AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1288970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288970 MtrunA17_Chr8g0362571 92.896 915 39 3 1 891 1 913 0.0 1712
Msa1288970 MtrunA17_Chr7g0218861 56.500 400 143 6 516 886 562 959 1.14e-155 481
Msa1288970 MtrunA17_Chr1g0157251 44.192 396 186 7 520 887 43 431 5.71e-113 353
Msa1288970 MtrunA17_Chr1g0153391 44.776 402 180 8 523 887 25 421 1.03e-108 341
Msa1288970 MtrunA17_Chr1g0153421 44.690 226 113 6 670 889 2 221 1.69e-52 182
Msa1288970 MtrunA17_Chr1g0153411 32.571 175 84 4 523 664 25 198 1.13e-23 99.8
Msa1288970 MtrunA17_Chr8g0343341 35.211 71 46 0 625 695 46 116 5.04e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288970 AT1G69830.1 64.573 844 250 9 69 887 66 885 0.0 1116
Msa1288970 AT1G76130.2 44.949 396 183 7 520 887 24 412 1.58e-112 351
Msa1288970 AT1G76130.1 44.949 396 183 7 520 887 24 412 1.58e-112 351
Msa1288970 AT4G25000.1 41.604 399 195 8 523 887 27 421 8.95e-93 300

Find 234 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCATTGGGGAGTTTC+TGG 0.091608 8_3:-42441784 Msa1288970:CDS
TCAATTACTTCAAAAGTTTA+TGG 0.108808 8_3:+42434005 None:intergenic
CCATAGGCTTATTGTATAAT+TGG 0.117740 8_3:-42434268 Msa1288970:three_prime_UTR
GTAGCAAAAGTTTCAAATTT+TGG 0.135634 8_3:+42442625 None:intergenic
AAACTATTGTCTACCTTTAT+AGG 0.158801 8_3:+42441381 None:intergenic
CTCTTGGCTTTACTGTTATT+TGG 0.163991 8_3:-42439010 Msa1288970:intron
ACGGAGGATGCTAATTTAAT+TGG 0.168206 8_3:-42440970 Msa1288970:CDS
TTGACTTTGTCAGAGGATTT+TGG 0.181955 8_3:-42436743 Msa1288970:CDS
AATGGTTTCTTGAGCTTCTT+TGG 0.188878 8_3:+42439280 None:intergenic
AATGGTATTTGGAACATATT+TGG 0.190723 8_3:-42438360 Msa1288970:CDS
TTGTATGCCAAGGGTTTAAT+TGG 0.200911 8_3:-42439094 Msa1288970:CDS
GAAATAAGGCATTTGGTTAC+TGG 0.216838 8_3:-42439335 Msa1288970:CDS
GAGAGAGAGTGTGAAGAATT+TGG 0.220547 8_3:+42442721 None:intergenic
CATCGGTTGCTTCCGAATTC+AGG 0.254238 8_3:+42440318 None:intergenic
CTTCCCTTTCCACTTCCTTT+TGG 0.255177 8_3:+42439581 None:intergenic
ACTATGGTTCTTCTTGTTCT+TGG 0.272636 8_3:-42442678 Msa1288970:CDS
ACAGTAACTTCCTTGGTTAA+AGG 0.278492 8_3:+42440215 None:intergenic
ATAAACGTCCCTTTCTGATT+TGG 0.282607 8_3:+42434491 None:intergenic
TATTTCATTGATTATTTCAT+TGG 0.290467 8_3:+42439352 None:intergenic
GGTGCAATCTACCAGGAAAT+TGG 0.294065 8_3:-42441807 Msa1288970:CDS
ATGAAATAATCAATGAAATA+AGG 0.296161 8_3:-42439349 Msa1288970:CDS
TGTGGAATCCGAGGTTGTTT+TGG 0.299314 8_3:-42439177 Msa1288970:CDS
AAGAACACTGACGGAGTTCC+TGG 0.299428 8_3:+42435394 None:intergenic
ACTTCCGGTAGCTCAGTTAT+TGG 0.310168 8_3:-42439446 Msa1288970:CDS
ATTTGGCTTGAAACGGTTAA+TGG 0.313857 8_3:+42442738 None:intergenic
TTAAGATAAATGAAAATTCA+TGG 0.318297 8_3:-42439508 Msa1288970:CDS
CAGGAAATTGGATTCTTCAT+TGG 0.318347 8_3:-42441795 Msa1288970:CDS
ACTACCAATATTATTAACTA+TGG 0.319695 8_3:-42442694 Msa1288970:CDS
ACGGAAGAGACTACAAGATT+TGG 0.334541 8_3:-42434377 Msa1288970:CDS
AGGAAATTGGATTCTTCATT+GGG 0.341748 8_3:-42441794 Msa1288970:CDS
TATTTGGAGGTCGTCTCAAC+TGG 0.344947 8_3:-42438344 Msa1288970:CDS
TACGTCCCTCTCTCAACTTC+CGG 0.350003 8_3:-42439461 Msa1288970:CDS
AGTTTGGCGAACTCAATTAA+AGG 0.353674 8_3:-42440012 Msa1288970:intron
GTGAAAGAATTTCATAAAGT+TGG 0.354126 8_3:-42438441 Msa1288970:CDS
ATCAGAATAAGAATGGTATT+TGG 0.356883 8_3:-42438371 Msa1288970:CDS
AGAACCATAGTTAATAATAT+TGG 0.357836 8_3:+42442690 None:intergenic
AGAGAAGAAATTGGATATGA+TGG 0.358210 8_3:-42436774 Msa1288970:CDS
AAGTTCAGCACAAATCTCTT+TGG 0.358310 8_3:-42439561 Msa1288970:CDS
GTTTCTGGTGTGGATGATAT+TGG 0.363105 8_3:-42441769 Msa1288970:CDS
AATCAATGAAATAAGGCATT+TGG 0.365401 8_3:-42439342 Msa1288970:CDS
AATTGGGAGTCTAATAAATC+TGG 0.367354 8_3:-42439077 Msa1288970:CDS
AAGAATGGTTATGCTGGTTA+AGG 0.367519 8_3:-42437710 Msa1288970:intron
TCCTGGATCTATTCCTATAA+AGG 0.369975 8_3:-42441394 Msa1288970:intron
TACCAGTTCAATTCTGTTGA+TGG 0.381799 8_3:+42442540 None:intergenic
AATTTAATTGGACCTAAAAC+AGG 0.381891 8_3:-42440958 Msa1288970:CDS
AAGAATTCAGAGCTTATAGT+TGG 0.386894 8_3:-42441829 Msa1288970:CDS
CTAAGAACTGATATACTGTT+TGG 0.387228 8_3:-42433973 Msa1288970:three_prime_UTR
ATCTAAAGTTATCCTGAATT+CGG 0.389157 8_3:-42440330 Msa1288970:CDS
AGTTTCAAATATTGATTTGA+AGG 0.392152 8_3:+42434125 None:intergenic
TCTCTATTCGGAAACGGAAC+GGG 0.392449 8_3:-42435327 Msa1288970:CDS
TCCTCACTCATAGGGGACTT+AGG 0.397654 8_3:-42440359 Msa1288970:intron
ACAGTATATCAGTTCTTAGA+TGG 0.398080 8_3:+42433977 None:intergenic
AGTTCAGCACAAATCTCTTT+GGG 0.405517 8_3:-42439560 Msa1288970:CDS
CAGTTATACATATGGTGAAA+TGG 0.406347 8_3:-42436649 Msa1288970:CDS
TAGAGATGATTCAAGAAGTT+GGG 0.407862 8_3:-42440084 Msa1288970:CDS
CGGAAGAGACTACAAGATTT+GGG 0.413097 8_3:-42434376 Msa1288970:CDS
GTAGAGATGATTCAAGAAGT+TGG 0.415469 8_3:-42440085 Msa1288970:CDS
CCTCACTCATAGGGGACTTA+GGG 0.418657 8_3:-42440358 Msa1288970:intron
TCTTTATATGCTACAGTTTG+TGG 0.420943 8_3:+42440038 None:intergenic
TAGCGGCACTTCTCTCTATT+CGG 0.421298 8_3:-42435339 Msa1288970:CDS
TGGAGGCAACTCAGGTGATT+CGG 0.422854 8_3:+42439151 None:intergenic
GGTTCATTTCAGCTTAAGTC+TGG 0.423115 8_3:-42434166 Msa1288970:three_prime_UTR
TGTAACATCTTCCTTGCAAA+AGG 0.423205 8_3:-42442857 Msa1288970:five_prime_UTR
TTGGCGCTTGTCGGATCAGC+AGG 0.425045 8_3:-42435929 Msa1288970:CDS
TAGCATATAAAGACACAGTT+TGG 0.430766 8_3:-42440028 Msa1288970:CDS
TCTTTCAATTTCTTGAAGAA+TGG 0.430927 8_3:+42439262 None:intergenic
TACTCTCCCACACAAAAGTA+TGG 0.432146 8_3:+42436684 None:intergenic
ATAATGTCGGGAACAGGCAC+AGG 0.439096 8_3:-42439125 Msa1288970:CDS
TCCTGTGAATGATCAATGTT+TGG 0.444598 8_3:+42437753 None:intergenic
CAATGAAGAATCCAATTTCC+TGG 0.444655 8_3:+42441796 None:intergenic
TCATAAAGAGTATCTCCTTC+CGG 0.451981 8_3:+42441233 None:intergenic
TGTATGCCAAGGGTTTAATT+GGG 0.452945 8_3:-42439093 Msa1288970:CDS
TCGATGCAGGACGAGGAAAC+TGG 0.453145 8_3:-42441048 Msa1288970:intron
CTCTCTATTCGGAAACGGAA+CGG 0.458500 8_3:-42435328 Msa1288970:CDS
TCCCACACAAAAGTATGGTT+TGG 0.459099 8_3:+42436689 None:intergenic
TAGACTCCCAATTAAACCCT+TGG 0.463111 8_3:+42439087 None:intergenic
TCCCATCAACAGAATTGAAC+TGG 0.465937 8_3:-42442542 Msa1288970:intron
TGAGAAACGATATTAAAGAA+TGG 0.466017 8_3:-42437725 Msa1288970:CDS
CACAGAGTGAAGAATCCCTT+TGG 0.466936 8_3:+42436542 None:intergenic
GAGATACTCTTTATGAAGTC+AGG 0.472117 8_3:-42441226 Msa1288970:CDS
GTGAAGAATTTGGCTTGAAA+CGG 0.474351 8_3:+42442731 None:intergenic
TCCTCTGGTAAACTATCTTA+CGG 0.478140 8_3:-42440989 Msa1288970:CDS
GTTATTGACAGTAACTTCCT+TGG 0.481501 8_3:+42440208 None:intergenic
GATTCCCTCAGTTATACATA+TGG 0.481642 8_3:-42436657 Msa1288970:CDS
AAGAGACTTCAAAGTTCCTC+TGG 0.481998 8_3:-42441004 Msa1288970:CDS
AAGAAATTGGATATGATGGA+TGG 0.482079 8_3:-42436770 Msa1288970:CDS
CCCCGTGATATGATACCTCC+TGG 0.484490 8_3:-42441411 Msa1288970:CDS
CTTTCTTCTATACAGGGGAG+GGG 0.484650 8_3:-42437810 Msa1288970:intron
AATCGCTGAAATCTCATCGC+TGG 0.484867 8_3:+42441190 None:intergenic
TCTTCAAGAAATTGAAAGAC+TGG 0.486638 8_3:-42439258 Msa1288970:CDS
CAGAAGATTGAATCTGTTGA+AGG 0.487387 8_3:+42442590 None:intergenic
ACCAGTTCAATTCTGTTGAT+GGG 0.490268 8_3:+42442541 None:intergenic
GAGAGTTTGAAATTGAAGAG+TGG 0.492621 8_3:+42442781 None:intergenic
ATGTGAGTATTGGCGCTTGT+CGG 0.492772 8_3:-42435938 Msa1288970:CDS
GCTAAAGAACTAGCATCTCT+TGG 0.494064 8_3:-42439026 Msa1288970:CDS
