451 | 3_4:-70326787 | None:intergenic |
GGAATATGTACTGGTCGAGG+AGG | 0.673478 | 3_4:-70327147 | None:intergenic |
GTAACCACACCTTTGACGGG+AGG | 0.676329 | 3_4:-70324802 | None:intergenic |
CAGGTATTATGGCCTGAATG+TGG | 0.679133 | 3_4:+70330070 | Msa0518530:intron |
AGTACATACATATTGTAAGG+TGG | 0.690241 | 3_4:-70329507 | None:intergenic |
TTACACCAAAGATTACTCCC+CGG | 0.702394 | 3_4:-70331820 | None:intergenic |
TGGGTCTGAAAAGTGGCCTG+AGG | 0.703931 | 3_4:-70326596 | None:intergenic |
GCGTTTGATGATCTTCTCGG+CGG | 0.720705 | 3_4:+70324696 | Msa0518530:CDS |
GGACATGGAAGCGAAACCGG+AGG | 0.721282 | 3_4:-70324616 | None:intergenic |
GCACCGATTCCCCAACACCG+TGG | 0.760752 | 3_4:+70326770 | Msa0518530:CDS |
GATGCCCAAAGGTTACACCG+GGG | 0.842506 | 3_4:+70331803 | Msa0518530:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATGTAATTAATTTTGTAT+AGG | - | chr3_4:70328067-70328086 | None:intergenic | 10.0% |
!!! | AAAAGAGTTTTAAATAAAAA+AGG | + | chr3_4:70328171-70328190 | Msa0518530:intron | 10.0% |
!!! | AAAGAGTTTTAAATAAAAAA+GGG | + | chr3_4:70328172-70328191 | Msa0518530:intron | 10.0% |
!! | AAAAGTTTAAATTATAAATG+GGG | - | chr3_4:70330515-70330534 | None:intergenic | 10.0% |
!! | TTATATCGAAAAATATTATA+CGG | + | chr3_4:70330775-70330794 | Msa0518530:intron | 10.0% |
!!! | TTATTTTTTAAAGCATTTTA+TGG | - | chr3_4:70331105-70331124 | None:intergenic | 10.0% |
!! | TTAAGTTTAAACACAATTAT+CGG | - | chr3_4:70325276-70325295 | None:intergenic | 15.0% |
!!! | AAATGACAATTTAAAATTTG+AGG | - | chr3_4:70325330-70325349 | None:intergenic | 15.0% |
!!! | CTGATTCAAATATTTTAAAA+GGG | - | chr3_4:70326555-70326574 | None:intergenic | 15.0% |
!! | AAACATTATTTATACTAAAG+CGG | + | chr3_4:70327763-70327782 | Msa0518530:intron | 15.0% |
!! | CATTAATAATAAAAATGATG+GGG | - | chr3_4:70327819-70327838 | None:intergenic | 15.0% |
!! | GCATTAATAATAAAAATGAT+GGG | - | chr3_4:70327820-70327839 | None:intergenic | 15.0% |
!! | TGCATTAATAATAAAAATGA+TGG | - | chr3_4:70327821-70327840 | None:intergenic | 15.0% |
!!! | ATCATTTTTATTATTAATGC+AGG | + | chr3_4:70327820-70327839 | Msa0518530:intron | 15.0% |
!! | AAATAACATTAATGTTTCAT+TGG | - | chr3_4:70327933-70327952 | None:intergenic | 15.0% |
!!! | AAACTCTTTTAAAATAAAAG+TGG | - | chr3_4:70328161-70328180 | None:intergenic | 15.0% |
!!! | TTTAGTTCAAAATTGTAAAT+TGG | - | chr3_4:70328739-70328758 | None:intergenic | 15.0% |
!!! | TTTTTCTTTTTAACAACTAA+TGG | - | chr3_4:70328899-70328918 | None:intergenic | 15.0% |
!! | ATATAATAATAGATAGCATA+AGG | - | chr3_4:70329564-70329583 | None:intergenic | 15.0% |
!! | GAAAGAATATTAAAAAAATC+TGG | - | chr3_4:70329610-70329629 | None:intergenic | 15.0% |
!!! | TACTTTCCATTTTTAAATTA+TGG | + | chr3_4:70331076-70331095 | Msa0518530:intron | 15.0% |
!!! | TATATTTCTAAATATAGACT+TGG | + | chr3_4:70331191-70331210 | Msa0518530:intron | 15.0% |
!! | TTATTAATTATCAAGCTTTA+AGG | - | chr3_4:70331571-70331590 | None:intergenic | 15.0% |
!!! | TATTGTAAAATATCATTTTG+TGG | + | chr3_4:70331900-70331919 | Msa0518530:three_prime_UTR | 15.0% |
!!! | ATTGTAAAATATCATTTTGT+GGG | + | chr3_4:70331901-70331920 | Msa0518530:three_prime_UTR | 15.0% |
!! | TCACAAATAATAAAATTGAA+AGG | - | chr3_4:70331999-70332018 | None:intergenic | 15.0% |
!! | TTGAATGTAATCATATTTGT+TGG | + | chr3_4:70325085-70325104 | Msa0518530:intron | 20.0% |
!!! | AGTGCATTTTAGAATAATAA+CGG | + | chr3_4:70325249-70325268 | Msa0518530:intron | 20.0% |
!! | TAAGTTTAAACACAATTATC+GGG | - | chr3_4:70325275-70325294 | None:intergenic | 20.0% |
!! | TAATTGTGTTTAAACTTAAG+TGG | + | chr3_4:70325277-70325296 | Msa0518530:intron | 20.0% |
!! | TATTCAAGGATAAAAGAATA+TGG | - | chr3_4:70325412-70325431 | None:intergenic | 20.0% |
!!! | TATTCTTTTATCCTTGAATA+TGG | + | chr3_4:70325412-70325431 | Msa0518530:intron | 20.0% |
!!! | TCAGTGATTTAATTTTTGAA+CGG | + | chr3_4:70325986-70326005 | Msa0518530:intron | 20.0% |
!! | AGATTTGAATTGAAATCTTA+TGG | + | chr3_4:70326297-70326316 | Msa0518530:intron | 20.0% |
!! | AACTAATACGTGAAAAATAA+GGG | - | chr3_4:70326406-70326425 | None:intergenic | 20.0% |
!!! | GCTGATTCAAATATTTTAAA+AGG | - | chr3_4:70326556-70326575 | None:intergenic | 20.0% |
!! | ATTTACTAATCTCTTCTAAT+GGG | - | chr3_4:70326618-70326637 | None:intergenic | 20.0% |
!! | AATTTACTAATCTCTTCTAA+TGG | - | chr3_4:70326619-70326638 | None:intergenic | 20.0% |
!! | TTAGAATCAGATGAATATTT+AGG | - | chr3_4:70326931-70326950 | None:intergenic | 20.0% |
!! | AACCATCATTAAAATAAGAA+GGG | - | chr3_4:70326984-70327003 | None:intergenic | 20.0% |
!! | AAACCATCATTAAAATAAGA+AGG | - | chr3_4:70326985-70327004 | None:intergenic | 20.0% |
!! | AAATAATGTTTATCAAGACA+TGG | - | chr3_4:70327754-70327773 | None:intergenic | 20.0% |
!!! | TAAATAGTTAAGGGTATAAT+AGG | - | chr3_4:70327958-70327977 | None:intergenic | 20.0% |
!! | AGAGAGTAATAAATAGTTAA+GGG | - | chr3_4:70327967-70327986 | None:intergenic | 20.0% |
!! | AAGAGAGTAATAAATAGTTA+AGG | - | chr3_4:70327968-70327987 | None:intergenic | 20.0% |
!! | ACAAAATTGTCCTTAATAAA+TGG | - | chr3_4:70328021-70328040 | None:intergenic | 20.0% |
!!! | CGTTTTAAATGTTAAAAGTT+TGG | + | chr3_4:70328230-70328249 | Msa0518530:intron | 20.0% |
!!! | TTGTTATTGATAGTAAAAGA+AGG | + | chr3_4:70328690-70328709 | Msa0518530:intron | 20.0% |
!!! | ATATATTTTGAACATGCAAT+GGG | - | chr3_4:70329200-70329219 | None:intergenic | 20.0% |
!!! | TATATATTTTGAACATGCAA+TGG | - | chr3_4:70329201-70329220 | None:intergenic | 20.0% |
!!! | TGAAAGAGATAGTTTTTTAT+AGG | - | chr3_4:70329238-70329257 | None:intergenic | 20.0% |
!!! | TTTCTTTAAAAAAATGCTTG+AGG | + | chr3_4:70329584-70329603 | Msa0518530:intron | 20.0% |
!! | TATGGATAACATATAAATAG+TGG | - | chr3_4:70329760-70329779 | None:intergenic | 20.0% |
!!! | AATTTTAGTAATTACCTGAT+TGG | - | chr3_4:70329798-70329817 | None:intergenic | 20.0% |
!! | ATCAGGTAATTACTAAAATT+AGG | + | chr3_4:70329798-70329817 | Msa0518530:intron | 20.0% |
!! | TTAAAAACACTATAAGTTAC+TGG | - | chr3_4:70329985-70330004 | None:intergenic | 20.0% |
!!! | AGTAACTTATAGTGTTTTTA+AGG | + | chr3_4:70329984-70330003 | Msa0518530:intron | 20.0% |
!! | TTAGAAAGAAATGTATAGAA+AGG | - | chr3_4:70330263-70330282 | None:intergenic | 20.0% |
!! | TACTAGATAAGAAATGATAT+AGG | - | chr3_4:70330401-70330420 | None:intergenic | 20.0% |
!! | TTTATTTGCAAGGATAAAAT+AGG | - | chr3_4:70330488-70330507 | None:intergenic | 20.0% |
!!! | TTTTTGGACTATAATTATCT+TGG | + | chr3_4:70330812-70330831 | Msa0518530:intron | 20.0% |
!!! | TTTTGGACTATAATTATCTT+GGG | + | chr3_4:70330813-70330832 | Msa0518530:intron | 20.0% |
!! | AAAATACAGGATAACTAATA+TGG | - | chr3_4:70331295-70331314 | None:intergenic | 20.0% |
!! | ATTACAAAACAATCTAATCT+TGG | - | chr3_4:70331518-70331537 | None:intergenic | 20.0% |
!!! | AAAGCTTGATAATTAATAAC+AGG | + | chr3_4:70331572-70331591 | Msa0518530:intron | 20.0% |
!!! | TTGTAAAATATCATTTTGTG+GGG | + | chr3_4:70331902-70331921 | Msa0518530:three_prime_UTR | 20.0% |
