Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391250 | XP_003629450.1 | 98.354 | 243 | 4 | 0 | 1 | 243 | 2 | 244 | 1.76e-174 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391250 | sp|Q5BLD8|MT21A_DANRE | 33.758 | 157 | 92 | 6 | 86 | 241 | 68 | 213 | 1.39e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391250 | G7LES3 | 98.354 | 243 | 4 | 0 | 1 | 243 | 2 | 244 | 8.39e-175 | 490 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034100 | Msa0391250 | -0.805727 | 1.160717e-49 | -8.615850e-47 |
| Msa0045620 | Msa0391250 | 0.818938 | 1.509524e-52 | -8.615850e-47 |
| Msa0073270 | Msa0391250 | 0.801966 | 7.017368e-49 | -8.615850e-47 |
| Msa0087130 | Msa0391250 | -0.809129 | 2.203560e-50 | -8.615850e-47 |
| Msa0128110 | Msa0391250 | -0.805296 | 1.429587e-49 | -8.615850e-47 |
| Msa0371350 | Msa0391250 | -0.807894 | 4.045052e-50 | -8.615850e-47 |
| Msa0372100 | Msa0391250 | 0.801515 | 8.680844e-49 | -8.615850e-47 |
| Msa0372990 | Msa0391250 | -0.818002 | 2.460515e-52 | -8.615850e-47 |
| Msa0391250 | Msa0419420 | -0.814155 | 1.778796e-51 | -8.615850e-47 |
| Msa0391250 | Msa0457070 | -0.802833 | 4.649497e-49 | -8.615850e-47 |
| Msa0391250 | Msa0504360 | -0.800737 | 1.252516e-48 | -8.615850e-47 |
| Msa0391250 | Msa0568460 | -0.800581 | 1.347840e-48 | -8.615850e-47 |
| Msa0391250 | Msa0598470 | -0.814921 | 1.204432e-51 | -8.615850e-47 |
| Msa0391250 | Msa0619390 | -0.800669 | 1.293100e-48 | -8.615850e-47 |
| Msa0391250 | Msa0623310 | 0.801913 | 7.194830e-49 | -8.615850e-47 |
| Msa0391250 | Msa0685390 | -0.820178 | 7.866850e-53 | -8.615850e-47 |
| Msa0391250 | Msa0714060 | -0.816550 | 5.218577e-52 | -8.615850e-47 |
| Msa0391250 | Msa0714200 | -0.813630 | 2.322609e-51 | -8.615850e-47 |
| Msa0391250 | Msa0714230 | -0.808773 | 2.626788e-50 | -8.615850e-47 |
| Msa0391250 | Msa0730250 | -0.820259 | 7.538683e-53 | -8.615850e-47 |
| Msa0391250 | Msa0756440 | -0.809098 | 2.238104e-50 | -8.615850e-47 |
| Msa0391250 | Msa0999480 | -0.811112 | 8.238640e-51 | -8.615850e-47 |
| Msa0391250 | Msa1076830 | 0.808815 | 2.572620e-50 | -8.615850e-47 |
| Msa0391250 | Msa1078300 | 0.807399 | 5.152417e-50 | -8.615850e-47 |
| Msa0391250 | Msa1078590 | -0.813502 | 2.478548e-51 | -8.615850e-47 |
| Msa0391250 | Msa1078760 | -0.807157 | 5.798760e-50 | -8.615850e-47 |
| Msa0391250 | Msa1196210 | -0.811791 | 5.866734e-51 | -8.615850e-47 |
| Msa0391250 | Msa1202220 | -0.832002 | 1.212060e-55 | -8.615850e-47 |
| Msa0391250 | Msa1240240 | -0.812756 | 3.612108e-51 | -8.615850e-47 |
| Msa0391250 | Msa1288970 | -0.812018 | 5.235335e-51 | -8.615850e-47 |
| Msa0391250 | Msa1297220 | -0.800972 | 1.121566e-48 | -8.615850e-47 |
| Msa0391250 | Msa1317240 | -0.812984 | 3.219908e-51 | -8.615850e-47 |
| Msa0391250 | Msa1343450 | -0.807347 | 5.284172e-50 | -8.615850e-47 |
| Msa0391250 | Msa1371800 | 0.813901 | 2.023691e-51 | -8.615850e-47 |
| Msa0391250 | Msa1372030 | 0.806941 | 6.440425e-50 | -8.615850e-47 |
| Msa0391250 | Msa1376070 | 0.803840 | 2.876415e-49 | -8.615850e-47 |
| Msa0391250 | Msa1376310 | 0.814676 | 1.364359e-51 | -8.615850e-47 |
| Msa0391250 | Msa1388270 | -0.814682 | 1.360330e-51 | -8.615850e-47 |
| Msa0391250 | Msa1414000 | -0.806832 | 6.791335e-50 | -8.615850e-47 |
| Msa0391250 | Msa1427600 | -0.838086 | 3.544523e-57 | -8.615850e-47 |
| Msa0391250 | Msa1430630 | -0.804741 | 1.868000e-49 | -8.615850e-47 |
| Msa0391250 | Msa1438510 | 0.815843 | 7.510509e-52 | -8.615850e-47 |
| Msa0391250 | Msa1459630 | -0.802231 | 6.187628e-49 | -8.615850e-47 |
| Msa0336520 | Msa0391250 | 0.807457 | 5.006744e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391250 | MtrunA17_Chr8g0373321 | 98.354 | 243 | 4 | 0 | 1 | 243 | 2 | 244 | 1.61e-178 | 490 |
| Msa0391250 | MtrunA17_Chr4g0028291 | 38.000 | 100 | 57 | 2 | 86 | 181 | 67 | 165 | 1.43e-15 | 74.7 |