CTCTACAAACTCCCCAATGA+AGG 0.495764 8_3:+42440102 None:intergenic
AATGGTAGCTAATCTGTGGT+AGG 0.496270 8_3:+42442756 None:intergenic
ATAGTTAATAATATTGGTAG+TGG 0.496843 8_3:+42442696 None:intergenic
AGACTACAAGATTTGGGAGC+TGG 0.499681 8_3:-42434370 Msa1288970:CDS
CACTTCTCTCTATTCGGAAA+CGG 0.499973 8_3:-42435333 Msa1288970:CDS
TAAAATTACCAAATCAGAAA+GGG 0.504939 8_3:-42434499 Msa1288970:CDS
CTCGGAGAAAGCTGGAACTG+AGG 0.506669 8_3:+42439208 None:intergenic
GTGTTTATAAGATTAGATCA+AGG 0.510606 8_3:-42441862 Msa1288970:CDS
CGATCTGTTATGTAGCCAAA+AGG 0.511112 8_3:-42439596 Msa1288970:intron
CATTTGATGTTACAACCAAA+GGG 0.513448 8_3:-42436557 Msa1288970:CDS
ATGATAGGTGGTCGTGGTGA+TGG 0.513841 8_3:+42442832 None:intergenic
ATAGCTTCCTCGGAGAAAGC+TGG 0.514012 8_3:+42439200 None:intergenic
ATATCTCATTGCCTTACCAT+AGG 0.516197 8_3:-42434284 Msa1288970:three_prime_UTR
TCCAGGAGGTATCATATCAC+GGG 0.519553 8_3:+42441410 None:intergenic
GCATTTGATGTTACAACCAA+AGG 0.521112 8_3:-42436558 Msa1288970:CDS
TAGCCAAAAGGAAGTGGAAA+GGG 0.521578 8_3:-42439584 Msa1288970:CDS
ACTCTATCAGTGTCTCCGTT+AGG 0.521785 8_3:-42440187 Msa1288970:CDS
CATTGGAAAGATGTGAGTAT+TGG 0.524075 8_3:-42435948 Msa1288970:CDS
CCAATTATACAATAAGCCTA+TGG 0.524563 8_3:+42434268 None:intergenic
GATGATGATGATTTCTTCAA+AGG 0.524610 8_3:+42441260 None:intergenic
ATCAAGATGCACACAGGCAG+AGG 0.525851 8_3:-42436620 Msa1288970:CDS
AGCTAATACTAAGAAGCAAA+AGG 0.526972 8_3:-42442899 Msa1288970:five_prime_UTR
GTTATGTAGCCAAAAGGAAG+TGG 0.527882 8_3:-42439590 Msa1288970:intron
TAATCTGCAGGTGGAGGGAA+AGG 0.530804 8_3:-42441884 Msa1288970:intron
ACAGGCAGAGGATCGTTGAC+TGG 0.534572 8_3:-42436608 Msa1288970:CDS
GGTATTTGGAACATATTTGG+AGG 0.534787 8_3:-42438357 Msa1288970:CDS
CACATCCTTCAGTTCATCAA+TGG 0.535296 8_3:+42438464 None:intergenic
ATATTAAAGAATGGTTATGC+TGG 0.535991 8_3:-42437716 Msa1288970:CDS
GCTATCTTGAACTTTGTCAT+CGG 0.536017 8_3:+42440301 None:intergenic
TTATATGCTACAGTTTGTGG+TGG 0.536406 8_3:+42440041 None:intergenic
GGATTCCACAATAGCTTCCT+CGG 0.538172 8_3:+42439190 None:intergenic
AGAATTCAGAGCTTATAGTT+GGG 0.539938 8_3:-42441828 Msa1288970:CDS
GTTTGTGGTGGATGAGGAGC+AGG 0.542061 8_3:+42440053 None:intergenic
TTAAAATTACCAAATCAGAA+AGG 0.543716 8_3:-42434500 Msa1288970:CDS
TTTCTCCGAGGAAGCTATTG+TGG 0.544731 8_3:-42439195 Msa1288970:CDS
AAAGTTGGAATCAAAGTGCT+AGG 0.546749 8_3:-42438426 Msa1288970:CDS
AGTCTAATAAATCTGGAAGA+TGG 0.547837 8_3:-42439070 Msa1288970:CDS
AGTGCTGCCGGTGGTACTGC+AGG 0.548738 8_3:-42436582 Msa1288970:CDS
ATCGCTGAAATCTCATCGCT+GGG 0.549931 8_3:+42441191 None:intergenic
AATATATGAATTGTAAACAT+AGG 0.550004 8_3:+42434086 None:intergenic
CTTATTGTATAATTGGATGA+TGG 0.551028 8_3:-42434261 Msa1288970:three_prime_UTR
GGCCACCATCCCATAACACC+GGG 0.551856 8_3:+42435898 None:intergenic
TATAATTGGATGATGGTGTC+AGG 0.553125 8_3:-42434254 Msa1288970:three_prime_UTR
CACAAACAAACCTGAAAATG+TGG 0.557470 8_3:+42438294 None:intergenic
TCCAAACATTGATCATTCAC+AGG 0.559398 8_3:-42437754 Msa1288970:CDS
TAAATCTGGAAGATGGTACA+TGG 0.559670 8_3:-42439063 Msa1288970:CDS
AAATTCATGGTTAAATAACA+AGG 0.562174 8_3:-42439495 Msa1288970:CDS
GGGTATGAAATTGTATGCCA+AGG 0.563869 8_3:-42439104 Msa1288970:CDS
TGTTTATAAGATTAGATCAA+GGG 0.564271 8_3:-42441861 Msa1288970:CDS
GCTACAGTTTGTGGTGGATG+AGG 0.564756 8_3:+42440047 None:intergenic
ATCCAGGAGGTATCATATCA+CGG 0.565082 8_3:+42441409 None:intergenic
CAGAAGTATCATTATAGAGA+AGG 0.565181 8_3:-42434197 Msa1288970:three_prime_UTR
ACCTTTATAGGAATAGATCC+AGG 0.566563 8_3:+42441393 None:intergenic
GTTGCCAATAACTGAGCTAC+CGG 0.569553 8_3:+42439442 None:intergenic
TGTAGAACTGCCTTTAACCA+AGG 0.570430 8_3:-42440225 Msa1288970:CDS
ACTCATAGGGGACTTAGGGC+AGG 0.570493 8_3:-42440354 Msa1288970:intron
GCTGAGCATCAGAATAAGAA+TGG 0.572411 8_3:-42438378 Msa1288970:CDS
ATAGTTGGGTGCAATCTACC+AGG 0.573646 8_3:-42441814 Msa1288970:CDS
ACTCTTTATGAAGTCAGGAT+CGG 0.574850 8_3:-42441221 Msa1288970:CDS
TATACAATAAGCCTATGGTA+AGG 0.575566 8_3:+42434273 None:intergenic
AGAACACTGACGGAGTTCCT+GGG 0.576561 8_3:+42435395 None:intergenic
AGAACTGATATACTGTTTGG+AGG 0.576961 8_3:-42433970 None:intergenic
AAAGATACTGTAGGCTTCAG+CGG 0.578224 8_3:+42439235 None:intergenic
CAATGAAGGAAAATATCACC+TGG 0.578377 8_3:+42440116 None:intergenic
GTTGCTATGAAGATCGGTCC+TGG 0.578469 8_3:-42434447 Msa1288970:CDS
TTTATAGAAAACCACGACAC+TGG 0.578589 8_3:-42435859 Msa1288970:CDS
AAATGCACCTGCAGTACCAC+CGG 0.579580 8_3:+42436575 None:intergenic
TGGTTATGTAAAGGACTACA+TGG 0.581785 8_3:-42436718 Msa1288970:CDS
TGGAGGCTTGACTTTGTCAG+AGG 0.583959 8_3:-42436750 Msa1288970:CDS
GAGTGAAGAGGCAGGCGAAG+AGG 0.586230 8_3:-42439393 Msa1288970:CDS
AAATATAATCTGCAGGTGGA+GGG 0.587924 8_3:-42441889 Msa1288970:intron
GAAAGTTGTAAAGAGTGAAG+AGG 0.588257 8_3:-42439405 Msa1288970:CDS
ATTATAGAGAAGGTTGCAGA+GGG 0.589865 8_3:-42434187 Msa1288970:three_prime_UTR
GTTGTAAAGAGTGAAGAGGC+AGG 0.590094 8_3:-42439401 Msa1288970:CDS
TGTTTCTGAGCATTTCCTAA+CGG 0.590931 8_3:+42440172 None:intergenic
TGAGGTTCTAAAGATACTGT+AGG 0.591536 8_3:+42439226 None:intergenic
ATGGTAGCTAATCTGTGGTA+GGG 0.591903 8_3:+42442757 None:intergenic
ACAGGCTTTAGTTTGTCCCA+AGG 0.592504 8_3:-42440940 Msa1288970:intron
CGGCCACCATCCCATAACAC+CGG 0.593039 8_3:+42435897 None:intergenic
GTAGCCAAAAGGAAGTGGAA+AGG 0.595926 8_3:-42439585 Msa1288970:intron
GCTTCTAAGACTATGTGCAA+TGG 0.597533 8_3:+42442919 None:intergenic
GATTTAGAAACGGATATACC+AGG 0.600340 8_3:-42440134 Msa1288970:CDS
CCACCATCCCATAACACCGG+GGG 0.607637 8_3:+42435900 None:intergenic
GATCAATGTTTGGAGCCGCA+TGG 0.607937 8_3:+42437763 None:intergenic
CATTATAGAGAAGGTTGCAG+AGG 0.608423 8_3:-42434188 Msa1288970:three_prime_UTR
AAGGAAAATAGTCAAGCAGA+AGG 0.609635 8_3:-42440254 Msa1288970:CDS
GGAGAGAGAAACTTATGGGG+TGG 0.609688 8_3:+42442646 None:intergenic
GGTATGAAATTGTATGCCAA+GGG 0.609727 8_3:-42439103 Msa1288970:CDS
GTTGACTGGATTAGTGCTGC+CGG 0.609834 8_3:-42436594 Msa1288970:CDS
GTGGTGGAGATGCTCATGAT+AGG 0.610657 8_3:+42442817 None:intergenic
CTACAAGATTTGGGAGCTGG+AGG 0.611194 8_3:-42434367 Msa1288970:CDS
GGGAGGGGCAACAAGAGTAG+TGG 0.612121 8_3:-42437795 Msa1288970:CDS
ATTTGGAGGTCGTCTCAACT+GGG 0.613014 8_3:-42438343 Msa1288970:CDS
AAATTGGATATGATGGATGG+AGG 0.615727 8_3:-42436767 Msa1288970:CDS
CTAGGTGGTTCATAATGACC+AGG 0.616324 8_3:+42434429 None:intergenic
ATGCTCATGATAGGTGGTCG+TGG 0.617470 8_3:+42442826 None:intergenic
AGAAGATTGAATCTGTTGAA+GGG 0.618052 8_3:+42442591 None:intergenic
ATCATAATCAAGATGCACAC+AGG 0.619941 8_3:-42436626 Msa1288970:CDS
AGGACGAGGAAACTGGCACT+TGG 0.620719 8_3:-42441041 Msa1288970:CDS
TTCGGATTCCAAAACAACCT+CGG 0.621124 8_3:+42439169 None:intergenic
AGCTACCGGAAGTTGAGAGA+GGG 0.621352 8_3:+42439456 None:intergenic
CCACGACACTGGTTCTACAC+AGG 0.621703 8_3:-42435848 Msa1288970:intron
ATAAAAGTAACGGCACGAGA+CGG 0.624117 8_3:+42435877 None:intergenic
TGGTACCATTGATGAACTGA+AGG 0.629503 8_3:-42438469 Msa1288970:CDS
TCATTGGGGAGTTTCTGGTG+TGG 0.629899 8_3:-42441779 Msa1288970:CDS
AATTCATGGTTAAATAACAA+GGG 0.635549 8_3:-42439494 Msa1288970:CDS
TTCACCATATGTATAACTGA+GGG 0.635616 8_3:+42436653 None:intergenic
AAATGGAAATCAGCTTGGGA+CGG 0.636057 8_3:-42434396 Msa1288970:CDS
TGGTTCAGAGAAAACAGTGG+TGG 0.636081 8_3:+42442801 None:intergenic
CATTGATGAACTGAAGGATG+TGG 0.641184 8_3:-42438463 Msa1288970:CDS