!! | ATTATTTATGTTGAGTGAAA+AGG | + | chr3_4:70331946-70331965 | Msa0518530:three_prime_UTR | 20.0% |
! | TAAAGAGGTTTATCATAAAC+AGG | - | chr3_4:70324651-70324670 | None:intergenic | 25.0% |
!!! | GATTTTGATGATTTGATCAA+TGG | + | chr3_4:70324765-70324784 | Msa0518530:CDS | 25.0% |
!! | ATGATTTGATCAATGGATTT+GGG | + | chr3_4:70324772-70324791 | Msa0518530:CDS | 25.0% |
!! | TTTTCAATTCTTACAAGTGT+CGG | - | chr3_4:70325055-70325074 | None:intergenic | 25.0% |
!! | AAAAGCTTTTGGTGAAATAT+TGG | + | chr3_4:70325200-70325219 | Msa0518530:intron | 25.0% |
!!! | CATGTTTTATTATATAGTGC+AGG | - | chr3_4:70325453-70325472 | None:intergenic | 25.0% |
!! | CTTTTTGCTTATCATGTATT+TGG | + | chr3_4:70325678-70325697 | Msa0518530:intron | 25.0% |
! | TAGTAGATCTTTCAAGAATA+TGG | + | chr3_4:70325750-70325769 | Msa0518530:intron | 25.0% |
! | AGTAGATCTTTCAAGAATAT+GGG | + | chr3_4:70325751-70325770 | Msa0518530:intron | 25.0% |
! | TAGACAACTGAAATAAATCT+TGG | + | chr3_4:70325919-70325938 | Msa0518530:intron | 25.0% |
!!! | TTTTTGAATTGGTTCATCAT+TGG | + | chr3_4:70326011-70326030 | Msa0518530:intron | 25.0% |
! | AAATGTTCCTATTTGACTAA+AGG | - | chr3_4:70326044-70326063 | None:intergenic | 25.0% |
!!! | AGTGTTTTGTTTATAGCTTA+AGG | + | chr3_4:70326125-70326144 | Msa0518530:intron | 25.0% |
!!! | GTGTTTTGTTTATAGCTTAA+GGG | + | chr3_4:70326126-70326145 | Msa0518530:intron | 25.0% |
! | CTTCTTAAATAAAAATGCAC+AGG | - | chr3_4:70326190-70326209 | None:intergenic | 25.0% |
!!! | GTGCATTTTTATTTAAGAAG+TGG | + | chr3_4:70326190-70326209 | Msa0518530:intron | 25.0% |
!!! | AGTGGATTTATCATTTTATC+TGG | + | chr3_4:70326208-70326227 | Msa0518530:intron | 25.0% |
! | TTATCTGGTAGCTTATAAAA+CGG | + | chr3_4:70326223-70326242 | Msa0518530:intron | 25.0% |
! | CAATAACTTTCTTATTCCAT+AGG | - | chr3_4:70326250-70326269 | None:intergenic | 25.0% |
! | TTTAACAAACATGAAGAGAA+TGG | + | chr3_4:70326348-70326367 | Msa0518530:intron | 25.0% |
! | TTAACAAACATGAAGAGAAT+GGG | + | chr3_4:70326349-70326368 | Msa0518530:intron | 25.0% |
! | GGAATAAGAATAATCGAAAA+GGG | + | chr3_4:70326370-70326389 | Msa0518530:intron | 25.0% |
! | CAACTAATACGTGAAAAATA+AGG | - | chr3_4:70326407-70326426 | None:intergenic | 25.0% |
! | GATAGTTCATCAAATTCTAA+TGG | + | chr3_4:70326664-70326683 | Msa0518530:CDS | 25.0% |
!! | TTCAATTGATTCTTTATCTC+TGG | - | chr3_4:70326818-70326837 | None:intergenic | 25.0% |
! | ACCATCATTAAAATAAGAAG+GGG | - | chr3_4:70326983-70327002 | None:intergenic | 25.0% |
! | TCCAAAATATGAAGAAAAGT+TGG | + | chr3_4:70327035-70327054 | Msa0518530:CDS | 25.0% |
!!! | GATCATTTTCATTTTTTTGC+TGG | - | chr3_4:70327656-70327675 | None:intergenic | 25.0% |
! | TGTAAAGCGACTTATAATTT+GGG | - | chr3_4:70327907-70327926 | None:intergenic | 25.0% |
! | TTGTAAAGCGACTTATAATT+TGG | - | chr3_4:70327908-70327927 | None:intergenic | 25.0% |
! | TTGTCCTTAATAAATGGTAT+GGG | - | chr3_4:70328015-70328034 | None:intergenic | 25.0% |
! | ATTGTCCTTAATAAATGGTA+TGG | - | chr3_4:70328016-70328035 | None:intergenic | 25.0% |
! | TCCAAAACGTCATATAATTT+GGG | + | chr3_4:70328105-70328124 | Msa0518530:intron | 25.0% |
! | GAAAGATCATCAACAATATT+AGG | - | chr3_4:70328410-70328429 | None:intergenic | 25.0% |
! | CTTCAAACCATAAAAGAAAA+GGG | - | chr3_4:70328532-70328551 | None:intergenic | 25.0% |
! | TTTGATATCTTGAAAGTGAA+AGG | + | chr3_4:70328838-70328857 | Msa0518530:intron | 25.0% |
! | AACTGAAAGAAAGAAAGAAA+TGG | - | chr3_4:70328934-70328953 | None:intergenic | 25.0% |
!! | AACCATTACCTTTTTATACT+AGG | + | chr3_4:70329038-70329057 | Msa0518530:intron | 25.0% |
!!! | CTTTTCTTTTTATTTGTGAC+CGG | + | chr3_4:70329145-70329164 | Msa0518530:intron | 25.0% |
!!! | TTTTCTTTTTATTTGTGACC+GGG | + | chr3_4:70329146-70329165 | Msa0518530:intron | 25.0% |
! | AATCATCCAACATAAAGATT+AGG | - | chr3_4:70329307-70329326 | None:intergenic | 25.0% |
! | CTTAGTACATACATATTGTA+AGG | - | chr3_4:70329513-70329532 | None:intergenic | 25.0% |
! | ATATGTATGTACTAAGTACT+TGG | + | chr3_4:70329517-70329536 | Msa0518530:intron | 25.0% |
! | TGGAAAATGCTTATACAATA+TGG | - | chr3_4:70329778-70329797 | None:intergenic | 25.0% |
!! | CTAAAATTAGGTGCATTTTA+AGG | + | chr3_4:70329810-70329829 | Msa0518530:intron | 25.0% |
!!! | AACTTATAGTGTTTTTAAGG+TGG | + | chr3_4:70329987-70330006 | Msa0518530:intron | 25.0% |
!!! | CAATAGTGCATTTATTTTGA+AGG | + | chr3_4:70330677-70330696 | Msa0518530:intron | 25.0% |
! | TTTGGACTATAATTATCTTG+GGG | + | chr3_4:70330814-70330833 | Msa0518530:intron | 25.0% |
! | TGGCATCCATAATTTAAAAA+TGG | - | chr3_4:70331085-70331104 | None:intergenic | 25.0% |
! | CAAAACAAAAAGTTCACAAA+GGG | - | chr3_4:70331249-70331268 | None:intergenic | 25.0% |
!! | TATTTTCCAAGAGAAAATGT+CGG | - | chr3_4:70331473-70331492 | None:intergenic | 25.0% |
! | ATAATTAATAACAGGAAGCA+TGG | + | chr3_4:70331580-70331599 | Msa0518530:intron | 25.0% |
! | AAACAATTAGGTAATGTAAG+AGG | - | chr3_4:70331720-70331739 | None:intergenic | 25.0% |
CGTTTATTAGCTACTGAATT+CGG | + | chr3_4:70324429-70324448 | Msa0518530:CDS | 30.0% | |
! | GATGATTTGATCAATGGATT+TGG | + | chr3_4:70324771-70324790 | Msa0518530:CDS | 30.0% |
TTAATTAAGAAGTTACGCTC+AGG | - | chr3_4:70324832-70324851 | None:intergenic | 30.0% | |
!! | ATGCTATATAGTTCTGATGA+AGG | + | chr3_4:70325173-70325192 | Msa0518530:intron | 30.0% |
!! | TGCTATATAGTTCTGATGAA+GGG | + | chr3_4:70325174-70325193 | Msa0518530:intron | 30.0% |
! | ATGAAGGGTTTAAAAGCTTT+TGG | + | chr3_4:70325189-70325208 | Msa0518530:intron | 30.0% |
! | GTGAAATATTGGTTAGAGAT+TGG | + | chr3_4:70325211-70325230 | Msa0518530:intron | 30.0% |
TTGTGTTTAAACTTAAGTGG+TGG | + | chr3_4:70325280-70325299 | Msa0518530:intron | 30.0% | |
!! | CTTTTAAGAGGCTTTCATAT+AGG | + | chr3_4:70325376-70325395 | Msa0518530:intron | 30.0% |
GCAGAATATTATCTATTTGC+TGG | + | chr3_4:70325482-70325501 | Msa0518530:intron | 30.0% | |
AACACTAAGATCAATTTCGA+AGG | - | chr3_4:70325582-70325601 | None:intergenic | 30.0% | |
TCGAAATTGATCTTAGTGTT+TGG | + | chr3_4:70325582-70325601 | Msa0518530:intron | 30.0% | |
! | ATTTTCCGAACATTAAGAGT+TGG | + | chr3_4:70325628-70325647 | Msa0518530:intron | 30.0% |
TTTGCGAAAAACTGTATGTT+TGG | + | chr3_4:70325706-70325725 | Msa0518530:intron | 30.0% | |
AGATTACCACACAAAATGAT+AGG | - | chr3_4:70325820-70325839 | None:intergenic | 30.0% | |
CAAACATACCATTGTTTGAA+AGG | + | chr3_4:70325858-70325877 | Msa0518530:intron | 30.0% | |
ACAACTGAAATAAATCTTGG+AGG | + | chr3_4:70325922-70325941 | Msa0518530:intron | 30.0% | |
! | TTTGAACGGCATTTTTGAAT+TGG | + | chr3_4:70326000-70326019 | Msa0518530:intron | 30.0% |
CTCATGAAGTTATAATGTGT+AGG | - | chr3_4:70326107-70326126 | None:intergenic | 30.0% | |
!!! | AAGGGTTCTTATTTTAGTAG+TGG | + | chr3_4:70326144-70326163 | Msa0518530:intron | 30.0% |
TCTGTAATGCTTTGTCTATT+AGG | + | chr3_4:70326274-70326293 | Msa0518530:intron | 30.0% | |