| Msa0391250 | MtrunA17_Chr6g0478091 | 35.878 | 131 | 82 | 2 | 86 | 216 | 115 | 243 | 2.04e-14 | 71.2 |
| Msa0391250 | MtrunA17_Chr2g0324971 | 25.806 | 186 | 127 | 4 | 38 | 217 | 16 | 196 | 6.62e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391250 | AT5G49560.1 | 63.636 | 220 | 77 | 2 | 25 | 241 | 45 | 264 | 6.17e-97 | 285 |
| Msa0391250 | AT3G50850.1 | 60.000 | 225 | 81 | 2 | 25 | 240 | 23 | 247 | 6.50e-88 | 261 |
| Msa0391250 | AT1G08125.2 | 40.594 | 101 | 54 | 2 | 86 | 181 | 74 | 173 | 5.25e-14 | 70.9 |
| Msa0391250 | AT1G08125.1 | 40.594 | 101 | 54 | 2 | 86 | 181 | 67 | 166 | 6.55e-14 | 70.5 |
| Msa0391250 | AT1G73320.1 | 34.351 | 131 | 84 | 2 | 86 | 216 | 148 | 276 | 2.97e-13 | 68.6 |
| Msa0391250 | AT4G35987.1 | 33.594 | 128 | 69 | 5 | 86 | 211 | 130 | 243 | 5.55e-12 | 65.1 |
| Msa0391250 | AT5G44170.1 | 31.452 | 124 | 80 | 3 | 86 | 208 | 72 | 191 | 9.56e-11 | 60.5 |
Find 92 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTATCATGATCATCTTTA+TGG | 0.232940 | 3_2:-2745672 | Msa0391250:CDS |
| CGACATGAGGGAGGTCGGTT+AGG | 0.297469 | 3_2:+2745844 | None:intergenic |
| TGTACAAGATTCGTTGAATC+TGG | 0.321018 | 3_2:-2745331 | Msa0391250:CDS |
| TCATATGAAGAGATGGAAAA+AGG | 0.321690 | 3_2:-2745589 | Msa0391250:CDS |
| TGGTGGTGGGGTTGAGGCGG+TGG | 0.326124 | 3_2:+2745982 | None:intergenic |
| AATGGGTTTGAAGTAGTTCT+AGG | 0.327604 | 3_2:+2746111 | None:intergenic |
| TTGGGTTGTACGGTGGGGAA+TGG | 0.361161 | 3_2:+2746146 | None:intergenic |
| TGGGTTGTACGGTGGGGAAT+GGG | 0.374840 | 3_2:+2746147 | None:intergenic |
| TTCTAGGTTAGGTAGTAGAT+TGG | 0.375710 | 3_2:+2746127 | None:intergenic |
| ATTGGATCGAATGGAGGAAA+TGG | 0.384082 | 3_2:+2746093 | None:intergenic |
| AAGGTCTCTCCTTCCAGCTC+TGG | 0.385465 | 3_2:-2746040 | Msa0391250:CDS |
| CATGTTGATGCTCCTTGTAA+TGG | 0.391114 | 3_2:-2745516 | Msa0391250:CDS |
| GACCGTTGATTGAAACGTTA+AGG | 0.398670 | 3_2:-2745650 | Msa0391250:CDS |
| TTCCGCGTTGAATTTGAGAT+TGG | 0.401989 | 3_2:+2745818 | None:intergenic |
| GGCTGGTGGTGGGGTTGAGG+CGG | 0.411611 | 3_2:+2745979 | None:intergenic |
| AAGGTTGATGTTGATTAAGA+AGG | 0.425856 | 3_2:-2745631 | Msa0391250:CDS |
| AGGTGGCGGCGGGCCAGAGC+TGG | 0.426838 | 3_2:+2746027 | None:intergenic |
| TTGGATCGAATGGAGGAAAT+GGG | 0.432200 | 3_2:+2746094 | None:intergenic |
| GGGATGAGAGGACGGTTGAG+AGG | 0.439294 | 3_2:+2745955 | None:intergenic |
| CTCGAACTCGGCTCCGGCAC+CGG | 0.450903 | 3_2:-2745912 | Msa0391250:CDS |
| TACATTTGCATCCCTTAGGT+GGG | 0.451205 | 3_2:-2745757 | Msa0391250:CDS |
| TGCGACTATGCCGACGATGC+CGG | 0.452730 | 3_2:+2745893 | None:intergenic |
| GACATGAGGGAGGTCGGTTA+GGG | 0.453142 | 3_2:+2745845 | None:intergenic |
| GAATGGGTTTGTTTCTTCGT+CGG | 0.457936 | 3_2:+2746163 | None:intergenic |
| TCCGCGTTGAATTTGAGATT+GGG | 0.458899 | 3_2:+2745819 | None:intergenic |
| AGCGAATGGTGACCGTTGAT+TGG | 0.465364 | 3_2:+2746075 | None:intergenic |
| GTGTTACATTTGCATCCCTT+AGG | 0.471445 | 3_2:-2745761 | Msa0391250:CDS |
| TCTAGGTTAGGTAGTAGATT+GGG | 0.472407 | 3_2:+2746128 | None:intergenic |
| CCTTGTAATGGTTCTAGAGT+TGG | 0.477461 | 3_2:-2745504 | Msa0391250:CDS |
| GCTGCTGACGTGGAAATGAT+TGG | 0.487077 | 3_2:-2745729 | Msa0391250:CDS |
| AGTAGATTGGGTTGTACGGT+GGG | 0.490201 | 3_2:+2746140 | None:intergenic |
| GGATGAGAGGACGGTTGAGA+GGG | 0.493620 | 3_2:+2745956 | None:intergenic |
| GTTTGAAGTAGTTCTAGGTT+AGG | 0.494695 | 3_2:+2746116 | None:intergenic |
| GAGAGTGACGAGAGAGGTGG+CGG | 0.502138 | 3_2:+2746013 | None:intergenic |
| TTACATTTGCATCCCTTAGG+TGG | 0.512061 | 3_2:-2745758 | Msa0391250:CDS |
| AGTGACGAGAGAGGTGGCGG+CGG | 0.513358 | 3_2:+2746016 | None:intergenic |
| CGGTGCCGGAGCCGAGTTCG+AGG | 0.513484 | 3_2:+2745913 | None:intergenic |
| AGAGCTGGAAGGAGAGACCT+TGG | 0.513855 | 3_2:+2746042 | None:intergenic |
| GGCTCCGGCACCGGCATCGT+CGG | 0.521008 | 3_2:-2745903 | Msa0391250:CDS |
| AACCTTAACGTTTCAATCAA+CGG | 0.521759 | 3_2:+2745648 | None:intergenic |