TTTCACCATATGTATAACTG+AGG 0.642730 8_3:+42436652 None:intergenic
GAGCTACCGGAAGTTGAGAG+AGG 0.643646 8_3:+42439455 None:intergenic
TGTGGTGGATGAGGAGCAGG+TGG 0.645049 8_3:+42440056 None:intergenic
ATGTGGTCAAAGAACACTGA+CGG 0.646715 8_3:+42435385 None:intergenic
TTTGGAGAGAGAAACTTATG+GGG 0.652371 8_3:+42442643 None:intergenic
GGTTAATGGTAGCTAATCTG+TGG 0.652438 8_3:+42442752 None:intergenic
CCCCACGGAAAAGAAATGCA+AGG 0.652968 8_3:-42435439 Msa1288970:CDS
CTCAGTTCCAGCTTTCTCCG+AGG 0.653474 8_3:-42439207 Msa1288970:CDS
GGAAGCTATTGTGGAATCCG+AGG 0.655431 8_3:-42439186 Msa1288970:CDS
CTGGTGTGGATGATATTGGA+AGG 0.663725 8_3:-42441765 Msa1288970:intron
GGAAATTGGATTCTTCATTG+GGG 0.663839 8_3:-42441793 Msa1288970:CDS
TAATGTCGGGAACAGGCACA+GGG 0.666101 8_3:-42439124 Msa1288970:CDS
CCTGTGTAGAACCAGTGTCG+TGG 0.669185 8_3:+42435848 None:intergenic
GCTTATACTCTTACTCACCC+AGG 0.670081 8_3:-42435412 Msa1288970:CDS
TCCGTAAGATAGTTTACCAG+AGG 0.670426 8_3:+42440988 None:intergenic
TTGGATGATGGTGTCAGGTG+TGG 0.674216 8_3:-42434249 Msa1288970:three_prime_UTR
GTGGAGATGCTCATGATAGG+TGG 0.684639 8_3:+42442820 None:intergenic
CCAGGAGGTATCATATCACG+GGG 0.685523 8_3:+42441411 None:intergenic
GGCACTTGGTATCAACACAA+AGG 0.687243 8_3:-42441027 Msa1288970:CDS
GACTGGATTAGTGCTGCCGG+TGG 0.691174 8_3:-42436591 Msa1288970:CDS
TGGCGCTTGTCGGATCAGCA+GGG 0.692297 8_3:-42435928 Msa1288970:CDS
GCCACCATCCCATAACACCG+GGG 0.702449 8_3:+42435899 None:intergenic
CACCATCCCATAACACCGGG+GGG 0.704813 8_3:+42435901 None:intergenic
TCTGGTAAACTATCTTACGG+AGG 0.707584 8_3:-42440986 Msa1288970:CDS
GGAGGTATCATATCACGGGG+TGG 0.712340 8_3:+42441414 None:intergenic
GGTCATTGGAGATTTCCCCA+CGG 0.723859 8_3:-42435454 Msa1288970:CDS
TAGTGGAGATAGTTTCCATG+CGG 0.748696 8_3:-42437778 Msa1288970:CDS
GAGTGGTTCAGAGAAAACAG+TGG 0.759302 8_3:+42442798 None:intergenic
TTTATAGGAATAGATCCAGG+AGG 0.764420 8_3:+42441396 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGTATATATCAAATTTT+TGG - chr8_3:42434383-42434402 Msa1288970:CDS 10.0%
!!! AAAAATTATGATTTTTATAG+TGG - chr8_3:42434458-42434477 Msa1288970:CDS 10.0%
!! GATTAAATAAATTGATTAAA+AGG + chr8_3:42436456-42436475 None:intergenic 10.0%
!! AATAGATAAATCTTATAATA+TGG - chr8_3:42437030-42437049 Msa1288970:intron 10.0%
!!! AATTTTACTTTTTTTTTTAG+GGG + chr8_3:42437186-42437205 None:intergenic 10.0%
!! TTTGAATTATATATTAAGAT+TGG - chr8_3:42437240-42437259 Msa1288970:intron 10.0%
!!! ATACTTTTTATAATTATTTC+CGG + chr8_3:42438083-42438102 None:intergenic 10.0%
!!! TAATAATTTCAAATTTGTTT+TGG - chr8_3:42440780-42440799 Msa1288970:intron 10.0%
!! ATATTATAAATCTACAAAAA+TGG + chr8_3:42441222-42441241 None:intergenic 10.0%
!!! TATATATCAAATTTTTGGAT+TGG - chr8_3:42434388-42434407 Msa1288970:CDS 15.0%
!!! AAATCATAATTTTTTCATCT+GGG + chr8_3:42434452-42434471 None:intergenic 15.0%
!!! AAAATCATAATTTTTTCATC+TGG + chr8_3:42434453-42434472 None:intergenic 15.0%
!! GAAATAGTAAAAATGTTAAA+GGG - chr8_3:42434480-42434499 Msa1288970:CDS 15.0%
!!! AATTTTGTTTTGTATAAATG+TGG - chr8_3:42434550-42434569 Msa1288970:intron 15.0%
!!! ATCTATTTCTAAAACAAAAA+AGG + chr8_3:42434936-42434955 None:intergenic 15.0%
!!! AGATTATATTAATTTGTAAC+AGG - chr8_3:42435349-42435368 Msa1288970:CDS 15.0%
!!! AAATATTTTGGATTTAGAAA+CGG - chr8_3:42436755-42436774 Msa1288970:CDS 15.0%
!! AAATATAGAAAACGAAAAAA+CGG + chr8_3:42436920-42436939 None:intergenic 15.0%
!! TATTACGATTTAAATAAATG+CGG + chr8_3:42437014-42437033 None:intergenic 15.0%
!! TTAAGATAAATGAAAATTCA+TGG - chr8_3:42437391-42437410 Msa1288970:intron 15.0%
!!! TATTTCATTGATTATTTCAT+TGG + chr8_3:42437550-42437569 None:intergenic 15.0%
!! ATGAAATAATCAATGAAATA+AGG - chr8_3:42437550-42437569 Msa1288970:intron 15.0%
!! TTTAAATTATATAAATCCCT+TGG + chr8_3:42437957-42437976 None:intergenic 15.0%
!! TGTTTATAATTACACTATAA+TGG + chr8_3:42441257-42441276 None:intergenic 15.0%
!!! TATCATAAAATTTCTTTTGA+AGG - chr8_3:42441423-42441442 Msa1288970:CDS 15.0%
!!! ATCATAAAATTTCTTTTGAA+GGG - chr8_3:42441424-42441443 Msa1288970:CDS 15.0%
!! TTAAAATGAATACATATTTG+AGG - chr8_3:42442029-42442048 Msa1288970:intron 15.0%
!!! AAATATTTTCACAAAGTAAA+CGG - chr8_3:42442065-42442084 Msa1288970:intron 15.0%
!!! ATTCATAAATCTTTGAAAAT+AGG + chr8_3:42442227-42442246 None:intergenic 15.0%
!! AATATATGAATTGTAAACAT+AGG + chr8_3:42442816-42442835 None:intergenic 15.0%
!! ATAGTTAATAATATTGGTAG+TGG + chr8_3:42434206-42434225 None:intergenic 20.0%
!! ACTACCAATATTATTAACTA+TGG - chr8_3:42434205-42434224 Msa1288970:three_prime_UTR 20.0%
!! AGAACCATAGTTAATAATAT+TGG + chr8_3:42434212-42434231 None:intergenic 20.0%
!! GGAAATAGTAAAAATGTTAA+AGG - chr8_3:42434479-42434498 Msa1288970:CDS 20.0%
!!! TTTGTGACTTTCTTTTTTAT+GGG + chr8_3:42434841-42434860 None:intergenic 20.0%
!! ACAAAAAAGGAAAATAAGTA+AGG + chr8_3:42434923-42434942 None:intergenic 20.0%
!! AGAAATAGATAGATATAGTA+TGG - chr8_3:42434946-42434965 Msa1288970:intron 20.0%
!! TGTTTATAAGATTAGATCAA+GGG - chr8_3:42435038-42435057 Msa1288970:intron 20.0%
!! GAAATTAAAACCATGATATA+GGG + chr8_3:42436055-42436074 None:intergenic 20.0%
!! AGAAATTAAAACCATGATAT+AGG + chr8_3:42436056-42436075 None:intergenic 20.0%
!!! CATGGTTTTAATTTCTTTTA+TGG - chr8_3:42436060-42436079 Msa1288970:intron 20.0%
!!! CGATTTGAAATATAACAATA+TGG - chr8_3:42436272-42436291 Msa1288970:intron 20.0%
!! TTAAAATTCGAATTAATGTC+AGG + chr8_3:42436337-42436356 None:intergenic 20.0%
!!! AGAAACAGCTAAAAATATTT+TGG - chr8_3:42436743-42436762 Msa1288970:CDS 20.0%
!! AAATTCATGGTTAAATAACA+AGG - chr8_3:42437404-42437423 Msa1288970:intron 20.0%
!! AATTCATGGTTAAATAACAA+GGG - chr8_3:42437405-42437424 Msa1288970:intron 20.0%
!! TGAAATAATGAGATCTTTAA+GGG + chr8_3:42438001-42438020 None:intergenic 20.0%
!! ATGAAATAATGAGATCTTTA+AGG + chr8_3:42438002-42438021 None:intergenic 20.0%
!!! TAACTGTTATTTTATATCTC+AGG - chr8_3:42438405-42438424 Msa1288970:CDS 20.0%
!!! TGTTTCTGACAATATAAAAA+AGG + chr8_3:42438665-42438684 None:intergenic 20.0%
!! AATATTCTTTCTTCTATACA+GGG - chr8_3:42439083-42439102 Msa1288970:CDS 20.0%
!!! ATTCATATTTTGTTTAGTCT+TGG - chr8_3:42439324-42439343 Msa1288970:CDS 20.0%
!!! AATATTTTAGATGATACCTT+TGG - chr8_3:42440042-42440061 Msa1288970:CDS 20.0%
!! ATTGTAAACAAATTCCAATA+AGG + chr8_3:42440522-42440541 None:intergenic 20.0%
!!! TTACTAAGCTAATTTTGAAA+GGG + chr8_3:42441087-42441106 None:intergenic 20.0%
!!! ATTACTAAGCTAATTTTGAA+AGG + chr8_3:42441088-42441107 None:intergenic 20.0%
!! TTTATATAAGTAGTAGTGAA+AGG - chr8_3:42441296-42441315 Msa1288970:intron 20.0%
!! TTATATAAGTAGTAGTGAAA+GGG - chr8_3:42441297-42441316 Msa1288970:intron 20.0%
!!! TTTTATAGTGAGAAAAAATG+TGG + chr8_3:42441534-42441553 None:intergenic 20.0%
!! TCACTATAAAAATGAAATAG+CGG - chr8_3:42441543-42441562 Msa1288970:intron 20.0%
!! ACTGAAATTATCTAATTCAA+TGG - chr8_3:42441729-42441748 Msa1288970:intron 20.0%
!! AATTATCTAATTCAATGGTT+TGG - chr8_3:42441734-42441753 Msa1288970:intron 20.0%
!!! AATGATGAAAACAATTCTTT+TGG + chr8_3:42441942-42441961 None:intergenic 20.0%
!!! AATATTTTCACAAAGTAAAC+GGG - chr8_3:42442066-42442085 Msa1288970:intron 20.0%
!!! ATTATTTTCTCATATCAAGT+AGG + chr8_3:42442140-42442159 None:intergenic 20.0%
!! TTAAAATTACCAAATCAGAA+AGG - chr8_3:42442399-42442418 Msa1288970:intron 20.0%
!! TAAAATTACCAAATCAGAAA+GGG - chr8_3:42442400-42442419 Msa1288970:intron 20.0%