GGGAATAAGAATAATCGAAA+AGG | + | chr3_4:70326369-70326388 | Msa0518530:intron | 30.0% | |
ATACGTGAAAAATAAGGGAT+CGG | - | chr3_4:70326401-70326420 | None:intergenic | 30.0% | |
TTAACTTATCGTTTCATCAC+AGG | + | chr3_4:70326455-70326474 | Msa0518530:intron | 30.0% | |
CAATTGAAAAATTGTCTGTG+AGG | + | chr3_4:70326830-70326849 | Msa0518530:CDS | 30.0% | |
TTAAAATAAGAAGGGGAAGT+AGG | - | chr3_4:70326976-70326995 | None:intergenic | 30.0% | |
!!! | TCCCCTTCTTATTTTAATGA+TGG | + | chr3_4:70326979-70326998 | Msa0518530:intron | 30.0% |
! | GCCAACTTTTCTTCATATTT+TGG | - | chr3_4:70327039-70327058 | None:intergenic | 30.0% |
AGAGCAAAGAAGAATTGAAA+GGG | + | chr3_4:70327230-70327249 | Msa0518530:CDS | 30.0% | |
AAAGAAGAATTGAAAGGGAA+AGG | + | chr3_4:70327235-70327254 | Msa0518530:CDS | 30.0% | |
! | GACTTATAATTTGTGACGTA+GGG | - | chr3_4:70327864-70327883 | None:intergenic | 30.0% |
! | TGACTTATAATTTGTGACGT+AGG | - | chr3_4:70327865-70327884 | None:intergenic | 30.0% |
CTTTCCCATACCATTTATTA+AGG | + | chr3_4:70328008-70328027 | Msa0518530:intron | 30.0% | |
GTCCAAAACGTCATATAATT+TGG | + | chr3_4:70328104-70328123 | Msa0518530:intron | 30.0% | |
! | TCCCAAATTATATGACGTTT+TGG | - | chr3_4:70328109-70328128 | None:intergenic | 30.0% |
AAACGTCATATAATTTGGGA+CGG | + | chr3_4:70328109-70328128 | Msa0518530:intron | 30.0% | |
! | ATGCAAAAAGTATGACTCTA+TGG | - | chr3_4:70328267-70328286 | None:intergenic | 30.0% |
TTCTGTATCTCTTTACTTTC+AGG | + | chr3_4:70328298-70328317 | Msa0518530:intron | 30.0% | |
TTTATGTTTGAAGACACAGT+TGG | - | chr3_4:70328371-70328390 | None:intergenic | 30.0% | |
TGTGTCTTCAAACATAAAGA+GGG | + | chr3_4:70328373-70328392 | Msa0518530:CDS | 30.0% | |
TCAACAATATTAGGTGATGA+TGG | - | chr3_4:70328401-70328420 | None:intergenic | 30.0% | |
! | GATGATCTTTCCTCAATTTT+TGG | + | chr3_4:70328419-70328438 | Msa0518530:CDS | 30.0% |
GCAATATACTGTTATTGATG+TGG | + | chr3_4:70328457-70328476 | Msa0518530:intron | 30.0% | |
! | TTTCCATCCCTTTTCTTTTA+TGG | + | chr3_4:70328522-70328541 | Msa0518530:intron | 30.0% |
AAACCATAAAAGAAAAGGGA+TGG | - | chr3_4:70328528-70328547 | None:intergenic | 30.0% | |
GCTTCAAACCATAAAAGAAA+AGG | - | chr3_4:70328533-70328552 | None:intergenic | 30.0% | |
! | ATTGATTCCTATAGAAGTGT+TGG | + | chr3_4:70328764-70328783 | Msa0518530:intron | 30.0% |
!! | TTGATTCCTATAGAAGTGTT+GGG | + | chr3_4:70328765-70328784 | Msa0518530:intron | 30.0% |
! | AGTGTTGGGATAAAGAATAA+AGG | + | chr3_4:70328779-70328798 | Msa0518530:intron | 30.0% |
GTGTTGGGATAAAGAATAAA+GGG | + | chr3_4:70328780-70328799 | Msa0518530:intron | 30.0% | |
TGTTGGGATAAAGAATAAAG+GGG | + | chr3_4:70328781-70328800 | Msa0518530:intron | 30.0% | |
! | TAACAACTAATGGATAGTGT+AGG | - | chr3_4:70328889-70328908 | None:intergenic | 30.0% |
AGCATCTTAAAGAAAAGAGT+TGG | - | chr3_4:70328959-70328978 | None:intergenic | 30.0% | |
!!! | CTTTTCTTTAAGATGCTAAC+TGG | + | chr3_4:70328962-70328981 | Msa0518530:intron | 30.0% |
CATAGACAAACAATTTGAAG+AGG | - | chr3_4:70329010-70329029 | None:intergenic | 30.0% | |
TGCCTAGTATAAAAAGGTAA+TGG | - | chr3_4:70329043-70329062 | None:intergenic | 30.0% | |
! | TACCTTTTTATACTAGGCAA+AGG | + | chr3_4:70329044-70329063 | Msa0518530:intron | 30.0% |
CAACATAAAGATTAGGAAGT+TGG | - | chr3_4:70329300-70329319 | None:intergenic | 30.0% | |
CAACTTCCTAATCTTTATGT+TGG | + | chr3_4:70329298-70329317 | Msa0518530:intron | 30.0% | |
ATAAAAACCGTGCAAATTAG+CGG | - | chr3_4:70329360-70329379 | None:intergenic | 30.0% | |
AGTACATACATATTGTAAGG+TGG | - | chr3_4:70329510-70329529 | None:intergenic | 30.0% | |
AGTGGAGGAATTTAAATTAC+TGG | - | chr3_4:70329742-70329761 | None:intergenic | 30.0% | |
GGATAACATATAAATAGTGG+AGG | - | chr3_4:70329757-70329776 | None:intergenic | 30.0% | |
! | TGTATAAGCATTTTCCAATC+AGG | + | chr3_4:70329781-70329800 | Msa0518530:intron | 30.0% |
TCAATTGACTGTGATTGATT+TGG | - | chr3_4:70329881-70329900 | None:intergenic | 30.0% | |
ATCACAGTCAATTGAAATGA+AGG | + | chr3_4:70329886-70329905 | Msa0518530:intron | 30.0% | |
! | TTTCGGTGTACATTAAATCA+CGG | - | chr3_4:70329928-70329947 | None:intergenic | 30.0% |
TGAATGATGATCAGGTATTA+TGG | + | chr3_4:70330059-70330078 | Msa0518530:intron | 30.0% | |
! | ATAAGCCTTTTTAACAGTAG+CGG | - | chr3_4:70330131-70330150 | None:intergenic | 30.0% |
! | AATATATTTCTGCTGAAGAG+TGG | - | chr3_4:70330203-70330222 | None:intergenic | 30.0% |
GCAGAAATATATTGCAGAAA+AGG | + | chr3_4:70330210-70330229 | Msa0518530:CDS | 30.0% | |
! | AAAGGTTTTCGATCTACTAA+AGG | + | chr3_4:70330228-70330247 | Msa0518530:CDS | 30.0% |
GCCAGTTGAAAATAATGATT+AGG | + | chr3_4:70330311-70330330 | Msa0518530:intron | 30.0% | |
! | GCCTAATCATTATTTTCAAC+TGG | - | chr3_4:70330315-70330334 | None:intergenic | 30.0% |
TATTCTCATGTAACTGAGTT+TGG | + | chr3_4:70330422-70330441 | Msa0518530:intron | 30.0% | |
ATAAGATACTAAATCTGCAG+AGG | - | chr3_4:70330465-70330484 | None:intergenic | 30.0% | |
TAAACAGATATGGCAGAAAA+TGG | - | chr3_4:70330740-70330759 | None:intergenic | 30.0% | |
CATGTATCTCTAAACAGATA+TGG | - | chr3_4:70330750-70330769 | None:intergenic | 30.0% | |
!!! | GGTTAACATCTTGACTTTTT+TGG | + | chr3_4:70330796-70330815 | Msa0518530:intron | 30.0% |
TAATTATCTTGGGGTATGTT+TGG | + | chr3_4:70330823-70330842 | Msa0518530:intron | 30.0% | |
! | AGTGTGCTTGAAGTATTATA+TGG | + | chr3_4:70331129-70331148 | Msa0518530:intron | 30.0% |
CCAAAACAAAAAGTTCACAA+AGG | - | chr3_4:70331250-70331269 | None:intergenic | 30.0% | |
!! | CCTTTGTGAACTTTTTGTTT+TGG | + | chr3_4:70331247-70331266 | Msa0518530:intron | 30.0% |
! | GTATTGAATGCATTTTATGC+TGG | + | chr3_4:70331345-70331364 | Msa0518530:intron | 30.0% |
CTGGTCAAAACAAATAACAA+AGG | + | chr3_4:70331364-70331383 | Msa0518530:intron | 30.0% | |
GATGCAACATCAAAACAATT+AGG | - | chr3_4:70331732-70331751 | None:intergenic | 30.0% | |
! | TGGAAAAATTGGTTTCATTG+TGG | + | chr3_4:70331757-70331776 | Msa0518530:three_prime_UTR | 30.0% |
TGGTGTAATATATGCTATTC+CGG | + | chr3_4:70331835-70331854 | Msa0518530:three_prime_UTR | 30.0% | |
! | TTGGATGATGATGATGACAT+TGG | - | chr3_4:70324480-70324499 | None:intergenic | 35.0% |
ATGTCATCATCATCATCCAA+AGG | + | chr3_4:70324480-70324499 | Msa0518530:CDS | 35.0% | |
!! | AGAGGAAGTTTTGGTGAAAT+TGG | - | chr3_4:70324511-70324530 | None:intergenic | 35.0% |
ATCATGATTGGAAGAGTGAA+AGG | - | chr3_4:70324559-70324578 | None:intergenic | 35.0% | |
GGGATTAGAATTGAAGAGAT+CGG | - | chr3_4:70324583-70324602 | None:intergenic | 35.0% | |
ATTCGGTCATTCGAAGAAAA+CGG | + | chr3_4:70324719-70324738 | Msa0518530:CDS | 35.0% | |
! | TTTGCTTGCATTTGAAGCAA+CGG | + | chr3_4:70324933-70324952 | Msa0518530:intron | 35.0% |
TATCAATAAACCTCAACCTC+AGG | - | chr3_4:70324998-70325017 | None:intergenic | 35.0% | |
! | TATAGCATCGAAACTTCTGA+TGG | - | chr3_4:70325161-70325180 | None:intergenic | 35.0% |
!! | AAAATGCACTGATTCTCCAA+TGG | - | chr3_4:70325239-70325258 | None:intergenic | 35.0% |