| CAGCAGCATGACCCCACCTA+AGG | 0.524506 | 3_2:+2745745 | None:intergenic |
| ACATTTGCATCCCTTAGGTG+GGG | 0.525685 | 3_2:-2745756 | Msa0391250:CDS |
| CGCATCCTCGAACTCGGCTC+CGG | 0.529068 | 3_2:-2745918 | Msa0391250:CDS |
| TAGTAGATTGGGTTGTACGG+TGG | 0.531896 | 3_2:+2746139 | None:intergenic |
| GTGACGAGAGAGGTGGCGGC+GGG | 0.537096 | 3_2:+2746017 | None:intergenic |
| TTGAGATTGGGAACGACATG+AGG | 0.538585 | 3_2:+2745831 | None:intergenic |
| TATGCCGACGATGCCGGTGC+CGG | 0.538683 | 3_2:+2745899 | None:intergenic |
| GGTTGAGGCGGTGGTTGTCG+AGG | 0.542097 | 3_2:+2745991 | None:intergenic |
| GAGCTGGAAGGAGAGACCTT+GGG | 0.542111 | 3_2:+2746043 | None:intergenic |
| GGAAGCTAATGCAGAAGCTG+TGG | 0.551048 | 3_2:-2745799 | Msa0391250:CDS |
| GGATGCGTGGTGGAGTGTGG+AGG | 0.551752 | 3_2:+2745934 | None:intergenic |
| GGTTACGTTTGTTCCGAGTG+TGG | 0.553433 | 3_2:+2745866 | None:intergenic |
| AGGTAGTAGATTGGGTTGTA+CGG | 0.554183 | 3_2:+2746136 | None:intergenic |
| AGTGTGGAGGGATGAGAGGA+CGG | 0.557662 | 3_2:+2745947 | None:intergenic |
| GTACAAGATTCGTTGAATCT+GGG | 0.558147 | 3_2:-2745330 | Msa0391250:CDS |
| GCAGAAGCTGTGGGGTCCAA+CGG | 0.558756 | 3_2:-2745789 | Msa0391250:CDS |
| GAAGCTAATGCAGAAGCTGT+GGG | 0.560553 | 3_2:-2745798 | Msa0391250:CDS |
| AGCAGCATGACCCCACCTAA+GGG | 0.580922 | 3_2:+2745746 | None:intergenic |
| CGAGGATGCGTGGTGGAGTG+TGG | 0.584139 | 3_2:+2745931 | None:intergenic |
| GGAAGGAGAGACCTTGGGAT+GGG | 0.584360 | 3_2:+2746048 | None:intergenic |
| GATGCGTGGTGGAGTGTGGA+GGG | 0.585713 | 3_2:+2745935 | None:intergenic |
| ATGAGAGGACGGTTGAGAGG+GGG | 0.592476 | 3_2:+2745958 | None:intergenic |
| ATAGTCGCAGCCGCCACACT+CGG | 0.593103 | 3_2:-2745879 | Msa0391250:CDS |
| GTGGAGTGTGGAGGGATGAG+AGG | 0.594192 | 3_2:+2745943 | None:intergenic |
| TGATGGCTCATATGAAGAGA+TGG | 0.595555 | 3_2:-2745596 | Msa0391250:CDS |
| TGGAAGGAGAGACCTTGGGA+TGG | 0.597890 | 3_2:+2746047 | None:intergenic |
| CCTCCATTCGATCCAATCAA+CGG | 0.598452 | 3_2:-2746087 | Msa0391250:CDS |
| GAAGGAGATTGTGTTTGTGA+TGG | 0.598982 | 3_2:-2745613 | Msa0391250:CDS |
| CCACCACGCATCCTCGAACT+CGG | 0.602197 | 3_2:-2745924 | Msa0391250:CDS |
| GGCGGCGGGCCAGAGCTGGA+AGG | 0.605814 | 3_2:+2746031 | None:intergenic |
| CCAACTCTAGAACCATTACA+AGG | 0.607697 | 3_2:+2745504 | None:intergenic |
| TACGTTTGTTCCGAGTGTGG+CGG | 0.608058 | 3_2:+2745869 | None:intergenic |
| TGACCGTTGATTGGATCGAA+TGG | 0.614537 | 3_2:+2746084 | None:intergenic |
| GGGAACGACATGAGGGAGGT+CGG | 0.619817 | 3_2:+2745839 | None:intergenic |
| CCGTTGATTGGATCGAATGG+AGG | 0.620603 | 3_2:+2746087 | None:intergenic |
| GTGGGGTCATGCTGCTGACG+TGG | 0.622445 | 3_2:-2745739 | Msa0391250:CDS |
| GATGAGAGGACGGTTGAGAG+GGG | 0.622586 | 3_2:+2745957 | None:intergenic |
| ATTCGCTCACTCCCATCCCA+AGG | 0.623289 | 3_2:-2746059 | Msa0391250:CDS |
| GTCGAGGAGAGTGACGAGAG+AGG | 0.625636 | 3_2:+2746007 | None:intergenic |
| TGAGATTGGGAACGACATGA+GGG | 0.626581 | 3_2:+2745832 | None:intergenic |
| GAGCCGAGTTCGAGGATGCG+TGG | 0.630016 | 3_2:+2745921 | None:intergenic |
| GTAGATTGGGTTGTACGGTG+GGG | 0.630154 | 3_2:+2746141 | None:intergenic |
| AAATGTAACACTACCACCGT+TGG | 0.630967 | 3_2:+2745773 | None:intergenic |
| GCTGACGTGGAAATGATTGG+AGG | 0.636522 | 3_2:-2745726 | Msa0391250:CDS |
| TTGGGATGGGAGTGAGCGAA+TGG | 0.644190 | 3_2:+2746061 | None:intergenic |
| GAGGAGAGTGACGAGAGAGG+TGG | 0.651742 | 3_2:+2746010 | None:intergenic |
| CCGAGTTCGAGGATGCGTGG+TGG | 0.663217 | 3_2:+2745924 | None:intergenic |
| GAAGCTGTGGGGTCCAACGG+TGG | 0.664465 | 3_2:-2745786 | Msa0391250:CDS |
| TGTTGTGATAGCTTCAGATG+TGG | 0.670595 | 3_2:-2745694 | Msa0391250:CDS |
| GATTGGGAACGACATGAGGG+AGG | 0.688587 | 3_2:+2745835 | None:intergenic |
| AAGCTAATGCAGAAGCTGTG+GGG | 0.711870 | 3_2:-2745797 | Msa0391250:CDS |
| TCCCAATCTCAAATTCAACG+CGG | 0.795443 | 3_2:-2745820 | Msa0391250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATATAAACTTGAAA+TGG | + | chr3_2:2746066-2746085 | None:intergenic | 15.0% |