!!! AGATATACAAGATTTTCTAA+AGG + chr8_3:42442601-42442620 None:intergenic 20.0%
!!! AGTTTCAAATATTGATTTGA+AGG + chr8_3:42442777-42442796 None:intergenic 20.0%
!! TCAATTACTTCAAAAGTTTA+TGG + chr8_3:42442897-42442916 None:intergenic 20.0%
!!! TAAACTTTTGAAGTAATTGA+TGG - chr8_3:42442897-42442916 Msa1288970:five_prime_UTR 20.0%
!!! AAACTTTTGAAGTAATTGAT+GGG - chr8_3:42442898-42442917 Msa1288970:five_prime_UTR 20.0%
!! GTAGCAAAAGTTTCAAATTT+TGG + chr8_3:42434277-42434296 None:intergenic 25.0%
! GTATAAATGTGGTAAAAGTT+TGG - chr8_3:42434561-42434580 Msa1288970:intron 25.0%
!!! CTTTGTGACTTTCTTTTTTA+TGG + chr8_3:42434842-42434861 None:intergenic 25.0%
!! TAAACCCTTTAGAAAAAGTA+AGG + chr8_3:42434890-42434909 None:intergenic 25.0%
! GTGTTTATAAGATTAGATCA+AGG - chr8_3:42435037-42435056 Msa1288970:intron 25.0%
! TTGAATCGGAAGAAAAAAAA+CGG - chr8_3:42435207-42435226 Msa1288970:intron 25.0%
! AAGTTGACAAAAAAAATAGC+CGG - chr8_3:42435241-42435260 Msa1288970:intron 25.0%
! AAGTTTAGGTAATGATTCAT+TGG - chr8_3:42435270-42435289 Msa1288970:intron 25.0%
! AAACTATTGTCTACCTTTAT+AGG + chr8_3:42435521-42435540 None:intergenic 25.0%
! TCATACTTAAACATTCTACA+TGG + chr8_3:42435587-42435606 None:intergenic 25.0%
! AAGTATGAAGTGAAAATTTC+AGG - chr8_3:42435599-42435618 Msa1288970:intron 25.0%
!! AGCGATTAATTTTGTTCTTA+AGG - chr8_3:42435725-42435744 Msa1288970:intron 25.0%
! AATTTAATTGGACCTAAAAC+AGG - chr8_3:42435941-42435960 Msa1288970:CDS 25.0%
! ATATAGAAACAGGAAACAAT+TGG + chr8_3:42436130-42436149 None:intergenic 25.0%
! TGAAAGCAATATATAGAAAC+AGG + chr8_3:42436140-42436159 None:intergenic 25.0%
!! TCAGAAAAAAGAAATTTGCT+TGG - chr8_3:42436309-42436328 Msa1288970:intron 25.0%
! CTCATTAAATAAATGTTGTG+AGG + chr8_3:42436492-42436511 None:intergenic 25.0%
!! ATCTAAAGTTATCCTGAATT+CGG - chr8_3:42436569-42436588 Msa1288970:CDS 25.0%
! TGAATCAGAAAATCCAAAAA+AGG - chr8_3:42436626-42436645 Msa1288970:CDS 25.0%
! TTTCAACTCTATTGTTTCAT+TGG - chr8_3:42436947-42436966 Msa1288970:intron 25.0%
! ATATAAAAGAGGAAGATAGA+AGG + chr8_3:42437063-42437082 None:intergenic 25.0%
! CAACTTCAGTAATATAAAAG+AGG + chr8_3:42437074-42437093 None:intergenic 25.0%
!! AATCAATGAAATAAGGCATT+TGG - chr8_3:42437557-42437576 Msa1288970:intron 25.0%
! TCTTTCAATTTCTTGAAGAA+TGG + chr8_3:42437640-42437659 None:intergenic 25.0%
! AGCATATAGCATATATTATC+CGG + chr8_3:42438260-42438279 None:intergenic 25.0%
! TATCATGTGGTGATTTATAA+GGG - chr8_3:42438331-42438350 Msa1288970:CDS 25.0%
! AATCATACATCTTTGCAAAT+AGG - chr8_3:42438370-42438389 Msa1288970:CDS 25.0%
!!! GTTATTTTATATCTCAGGTA+TGG - chr8_3:42438410-42438429 Msa1288970:CDS 25.0%
! GTGAAAGAATTTCATAAAGT+TGG - chr8_3:42438458-42438477 Msa1288970:CDS 25.0%
! ATCAGAATAAGAATGGTATT+TGG - chr8_3:42438528-42438547 Msa1288970:intron 25.0%
!! AATGGTATTTGGAACATATT+TGG - chr8_3:42438539-42438558 Msa1288970:intron 25.0%
! GAATATTCTTTCTTCTATAC+AGG - chr8_3:42439082-42439101 Msa1288970:CDS 25.0%
! ATATTCTTTCTTCTATACAG+GGG - chr8_3:42439084-42439103 Msa1288970:CDS 25.0%
! TGAGAAACGATATTAAAGAA+TGG - chr8_3:42439174-42439193 Msa1288970:CDS 25.0%
! ATATTAAAGAATGGTTATGC+TGG - chr8_3:42439183-42439202 Msa1288970:CDS 25.0%
! GACTAATGAAATTGAGAATT+TGG + chr8_3:42439223-42439242 None:intergenic 25.0%
!! TTTCAATTGACACAACATTT+TGG + chr8_3:42439245-42439264 None:intergenic 25.0%
! GCTGAAATTAAGTAAAGAAA+TGG - chr8_3:42439762-42439781 Msa1288970:intron 25.0%
! TAAAGAAATGGATCAAACAA+TGG - chr8_3:42439774-42439793 Msa1288970:intron 25.0%
! TGAAATGAAGGAAAATAATG+AGG + chr8_3:42439951-42439970 None:intergenic 25.0%
! GTTATCGTATTACAAATTAC+AGG - chr8_3:42440069-42440088 Msa1288970:CDS 25.0%
! ATTGTAACTTCACTGTTATT+GGG + chr8_3:42440597-42440616 None:intergenic 25.0%
!!! AATGCTTCTTTTGAAAGAAT+TGG - chr8_3:42440620-42440639 Msa1288970:intron 25.0%
! TGTCTACTAAAAAGCAAAAT+TGG + chr8_3:42440871-42440890 None:intergenic 25.0%
! GATGACATTTCATTTGAATT+TGG - chr8_3:42440916-42440935 Msa1288970:intron 25.0%
!! GTGGTTTTCTATAAAAGTAA+CGG + chr8_3:42441035-42441054 None:intergenic 25.0%
!!! TACTAAGCTAATTTTGAAAG+GGG + chr8_3:42441086-42441105 None:intergenic 25.0%
! CGCATCAAAACAATATTTAA+TGG + chr8_3:42441398-42441417 None:intergenic 25.0%
! GATAAAACACGAAAAACATA+AGG - chr8_3:42441783-42441802 Msa1288970:CDS 25.0%
!!! TTCACACAAATTTTAGGAAA+AGG + chr8_3:42441842-42441861 None:intergenic 25.0%
!! GTAAAGTTCACACAAATTTT+AGG + chr8_3:42441848-42441867 None:intergenic 25.0%
!! ATATTTTCACAAAGTAAACG+GGG - chr8_3:42442067-42442086 Msa1288970:intron 25.0%
! TAACACCAAGGAAAAAATTT+AGG + chr8_3:42442093-42442112 None:intergenic 25.0%
!!! AAATTTTTTCCTTGGTGTTA+TGG - chr8_3:42442093-42442112 Msa1288970:intron 25.0%
! CTTATTGTATAATTGGATGA+TGG - chr8_3:42442638-42442657 Msa1288970:CDS 25.0%
!! CAAAAAGTGTATTGAACAAT+TGG - chr8_3:42442854-42442873 Msa1288970:five_prime_UTR 25.0%
AGCTAATACTAAGAAGCAAA+AGG - chr8_3:42434000-42434019 Msa1288970:three_prime_UTR 30.0%
!! TTTTGGAGAGAGAAACTTAT+GGG + chr8_3:42434260-42434279 None:intergenic 30.0%
!! ATTTTGGAGAGAGAAACTTA+TGG + chr8_3:42434261-42434280 None:intergenic 30.0%
AGAAGATTGAATCTGTTGAA+GGG + chr8_3:42434311-42434330 None:intergenic 30.0%
!! TTGGATTGGAACATTGTTTT+TGG - chr8_3:42434402-42434421 Msa1288970:CDS 30.0%
!! TTGGTTTGTAGAGAATATTC+TGG - chr8_3:42434421-42434440 Msa1288970:CDS 30.0%
AAAAGCTGAAATTGTTAGAC+CGG + chr8_3:42434683-42434702 None:intergenic 30.0%
!!! TCTCTCCTTACTTTTTCTAA+AGG - chr8_3:42434882-42434901 Msa1288970:intron 30.0%
!!! CTCTCCTTACTTTTTCTAAA+GGG - chr8_3:42434883-42434902 Msa1288970:intron 30.0%
GATAGATATAGTATGGACTT+TGG - chr8_3:42434953-42434972 Msa1288970:intron 30.0%
TTGCATGAAATATAATCTGC+AGG - chr8_3:42435003-42435022 Msa1288970:intron 30.0%
AAGAATTCAGAGCTTATAGT+TGG - chr8_3:42435070-42435089 Msa1288970:intron 30.0%
AGAATTCAGAGCTTATAGTT+GGG - chr8_3:42435071-42435090 Msa1288970:intron 30.0%
AGGAAATTGGATTCTTCATT+GGG - chr8_3:42435105-42435124 Msa1288970:intron 30.0%
! TGGAAGGTACATGTTAAATA+AGG - chr8_3:42435150-42435169 Msa1288970:intron 30.0%
CATATCGAGATTCATTGAAT+CGG - chr8_3:42435193-42435212 Msa1288970:intron 30.0%
AGTTGACAAAAAAAATAGCC+GGG - chr8_3:42435242-42435261 Msa1288970:intron 30.0%
TTTGTAACAGGATAAACACT+AGG - chr8_3:42435361-42435380 Msa1288970:CDS 30.0%
TTGTAACAGGATAAACACTA+GGG - chr8_3:42435362-42435381 Msa1288970:CDS 30.0%
! GATGATGATGATTTCTTCAA+AGG + chr8_3:42435642-42435661 None:intergenic 30.0%
ATGTCTATACAGTTAGCAAT+TGG - chr8_3:42435751-42435770 Msa1288970:intron 30.0%
CTAAAATTTGCCCTATATCA+TGG - chr8_3:42436042-42436061 Msa1288970:intron 30.0%
TGTGAGATAGAATGTATCAT+AGG + chr8_3:42436104-42436123 None:intergenic 30.0%
!!! TTTGCTGCACTAGTTTTTAA+TGG + chr8_3:42436199-42436218 None:intergenic 30.0%
TTGAAAATTGAGAAGACAGA+TGG + chr8_3:42436391-42436410 None:intergenic 30.0%
! GCTTGACTATTTTCCTTTTT+TGG + chr8_3:42436642-42436661 None:intergenic 30.0%
! AGGTGATATTTTCCTTCATT+GGG - chr8_3:42436785-42436804 Msa1288970:intron 30.0%
TAGAGATGATTCAAGAAGTT+GGG - chr8_3:42436815-42436834 Msa1288970:intron 30.0%
TCTTTATATGCTACAGTTTG+TGG + chr8_3:42436864-42436883 None:intergenic 30.0%
TAGCATATAAAGACACAGTT+TGG - chr8_3:42436871-42436890 Msa1288970:intron 30.0%
! GAATCAGATCTAGAATCTTA+TGG + chr8_3:42436989-42437008 None:intergenic 30.0%