TGAAAGCCTCTTAAAAGACA+GGG | - | chr3_4:70325373-70325392 | None:intergenic | 35.0% | |
ATGAAAGCCTCTTAAAAGAC+AGG | - | chr3_4:70325374-70325393 | None:intergenic | 35.0% | |
CTTGTGAACTTCCATATTCA+AGG | - | chr3_4:70325426-70325445 | None:intergenic | 35.0% | |
GTTATCCTTGCAGTTAAACA+AGG | + | chr3_4:70325504-70325523 | Msa0518530:intron | 35.0% | |
! | GTATTCCTTGTTTAACTGCA+AGG | - | chr3_4:70325512-70325531 | None:intergenic | 35.0% |
TGCAGTTAAACAAGGAATAC+TGG | + | chr3_4:70325512-70325531 | Msa0518530:intron | 35.0% | |
TAGTGTTTGGATCTCAAAAG+TGG | + | chr3_4:70325595-70325614 | Msa0518530:intron | 35.0% | |
GATCTCAAAAGTGGCTATAA+TGG | + | chr3_4:70325604-70325623 | Msa0518530:intron | 35.0% | |
CCAAACCAACTCTTAATGTT+CGG | - | chr3_4:70325636-70325655 | None:intergenic | 35.0% | |
!! | AACATTAAGAGTTGGTTTGG+AGG | + | chr3_4:70325636-70325655 | Msa0518530:intron | 35.0% |
!! | ACATTAAGAGTTGGTTTGGA+GGG | + | chr3_4:70325637-70325656 | Msa0518530:intron | 35.0% |
! | TTGTCTCCTATCATTTTGTG+TGG | + | chr3_4:70325811-70325830 | Msa0518530:intron | 35.0% |
ACCATTGTTTGAAAGGTAAC+AGG | + | chr3_4:70325865-70325884 | Msa0518530:intron | 35.0% | |
AAATCTTGGAGGAGTTTGTA+AGG | + | chr3_4:70325933-70325952 | Msa0518530:intron | 35.0% | |
AATCTTGGAGGAGTTTGTAA+GGG | + | chr3_4:70325934-70325953 | Msa0518530:intron | 35.0% | |
! | TTGAATTGGTTCATCATTGG+TGG | + | chr3_4:70326014-70326033 | Msa0518530:intron | 35.0% |
TGGACTTCCTTTAGTCAAAT+AGG | + | chr3_4:70326034-70326053 | Msa0518530:intron | 35.0% | |
GTGTAGGTACAAGATTTCAT+TGG | - | chr3_4:70326091-70326110 | None:intergenic | 35.0% | |
!!! | TAGTGGATTTTTCTTCTCAG+CGG | + | chr3_4:70326161-70326180 | Msa0518530:intron | 35.0% |
TAGCTTATAAAACGGACCTA+TGG | + | chr3_4:70326231-70326250 | Msa0518530:intron | 35.0% | |
TTAAACGAAATGCGATGCTT+AGG | - | chr3_4:70326333-70326352 | None:intergenic | 35.0% | |
! | TCTGATGATGAACCAATATC+AGG | - | chr3_4:70326487-70326506 | None:intergenic | 35.0% |
! | GATGATACTGATCCTTTTGA+TGG | + | chr3_4:70326697-70326716 | Msa0518530:CDS | 35.0% |
GAATTTCCAAGTCCATCAAA+AGG | - | chr3_4:70326712-70326731 | None:intergenic | 35.0% | |
TTGTTATGTGTTCGTCTATC+AGG | - | chr3_4:70326859-70326878 | None:intergenic | 35.0% | |
GAATATTTAGGCATGCCATA+TGG | - | chr3_4:70326919-70326938 | None:intergenic | 35.0% | |
GATTCTAATAAACCAGTAGC+TGG | + | chr3_4:70326943-70326962 | Msa0518530:intron | 35.0% | |
TCATGACGATATATGGCTAA+CGG | + | chr3_4:70327065-70327084 | Msa0518530:CDS | 35.0% | |
! | GAAGTTGGTTGTGTAAAAAG+AGG | - | chr3_4:70327102-70327121 | None:intergenic | 35.0% |
GAGAGCAAAGAAGAATTGAA+AGG | + | chr3_4:70327229-70327248 | Msa0518530:CDS | 35.0% | |
AAGAATTGAAAGGGAAAGGA+AGG | + | chr3_4:70327239-70327258 | Msa0518530:CDS | 35.0% | |
GGAAAGAGAAAATGAAAGAC+AGG | + | chr3_4:70327293-70327312 | Msa0518530:CDS | 35.0% | |
!! | TAACTCTTGGCTTTGATGTT+TGG | + | chr3_4:70327787-70327806 | Msa0518530:intron | 35.0% |
CTGTGTCTTCAAACATAAAG+AGG | + | chr3_4:70328372-70328391 | Msa0518530:CDS | 35.0% | |
!! | GATCTTTCCTCAATTTTTGG+AGG | + | chr3_4:70328422-70328441 | Msa0518530:CDS | 35.0% |
!! | TTTCCTCAATTTTTGGAGGT+AGG | + | chr3_4:70328426-70328445 | Msa0518530:intron | 35.0% |
AATCCTACCTCCAAAAATTG+AGG | - | chr3_4:70328432-70328451 | None:intergenic | 35.0% | |
!! | TTTTTGGAGGTAGGATTTTG+TGG | + | chr3_4:70328435-70328454 | Msa0518530:intron | 35.0% |
GAGAATTTCAGGAAGTTGAA+GGG | + | chr3_4:70328567-70328586 | Msa0518530:CDS | 35.0% | |
AGAATTTCAGGAAGTTGAAG+GGG | + | chr3_4:70328568-70328587 | Msa0518530:CDS | 35.0% | |
AAGAAGGCAACCAATAGTAA+AGG | + | chr3_4:70328706-70328725 | Msa0518530:intron | 35.0% | |
CTTTATCCCAACACTTCTAT+AGG | - | chr3_4:70328774-70328793 | None:intergenic | 35.0% | |
TGCCTTTGCCTAGTATAAAA+AGG | - | chr3_4:70329049-70329068 | None:intergenic | 35.0% | |
! | TTTATACTAGGCAAAGGCAT+TGG | + | chr3_4:70329050-70329069 | Msa0518530:intron | 35.0% |
GTTGGATGATTGTGATTAGT+TGG | + | chr3_4:70329316-70329335 | Msa0518530:intron | 35.0% | |
AGATTCACGAAGGAACATTT+CGG | - | chr3_4:70329945-70329964 | None:intergenic | 35.0% | |
! | CTATAAGTTACTGGAGTGTT+TGG | - | chr3_4:70329976-70329995 | None:intergenic | 35.0% |
TACCTGATCATCATTCATGA+AGG | - | chr3_4:70330056-70330075 | None:intergenic | 35.0% | |
GGTTTCCACATAAGAATTTG+TGG | + | chr3_4:70330353-70330372 | Msa0518530:intron | 35.0% | |
TTTGGCCACAAATTCTTATG+TGG | - | chr3_4:70330361-70330380 | None:intergenic | 35.0% | |
!!! | GTAACTGAGTTTGGTTTTCT+AGG | + | chr3_4:70330431-70330450 | Msa0518530:intron | 35.0% |
AACTGTAGTTAGTTATGCAC+TGG | + | chr3_4:70330614-70330633 | Msa0518530:intron | 35.0% | |
AGCTTCATATCTTGCATATC+TGG | + | chr3_4:70330647-70330666 | Msa0518530:intron | 35.0% | |
ATGAAGGCAATGTAGTATTC+TGG | - | chr3_4:70331543-70331562 | None:intergenic | 35.0% | |
!! | AAGCTTTAAGGCAAGAATGA+AGG | - | chr3_4:70331559-70331578 | None:intergenic | 35.0% |
!!! | TTGTTTTGATGTTGCATCCA+TGG | + | chr3_4:70331734-70331753 | Msa0518530:three_prime_UTR | 35.0% |
! | TGAAACCAATTTTTCCACCA+TGG | - | chr3_4:70331754-70331773 | None:intergenic | 35.0% |
GGTGTAATATATGCTATTCC+GGG | + | chr3_4:70331836-70331855 | Msa0518530:three_prime_UTR | 35.0% | |
GTGTAATATATGCTATTCCG+GGG | + | chr3_4:70331837-70331856 | Msa0518530:three_prime_UTR | 35.0% | |
! | ATATCATTTTGTGGGGATCT+AGG | + | chr3_4:70331909-70331928 | Msa0518530:three_prime_UTR | 35.0% |
! | GAATTCGGTTTGAAACCTCA+AGG | + | chr3_4:70324444-70324463 | Msa0518530:CDS | 40.0% |
GGTGAAATTGGAAGATCCTT+TGG | - | chr3_4:70324499-70324518 | None:intergenic | 40.0% | |
! | GAAGTTGAGAGAGGAAGTTT+TGG | - | chr3_4:70324520-70324539 | None:intergenic | 40.0% |
ATGTGAATCGAAGTTGAGAG+AGG | - | chr3_4:70324529-70324548 | None:intergenic | 40.0% | |
ATTGGAAGAGTGAAAGGATC+GGG | - | chr3_4:70324553-70324572 | None:intergenic | 40.0% | |
GATTGGAAGAGTGAAAGGAT+CGG | - | chr3_4:70324554-70324573 | None:intergenic | 40.0% | |
GAAGAGATCGGAATCATGAT+TGG | - | chr3_4:70324571-70324590 | None:intergenic | 40.0% | |
! | ATCATAAACAGGCGAGTTGA+CGG | - | chr3_4:70324640-70324659 | None:intergenic | 40.0% |
GAGAAGATCATCAAACGCAA+CGG | - | chr3_4:70324694-70324713 | None:intergenic | 40.0% | |
! | GTTGCGTTTGATGATCTTCT+CGG | + | chr3_4:70324693-70324712 | Msa0518530:CDS | 40.0% |
AAAACGGTGAAGAATGAGAG+AGG | + | chr3_4:70324735-70324754 | Msa0518530:CDS | 40.0% | |
! | CATATTTGTTGGTGTCTTGC+CGG | + | chr3_4:70325096-70325115 | Msa0518530:intron | 40.0% |
CTTCTGATGGAAGACATGTT+TGG | - | chr3_4:70325148-70325167 | None:intergenic | 40.0% | |
! | AAGTGGTGGAGACACATAAT+TGG | + | chr3_4:70325294-70325313 | Msa0518530:intron | 40.0% |
AGACAGGGAATGCATGATAT+CGG | - | chr3_4:70325358-70325377 | None:intergenic | 40.0% | |
! | TGCATTCCCTGTCTTTTAAG+AGG | + | chr3_4:70325364-70325383 | Msa0518530:intron | 40.0% |