| !! | AAACAAATATAAACTTGAAA+TGG | + | chr3_2:2746066-2746085 | None:intergenic | 15.0% |
| !! | CAAGTTTATATTTGTTTGTT+TGG | - | chr3_2:2746069-2746088 | Msa0391250:CDS | 20.0% |
| !!! | TTTTGTTAATTTTCCAAATC+AGG | - | chr3_2:2746135-2746154 | Msa0391250:CDS | 20.0% |
| !! | CAAGTTTATATTTGTTTGTT+TGG | - | chr3_2:2746069-2746088 | Msa0391250:CDS | 20.0% |
| !!! | TTTTGTTAATTTTCCAAATC+AGG | - | chr3_2:2746135-2746154 | Msa0391250:CDS | 20.0% |
| !!! | GTTTGTTTTTTAAGAAAGCT+AGG | - | chr3_2:2745928-2745947 | Msa0391250:CDS | 25.0% |
| !!! | TTGTTGTTTATCGTTTTGTT+GGG | - | chr3_2:2746012-2746031 | Msa0391250:CDS | 25.0% |
| !! | TATTTGTTTGTTTGGTTCAT+TGG | - | chr3_2:2746077-2746096 | Msa0391250:CDS | 25.0% |
| !!! | GTTTGTTTTTTAAGAAAGCT+AGG | - | chr3_2:2745928-2745947 | Msa0391250:CDS | 25.0% |
| !!! | TTGTTGTTTATCGTTTTGTT+GGG | - | chr3_2:2746012-2746031 | Msa0391250:CDS | 25.0% |
| !! | TATTTGTTTGTTTGGTTCAT+TGG | - | chr3_2:2746077-2746096 | Msa0391250:CDS | 25.0% |
| GTGTATCATGATCATCTTTA+TGG | - | chr3_2:2745819-2745838 | Msa0391250:CDS | 30.0% | |
| AACCTTAACGTTTCAATCAA+CGG | + | chr3_2:2745846-2745865 | None:intergenic | 30.0% | |
| !! | AAGGTTGATGTTGATTAAGA+AGG | - | chr3_2:2745860-2745879 | Msa0391250:CDS | 30.0% |
| TCATATGAAGAGATGGAAAA+AGG | - | chr3_2:2745902-2745921 | Msa0391250:CDS | 30.0% | |
| !!! | GTTGTTGTTTATCGTTTTGT+TGG | - | chr3_2:2746011-2746030 | Msa0391250:CDS | 30.0% |
| AATCTTGTACATACCTGATT+TGG | + | chr3_2:2746151-2746170 | None:intergenic | 30.0% | |
| GTGTATCATGATCATCTTTA+TGG | - | chr3_2:2745819-2745838 | Msa0391250:CDS | 30.0% | |
| AACCTTAACGTTTCAATCAA+CGG | + | chr3_2:2745846-2745865 | None:intergenic | 30.0% | |
| !! | AAGGTTGATGTTGATTAAGA+AGG | - | chr3_2:2745860-2745879 | Msa0391250:CDS | 30.0% |
| TCATATGAAGAGATGGAAAA+AGG | - | chr3_2:2745902-2745921 | Msa0391250:CDS | 30.0% | |
| !!! | GTTGTTGTTTATCGTTTTGT+TGG | - | chr3_2:2746011-2746030 | Msa0391250:CDS | 30.0% |
| AATCTTGTACATACCTGATT+TGG | + | chr3_2:2746151-2746170 | None:intergenic | 30.0% | |
| TCTAGGTTAGGTAGTAGATT+GGG | + | chr3_2:2745366-2745385 | None:intergenic | 35.0% | |
| TTCTAGGTTAGGTAGTAGAT+TGG | + | chr3_2:2745367-2745386 | None:intergenic | 35.0% | |
| !! | GTTTGAAGTAGTTCTAGGTT+AGG | + | chr3_2:2745378-2745397 | None:intergenic | 35.0% |
| ! | AATGGGTTTGAAGTAGTTCT+AGG | + | chr3_2:2745383-2745402 | None:intergenic | 35.0% |
| TGTACAAGATTCGTTGAATC+TGG | - | chr3_2:2746160-2746179 | Msa0391250:CDS | 35.0% | |
| GTACAAGATTCGTTGAATCT+GGG | - | chr3_2:2746161-2746180 | Msa0391250:CDS | 35.0% | |
| TCTAGGTTAGGTAGTAGATT+GGG | + | chr3_2:2745366-2745385 | None:intergenic | 35.0% | |
| TTCTAGGTTAGGTAGTAGAT+TGG | + | chr3_2:2745367-2745386 | None:intergenic | 35.0% | |
| !! | GTTTGAAGTAGTTCTAGGTT+AGG | + | chr3_2:2745378-2745397 | None:intergenic | 35.0% |
| ! | AATGGGTTTGAAGTAGTTCT+AGG | + | chr3_2:2745383-2745402 | None:intergenic | 35.0% |
| TGTACAAGATTCGTTGAATC+TGG | - | chr3_2:2746160-2746179 | Msa0391250:CDS | 35.0% | |
| GTACAAGATTCGTTGAATCT+GGG | - | chr3_2:2746161-2746180 | Msa0391250:CDS | 35.0% | |
| ! | GAATGGGTTTGTTTCTTCGT+CGG | + | chr3_2:2745331-2745350 | None:intergenic | 40.0% |
| ! | AGGTAGTAGATTGGGTTGTA+CGG | + | chr3_2:2745358-2745377 | None:intergenic | 40.0% |
| TTGGATCGAATGGAGGAAAT+GGG | + | chr3_2:2745400-2745419 | None:intergenic | 40.0% | |
| ATTGGATCGAATGGAGGAAA+TGG | + | chr3_2:2745401-2745420 | None:intergenic | 40.0% | |
| TCCCAATCTCAAATTCAACG+CGG | - | chr3_2:2745671-2745690 | Msa0391250:CDS | 40.0% | |
| ! | TCCGCGTTGAATTTGAGATT+GGG | + | chr3_2:2745675-2745694 | None:intergenic | 40.0% |
| ! | TTCCGCGTTGAATTTGAGAT+TGG | + | chr3_2:2745676-2745695 | None:intergenic | 40.0% |
| AAATGTAACACTACCACCGT+TGG | + | chr3_2:2745721-2745740 | None:intergenic | 40.0% | |