TCTTCAAGAAATTGAAAGAC+TGG - chr8_3:42437641-42437660 Msa1288970:intron 30.0%
AATTGGGAGTCTAATAAATC+TGG - chr8_3:42437822-42437841 Msa1288970:intron 30.0%
AGTCTAATAAATCTGGAAGA+TGG - chr8_3:42437829-42437848 Msa1288970:intron 30.0%
CTATCATGTGGTGATTTATA+AGG - chr8_3:42438330-42438349 Msa1288970:CDS 30.0%
!!! ATTTTCAGGTTTGTTTGTGA+GGG - chr8_3:42438609-42438628 Msa1288970:intron 30.0%
!! ACATATCTAGTTCCTTTTTG+TGG - chr8_3:42438682-42438701 Msa1288970:intron 30.0%
ACAACATAGAATGATATGCT+AGG + chr8_3:42438922-42438941 None:intergenic 30.0%
!!! TGAAAGTTCGTTTTGTTTGT+AGG - chr8_3:42439006-42439025 Msa1288970:intron 30.0%
!! TTGTTTAGTCTTGGTTTCAT+TGG - chr8_3:42439333-42439352 Msa1288970:CDS 30.0%
GTTAAAAAGAGACAGAAAGT+GGG + chr8_3:42439420-42439439 None:intergenic 30.0%
!! AATTTCAGCTTCTGAAATCA+GGG + chr8_3:42439751-42439770 None:intergenic 30.0%
!! TAATTTCAGCTTCTGAAATC+AGG + chr8_3:42439752-42439771 None:intergenic 30.0%
ATGGAAAGAAAAACTGTAGA+AGG - chr8_3:42439793-42439812 Msa1288970:intron 30.0%
TGGAAAGAAAAACTGTAGAA+GGG - chr8_3:42439794-42439813 Msa1288970:intron 30.0%
GCTACAATTACATGAAATGA+AGG + chr8_3:42439963-42439982 None:intergenic 30.0%
ATACAATGAAAACACTGTGT+AGG + chr8_3:42440017-42440036 None:intergenic 30.0%
TAATACGATAACTACTCCAA+AGG + chr8_3:42440061-42440080 None:intergenic 30.0%
! TTTCTTCTCTGAAAATGACA+CGG + chr8_3:42440115-42440134 None:intergenic 30.0%
!! GTCATTTTCAGAGAAGAAAT+TGG - chr8_3:42440116-42440135 Msa1288970:CDS 30.0%
AGAGAAGAAATTGGATATGA+TGG - chr8_3:42440125-42440144 Msa1288970:CDS 30.0%
! AAGAAATTGGATATGATGGA+TGG - chr8_3:42440129-42440148 Msa1288970:CDS 30.0%
TTCACCATATGTATAACTGA+GGG + chr8_3:42440249-42440268 None:intergenic 30.0%
TTTCACCATATGTATAACTG+AGG + chr8_3:42440250-42440269 None:intergenic 30.0%
CAGTTATACATATGGTGAAA+TGG - chr8_3:42440250-42440269 Msa1288970:CDS 30.0%
CATTTGATGTTACAACCAAA+GGG - chr8_3:42440342-42440361 Msa1288970:CDS 30.0%
GTAAACAAATTCCAATAAGG+TGG + chr8_3:42440519-42440538 None:intergenic 30.0%
TTGTAACTTCACTGTTATTG+GGG + chr8_3:42440596-42440615 None:intergenic 30.0%
CATTGTAACTTCACTGTTAT+TGG + chr8_3:42440598-42440617 None:intergenic 30.0%
TCATGAGTTCAAATCCTATA+CGG - chr8_3:42440716-42440735 Msa1288970:intron 30.0%
!!! GTTTTTAAGTATCCTTAGAG+AGG + chr8_3:42440823-42440842 None:intergenic 30.0%
CAAATGAAATGTCATCTAGT+AGG + chr8_3:42440912-42440931 None:intergenic 30.0%
! GTGGCATTGTTTAAAACAAA+AGG + chr8_3:42441150-42441169 None:intergenic 30.0%
TAAAACTCGAGATTCTGATT+TGG - chr8_3:42441173-42441192 Msa1288970:intron 30.0%
!! AATTTCTTTTGAAGGGTCAT+TGG - chr8_3:42441431-42441450 Msa1288970:intron 30.0%
! CGTTTATGTGGATATTTTCT+GGG - chr8_3:42441652-42441671 Msa1288970:intron 30.0%
! TGTTTTGCACAAAGTAAATG+AGG + chr8_3:42441809-42441828 None:intergenic 30.0%
!! TTCTCGTTTTCACTATTTCT+TGG - chr8_3:42442267-42442286 Msa1288970:intron 30.0%
CCTTGAACATGAAAATAGAA+AGG + chr8_3:42442379-42442398 None:intergenic 30.0%
! CCTTTCTATTTTCATGTTCA+AGG - chr8_3:42442376-42442395 Msa1288970:intron 30.0%
GAAAAAGTTGCTATGAAGAT+CGG - chr8_3:42442446-42442465 Msa1288970:intron 30.0%
TATACAATAAGCCTATGGTA+AGG + chr8_3:42442629-42442648 None:intergenic 30.0%
CCAATTATACAATAAGCCTA+TGG + chr8_3:42442634-42442653 None:intergenic 30.0%
CCATAGGCTTATTGTATAAT+TGG - chr8_3:42442631-42442650 Msa1288970:CDS 30.0%
!! CAGAAGTATCATTATAGAGA+AGG - chr8_3:42442702-42442721 Msa1288970:CDS 30.0%
ACAGTATATCAGTTCTTAGA+TGG + chr8_3:42442925-42442944 None:intergenic 30.0%
TGTAACATCTTCCTTGCAAA+AGG - chr8_3:42434042-42434061 Msa1288970:three_prime_UTR 35.0%
! GAGAGTTTGAAATTGAAGAG+TGG + chr8_3:42434121-42434140 None:intergenic 35.0%
!! ATTTGGCTTGAAACGGTTAA+TGG + chr8_3:42434164-42434183 None:intergenic 35.0%
!! GTGAAGAATTTGGCTTGAAA+CGG + chr8_3:42434171-42434190 None:intergenic 35.0%
ACTATGGTTCTTCTTGTTCT+TGG - chr8_3:42434221-42434240 Msa1288970:three_prime_UTR 35.0%
TTTGGAGAGAGAAACTTATG+GGG + chr8_3:42434259-42434278 None:intergenic 35.0%
CAGAAGATTGAATCTGTTGA+AGG + chr8_3:42434312-42434331 None:intergenic 35.0%
ACCAGTTCAATTCTGTTGAT+GGG + chr8_3:42434361-42434380 None:intergenic 35.0%
TACCAGTTCAATTCTGTTGA+TGG + chr8_3:42434362-42434381 None:intergenic 35.0%
! GTAAAAATGTTAAAGGGCGT+TGG - chr8_3:42434486-42434505 Msa1288970:CDS 35.0%
CTTGTGTGTGACTATTCAAT+TGG + chr8_3:42434628-42434647 None:intergenic 35.0%
ATTGAATAGTCACACACAAG+TGG - chr8_3:42434628-42434647 Msa1288970:intron 35.0%
TTGAATAGTCACACACAAGT+GGG - chr8_3:42434629-42434648 Msa1288970:intron 35.0%
!! ATAGTATGGACTTTGGTGTT+TGG - chr8_3:42434960-42434979 Msa1288970:intron 35.0%
CATGAAATATAATCTGCAGG+TGG - chr8_3:42435006-42435025 Msa1288970:intron 35.0%
AAATATAATCTGCAGGTGGA+GGG - chr8_3:42435010-42435029 Msa1288970:intron 35.0%
CAATGAAGAATCCAATTTCC+TGG + chr8_3:42435106-42435125 None:intergenic 35.0%
CAGGAAATTGGATTCTTCAT+TGG - chr8_3:42435104-42435123 Msa1288970:intron 35.0%
GGAAATTGGATTCTTCATTG+GGG - chr8_3:42435106-42435125 Msa1288970:intron 35.0%
ATTACCTAAACTTAGTGACC+CGG + chr8_3:42435263-42435282 None:intergenic 35.0%
TACACTGTAAGCATCTTCAT+TGG + chr8_3:42435436-42435455 None:intergenic 35.0%
AGTGTAAATCTTGATTGTGC+AGG - chr8_3:42435450-42435469 Msa1288970:CDS 35.0%
GTGTAAATCTTGATTGTGCA+GGG - chr8_3:42435451-42435470 Msa1288970:CDS 35.0%
TTTATAGGAATAGATCCAGG+AGG + chr8_3:42435506-42435525 None:intergenic 35.0%
TCCTGGATCTATTCCTATAA+AGG - chr8_3:42435505-42435524 Msa1288970:intron 35.0%
ACCTTTATAGGAATAGATCC+AGG + chr8_3:42435509-42435528 None:intergenic 35.0%
GAAATCATCATCATCATCAC+CGG - chr8_3:42435647-42435666 Msa1288970:intron 35.0%
!! TCATAAAGAGTATCTCCTTC+CGG + chr8_3:42435669-42435688 None:intergenic 35.0%
GAGATACTCTTTATGAAGTC+AGG - chr8_3:42435673-42435692 Msa1288970:intron 35.0%
ACTCTTTATGAAGTCAGGAT+CGG - chr8_3:42435678-42435697 Msa1288970:intron 35.0%
! TTTTTCCCTCCATTCCAATT+TGG - chr8_3:42435819-42435838 Msa1288970:intron 35.0%
! TTTTCCCTCCATTCCAATTT+GGG - chr8_3:42435820-42435839 Msa1288970:intron 35.0%
TCCTCTGGTAAACTATCTTA+CGG - chr8_3:42435910-42435929 Msa1288970:CDS 35.0%
ACGGAGGATGCTAATTTAAT+TGG - chr8_3:42435929-42435948 Msa1288970:CDS 35.0%
! GACAAACTAAAGCCTGTTTT+AGG + chr8_3:42435956-42435975 None:intergenic 35.0%
AGGGATTTCAAAATCACCTT+GGG + chr8_3:42435978-42435997 None:intergenic 35.0%
AAACTAGTGCAGCAAAGAAA+AGG - chr8_3:42436203-42436222 Msa1288970:intron 35.0%
! ATCTTGTGTCGATAAAAGCT+TGG - chr8_3:42436356-42436375 Msa1288970:intron 35.0%
TGATCTGACTTACATTTCAC+TGG - chr8_3:42436514-42436533 Msa1288970:intron 35.0%
GCTATCTTGAACTTTGTCAT+CGG + chr8_3:42436601-42436620 None:intergenic 35.0%
AAGGAAAATAGTCAAGCAGA+AGG - chr8_3:42436645-42436664 Msa1288970:CDS 35.0%
ACAGTAACTTCCTTGGTTAA+AGG + chr8_3:42436687-42436706 None:intergenic 35.0%
GTTATTGACAGTAACTTCCT+TGG + chr8_3:42436694-42436713 None:intergenic 35.0%
! TGTTTCTGAGCATTTCCTAA+CGG + chr8_3:42436730-42436749 None:intergenic 35.0%
GATTTAGAAACGGATATACC+AGG - chr8_3:42436765-42436784 Msa1288970:CDS 35.0%
CAATGAAGGAAAATATCACC+TGG + chr8_3:42436786-42436805 None:intergenic 35.0%
! CAGGTGATATTTTCCTTCAT+TGG - chr8_3:42436784-42436803 Msa1288970:intron 35.0%
! GGTGATATTTTCCTTCATTG+GGG - chr8_3:42436786-42436805 Msa1288970:intron 35.0%
GTAGAGATGATTCAAGAAGT+TGG - chr8_3:42436814-42436833 Msa1288970:intron 35.0%