TAATCTACTGACGACATTGC+AGG | - | chr3_4:70325538-70325557 | None:intergenic | 40.0% | |
! | CCGAACATTAAGAGTTGGTT+TGG | + | chr3_4:70325633-70325652 | Msa0518530:intron | 40.0% |
AGGAGACAAACAAACGCATA+TGG | - | chr3_4:70325800-70325819 | None:intergenic | 40.0% | |
GCCTGTTACCTTTCAAACAA+TGG | - | chr3_4:70325869-70325888 | None:intergenic | 40.0% | |
ATCTTGGAGGAGTTTGTAAG+GGG | + | chr3_4:70325935-70325954 | Msa0518530:intron | 40.0% | |
GATGAACCAATATCAGGAGT+GGG | - | chr3_4:70326481-70326500 | None:intergenic | 40.0% | |
TGATGAACCAATATCAGGAG+TGG | - | chr3_4:70326482-70326501 | None:intergenic | 40.0% | |
AAAAGGGTCTTCTGTTGCAT+TGG | - | chr3_4:70326539-70326558 | None:intergenic | 40.0% | |
! | CTTCTAATGGGTCTGAAAAG+TGG | - | chr3_4:70326606-70326625 | None:intergenic | 40.0% |
!!! | ACTGATCCTTTTGATGGACT+TGG | + | chr3_4:70326703-70326722 | Msa0518530:CDS | 40.0% |
! | TACCAGCATTTTCATCAGAG+AGG | + | chr3_4:70326734-70326753 | Msa0518530:CDS | 40.0% |
GATTCCTGTTGAACATGATC+AGG | + | chr3_4:70326879-70326898 | Msa0518530:CDS | 40.0% | |
AACTCCTGATCATGTTCAAC+AGG | - | chr3_4:70326886-70326905 | None:intergenic | 40.0% | |
GAGTTTCATCAAGTGCCATA+TGG | + | chr3_4:70326901-70326920 | Msa0518530:intron | 40.0% | |
!! | GTTTTAGACCCGTCAATTCT+CGG | + | chr3_4:70327001-70327020 | Msa0518530:intron | 40.0% |
! | TTTTAGACCCGTCAATTCTC+GGG | + | chr3_4:70327002-70327021 | Msa0518530:intron | 40.0% |
CCATATATCGTCATGATCTG+AGG | - | chr3_4:70327061-70327080 | None:intergenic | 40.0% | |
CCTCAGATCATGACGATATA+TGG | + | chr3_4:70327058-70327077 | Msa0518530:CDS | 40.0% | |
!! | TCTGACTTGGGAATATGTAC+TGG | - | chr3_4:70327159-70327178 | None:intergenic | 40.0% |
AGTACATATTCCCAAGTCAG+AGG | + | chr3_4:70327158-70327177 | Msa0518530:intron | 40.0% | |
AGAACAACAGAGACTTGAGA+GGG | + | chr3_4:70327272-70327291 | Msa0518530:CDS | 40.0% | |
AGAAAATGAAAGACAGGCTG+TGG | + | chr3_4:70327299-70327318 | Msa0518530:CDS | 40.0% | |
ATACTAAAGCGGCTAACTCT+TGG | + | chr3_4:70327774-70327793 | Msa0518530:intron | 40.0% | |
! | GTCATATAATTTGGGACGGA+GGG | + | chr3_4:70328113-70328132 | Msa0518530:intron | 40.0% |
ATGTTTGAAGACACAGTTGG+AGG | - | chr3_4:70328368-70328387 | None:intergenic | 40.0% | |
GGAGAATTTCAGGAAGTTGA+AGG | + | chr3_4:70328566-70328585 | Msa0518530:CDS | 40.0% | |
TTGAAGGGGAAAGTGAAGAA+AGG | + | chr3_4:70328582-70328601 | Msa0518530:CDS | 40.0% | |
AGGCAACCAATAGTAAAGGA+AGG | + | chr3_4:70328710-70328729 | Msa0518530:intron | 40.0% | |
TGGTTGCCTTCCTTTACTAT+TGG | - | chr3_4:70328719-70328738 | None:intergenic | 40.0% | |
GAATAAAGGGGAGTTAGAGA+AGG | + | chr3_4:70328793-70328812 | Msa0518530:intron | 40.0% | |
! | CATTGGCTGAGAAGAATCAA+CGG | + | chr3_4:70329067-70329086 | Msa0518530:CDS | 40.0% |
ATTGGCTGAGAAGAATCAAC+GGG | + | chr3_4:70329068-70329087 | Msa0518530:CDS | 40.0% | |
!! | TCTTTTTATTTGTGACCGGG+TGG | + | chr3_4:70329149-70329168 | Msa0518530:intron | 40.0% |
CTGACACAGATGCATGTATT+GGG | - | chr3_4:70329269-70329288 | None:intergenic | 40.0% | |
!! | ACATTGATTTCAGAGGCTTG+CGG | + | chr3_4:70329418-70329437 | Msa0518530:intron | 40.0% |
AAGTACTTGGTATAATGCCC+AGG | + | chr3_4:70329530-70329549 | Msa0518530:intron | 40.0% | |
AGTACTTGGTATAATGCCCA+GGG | + | chr3_4:70329531-70329550 | Msa0518530:intron | 40.0% | |
AGCAATGAGGTGATTAGATG+AGG | - | chr3_4:70329638-70329657 | None:intergenic | 40.0% | |
TACAACATTGTCCACTGAGT+AGG | - | chr3_4:70329661-70329680 | None:intergenic | 40.0% | |
TACTACAGTGCTCTGTAAAG+AGG | - | chr3_4:70329845-70329864 | None:intergenic | 40.0% | |
CTCCTTCATGAATGATGATC+AGG | + | chr3_4:70330051-70330070 | Msa0518530:intron | 40.0% | |
TATTATGGCCTGAATGTGGT+TGG | + | chr3_4:70330074-70330093 | Msa0518530:CDS | 40.0% | |
TACAGCCGCTACTGTTAAAA+AGG | + | chr3_4:70330123-70330142 | Msa0518530:CDS | 40.0% | |
AACCCACATGTAGATAACAG+TGG | - | chr3_4:70330337-70330356 | None:intergenic | 40.0% | |
GTGCATTACATGCACACATT+TGG | - | chr3_4:70330379-70330398 | None:intergenic | 40.0% | |
ATGGGGCTCATTTATTTGCA+AGG | - | chr3_4:70330498-70330517 | None:intergenic | 40.0% | |
TTATCTTGGGGTATGTTTGG+AGG | + | chr3_4:70330826-70330845 | Msa0518530:intron | 40.0% | |
TATCTTGGGGTATGTTTGGA+GGG | + | chr3_4:70330827-70330846 | Msa0518530:intron | 40.0% | |
!! | TTGGAGGGAATGGCTTTATA+GGG | - | chr3_4:70330994-70331013 | None:intergenic | 40.0% |
!! | TTTGGAGGGAATGGCTTTAT+AGG | - | chr3_4:70330995-70331014 | None:intergenic | 40.0% |
!!! | AGTTGGGTTTTGGAGACTTT+TGG | - | chr3_4:70331013-70331032 | None:intergenic | 40.0% |
! | TATGTTTGGGAGTTGGGTTT+TGG | - | chr3_4:70331023-70331042 | None:intergenic | 40.0% |
! | AAAGGGTATGTTTGGGAGTT+GGG | - | chr3_4:70331029-70331048 | None:intergenic | 40.0% |
! | TCCATCCAAAGGGTATGTTT+GGG | - | chr3_4:70331036-70331055 | None:intergenic | 40.0% |
AAACATACCCTTTGGATGGA+GGG | + | chr3_4:70331036-70331055 | Msa0518530:intron | 40.0% | |
AGTTCACAAAGGGTCTGTTT+GGG | - | chr3_4:70331239-70331258 | None:intergenic | 40.0% | |
AAGTTCACAAAGGGTCTGTT+TGG | - | chr3_4:70331240-70331259 | None:intergenic | 40.0% | |
TATATCTATGCTGCTGCTAG+CGG | - | chr3_4:70331318-70331337 | None:intergenic | 40.0% | |
AAGGTCCACTCTCAATTTAG+TGG | + | chr3_4:70331383-70331402 | Msa0518530:intron | 40.0% | |
AGGTCCACTCTCAATTTAGT+GGG | + | chr3_4:70331384-70331403 | Msa0518530:intron | 40.0% | |
AATCCCCACTAAATTGAGAG+TGG | - | chr3_4:70331391-70331410 | None:intergenic | 40.0% | |
! | GTGATACCGACATTTTCTCT+TGG | + | chr3_4:70331464-70331483 | Msa0518530:intron | 40.0% |
CAATCTAATCTTGGACAGAG+TGG | - | chr3_4:70331509-70331528 | None:intergenic | 40.0% | |
TGACGAACTTCACAACTTCA+GGG | + | chr3_4:70331636-70331655 | Msa0518530:three_prime_UTR | 40.0% | |
TTTGCATAGCCAATTCCATG+TGG | + | chr3_4:70331669-70331688 | Msa0518530:three_prime_UTR | 40.0% | |
TTGCATAGCCAATTCCATGT+GGG | + | chr3_4:70331670-70331689 | Msa0518530:three_prime_UTR | 40.0% | |
TGTAAGAGGTAGCTGAGTTA+CGG | - | chr3_4:70331706-70331725 | None:intergenic | 40.0% | |
! | TTTTGATGTTGCATCCATGG+TGG | + | chr3_4:70331737-70331756 | Msa0518530:three_prime_UTR | 40.0% |
! | TGCATCCATGGTGGAAAAAT+TGG | + | chr3_4:70331746-70331765 | Msa0518530:three_prime_UTR | 40.0% |
! | GAAAAATTGATTTCCGCGTG+AGG | + | chr3_4:70331781-70331800 | Msa0518530:three_prime_UTR | 40.0% |
TTACACCAAAGATTACTCCC+CGG | - | chr3_4:70331823-70331842 | None:intergenic | 40.0% | |
ATTGGTGCAGATTTGCCTTG+AGG | - | chr3_4:70324462-70324481 | None:intergenic | 45.0% | |
! | GTGAAGAATGAGAGAGGTGT+CGG | + | chr3_4:70324741-70324760 | Msa0518530:CDS | 45.0% |
TCAGTAACCACACCTTTGAC+GGG | - | chr3_4:70324808-70324827 | None:intergenic | 45.0% | |
CTCAGTAACCACACCTTTGA+CGG | - | chr3_4:70324809-70324828 | None:intergenic | 45.0% | |
GGTAGCGTATGATCTAGTGA+AGG | + | chr3_4:70324954-70324973 | Msa0518530:intron | 45.0% | |
ATGTAGTGAGACTGAACCTG+AGG | + | chr3_4:70324979-70324998 | Msa0518530:intron | 45.0% | |