| GTGTTACATTTGCATCCCTT+AGG | - | chr3_2:2745730-2745749 | Msa0391250:CDS | 40.0% | |
| TTACATTTGCATCCCTTAGG+TGG | - | chr3_2:2745733-2745752 | Msa0391250:CDS | 40.0% | |
| TACATTTGCATCCCTTAGGT+GGG | - | chr3_2:2745734-2745753 | Msa0391250:CDS | 40.0% | |
| TGTTGTGATAGCTTCAGATG+TGG | - | chr3_2:2745797-2745816 | Msa0391250:CDS | 40.0% | |
| ! | GACCGTTGATTGAAACGTTA+AGG | - | chr3_2:2745841-2745860 | Msa0391250:CDS | 40.0% |
| GAAGGAGATTGTGTTTGTGA+TGG | - | chr3_2:2745878-2745897 | Msa0391250:CDS | 40.0% | |
| TGATGGCTCATATGAAGAGA+TGG | - | chr3_2:2745895-2745914 | Msa0391250:CDS | 40.0% | |
| CATGTTGATGCTCCTTGTAA+TGG | - | chr3_2:2745975-2745994 | Msa0391250:CDS | 40.0% | |
| !! | CCAACTCTAGAACCATTACA+AGG | + | chr3_2:2745990-2746009 | None:intergenic | 40.0% |
| !! | CCTTGTAATGGTTCTAGAGT+TGG | - | chr3_2:2745987-2746006 | Msa0391250:CDS | 40.0% |
| ! | GAATGGGTTTGTTTCTTCGT+CGG | + | chr3_2:2745331-2745350 | None:intergenic | 40.0% |
| ! | AGGTAGTAGATTGGGTTGTA+CGG | + | chr3_2:2745358-2745377 | None:intergenic | 40.0% |
| TTGGATCGAATGGAGGAAAT+GGG | + | chr3_2:2745400-2745419 | None:intergenic | 40.0% | |
| ATTGGATCGAATGGAGGAAA+TGG | + | chr3_2:2745401-2745420 | None:intergenic | 40.0% | |
| TCCCAATCTCAAATTCAACG+CGG | - | chr3_2:2745671-2745690 | Msa0391250:CDS | 40.0% | |
| ! | TCCGCGTTGAATTTGAGATT+GGG | + | chr3_2:2745675-2745694 | None:intergenic | 40.0% |
| ! | TTCCGCGTTGAATTTGAGAT+TGG | + | chr3_2:2745676-2745695 | None:intergenic | 40.0% |
| AAATGTAACACTACCACCGT+TGG | + | chr3_2:2745721-2745740 | None:intergenic | 40.0% | |
| GTGTTACATTTGCATCCCTT+AGG | - | chr3_2:2745730-2745749 | Msa0391250:CDS | 40.0% | |
| TTACATTTGCATCCCTTAGG+TGG | - | chr3_2:2745733-2745752 | Msa0391250:CDS | 40.0% | |
| TACATTTGCATCCCTTAGGT+GGG | - | chr3_2:2745734-2745753 | Msa0391250:CDS | 40.0% | |
| TGTTGTGATAGCTTCAGATG+TGG | - | chr3_2:2745797-2745816 | Msa0391250:CDS | 40.0% | |
| ! | GACCGTTGATTGAAACGTTA+AGG | - | chr3_2:2745841-2745860 | Msa0391250:CDS | 40.0% |
| GAAGGAGATTGTGTTTGTGA+TGG | - | chr3_2:2745878-2745897 | Msa0391250:CDS | 40.0% | |
| TGATGGCTCATATGAAGAGA+TGG | - | chr3_2:2745895-2745914 | Msa0391250:CDS | 40.0% | |
| CATGTTGATGCTCCTTGTAA+TGG | - | chr3_2:2745975-2745994 | Msa0391250:CDS | 40.0% | |
| !! | CCAACTCTAGAACCATTACA+AGG | + | chr3_2:2745990-2746009 | None:intergenic | 40.0% |
| !! | CCTTGTAATGGTTCTAGAGT+TGG | - | chr3_2:2745987-2746006 | Msa0391250:CDS | 40.0% |
| ! | AGTAGATTGGGTTGTACGGT+GGG | + | chr3_2:2745354-2745373 | None:intergenic | 45.0% |
| ! | TAGTAGATTGGGTTGTACGG+TGG | + | chr3_2:2745355-2745374 | None:intergenic | 45.0% |
| CCTCCATTCGATCCAATCAA+CGG | - | chr3_2:2745404-2745423 | Msa0391250:intron | 45.0% | |
| ! | TGACCGTTGATTGGATCGAA+TGG | + | chr3_2:2745410-2745429 | None:intergenic | 45.0% |
| TGAGATTGGGAACGACATGA+GGG | + | chr3_2:2745662-2745681 | None:intergenic | 45.0% | |
| TTGAGATTGGGAACGACATG+AGG | + | chr3_2:2745663-2745682 | None:intergenic | 45.0% | |
| GAAGCTAATGCAGAAGCTGT+GGG | - | chr3_2:2745693-2745712 | Msa0391250:CDS | 45.0% | |
| AAGCTAATGCAGAAGCTGTG+GGG | - | chr3_2:2745694-2745713 | Msa0391250:CDS | 45.0% | |
| ACATTTGCATCCCTTAGGTG+GGG | - | chr3_2:2745735-2745754 | Msa0391250:CDS | 45.0% | |
| ! | AGTAGATTGGGTTGTACGGT+GGG | + | chr3_2:2745354-2745373 | None:intergenic | 45.0% |
| ! | TAGTAGATTGGGTTGTACGG+TGG | + | chr3_2:2745355-2745374 | None:intergenic | 45.0% |
| CCTCCATTCGATCCAATCAA+CGG | - | chr3_2:2745404-2745423 | Msa0391250:intron | 45.0% | |
| ! | TGACCGTTGATTGGATCGAA+TGG | + | chr3_2:2745410-2745429 | None:intergenic | 45.0% |
| TGAGATTGGGAACGACATGA+GGG | + | chr3_2:2745662-2745681 | None:intergenic | 45.0% | |
| TTGAGATTGGGAACGACATG+AGG | + | chr3_2:2745663-2745682 | None:intergenic | 45.0% | |
| GAAGCTAATGCAGAAGCTGT+GGG | - | chr3_2:2745693-2745712 | Msa0391250:CDS | 45.0% | |