TTATATGCTACAGTTTGTGG+TGG + chr8_3:42436861-42436880 None:intergenic 35.0%
AGTTTGGCGAACTCAATTAA+AGG - chr8_3:42436887-42436906 Msa1288970:intron 35.0%
!! CTTTTGGCTACATAACAGAT+CGG + chr8_3:42437305-42437324 None:intergenic 35.0%
AAGTTCAGCACAAATCTCTT+TGG - chr8_3:42437338-42437357 Msa1288970:intron 35.0%
AGTTCAGCACAAATCTCTTT+GGG - chr8_3:42437339-42437358 Msa1288970:intron 35.0%
!! TCTTTGGGAGAAGAATTTTC+AGG - chr8_3:42437354-42437373 Msa1288970:intron 35.0%
GAAAGTTGTAAAGAGTGAAG+AGG - chr8_3:42437494-42437513 Msa1288970:intron 35.0%
! GAAATAAGGCATTTGGTTAC+TGG - chr8_3:42437564-42437583 Msa1288970:intron 35.0%
AATGGTTTCTTGAGCTTCTT+TGG + chr8_3:42437622-42437641 None:intergenic 35.0%
!! TGAGGTTCTAAAGATACTGT+AGG + chr8_3:42437676-42437695 None:intergenic 35.0%
!!! ATTATTTTTGGAGGCAACTC+AGG + chr8_3:42437759-42437778 None:intergenic 35.0%
GTTGCCTCCAAAAATAATGT+CGG - chr8_3:42437761-42437780 Msa1288970:CDS 35.0%
TTGCCTCCAAAAATAATGTC+GGG - chr8_3:42437762-42437781 Msa1288970:CDS 35.0%
GGTATGAAATTGTATGCCAA+GGG - chr8_3:42437796-42437815 Msa1288970:CDS 35.0%
TTGTATGCCAAGGGTTTAAT+TGG - chr8_3:42437805-42437824 Msa1288970:intron 35.0%
TGTATGCCAAGGGTTTAATT+GGG - chr8_3:42437806-42437825 Msa1288970:intron 35.0%
TAAATCTGGAAGATGGTACA+TGG - chr8_3:42437836-42437855 Msa1288970:intron 35.0%
!! CTCTTGGCTTTACTGTTATT+TGG - chr8_3:42437889-42437908 Msa1288970:intron 35.0%
TTGTTTATGTCTACGAAGCA+CGG - chr8_3:42438024-42438043 Msa1288970:intron 35.0%
TAGATACAAGACCATGTGTT+AGG - chr8_3:42438221-42438240 Msa1288970:intron 35.0%
TAAGCAATTTGCCTAACACA+TGG + chr8_3:42438235-42438254 None:intergenic 35.0%
TTATAAGGGAGTAGGATGTA+AGG - chr8_3:42438345-42438364 Msa1288970:CDS 35.0%
! AAAGTTGGAATCAAAGTGCT+AGG - chr8_3:42438473-42438492 Msa1288970:CDS 35.0%
! GGTATTTGGAACATATTTGG+AGG - chr8_3:42438542-42438561 Msa1288970:intron 35.0%
CACAAACAAACCTGAAAATG+TGG + chr8_3:42438608-42438627 None:intergenic 35.0%
!!! CATTTTCAGGTTTGTTTGTG+AGG - chr8_3:42438608-42438627 Msa1288970:intron 35.0%
ATGGATCTTCAACCACAAAA+AGG + chr8_3:42438697-42438716 None:intergenic 35.0%
! TTTTTGTGGTTGAAGATCCA+TGG - chr8_3:42438696-42438715 Msa1288970:intron 35.0%
AAGTGTATAACCGAAATCCA+TGG + chr8_3:42438716-42438735 None:intergenic 35.0%
TATCAAATGTTCTCAGTCAC+TGG + chr8_3:42438755-42438774 None:intergenic 35.0%
! AAAACTCGTCACACATTTTC+AGG - chr8_3:42438784-42438803 Msa1288970:intron 35.0%
TGTTTCCCTAGTAAATAACG+TGG - chr8_3:42438836-42438855 Msa1288970:intron 35.0%
GTACTCCACGTTATTTACTA+GGG + chr8_3:42438844-42438863 None:intergenic 35.0%
TGTACTCCACGTTATTTACT+AGG + chr8_3:42438845-42438864 None:intergenic 35.0%
TATGATACTGCTGTCTTTCT+AGG - chr8_3:42439037-42439056 Msa1288970:CDS 35.0%
TCCAAACATTGATCATTCAC+AGG - chr8_3:42439145-42439164 Msa1288970:CDS 35.0%
TCCTGTGAATGATCAATGTT+TGG + chr8_3:42439149-42439168 None:intergenic 35.0%
! AAGAATGGTTATGCTGGTTA+AGG - chr8_3:42439189-42439208 Msa1288970:CDS 35.0%
CTTGGTTTCATTGGAAATGT+TGG - chr8_3:42439342-42439361 Msa1288970:CDS 35.0%
GAAATGTTGGAGAATTGAGA+TGG - chr8_3:42439355-42439374 Msa1288970:CDS 35.0%
CGTTAAAAAGAGACAGAAAG+TGG + chr8_3:42439421-42439440 None:intergenic 35.0%
!! AGAATGTTCTGAGACAAAGA+TGG + chr8_3:42439691-42439710 None:intergenic 35.0%
ATCTTTGTCTCAGAACATTC+TGG - chr8_3:42439690-42439709 Msa1288970:intron 35.0%
! TGATGGATGTGCATGAATAT+TGG + chr8_3:42439917-42439936 None:intergenic 35.0%
!! AAATTGGATATGATGGATGG+AGG - chr8_3:42440132-42440151 Msa1288970:CDS 35.0%
! TTGACTTTGTCAGAGGATTT+TGG - chr8_3:42440156-42440175 Msa1288970:CDS 35.0%
! TGACTTTGTCAGAGGATTTT+GGG - chr8_3:42440157-42440176 Msa1288970:CDS 35.0%
!!! ATTTTGGGGTGGTTATGTAA+AGG - chr8_3:42440172-42440191 Msa1288970:CDS 35.0%
TGGTTATGTAAAGGACTACA+TGG - chr8_3:42440181-42440200 Msa1288970:CDS 35.0%
! AACCAAACCATACTTTTGTG+TGG - chr8_3:42440208-42440227 Msa1288970:CDS 35.0%
! ACCAAACCATACTTTTGTGT+GGG - chr8_3:42440209-42440228 Msa1288970:CDS 35.0%
GATTCCCTCAGTTATACATA+TGG - chr8_3:42440242-42440261 Msa1288970:CDS 35.0%
ATCATAATCAAGATGCACAC+AGG - chr8_3:42440273-42440292 Msa1288970:CDS 35.0%
GCATTTGATGTTACAACCAA+AGG - chr8_3:42440341-42440360 Msa1288970:CDS 35.0%
! TACTAGTTTCACCACCTTAT+TGG - chr8_3:42440505-42440524 Msa1288970:intron 35.0%
CATGAGTTCAAATCCTATAC+GGG - chr8_3:42440717-42440736 Msa1288970:intron 35.0%
ATGAGTTCAAATCCTATACG+GGG - chr8_3:42440718-42440737 Msa1288970:intron 35.0%
CATTGGAAAGATGTGAGTAT+TGG - chr8_3:42440951-42440970 Msa1288970:CDS 35.0%
TTTATAGAAAACCACGACAC+TGG - chr8_3:42441040-42441059 Msa1288970:CDS 35.0%
! AGAATCTCGAGTTTTACTTG+TGG + chr8_3:42441169-42441188 None:intergenic 35.0%
TCACTCGTATAAGTGTTCAT+TGG - chr8_3:42441333-42441352 Msa1288970:intron 35.0%
! GCGTTTATGTGGATATTTTC+TGG - chr8_3:42441651-42441670 Msa1288970:intron 35.0%
! TTATGTGGATATTTTCTGGG+TGG - chr8_3:42441655-42441674 Msa1288970:intron 35.0%
! TTTGGCTGTAGCTATGTTTT+TGG - chr8_3:42441752-42441771 Msa1288970:intron 35.0%
! GTGAACTTTACTTGCTAACA+AGG - chr8_3:42441857-42441876 Msa1288970:CDS 35.0%
GAAACGAATTGCTAGTTGTA+GGG + chr8_3:42441981-42442000 None:intergenic 35.0%
TGAAACGAATTGCTAGTTGT+AGG + chr8_3:42441982-42442001 None:intergenic 35.0%
ATATGGTTTCCATAACACCA+AGG + chr8_3:42442105-42442124 None:intergenic 35.0%
TGGAAACCATATGCATGTTT+AGG - chr8_3:42442113-42442132 Msa1288970:intron 35.0%
GGAAACCATATGCATGTTTA+GGG - chr8_3:42442114-42442133 Msa1288970:intron 35.0%
!!! ACGAGAAAATGTTGTTTTCG+CGG + chr8_3:42442254-42442273 None:intergenic 35.0%
! CTCTGAAAATGTGCTTTAGA+TGG - chr8_3:42442324-42442343 Msa1288970:intron 35.0%
ATAAACGTCCCTTTCTGATT+TGG + chr8_3:42442411-42442430 None:intergenic 35.0%
!! TTCCATTTTTGGGAATCACT+AGG + chr8_3:42442491-42442510 None:intergenic 35.0%
!! CCAAGCTGATTTCCATTTTT+GGG + chr8_3:42442501-42442520 None:intergenic 35.0%
CCAAAAATGGAAATCAGCTT+GGG - chr8_3:42442499-42442518 Msa1288970:intron 35.0%
ATATCTCATTGCCTTACCAT+AGG - chr8_3:42442615-42442634 Msa1288970:CDS 35.0%
! TATAATTGGATGATGGTGTC+AGG - chr8_3:42442645-42442664 Msa1288970:CDS 35.0%
ATTATAGAGAAGGTTGCAGA+GGG - chr8_3:42442712-42442731 Msa1288970:CDS 35.0%
!! GCTTCTAAGACTATGTGCAA+TGG + chr8_3:42433983-42434002 None:intergenic 40.0%
ATGGTAGCTAATCTGTGGTA+GGG + chr8_3:42434145-42434164 None:intergenic 40.0%
AATGGTAGCTAATCTGTGGT+AGG + chr8_3:42434146-42434165 None:intergenic 40.0%
GGTTAATGGTAGCTAATCTG+TGG + chr8_3:42434150-42434169 None:intergenic 40.0%
! GAGAGAGAGTGTGAAGAATT+TGG + chr8_3:42434181-42434200 None:intergenic 40.0%
TCCCATCAACAGAATTGAAC+TGG - chr8_3:42434357-42434376 Msa1288970:exon 40.0%
!!! AGGGCGTTGGATTTTTATAG+TGG - chr8_3:42434499-42434518 Msa1288970:CDS 40.0%
TGAATAGTCACACACAAGTG+GGG - chr8_3:42434630-42434649 Msa1288970:intron 40.0%
! TTTCAGCTTTTGCTAGAGCT+AGG - chr8_3:42434692-42434711 Msa1288970:intron 40.0%
!! ACTTTGGTGTTTGGCATTGA+TGG - chr8_3:42434969-42434988 Msa1288970:intron 40.0%
GAAATATAATCTGCAGGTGG+AGG - chr8_3:42435009-42435028 Msa1288970:intron 40.0%
ATTCTTCATTGGGGAGTTTC+TGG - chr8_3:42435115-42435134 Msa1288970:intron 40.0%
!! GTTTCTGGTGTGGATGATAT+TGG - chr8_3:42435130-42435149 Msa1288970:intron 40.0%
CGCGATTCATCGTAATGAAT+TGG - chr8_3:42435320-42435339 Msa1288970:CDS 40.0%
AATCTTGATTGTGCAGGGAA+TGG - chr8_3:42435456-42435475 Msa1288970:CDS 40.0%