! | TGGTTAGAGATTGGCTCCAT+TGG | + | chr3_4:70325220-70325239 | Msa0518530:intron | 45.0% |
! | GGAGTTTGTAAGGGGTACAT+AGG | + | chr3_4:70325943-70325962 | Msa0518530:intron | 45.0% |
TGAGGATGAATCAGTTGGAG+CGG | - | chr3_4:70326581-70326600 | None:intergenic | 45.0% | |
GTCCTCTCTGATGAAAATGC+TGG | - | chr3_4:70326739-70326758 | None:intergenic | 45.0% | |
! | TCAGAGAGGACTAGCAGATA+TGG | + | chr3_4:70326748-70326767 | Msa0518530:CDS | 45.0% |
TTGTGTTTGACCACGGTGTT+GGG | - | chr3_4:70326783-70326802 | None:intergenic | 45.0% | |
CCTGAACTTGTGTTTGACCA+CGG | - | chr3_4:70326790-70326809 | None:intergenic | 45.0% | |
GGTCAAACACAAGTTCAGGT+TGG | + | chr3_4:70326791-70326810 | Msa0518530:CDS | 45.0% | |
AAGAAGGGGAAGTAGGCATT+TGG | - | chr3_4:70326969-70326988 | None:intergenic | 45.0% | |
ATATCTGCCCGAGAATTGAC+GGG | - | chr3_4:70327012-70327031 | None:intergenic | 45.0% | |
CATATCTGCCCGAGAATTGA+CGG | - | chr3_4:70327013-70327032 | None:intergenic | 45.0% | |
! | TTGGGAATATGTACTGGTCG+AGG | - | chr3_4:70327153-70327172 | None:intergenic | 45.0% |
AAACCATGAGCAGCAGCAAA+AGG | + | chr3_4:70327194-70327213 | Msa0518530:CDS | 45.0% | |
GAGAACAACAGAGACTTGAG+AGG | + | chr3_4:70327271-70327290 | Msa0518530:CDS | 45.0% | |
TGCTGCTGAGGCAAAGAAAA+GGG | + | chr3_4:70327473-70327492 | Msa0518530:intron | 45.0% | |
GGCAAAGAAAAGGGCTGAAA+AGG | + | chr3_4:70327482-70327501 | Msa0518530:intron | 45.0% | |
TTGAATCGTTCTTCAGCGTG+AGG | + | chr3_4:70327676-70327695 | Msa0518530:CDS | 45.0% | |
TGAATCGTTCTTCAGCGTGA+GGG | + | chr3_4:70327677-70327696 | Msa0518530:CDS | 45.0% | |
ACAGAAGAGTTAGACCTAGG+AGG | - | chr3_4:70327726-70327745 | None:intergenic | 45.0% | |
CTCACAGAAGAGTTAGACCT+AGG | - | chr3_4:70327729-70327748 | None:intergenic | 45.0% | |
! | CGTCATATAATTTGGGACGG+AGG | + | chr3_4:70328112-70328131 | Msa0518530:intron | 45.0% |
TGATGCACAATTTCAGCCAG+AGG | + | chr3_4:70328331-70328350 | Msa0518530:CDS | 45.0% | |
AAGACACAGTTGGAGGTTTC+TGG | - | chr3_4:70328361-70328380 | None:intergenic | 45.0% | |
TCCTGAAATTCTCCAGCTGA+GGG | - | chr3_4:70328560-70328579 | None:intergenic | 45.0% | |
TTCCTGAAATTCTCCAGCTG+AGG | - | chr3_4:70328561-70328580 | None:intergenic | 45.0% | |
AGAAAGGCGAAAAGCCAGAT+TGG | + | chr3_4:70328598-70328617 | Msa0518530:CDS | 45.0% | |
AGGAGAGAGTCTCTTCTCTA+AGG | - | chr3_4:70328869-70328888 | None:intergenic | 45.0% | |
TCTGCTCTCTTTGAGTCTGT+AGG | - | chr3_4:70329095-70329114 | None:intergenic | 45.0% | |
CCTGACACAGATGCATGTAT+TGG | - | chr3_4:70329270-70329289 | None:intergenic | 45.0% | |
CCAATACATGCATCTGTGTC+AGG | + | chr3_4:70329267-70329286 | Msa0518530:intron | 45.0% | |
GTGCAAATTAGCGGAGAACT+CGG | - | chr3_4:70329351-70329370 | None:intergenic | 45.0% | |
! | GAGTTCTCCGCTAATTTGCA+CGG | + | chr3_4:70329350-70329369 | Msa0518530:intron | 45.0% |
!! | TGGACTTTGAAGTTAAGCGC+TGG | + | chr3_4:70329447-70329466 | Msa0518530:CDS | 45.0% |
!! | GGACTTTGAAGTTAAGCGCT+GGG | + | chr3_4:70329448-70329467 | Msa0518530:CDS | 45.0% |
TCATTCGCTCTGCTCATTAC+AGG | + | chr3_4:70329711-70329730 | Msa0518530:intron | 45.0% | |
CAGGTATTATGGCCTGAATG+TGG | + | chr3_4:70330070-70330089 | Msa0518530:intron | 45.0% | |
TCCTGATAAAGTGCAGCAGA+AGG | + | chr3_4:70330174-70330193 | Msa0518530:CDS | 45.0% | |
CCTGATAAAGTGCAGCAGAA+GGG | + | chr3_4:70330175-70330194 | Msa0518530:CDS | 45.0% | |
AGGCCACTGTTATCTACATG+TGG | + | chr3_4:70330331-70330350 | Msa0518530:intron | 45.0% | |
GGCCACTGTTATCTACATGT+GGG | + | chr3_4:70330332-70330351 | Msa0518530:intron | 45.0% | |
CATCAGGAGCTCATGATTCA+AGG | - | chr3_4:70330556-70330575 | None:intergenic | 45.0% | |
!!! | TCCTGATGTTTTAGTGCTGC+TGG | + | chr3_4:70330568-70330587 | Msa0518530:intron | 45.0% |
! | TATGTTTGGAGGGAGGGTTT+TGG | + | chr3_4:70330837-70330856 | Msa0518530:intron | 45.0% |
!! | TTGGAGACTTTTGGAGGGAA+TGG | - | chr3_4:70331004-70331023 | None:intergenic | 45.0% |
!!! | GGGTTTTGGAGACTTTTGGA+GGG | - | chr3_4:70331009-70331028 | None:intergenic | 45.0% |
!!! | TGGGTTTTGGAGACTTTTGG+AGG | - | chr3_4:70331010-70331029 | None:intergenic | 45.0% |
! | CAAAGGGTATGTTTGGGAGT+TGG | - | chr3_4:70331030-70331049 | None:intergenic | 45.0% |
CAACTCCCAAACATACCCTT+TGG | + | chr3_4:70331028-70331047 | Msa0518530:intron | 45.0% | |
TCCCAAACATACCCTTTGGA+TGG | + | chr3_4:70331032-70331051 | Msa0518530:intron | 45.0% | |
! | CTCCATCCAAAGGGTATGTT+TGG | - | chr3_4:70331037-70331056 | None:intergenic | 45.0% |
CAAACATACCCTTTGGATGG+AGG | + | chr3_4:70331035-70331054 | Msa0518530:intron | 45.0% | |
GGTCCACTCTCAATTTAGTG+GGG | + | chr3_4:70331385-70331404 | Msa0518530:intron | 45.0% | |
TCTTGGACAGAGTGGTTCTT+TGG | - | chr3_4:70331501-70331520 | None:intergenic | 45.0% | |
CTGACGAACTTCACAACTTC+AGG | + | chr3_4:70331635-70331654 | Msa0518530:three_prime_UTR | 45.0% | |
TGCATAGCCAATTCCATGTG+GGG | + | chr3_4:70331671-70331690 | Msa0518530:three_prime_UTR | 45.0% | |
TTACACCGGGGAGTAATCTT+TGG | + | chr3_4:70331815-70331834 | Msa0518530:three_prime_UTR | 45.0% | |
ATATGCTATTCCGGGGAAGT+TGG | + | chr3_4:70331844-70331863 | Msa0518530:three_prime_UTR | 45.0% | |
TATGCTATTCCGGGGAAGTT+GGG | + | chr3_4:70331845-70331864 | Msa0518530:three_prime_UTR | 45.0% | |
!! | TAAAAGTTTAAATTATAAAT+GGG | - | chr3_4:70330516-70330535 | None:intergenic | 5.0% |
!! | ATAAAAGTTTAAATTATAAA+TGG | - | chr3_4:70330517-70330536 | None:intergenic | 5.0% |
CCTCTTTACGACGACGATGA+CGG | + | chr3_4:70324663-70324682 | Msa0518530:intron | 50.0% | |
! | GCGTTTGATGATCTTCTCGG+CGG | + | chr3_4:70324696-70324715 | Msa0518530:CDS | 50.0% |
! | GATGATCTTCTCGGCGGATT+CGG | + | chr3_4:70324702-70324721 | Msa0518530:CDS | 50.0% |
TGAGACTGAACCTGAGGTTG+AGG | + | chr3_4:70324985-70325004 | Msa0518530:intron | 50.0% | |
CACGTGTCAGTGTCAAACAC+CGG | - | chr3_4:70325118-70325137 | None:intergenic | 50.0% | |
CAGGGAATGCATGATATCGG+TGG | - | chr3_4:70325355-70325374 | None:intergenic | 50.0% | |
!! | GAGTTGGTTTGGAGGGAAAG+AGG | + | chr3_4:70325644-70325663 | Msa0518530:intron | 50.0% |
AGGGTCTTCTGTTGCATTGG+AGG | - | chr3_4:70326536-70326555 | None:intergenic | 50.0% | |
! | GCTCCAACTGATTCATCCTC+AGG | + | chr3_4:70326580-70326599 | Msa0518530:CDS | 50.0% |
TGGCCTGAGGATGAATCAGT+TGG | - | chr3_4:70326586-70326605 | None:intergenic | 50.0% | |
! | TGTGTTTGACCACGGTGTTG+GGG | - | chr3_4:70326782-70326801 | None:intergenic | 50.0% |
CTTGTGTTTGACCACGGTGT+TGG | - | chr3_4:70326784-70326803 | None:intergenic | 50.0% | |
CCGTGGTCAAACACAAGTTC+AGG | + | chr3_4:70326787-70326806 | Msa0518530:CDS | 50.0% | |
! | ATATGTACTGGTCGAGGAGG+AGG | - | chr3_4:70327147-70327166 | None:intergenic | 50.0% |
! | GGAATATGTACTGGTCGAGG+AGG | - | chr3_4:70327150-70327169 | None:intergenic | 50.0% |
CTGCTTCTCTCCTCTGACTT+GGG | - | chr3_4:70327171-70327190 | None:intergenic | 50.0% | |
ACTGCTTCTCTCCTCTGACT+TGG | - | chr3_4:70327172-70327191 | None:intergenic | 50.0% | |