| AAGCTAATGCAGAAGCTGTG+GGG | - | chr3_2:2745694-2745713 | Msa0391250:CDS | 45.0% | |
| ACATTTGCATCCCTTAGGTG+GGG | - | chr3_2:2745735-2745754 | Msa0391250:CDS | 45.0% | |
| ! | GTAGATTGGGTTGTACGGTG+GGG | + | chr3_2:2745353-2745372 | None:intergenic | 50.0% |
| ! | CCGTTGATTGGATCGAATGG+AGG | + | chr3_2:2745407-2745426 | None:intergenic | 50.0% |
| AGCGAATGGTGACCGTTGAT+TGG | + | chr3_2:2745419-2745438 | None:intergenic | 50.0% | |
| TACGTTTGTTCCGAGTGTGG+CGG | + | chr3_2:2745625-2745644 | None:intergenic | 50.0% | |
| GGTTACGTTTGTTCCGAGTG+TGG | + | chr3_2:2745628-2745647 | None:intergenic | 50.0% | |
| GGAAGCTAATGCAGAAGCTG+TGG | - | chr3_2:2745692-2745711 | Msa0391250:CDS | 50.0% | |
| GCTGCTGACGTGGAAATGAT+TGG | - | chr3_2:2745762-2745781 | Msa0391250:CDS | 50.0% | |
| GCTGACGTGGAAATGATTGG+AGG | - | chr3_2:2745765-2745784 | Msa0391250:CDS | 50.0% | |
| ! | GTAGATTGGGTTGTACGGTG+GGG | + | chr3_2:2745353-2745372 | None:intergenic | 50.0% |
| ! | CCGTTGATTGGATCGAATGG+AGG | + | chr3_2:2745407-2745426 | None:intergenic | 50.0% |
| AGCGAATGGTGACCGTTGAT+TGG | + | chr3_2:2745419-2745438 | None:intergenic | 50.0% | |
| TACGTTTGTTCCGAGTGTGG+CGG | + | chr3_2:2745625-2745644 | None:intergenic | 50.0% | |
| GGTTACGTTTGTTCCGAGTG+TGG | + | chr3_2:2745628-2745647 | None:intergenic | 50.0% | |
| GGAAGCTAATGCAGAAGCTG+TGG | - | chr3_2:2745692-2745711 | Msa0391250:CDS | 50.0% | |
| GCTGCTGACGTGGAAATGAT+TGG | - | chr3_2:2745762-2745781 | Msa0391250:CDS | 50.0% | |
| GCTGACGTGGAAATGATTGG+AGG | - | chr3_2:2745765-2745784 | Msa0391250:CDS | 50.0% | |
| TGGGTTGTACGGTGGGGAAT+GGG | + | chr3_2:2745347-2745366 | None:intergenic | 55.0% | |
| ! | TTGGGTTGTACGGTGGGGAA+TGG | + | chr3_2:2745348-2745367 | None:intergenic | 55.0% |
| TTGGGATGGGAGTGAGCGAA+TGG | + | chr3_2:2745433-2745452 | None:intergenic | 55.0% | |
| ATTCGCTCACTCCCATCCCA+AGG | - | chr3_2:2745432-2745451 | Msa0391250:intron | 55.0% | |
| GGAAGGAGAGACCTTGGGAT+GGG | + | chr3_2:2745446-2745465 | None:intergenic | 55.0% | |
| TGGAAGGAGAGACCTTGGGA+TGG | + | chr3_2:2745447-2745466 | None:intergenic | 55.0% | |
| GAGCTGGAAGGAGAGACCTT+GGG | + | chr3_2:2745451-2745470 | None:intergenic | 55.0% | |
| AGAGCTGGAAGGAGAGACCT+TGG | + | chr3_2:2745452-2745471 | None:intergenic | 55.0% | |
| AAGGTCTCTCCTTCCAGCTC+TGG | - | chr3_2:2745451-2745470 | Msa0391250:intron | 55.0% | |
| ATGAGAGGACGGTTGAGAGG+GGG | + | chr3_2:2745536-2745555 | None:intergenic | 55.0% | |
| GATGAGAGGACGGTTGAGAG+GGG | + | chr3_2:2745537-2745556 | None:intergenic | 55.0% | |
| GGATGAGAGGACGGTTGAGA+GGG | + | chr3_2:2745538-2745557 | None:intergenic | 55.0% | |
| AGTGTGGAGGGATGAGAGGA+CGG | + | chr3_2:2745547-2745566 | None:intergenic | 55.0% | |
| GACATGAGGGAGGTCGGTTA+GGG | + | chr3_2:2745649-2745668 | None:intergenic | 55.0% | |
| GATTGGGAACGACATGAGGG+AGG | + | chr3_2:2745659-2745678 | None:intergenic | 55.0% | |
| AGCAGCATGACCCCACCTAA+GGG | + | chr3_2:2745748-2745767 | None:intergenic | 55.0% | |
| TGGGTTGTACGGTGGGGAAT+GGG | + | chr3_2:2745347-2745366 | None:intergenic | 55.0% | |
| ! | TTGGGTTGTACGGTGGGGAA+TGG | + | chr3_2:2745348-2745367 | None:intergenic | 55.0% |
| TTGGGATGGGAGTGAGCGAA+TGG | + | chr3_2:2745433-2745452 | None:intergenic | 55.0% | |
| ATTCGCTCACTCCCATCCCA+AGG | - | chr3_2:2745432-2745451 | Msa0391250:intron | 55.0% | |
| GGAAGGAGAGACCTTGGGAT+GGG | + | chr3_2:2745446-2745465 | None:intergenic | 55.0% | |
| TGGAAGGAGAGACCTTGGGA+TGG | + | chr3_2:2745447-2745466 | None:intergenic | 55.0% | |
| GAGCTGGAAGGAGAGACCTT+GGG | + | chr3_2:2745451-2745470 | None:intergenic | 55.0% | |
| AGAGCTGGAAGGAGAGACCT+TGG | + | chr3_2:2745452-2745471 | None:intergenic | 55.0% | |
| AAGGTCTCTCCTTCCAGCTC+TGG | - | chr3_2:2745451-2745470 | Msa0391250:intron | 55.0% | |
| ATGAGAGGACGGTTGAGAGG+GGG | + | chr3_2:2745536-2745555 | None:intergenic | 55.0% | |