!! ATCCAGGAGGTATCATATCA+CGG + chr8_3:42435493-42435512 None:intergenic 40.0%
AAGAGACTTCAAAGTTCCTC+TGG - chr8_3:42435895-42435914 Msa1288970:CDS 40.0%
TCCGTAAGATAGTTTACCAG+AGG + chr8_3:42435914-42435933 None:intergenic 40.0%
TCTGGTAAACTATCTTACGG+AGG - chr8_3:42435913-42435932 Msa1288970:CDS 40.0%
CAGGGATTTCAAAATCACCT+TGG + chr8_3:42435979-42435998 None:intergenic 40.0%
GCAGAAGCGAAAATAATGCA+GGG + chr8_3:42435997-42436016 None:intergenic 40.0%
TGCAGAAGCGAAAATAATGC+AGG + chr8_3:42435998-42436017 None:intergenic 40.0%
!!! ACTGGTTTTCCTCACTCATA+GGG - chr8_3:42436532-42436551 Msa1288970:intron 40.0%
TGTAGAACTGCCTTTAACCA+AGG - chr8_3:42436674-42436693 Msa1288970:CDS 40.0%
GCGAACTCAATTAAAGGTAG+TGG - chr8_3:42436893-42436912 Msa1288970:intron 40.0%
CGATCTGTTATGTAGCCAAA+AGG - chr8_3:42437303-42437322 Msa1288970:intron 40.0%
GTTATGTAGCCAAAAGGAAG+TGG - chr8_3:42437309-42437328 Msa1288970:intron 40.0%
TAGCCAAAAGGAAGTGGAAA+GGG - chr8_3:42437315-42437334 Msa1288970:intron 40.0%
AAAGATACTGTAGGCTTCAG+CGG + chr8_3:42437667-42437686 None:intergenic 40.0%
TTCGGATTCCAAAACAACCT+CGG + chr8_3:42437733-42437752 None:intergenic 40.0%
!!! GTTCCCGACATTATTTTTGG+AGG + chr8_3:42437768-42437787 None:intergenic 40.0%
! CCTGTTCCCGACATTATTTT+TGG + chr8_3:42437771-42437790 None:intergenic 40.0%
CCAAAAATAATGTCGGGAAC+AGG - chr8_3:42437768-42437787 Msa1288970:CDS 40.0%
GGGTATGAAATTGTATGCCA+AGG - chr8_3:42437795-42437814 Msa1288970:CDS 40.0%
TAGACTCCCAATTAAACCCT+TGG + chr8_3:42437815-42437834 None:intergenic 40.0%
GCTAAAGAACTAGCATCTCT+TGG - chr8_3:42437873-42437892 Msa1288970:intron 40.0%
GTTCAGTGTCCAGGATATAT+CGG + chr8_3:42438148-42438167 None:intergenic 40.0%
TATATCCTGGACACTGAACA+CGG - chr8_3:42438149-42438168 Msa1288970:intron 40.0%
GTTAGGCAAATTGCTTAGAC+CGG - chr8_3:42438238-42438257 Msa1288970:intron 40.0%
GCATGCAACATTCTATCATG+TGG - chr8_3:42438318-42438337 Msa1288970:CDS 40.0%
GTGGTGATTTATAAGGGAGT+AGG - chr8_3:42438337-42438356 Msa1288970:CDS 40.0%
TGGTACCATTGATGAACTGA+AGG - chr8_3:42438430-42438449 Msa1288970:CDS 40.0%
CACATCCTTCAGTTCATCAA+TGG + chr8_3:42438438-42438457 None:intergenic 40.0%
CATTGATGAACTGAAGGATG+TGG - chr8_3:42438436-42438455 Msa1288970:CDS 40.0%
GCTGAGCATCAGAATAAGAA+TGG - chr8_3:42438521-42438540 Msa1288970:intron 40.0%
! AGCTGATGATCCACATTTTC+AGG - chr8_3:42438595-42438614 Msa1288970:intron 40.0%
GGTTGAAGATCCATGGATTT+CGG - chr8_3:42438703-42438722 Msa1288970:intron 40.0%
TTCTTTCTTCTATACAGGGG+AGG - chr8_3:42439087-42439106 Msa1288970:CDS 40.0%
TCTTTCTTCTATACAGGGGA+GGG - chr8_3:42439088-42439107 Msa1288970:CDS 40.0%
TAGTGGAGATAGTTTCCATG+CGG - chr8_3:42439121-42439140 Msa1288970:CDS 40.0%
TGGAGAATTGAGATGGTATC+TGG - chr8_3:42439362-42439381 Msa1288970:CDS 40.0%
GAATTGAGATGGTATCTGGT+AGG - chr8_3:42439366-42439385 Msa1288970:CDS 40.0%
AGAAGCGATTGACAAAGTCT+AGG + chr8_3:42439554-42439573 None:intergenic 40.0%
AGGAAGGTTAGACAGATTCT+GGG + chr8_3:42439593-42439612 None:intergenic 40.0%
AAGGAAGGTTAGACAGATTC+TGG + chr8_3:42439594-42439613 None:intergenic 40.0%
CAGATGTGCATAAGAAAGGA+AGG + chr8_3:42439609-42439628 None:intergenic 40.0%
CTTCCTTTCTTATGCACATC+TGG - chr8_3:42439607-42439626 Msa1288970:intron 40.0%
AATCCCAGATGCTATCTGAT+GGG - chr8_3:42439723-42439742 Msa1288970:intron 40.0%
TTCTCTGAGTGGAGTAGATT+GGG + chr8_3:42439827-42439846 None:intergenic 40.0%
TTTCTCTGAGTGGAGTAGAT+TGG + chr8_3:42439828-42439847 None:intergenic 40.0%
! GAGTTTTCTCTTTCTCTGAG+TGG + chr8_3:42439838-42439857 None:intergenic 40.0%
CTCTCTCGGCTTAATCATAA+TGG - chr8_3:42439885-42439904 Msa1288970:intron 40.0%
GTAGCATAAGCTTCATGTTG+AGG - chr8_3:42439978-42439997 Msa1288970:intron 40.0%
! GACTTTGTCAGAGGATTTTG+GGG - chr8_3:42440158-42440177 Msa1288970:CDS 40.0%
! TCCCACACAAAAGTATGGTT+TGG + chr8_3:42440213-42440232 None:intergenic 40.0%
TACTCTCCCACACAAAAGTA+TGG + chr8_3:42440218-42440237 None:intergenic 40.0%
TCTGTGAGTACTCAACTTGA+CGG - chr8_3:42440374-42440393 Msa1288970:intron 40.0%
! ATTTTACAACTGCCCCGTAT+AGG + chr8_3:42440733-42440752 None:intergenic 40.0%
TAAGTATCCTTAGAGAGGTG+CGG + chr8_3:42440818-42440837 None:intergenic 40.0%
ATAAAAGTAACGGCACGAGA+CGG + chr8_3:42441025-42441044 None:intergenic 40.0%
! TCCTTGCATTTCTTTTCCGT+GGG + chr8_3:42441464-42441483 None:intergenic 40.0%
! ATCCTTGCATTTCTTTTCCG+TGG + chr8_3:42441465-42441484 None:intergenic 40.0%
ATGTGGTCAAAGAACACTGA+CGG + chr8_3:42441517-42441536 None:intergenic 40.0%
CACTTCTCTCTATTCGGAAA+CGG - chr8_3:42441566-42441585 Msa1288970:intron 40.0%
ACCACTTAGTAGCGTTTATG+TGG - chr8_3:42441640-42441659 Msa1288970:intron 40.0%
TCCACATAAACGCTACTAAG+TGG + chr8_3:42441644-42441663 None:intergenic 40.0%
!!! TGTAGCTATGTTTTTGGTGC+TGG - chr8_3:42441758-42441777 Msa1288970:intron 40.0%
!! CATTTTTGGGAATCACTAGG+TGG + chr8_3:42442488-42442507 None:intergenic 40.0%
CACCTAGTGATTCCCAAAAA+TGG - chr8_3:42442486-42442505 Msa1288970:intron 40.0%
CCCAAAAATGGAAATCAGCT+TGG - chr8_3:42442498-42442517 Msa1288970:intron 40.0%
!! CCCAAGCTGATTTCCATTTT+TGG + chr8_3:42442502-42442521 None:intergenic 40.0%
AAATGGAAATCAGCTTGGGA+CGG - chr8_3:42442503-42442522 Msa1288970:intron 40.0%
ACGGAAGAGACTACAAGATT+TGG - chr8_3:42442522-42442541 Msa1288970:intron 40.0%
CGGAAGAGACTACAAGATTT+GGG - chr8_3:42442523-42442542 Msa1288970:intron 40.0%
CATTATAGAGAAGGTTGCAG+AGG - chr8_3:42442711-42442730 Msa1288970:CDS 40.0%
GGTTCATTTCAGCTTAAGTC+TGG - chr8_3:42442733-42442752 Msa1288970:CDS 40.0%
!!! TGGTGATGGTTCCTTTTGCA+AGG + chr8_3:42434056-42434075 None:intergenic 45.0%
TGGTTCAGAGAAAACAGTGG+TGG + chr8_3:42434101-42434120 None:intergenic 45.0%
GAGTGGTTCAGAGAAAACAG+TGG + chr8_3:42434104-42434123 None:intergenic 45.0%
TTGCTAGAGCTAGGACTTTG+TGG - chr8_3:42434701-42434720 Msa1288970:intron 45.0%
ATAGTTGGGTGCAATCTACC+AGG - chr8_3:42435085-42435104 Msa1288970:intron 45.0%
GGTGCAATCTACCAGGAAAT+TGG - chr8_3:42435092-42435111 Msa1288970:intron 45.0%
CTGGTGTGGATGATATTGGA+AGG - chr8_3:42435134-42435153 Msa1288970:intron 45.0%
ATAGCCGGGTCACTAAGTTT+AGG - chr8_3:42435256-42435275 Msa1288970:intron 45.0%
!! TCCAGGAGGTATCATATCAC+GGG + chr8_3:42435492-42435511 None:intergenic 45.0%
TCATCATCATCATCACCGGA+AGG - chr8_3:42435651-42435670 Msa1288970:intron 45.0%
ATCGCTGAAATCTCATCGCT+GGG + chr8_3:42435711-42435730 None:intergenic 45.0%
AATCGCTGAAATCTCATCGC+TGG + chr8_3:42435712-42435731 None:intergenic 45.0%
ACCACCCAAATTGGAATGGA+GGG + chr8_3:42435827-42435846 None:intergenic 45.0%
CAAGACCACCCAAATTGGAA+TGG + chr8_3:42435831-42435850 None:intergenic 45.0%
ATCGACAAGACCACCCAAAT+TGG + chr8_3:42435836-42435855 None:intergenic 45.0%
GGCACTTGGTATCAACACAA+AGG - chr8_3:42435872-42435891 Msa1288970:CDS 45.0%
!! ACAGGCTTTAGTTTGTCCCA+AGG - chr8_3:42435959-42435978 Msa1288970:intron 45.0%
GTTGTGAGGACAAAGCTGAA+AGG + chr8_3:42436478-42436497 None:intergenic 45.0%
!!! CACTGGTTTTCCTCACTCAT+AGG - chr8_3:42436531-42436550 Msa1288970:intron 45.0%
!! CTGGTTTTCCTCACTCATAG+GGG - chr8_3:42436533-42436552 Msa1288970:intron 45.0%
ACTCTATCAGTGTCTCCGTT+AGG - chr8_3:42436712-42436731 Msa1288970:CDS 45.0%
CTCTACAAACTCCCCAATGA+AGG + chr8_3:42436800-42436819 None:intergenic 45.0%
CAAAGAACACGAAGCAATGC+AGG + chr8_3:42437268-42437287 None:intergenic 45.0%