! | TCTCCTTTTGCTGCTGCTCA+TGG | - | chr3_4:70327200-70327219 | None:intergenic | 50.0% |
TGAGCAGCAGCAAAAGGAGA+TGG | + | chr3_4:70327200-70327219 | Msa0518530:CDS | 50.0% | |
AAGCTAGAGTGCGTGCTGAA+AGG | + | chr3_4:70327409-70327428 | Msa0518530:CDS | 50.0% | |
AGCTAGAGTGCGTGCTGAAA+GGG | + | chr3_4:70327410-70327429 | Msa0518530:CDS | 50.0% | |
ACAAGCTGAAGCCCGTGAAA+GGG | + | chr3_4:70327449-70327468 | Msa0518530:intron | 50.0% | |
CTGCTGCTGAGGCAAAGAAA+AGG | + | chr3_4:70327472-70327491 | Msa0518530:intron | 50.0% | |
! | TAAAGCAGAACGTGCTGCTG+TGG | + | chr3_4:70327578-70327597 | Msa0518530:CDS | 50.0% |
! | AGAACGTGCTGCTGTGGAAA+GGG | + | chr3_4:70327584-70327603 | Msa0518530:CDS | 50.0% |
GAATCGTTCTTCAGCGTGAG+GGG | + | chr3_4:70327678-70327697 | Msa0518530:CDS | 50.0% | |
!! | GGAGGTTTCTGGTTTACCTC+TGG | - | chr3_4:70328350-70328369 | None:intergenic | 50.0% |
! | TTTGAAGCATCTCCCTCAGC+TGG | + | chr3_4:70328545-70328564 | Msa0518530:intron | 50.0% |
TCCCTCAGCTGGAGAATTTC+AGG | + | chr3_4:70328556-70328575 | Msa0518530:CDS | 50.0% | |
CAGATTGGAACGCCTTCAGA+GGG | + | chr3_4:70328613-70328632 | Msa0518530:CDS | 50.0% | |
CTGTATGAGCAGAAACCACC+CGG | - | chr3_4:70329167-70329186 | None:intergenic | 50.0% | |
AGCATAAGGCAGCAAACCCT+GGG | - | chr3_4:70329550-70329569 | None:intergenic | 50.0% | |
TAGCATAAGGCAGCAAACCC+TGG | - | chr3_4:70329551-70329570 | None:intergenic | 50.0% | |
ACCTCATTGCTCCTACTCAG+TGG | + | chr3_4:70329647-70329666 | Msa0518530:intron | 50.0% | |
TCCACTGAGTAGGAGCAATG+AGG | - | chr3_4:70329651-70329670 | None:intergenic | 50.0% | |
GGCTGCTTCAAGATTCACGA+AGG | - | chr3_4:70329955-70329974 | None:intergenic | 50.0% | |
CCCTTCTGCTGCACTTTATC+AGG | - | chr3_4:70330178-70330197 | None:intergenic | 50.0% | |
GCCAGCAGCACTAAAACATC+AGG | - | chr3_4:70330572-70330591 | None:intergenic | 50.0% | |
! | GCTGGCGAGTCGATCTTTTT+CGG | + | chr3_4:70330586-70330605 | Msa0518530:intron | 50.0% |
!!! | CGAGTCGATCTTTTTCGGCT+AGG | + | chr3_4:70330591-70330610 | Msa0518530:intron | 50.0% |
TTGGGGTATGTTTGGAGGGA+GGG | + | chr3_4:70330831-70330850 | Msa0518530:intron | 50.0% | |
!!! | TTTGGAGGGAGGGTTTTGGA+GGG | + | chr3_4:70330841-70330860 | Msa0518530:intron | 50.0% |
TCCAAAGCCCTCCATCCAAA+GGG | - | chr3_4:70331046-70331065 | None:intergenic | 50.0% | |
!!! | TTTGGGAGTGGGGTTTTGGA+GGG | - | chr3_4:70331222-70331241 | None:intergenic | 50.0% |
! | TCTGTTTGGGAGTGGGGTTT+TGG | - | chr3_4:70331226-70331245 | None:intergenic | 50.0% |
AAAGGGTCTGTTTGGGAGTG+GGG | - | chr3_4:70331232-70331251 | None:intergenic | 50.0% | |
CAAAGGGTCTGTTTGGGAGT+GGG | - | chr3_4:70331233-70331252 | None:intergenic | 50.0% | |
ACAAAGGGTCTGTTTGGGAG+TGG | - | chr3_4:70331234-70331253 | None:intergenic | 50.0% | |
CTGCTGCTAGCGGAAAATAC+AGG | - | chr3_4:70331308-70331327 | None:intergenic | 50.0% | |
GCATAGCCAATTCCATGTGG+GGG | + | chr3_4:70331672-70331691 | Msa0518530:three_prime_UTR | 50.0% | |
CATAGCCAATTCCATGTGGG+GGG | + | chr3_4:70331673-70331692 | Msa0518530:three_prime_UTR | 50.0% | |
AATTCCATGTGGGGGGACAA+CGG | + | chr3_4:70331680-70331699 | Msa0518530:three_prime_UTR | 50.0% | |
AGGATGCCCAAAGGTTACAC+CGG | + | chr3_4:70331801-70331820 | Msa0518530:three_prime_UTR | 50.0% | |
TACTCCCCGGTGTAACCTTT+GGG | - | chr3_4:70331810-70331829 | None:intergenic | 50.0% | |
TTACTCCCCGGTGTAACCTT+TGG | - | chr3_4:70331811-70331830 | None:intergenic | 50.0% | |
CCGTATAAACCCAACTTCCC+CGG | - | chr3_4:70331857-70331876 | None:intergenic | 50.0% | |
CCGGGGAAGTTGGGTTTATA+CGG | + | chr3_4:70331854-70331873 | Msa0518530:three_prime_UTR | 50.0% | |
GACGGACATGGAAGCGAAAC+CGG | - | chr3_4:70324622-70324641 | None:intergenic | 55.0% | |
! | AACAGGCGAGTTGACGGACA+TGG | - | chr3_4:70324634-70324653 | None:intergenic | 55.0% |
CCGTCATCGTCGTCGTAAAG+AGG | - | chr3_4:70324666-70324685 | None:intergenic | 55.0% | |
GGAACAAGTCCTCCCGTCAA+AGG | + | chr3_4:70324793-70324812 | Msa0518530:CDS | 55.0% | |
AAGTCCTCCCGTCAAAGGTG+TGG | + | chr3_4:70324798-70324817 | Msa0518530:intron | 55.0% | |
GTAACCACACCTTTGACGGG+AGG | - | chr3_4:70324805-70324824 | None:intergenic | 55.0% | |
!! | CAAGTGTCGGCGTGTGAGTA+TGG | - | chr3_4:70325042-70325061 | None:intergenic | 55.0% |
CACAGGCCCACTCCTGATAT+TGG | + | chr3_4:70326472-70326491 | Msa0518530:intron | 55.0% | |
TGGGTCTGAAAAGTGGCCTG+AGG | - | chr3_4:70326599-70326618 | None:intergenic | 55.0% | |
! | TGACCACGGTGTTGGGGAAT+CGG | - | chr3_4:70326776-70326795 | None:intergenic | 55.0% |
GTAGGCATTTGGCCAGCTAC+TGG | - | chr3_4:70326958-70326977 | None:intergenic | 55.0% | |
!! | GAAGGTGGTGGAGCAGAAGT+TGG | - | chr3_4:70327117-70327136 | None:intergenic | 55.0% |
GCAGCAGCAAAAGGAGATGG+AGG | + | chr3_4:70327203-70327222 | Msa0518530:CDS | 55.0% | |
AGCTCGCCAAAGAGCTGAGA+AGG | + | chr3_4:70327362-70327381 | Msa0518530:CDS | 55.0% | |
CAGCAGCCTTCTCAGCTCTT+TGG | - | chr3_4:70327371-70327390 | None:intergenic | 55.0% | |
TGAAAGGGCCGCTGTTCAGA+GGG | + | chr3_4:70327425-70327444 | Msa0518530:intron | 55.0% | |
AGCTTGTGCCCTCTGAACAG+CGG | - | chr3_4:70327436-70327455 | None:intergenic | 55.0% | |
CACAAGCTGAAGCCCGTGAA+AGG | + | chr3_4:70327448-70327467 | Msa0518530:intron | 55.0% | |
AAAGGCTGCTGCAGGGGAAA+AGG | + | chr3_4:70327500-70327519 | Msa0518530:intron | 55.0% | |
GAGAAAGAGCTGCAGCTGCA+AGG | + | chr3_4:70327535-70327554 | Msa0518530:CDS | 55.0% | |
! | CAGAACGTGCTGCTGTGGAA+AGG | + | chr3_4:70327583-70327602 | Msa0518530:CDS | 55.0% |
AGCAGCTGCAGCTCTTTCTC+GGG | - | chr3_4:70327622-70327641 | None:intergenic | 55.0% | |
CAGCAGCTGCAGCTCTTTCT+CGG | - | chr3_4:70327623-70327642 | None:intergenic | 55.0% | |
GAGTTAGACCTAGGAGGCCT+TGG | - | chr3_4:70327720-70327739 | None:intergenic | 55.0% | |
!! | CCTCTGAAGGCGTTCCAATC+TGG | - | chr3_4:70328615-70328634 | None:intergenic | 55.0% |
CCAGATTGGAACGCCTTCAG+AGG | + | chr3_4:70328612-70328631 | Msa0518530:CDS | 55.0% | |
TCAGAGGCTTGCGGAAACAC+TGG | + | chr3_4:70329427-70329446 | Msa0518530:intron | 55.0% | |
!! | AAGTTAAGCGCTGGGCTGCA+GGG | + | chr3_4:70329456-70329475 | Msa0518530:CDS | 55.0% |
ATGGCCTGAATGTGGTTGGC+AGG | + | chr3_4:70330078-70330097 | Msa0518530:CDS | 55.0% | |
ACTGCCTGCCAACCACATTC+AGG | - | chr3_4:70330085-70330104 | None:intergenic | 55.0% | |
CTTGGGGTATGTTTGGAGGG+AGG | + | chr3_4:70330830-70330849 | Msa0518530:intron | 55.0% | |
!! | GTTTGGAGGGAGGGTTTTGG+AGG | + | chr3_4:70330840-70330859 | Msa0518530:intron | 55.0% |
ACCCTTTGGATGGAGGGCTT+TGG | + | chr3_4:70331042-70331061 | Msa0518530:intron | 55.0% | |
CTCCAAAGCCCTCCATCCAA+AGG | - | chr3_4:70331047-70331066 | None:intergenic | 55.0% | |
! | CTTTGGATGGAGGGCTTTGG+AGG | + | chr3_4:70331045-70331064 | Msa0518530:intron | 55.0% |
!!! | TTGGGAGTGGGGTTTTGGAG+GGG | - | chr3_4:70331221-70331240 | None:intergenic | 55.0% |