| GATGAGAGGACGGTTGAGAG+GGG | + | chr3_2:2745537-2745556 | None:intergenic | 55.0% | |
| GGATGAGAGGACGGTTGAGA+GGG | + | chr3_2:2745538-2745557 | None:intergenic | 55.0% | |
| AGTGTGGAGGGATGAGAGGA+CGG | + | chr3_2:2745547-2745566 | None:intergenic | 55.0% | |
| GACATGAGGGAGGTCGGTTA+GGG | + | chr3_2:2745649-2745668 | None:intergenic | 55.0% | |
| GATTGGGAACGACATGAGGG+AGG | + | chr3_2:2745659-2745678 | None:intergenic | 55.0% | |
| AGCAGCATGACCCCACCTAA+GGG | + | chr3_2:2745748-2745767 | None:intergenic | 55.0% | |
| GAGAGTGACGAGAGAGGTGG+CGG | + | chr3_2:2745481-2745500 | None:intergenic | 60.0% | |
| GAGGAGAGTGACGAGAGAGG+TGG | + | chr3_2:2745484-2745503 | None:intergenic | 60.0% | |
| GTCGAGGAGAGTGACGAGAG+AGG | + | chr3_2:2745487-2745506 | None:intergenic | 60.0% | |
| GGGATGAGAGGACGGTTGAG+AGG | + | chr3_2:2745539-2745558 | None:intergenic | 60.0% | |
| GTGGAGTGTGGAGGGATGAG+AGG | + | chr3_2:2745551-2745570 | None:intergenic | 60.0% | |
| ! | GATGCGTGGTGGAGTGTGGA+GGG | + | chr3_2:2745559-2745578 | None:intergenic | 60.0% |
| CCACCACGCATCCTCGAACT+CGG | - | chr3_2:2745567-2745586 | Msa0391250:CDS | 60.0% | |
| TGCGACTATGCCGACGATGC+CGG | + | chr3_2:2745601-2745620 | None:intergenic | 60.0% | |
| ATAGTCGCAGCCGCCACACT+CGG | - | chr3_2:2745612-2745631 | Msa0391250:CDS | 60.0% | |
| CGACATGAGGGAGGTCGGTT+AGG | + | chr3_2:2745650-2745669 | None:intergenic | 60.0% | |
| GGGAACGACATGAGGGAGGT+CGG | + | chr3_2:2745655-2745674 | None:intergenic | 60.0% | |
| GCAGAAGCTGTGGGGTCCAA+CGG | - | chr3_2:2745702-2745721 | Msa0391250:CDS | 60.0% | |
| CAGCAGCATGACCCCACCTA+AGG | + | chr3_2:2745749-2745768 | None:intergenic | 60.0% | |
| GAGAGTGACGAGAGAGGTGG+CGG | + | chr3_2:2745481-2745500 | None:intergenic | 60.0% | |
| GAGGAGAGTGACGAGAGAGG+TGG | + | chr3_2:2745484-2745503 | None:intergenic | 60.0% | |
| GTCGAGGAGAGTGACGAGAG+AGG | + | chr3_2:2745487-2745506 | None:intergenic | 60.0% | |
| GGGATGAGAGGACGGTTGAG+AGG | + | chr3_2:2745539-2745558 | None:intergenic | 60.0% | |
| GTGGAGTGTGGAGGGATGAG+AGG | + | chr3_2:2745551-2745570 | None:intergenic | 60.0% | |
| ! | GATGCGTGGTGGAGTGTGGA+GGG | + | chr3_2:2745559-2745578 | None:intergenic | 60.0% |
| CCACCACGCATCCTCGAACT+CGG | - | chr3_2:2745567-2745586 | Msa0391250:CDS | 60.0% | |
| TGCGACTATGCCGACGATGC+CGG | + | chr3_2:2745601-2745620 | None:intergenic | 60.0% | |
| ATAGTCGCAGCCGCCACACT+CGG | - | chr3_2:2745612-2745631 | Msa0391250:CDS | 60.0% | |
| CGACATGAGGGAGGTCGGTT+AGG | + | chr3_2:2745650-2745669 | None:intergenic | 60.0% | |
| GGGAACGACATGAGGGAGGT+CGG | + | chr3_2:2745655-2745674 | None:intergenic | 60.0% | |
| GCAGAAGCTGTGGGGTCCAA+CGG | - | chr3_2:2745702-2745721 | Msa0391250:CDS | 60.0% | |
| CAGCAGCATGACCCCACCTA+AGG | + | chr3_2:2745749-2745768 | None:intergenic | 60.0% | |
| ! | AGTGACGAGAGAGGTGGCGG+CGG | + | chr3_2:2745478-2745497 | None:intergenic | 65.0% |
| GGTTGAGGCGGTGGTTGTCG+AGG | + | chr3_2:2745503-2745522 | None:intergenic | 65.0% | |
| ! | TTGAGAGGGGGCTGGTGGTG+GGG | + | chr3_2:2745524-2745543 | None:intergenic | 65.0% |
| ! | GTTGAGAGGGGGCTGGTGGT+GGG | + | chr3_2:2745525-2745544 | None:intergenic | 65.0% |
| ! | GGATGCGTGGTGGAGTGTGG+AGG | + | chr3_2:2745560-2745579 | None:intergenic | 65.0% |
| ! | CGAGGATGCGTGGTGGAGTG+TGG | + | chr3_2:2745563-2745582 | None:intergenic | 65.0% |
| CCGAGTTCGAGGATGCGTGG+TGG | + | chr3_2:2745570-2745589 | None:intergenic | 65.0% | |
| GAGCCGAGTTCGAGGATGCG+TGG | + | chr3_2:2745573-2745592 | None:intergenic | 65.0% | |
| CGCATCCTCGAACTCGGCTC+CGG | - | chr3_2:2745573-2745592 | Msa0391250:CDS | 65.0% | |
| TATGCCGACGATGCCGGTGC+CGG | + | chr3_2:2745595-2745614 | None:intergenic | 65.0% | |
| GAAGCTGTGGGGTCCAACGG+TGG | - | chr3_2:2745705-2745724 | Msa0391250:CDS | 65.0% | |
| GTGGGGTCATGCTGCTGACG+TGG | - | chr3_2:2745752-2745771 | Msa0391250:CDS | 65.0% | |