!! | GTTTGGGAGTGGGGTTTTGG+AGG | - | chr3_4:70331223-70331242 | None:intergenic | 55.0% |
GTTGTCCCCCCACATGGAAT+TGG | - | chr3_4:70331681-70331700 | None:intergenic | 55.0% | |
AACCTTTGGGCATCCTCACG+CGG | - | chr3_4:70331797-70331816 | None:intergenic | 55.0% | |
GGATGCCCAAAGGTTACACC+GGG | + | chr3_4:70331802-70331821 | Msa0518530:three_prime_UTR | 55.0% | |
GATGCCCAAAGGTTACACCG+GGG | + | chr3_4:70331803-70331822 | Msa0518530:three_prime_UTR | 55.0% | |
!! | CCGGAGGTGCTACGAGAGAT+GGG | - | chr3_4:70324603-70324622 | None:intergenic | 60.0% |
CCCATCTCTCGTAGCACCTC+CGG | + | chr3_4:70324600-70324619 | Msa0518530:CDS | 60.0% | |
!! | ACCGGAGGTGCTACGAGAGA+TGG | - | chr3_4:70324604-70324623 | None:intergenic | 60.0% |
GGACATGGAAGCGAAACCGG+AGG | - | chr3_4:70324619-70324638 | None:intergenic | 60.0% | |
! | GGAGGTGGTCTTGAAGGTGG+TGG | - | chr3_4:70327129-70327148 | None:intergenic | 60.0% |
! | GGAGGAGGTGGTCTTGAAGG+TGG | - | chr3_4:70327132-70327151 | None:intergenic | 60.0% |
! | CGAGGAGGAGGTGGTCTTGA+AGG | - | chr3_4:70327135-70327154 | None:intergenic | 60.0% |
! | TGTACTGGTCGAGGAGGAGG+TGG | - | chr3_4:70327144-70327163 | None:intergenic | 60.0% |
CTGAAAGGGCCGCTGTTCAG+AGG | + | chr3_4:70327424-70327443 | Msa0518530:intron | 60.0% | |
CTCAGCAGCAGCCCTTTCAC+GGG | - | chr3_4:70327463-70327482 | None:intergenic | 60.0% | |
CCTCAGCAGCAGCCCTTTCA+CGG | - | chr3_4:70327464-70327483 | None:intergenic | 60.0% | |
AGGGCTGAAAAGGCTGCTGC+AGG | + | chr3_4:70327492-70327511 | Msa0518530:intron | 60.0% | |
GGGCTGAAAAGGCTGCTGCA+GGG | + | chr3_4:70327493-70327512 | Msa0518530:intron | 60.0% | |
GGCTGAAAAGGCTGCTGCAG+GGG | + | chr3_4:70327494-70327513 | Msa0518530:intron | 60.0% | |
TGTGGAAAGGGCTGCTGCAG+AGG | + | chr3_4:70327596-70327615 | Msa0518530:CDS | 60.0% | |
CGTTCTTCAGCGTGAGGGGA+CGG | + | chr3_4:70327682-70327701 | Msa0518530:CDS | 60.0% | |
GTTCTTCAGCGTGAGGGGAC+GGG | + | chr3_4:70327683-70327702 | Msa0518530:CDS | 60.0% | |
! | AGGAGGCCTTGGAGCGCTAT+TGG | - | chr3_4:70327709-70327728 | None:intergenic | 60.0% |
ATAGCGCTCCAAGGCCTCCT+AGG | + | chr3_4:70327709-70327728 | Msa0518530:CDS | 60.0% | |
!! | GAAGTTAAGCGCTGGGCTGC+AGG | + | chr3_4:70329455-70329474 | Msa0518530:CDS | 60.0% |
!!! | GAGGGAGGGTTTTGGAGGGA+AGG | + | chr3_4:70330845-70330864 | Msa0518530:intron | 60.0% |
!! | TGGATGGAGGGCTTTGGAGG+AGG | + | chr3_4:70331048-70331067 | Msa0518530:intron | 60.0% |
!! | GGATGGAGGGCTTTGGAGGA+GGG | + | chr3_4:70331049-70331068 | Msa0518530:intron | 60.0% |
!! | GATGGAGGGCTTTGGAGGAG+GGG | + | chr3_4:70331050-70331069 | Msa0518530:intron | 60.0% |
!!! | GAGTGGGGTTTTGGAGGGGA+GGG | - | chr3_4:70331217-70331236 | None:intergenic | 60.0% |
TTCCGCGTGAGGATGCCCAA+AGG | + | chr3_4:70331792-70331811 | Msa0518530:three_prime_UTR | 60.0% | |
!! | GCACCGATTCCCCAACACCG+TGG | + | chr3_4:70326770-70326789 | Msa0518530:CDS | 65.0% |
CCGTGAAAGGGCTGCTGCTG+AGG | + | chr3_4:70327461-70327480 | Msa0518530:intron | 65.0% | |
GACGGGCCAATAGCGCTCCA+AGG | + | chr3_4:70327700-70327719 | Msa0518530:CDS | 65.0% | |
GGAACGCCTTCAGAGGGCTC+AGG | + | chr3_4:70328619-70328638 | Msa0518530:CDS | 65.0% | |
CGCTGGGCTGCAGGGAAAGA+GGG | + | chr3_4:70329464-70329483 | Msa0518530:CDS | 65.0% | |
GCTGGGCTGCAGGGAAAGAG+GGG | + | chr3_4:70329465-70329484 | Msa0518530:CDS | 65.0% | |
!!! | GGAGTGGGGTTTTGGAGGGG+AGG | - | chr3_4:70331218-70331237 | None:intergenic | 65.0% |
CGCGCTCCTGAGCCCTCTGA+AGG | - | chr3_4:70328628-70328647 | None:intergenic | 70.0% | |
! | TCAGAGGGCTCAGGAGCGCG+CGG | + | chr3_4:70328628-70328647 | Msa0518530:CDS | 70.0% |
GCGCTGGGCTGCAGGGAAAG+AGG | + | chr3_4:70329463-70329482 | Msa0518530:CDS | 70.0% | |
ACGGCCGTTGTCCCCCCACA+TGG | - | chr3_4:70331687-70331706 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 70324414 | 70332030 | 70324414 | ID=Msa0518530;Name=Msa0518530 |
chr3_4 | mRNA | 70324414 | 70332030 | 70324414 | ID=Msa0518530-mRNA-1;Parent=Msa0518530;Name=Msa0518530-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.58|0.46|1|0.5|0.38|13|398|664 |
chr3_4 | exon | 70324414 | 70324634 | 70324414 | ID=Msa0518530-mRNA-1:exon:19016;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70324689 | 70324814 | 70324689 | ID=Msa0518530-mRNA-1:exon:19017;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70326477 | 70326685 | 70326477 | ID=Msa0518530-mRNA-1:exon:19018;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70326692 | 70326902 | 70326692 | ID=Msa0518530-mRNA-1:exon:19019;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70327008 | 70327172 | 70327008 | ID=Msa0518530-mRNA-1:exon:19020;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70327191 | 70327437 | 70327191 | ID=Msa0518530-mRNA-1:exon:19021;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70327522 | 70327743 | 70327522 | ID=Msa0518530-mRNA-1:exon:19022;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70328320 | 70328443 | 70328320 | ID=Msa0518530-mRNA-1:exon:19023;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70328552 | 70328649 | 70328552 | ID=Msa0518530-mRNA-1:exon:19024;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70329060 | 70329125 | 70329060 | ID=Msa0518530-mRNA-1:exon:19025;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70329431 | 70329520 | 70329431 | ID=Msa0518530-mRNA-1:exon:19026;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70330073 | 70330249 | 70330073 | ID=Msa0518530-mRNA-1:exon:19027;Parent=Msa0518530-mRNA-1 |
chr3_4 | exon | 70331594 | 70332030 | 70331594 | ID=Msa0518530-mRNA-1:exon:19028;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70324414 | 70324634 | 70324414 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70324689 | 70324814 | 70324689 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70326477 | 70326685 | 70326477 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70326692 | 70326902 | 70326692 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70327008 | 70327172 | 70327008 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70327191 | 70327437 | 70327191 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70327522 | 70327743 | 70327522 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70328320 | 70328443 | 70328320 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70328552 | 70328649 | 70328552 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70329060 | 70329125 | 70329060 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70329431 | 70329520 | 70329431 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70330073 | 70330249 | 70330073 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | CDS | 70331594 | 70331632 | 70331594 | ID=Msa0518530-mRNA-1:cds;Parent=Msa0518530-mRNA-1 |
chr3_4 | three_prime_UTR | 70331633 | 70332030 | 70331633 | ID=Msa0518530-mRNA-1:three_prime_utr;Parent=Msa0518530-mRNA-1 |
Gene Sequence |
Protein sequence |