| ! | AGTGACGAGAGAGGTGGCGG+CGG | + | chr3_2:2745478-2745497 | None:intergenic | 65.0% |
| GGTTGAGGCGGTGGTTGTCG+AGG | + | chr3_2:2745503-2745522 | None:intergenic | 65.0% | |
| ! | TTGAGAGGGGGCTGGTGGTG+GGG | + | chr3_2:2745524-2745543 | None:intergenic | 65.0% |
| ! | GTTGAGAGGGGGCTGGTGGT+GGG | + | chr3_2:2745525-2745544 | None:intergenic | 65.0% |
| ! | GGATGCGTGGTGGAGTGTGG+AGG | + | chr3_2:2745560-2745579 | None:intergenic | 65.0% |
| ! | CGAGGATGCGTGGTGGAGTG+TGG | + | chr3_2:2745563-2745582 | None:intergenic | 65.0% |
| CCGAGTTCGAGGATGCGTGG+TGG | + | chr3_2:2745570-2745589 | None:intergenic | 65.0% | |
| GAGCCGAGTTCGAGGATGCG+TGG | + | chr3_2:2745573-2745592 | None:intergenic | 65.0% | |
| CGCATCCTCGAACTCGGCTC+CGG | - | chr3_2:2745573-2745592 | Msa0391250:CDS | 65.0% | |
| TATGCCGACGATGCCGGTGC+CGG | + | chr3_2:2745595-2745614 | None:intergenic | 65.0% | |
| GAAGCTGTGGGGTCCAACGG+TGG | - | chr3_2:2745705-2745724 | Msa0391250:CDS | 65.0% | |
| GTGGGGTCATGCTGCTGACG+TGG | - | chr3_2:2745752-2745771 | Msa0391250:CDS | 65.0% | |
| ! | GTGACGAGAGAGGTGGCGGC+GGG | + | chr3_2:2745477-2745496 | None:intergenic | 70.0% |
| !! | TGGTGGTGGGGTTGAGGCGG+TGG | + | chr3_2:2745512-2745531 | None:intergenic | 70.0% |
| !! | GGCTGGTGGTGGGGTTGAGG+CGG | + | chr3_2:2745515-2745534 | None:intergenic | 70.0% |
| ! | GGTTGAGAGGGGGCTGGTGG+TGG | + | chr3_2:2745526-2745545 | None:intergenic | 70.0% |
| GACGGTTGAGAGGGGGCTGG+TGG | + | chr3_2:2745529-2745548 | None:intergenic | 70.0% | |
| GAGGACGGTTGAGAGGGGGC+TGG | + | chr3_2:2745532-2745551 | None:intergenic | 70.0% | |
| CTCGAACTCGGCTCCGGCAC+CGG | - | chr3_2:2745579-2745598 | Msa0391250:CDS | 70.0% | |
| ! | GTGACGAGAGAGGTGGCGGC+GGG | + | chr3_2:2745477-2745496 | None:intergenic | 70.0% |
| !! | TGGTGGTGGGGTTGAGGCGG+TGG | + | chr3_2:2745512-2745531 | None:intergenic | 70.0% |
| !! | GGCTGGTGGTGGGGTTGAGG+CGG | + | chr3_2:2745515-2745534 | None:intergenic | 70.0% |
| ! | GGTTGAGAGGGGGCTGGTGG+TGG | + | chr3_2:2745526-2745545 | None:intergenic | 70.0% |
| GACGGTTGAGAGGGGGCTGG+TGG | + | chr3_2:2745529-2745548 | None:intergenic | 70.0% | |
| GAGGACGGTTGAGAGGGGGC+TGG | + | chr3_2:2745532-2745551 | None:intergenic | 70.0% | |
| CTCGAACTCGGCTCCGGCAC+CGG | - | chr3_2:2745579-2745598 | Msa0391250:CDS | 70.0% | |
| !! | GGGGGCTGGTGGTGGGGTTG+AGG | + | chr3_2:2745518-2745537 | None:intergenic | 75.0% |
| ! | CGGTGCCGGAGCCGAGTTCG+AGG | + | chr3_2:2745581-2745600 | None:intergenic | 75.0% |
| !! | GGCTCCGGCACCGGCATCGT+CGG | - | chr3_2:2745588-2745607 | Msa0391250:CDS | 75.0% |
| !! | GGGGGCTGGTGGTGGGGTTG+AGG | + | chr3_2:2745518-2745537 | None:intergenic | 75.0% |
| ! | CGGTGCCGGAGCCGAGTTCG+AGG | + | chr3_2:2745581-2745600 | None:intergenic | 75.0% |
| !! | GGCTCCGGCACCGGCATCGT+CGG | - | chr3_2:2745588-2745607 | Msa0391250:CDS | 75.0% |
| ! | GGCGGCGGGCCAGAGCTGGA+AGG | + | chr3_2:2745463-2745482 | None:intergenic | 80.0% |
| !! | AGGTGGCGGCGGGCCAGAGC+TGG | + | chr3_2:2745467-2745486 | None:intergenic | 80.0% |
| ! | GGCGGCGGGCCAGAGCTGGA+AGG | + | chr3_2:2745463-2745482 | None:intergenic | 80.0% |
| !! | AGGTGGCGGCGGGCCAGAGC+TGG | + | chr3_2:2745467-2745486 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 2745318 | 2746195 | 2745318 | ID=Msa0391250;Name=Msa0391250 |
| chr3_2 | mRNA | 2745318 | 2746195 | 2745318 | ID=Msa0391250-mRNA-1;Parent=Msa0391250;Name=Msa0391250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|0.5|1|1|2|0|254 |
| chr3_2 | exon | 2745470 | 2746195 | 2745470 | ID=Msa0391250-mRNA-1:exon:831;Parent=Msa0391250-mRNA-1 |
| chr3_2 | exon | 2745318 | 2745356 | 2745318 | ID=Msa0391250-mRNA-1:exon:830;Parent=Msa0391250-mRNA-1 |
| chr3_2 | CDS | 2745470 | 2746195 | 2745470 | ID=Msa0391250-mRNA-1:cds;Parent=Msa0391250-mRNA-1 |
| chr3_2 | CDS | 2745318 | 2745356 | 2745318 | ID=Msa0391250-mRNA-1:cds;Parent=Msa0391250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