GTAGCCAAAAGGAAGTGGAA+AGG - chr8_3:42437314-42437333 Msa1288970:intron 45.0%
! CTTCCCTTTCCACTTCCTTT+TGG + chr8_3:42437321-42437340 None:intergenic 45.0%
ACTTCCGGTAGCTCAGTTAT+TGG - chr8_3:42437453-42437472 Msa1288970:intron 45.0%
GTTGCCAATAACTGAGCTAC+CGG + chr8_3:42437460-42437479 None:intergenic 45.0%
GTTGTAAAGAGTGAAGAGGC+AGG - chr8_3:42437498-42437517 Msa1288970:intron 45.0%
TTTCTCCGAGGAAGCTATTG+TGG - chr8_3:42437704-42437723 Msa1288970:intron 45.0%
GGATTCCACAATAGCTTCCT+CGG + chr8_3:42437712-42437731 None:intergenic 45.0%
! TGTGGAATCCGAGGTTGTTT+TGG - chr8_3:42437722-42437741 Msa1288970:CDS 45.0%
ATCCCTTGGCATGTATCCTT+CGG + chr8_3:42437943-42437962 None:intergenic 45.0%
ACTGACAGATATGTCGACAC+CGG - chr8_3:42438061-42438080 Msa1288970:intron 45.0%
!! GGATATATCGGTGTCAGACA+GGG + chr8_3:42438136-42438155 None:intergenic 45.0%
!! AGGATATATCGGTGTCAGAC+AGG + chr8_3:42438137-42438156 None:intergenic 45.0%
TGTCTGACACCGATATATCC+TGG - chr8_3:42438136-42438155 Msa1288970:intron 45.0%
ACGGCTTCAATGTGAAGTGT+CGG - chr8_3:42438168-42438187 Msa1288970:intron 45.0%
TATTTGGAGGTCGTCTCAAC+TGG - chr8_3:42438555-42438574 Msa1288970:intron 45.0%
ATTTGGAGGTCGTCTCAACT+GGG - chr8_3:42438556-42438575 Msa1288970:intron 45.0%
AATGTTCTCAGTCACTGGAG+CGG + chr8_3:42438750-42438769 None:intergenic 45.0%
CTTTCTTCTATACAGGGGAG+GGG - chr8_3:42439089-42439108 Msa1288970:CDS 45.0%
TTGAGATGGTATCTGGTAGG+CGG - chr8_3:42439369-42439388 Msa1288970:CDS 45.0%
! GTGAAGTGAAAAGCACAGCA+AGG + chr8_3:42439456-42439475 None:intergenic 45.0%
TGACAAAGTCTAGGAGCTTG+AGG + chr8_3:42439545-42439564 None:intergenic 45.0%
GGAAGGTTAGACAGATTCTG+GGG + chr8_3:42439592-42439611 None:intergenic 45.0%
GAGCCAGATGTGCATAAGAA+AGG + chr8_3:42439613-42439632 None:intergenic 45.0%
TGGCTCATATTCCTTTCACG+TGG - chr8_3:42439627-42439646 Msa1288970:intron 45.0%
! GTTTGATTCGTCCACGTGAA+AGG + chr8_3:42439641-42439660 None:intergenic 45.0%
!! TTCTGAGACAAAGATGGAGC+TGG + chr8_3:42439685-42439704 None:intergenic 45.0%
! CATCAGATAGCATCTGGGAT+TGG + chr8_3:42439724-42439743 None:intergenic 45.0%
CAATCCCAGATGCTATCTGA+TGG - chr8_3:42439722-42439741 Msa1288970:intron 45.0%
GTTCCCATCAGATAGCATCT+GGG + chr8_3:42439729-42439748 None:intergenic 45.0%
!! TTTGTCAGAGGATTTTGGGG+TGG - chr8_3:42440161-42440180 Msa1288970:CDS 45.0%
!! ACTTTTGTGTGGGAGAGTAC+TGG - chr8_3:42440219-42440238 Msa1288970:CDS 45.0%
!!! CTTTTGTGTGGGAGAGTACT+GGG - chr8_3:42440220-42440239 Msa1288970:CDS 45.0%
CACAGAGTGAAGAATCCCTT+TGG + chr8_3:42440360-42440379 None:intergenic 45.0%
TAATCTCGACCCAACTACCA+CGG + chr8_3:42440691-42440710 None:intergenic 45.0%
! TTTGAATTTGGCTCCGTTGC+AGG - chr8_3:42440928-42440947 Msa1288970:intron 45.0%
CATCTTTCCAATGCCTGCAA+CGG + chr8_3:42440944-42440963 None:intergenic 45.0%
!! ATGTGAGTATTGGCGCTTGT+CGG - chr8_3:42440961-42440980 Msa1288970:CDS 45.0%
!! ACACTGGTTCTACACAGGTT+TGG - chr8_3:42441056-42441075 Msa1288970:intron 45.0%
!! ACTCGAGATTCTGATTTGGC+AGG - chr8_3:42441177-42441196 Msa1288970:CDS 45.0%
! CCTTGCATTTCTTTTCCGTG+GGG + chr8_3:42441463-42441482 None:intergenic 45.0%
GCTTATACTCTTACTCACCC+AGG - chr8_3:42441487-42441506 Msa1288970:intron 45.0%
TAGCGGCACTTCTCTCTATT+CGG - chr8_3:42441560-42441579 Msa1288970:intron 45.0%
CTCTCTATTCGGAAACGGAA+CGG - chr8_3:42441571-42441590 Msa1288970:intron 45.0%
TCTCTATTCGGAAACGGAAC+GGG - chr8_3:42441572-42441591 Msa1288970:intron 45.0%
!!! CGGGGCCTAAATTTTTTCCT+TGG - chr8_3:42442085-42442104 Msa1288970:intron 45.0%
GTAGGCCCTAAACATGCATA+TGG + chr8_3:42442122-42442141 None:intergenic 45.0%
CTAGGTGGTTCATAATGACC+AGG + chr8_3:42442473-42442492 None:intergenic 45.0%
AGACTACAAGATTTGGGAGC+TGG - chr8_3:42442529-42442548 Msa1288970:intron 45.0%
!!! AAATTTTACTTTTTTTTTTA+GGG + chr8_3:42437187-42437206 None:intergenic 5.0%
!!! AAAATTTTACTTTTTTTTTT+AGG + chr8_3:42437188-42437207 None:intergenic 5.0%
!! ATTTATATAATTTAAATTCT+AGG - chr8_3:42437961-42437980 Msa1288970:intron 5.0%
!! GAAATTATTATTATTAATAA+AGG + chr8_3:42440770-42440789 None:intergenic 5.0%
ATGATAGGTGGTCGTGGTGA+TGG + chr8_3:42434070-42434089 None:intergenic 50.0%
ATGCTCATGATAGGTGGTCG+TGG + chr8_3:42434076-42434095 None:intergenic 50.0%
GTGGAGATGCTCATGATAGG+TGG + chr8_3:42434082-42434101 None:intergenic 50.0%
! GTGGTGGAGATGCTCATGAT+AGG + chr8_3:42434085-42434104 None:intergenic 50.0%
GGAGAGAGAAACTTATGGGG+TGG + chr8_3:42434256-42434275 None:intergenic 50.0%
TGGGGATCCTATGTTCACAC+TGG - chr8_3:42434648-42434667 Msa1288970:intron 50.0%
GTCGTGACCAGTGTGAACAT+AGG + chr8_3:42434658-42434677 None:intergenic 50.0%
TTCACACTGGTCACGACATC+CGG - chr8_3:42434661-42434680 Msa1288970:intron 50.0%
TAATCTGCAGGTGGAGGGAA+AGG - chr8_3:42435015-42435034 Msa1288970:intron 50.0%
!! TCATTGGGGAGTTTCTGGTG+TGG - chr8_3:42435120-42435139 Msa1288970:intron 50.0%
!! CCAGGAGGTATCATATCACG+GGG + chr8_3:42435491-42435510 None:intergenic 50.0%
TCCCTCCATTCCAATTTGGG+TGG - chr8_3:42435823-42435842 Msa1288970:intron 50.0%
GACCACCCAAATTGGAATGG+AGG + chr8_3:42435828-42435847 None:intergenic 50.0%
TCCTCACTCATAGGGGACTT+AGG - chr8_3:42436540-42436559 Msa1288970:intron 50.0%
CCTCACTCATAGGGGACTTA+GGG - chr8_3:42436541-42436560 Msa1288970:intron 50.0%
! CATCGGTTGCTTCCGAATTC+AGG + chr8_3:42436584-42436603 None:intergenic 50.0%
!! GCTACAGTTTGTGGTGGATG+AGG + chr8_3:42436855-42436874 None:intergenic 50.0%
TACGTCCCTCTCTCAACTTC+CGG - chr8_3:42437438-42437457 Msa1288970:intron 50.0%
AGCTACCGGAAGTTGAGAGA+GGG + chr8_3:42437446-42437465 None:intergenic 50.0%
ATAGCTTCCTCGGAGAAAGC+TGG + chr8_3:42437702-42437721 None:intergenic 50.0%
GGAAGCTATTGTGGAATCCG+AGG - chr8_3:42437713-42437732 Msa1288970:CDS 50.0%
TGGAGGCAACTCAGGTGATT+CGG + chr8_3:42437751-42437770 None:intergenic 50.0%
ATAATGTCGGGAACAGGCAC+AGG - chr8_3:42437774-42437793 Msa1288970:CDS 50.0%
TAATGTCGGGAACAGGCACA+GGG - chr8_3:42437775-42437794 Msa1288970:CDS 50.0%
GAAACAGAGTCTGTAGGTGG+CGG + chr8_3:42437918-42437937 None:intergenic 50.0%
GGTGAAACAGAGTCTGTAGG+TGG + chr8_3:42437921-42437940 None:intergenic 50.0%
TCGGGTGAAACAGAGTCTGT+AGG + chr8_3:42437924-42437943 None:intergenic 50.0%
ACAGACTCTGTTTCACCCGA+AGG - chr8_3:42437924-42437943 Msa1288970:intron 50.0%
ACCCGAAGGATACATGCCAA+GGG - chr8_3:42437938-42437957 Msa1288970:intron 50.0%
TCCCTTGGCATGTATCCTTC+GGG + chr8_3:42437942-42437961 None:intergenic 50.0%
ATGTTCTCAGTCACTGGAGC+GGG + chr8_3:42438749-42438768 None:intergenic 50.0%
! GATCAATGTTTGGAGCCGCA+TGG + chr8_3:42439139-42439158 None:intergenic 50.0%
ACAGAAAGTGGGTGCTCGAA+AGG + chr8_3:42439409-42439428 None:intergenic 50.0%
AAGCACAGCAAGGACAGGAA+AGG + chr8_3:42439446-42439465 None:intergenic 50.0%
! GTGAAAAGCACAGCAAGGAC+AGG + chr8_3:42439451-42439470 None:intergenic 50.0%
! GTTAGACAGATTCTGGGGAC+TGG + chr8_3:42439587-42439606 None:intergenic 50.0%
GGTTCCCATCAGATAGCATC+TGG + chr8_3:42439730-42439749 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCT+CGG - chr8_3:42439855-42439874 Msa1288970:intron 50.0%
ATGAGGCGAGTGAGTTGTGA+TGG + chr8_3:42439934-42439953 None:intergenic 50.0%
TGGAGGCTTGACTTTGTCAG+AGG - chr8_3:42440149-42440168 Msa1288970:CDS 50.0%
ATCAAGATGCACACAGGCAG+AGG - chr8_3:42440279-42440298 Msa1288970:CDS 50.0%
!! GTTGACTGGATTAGTGCTGC+CGG - chr8_3:42440305-42440324 Msa1288970:CDS 50.0%
AAATGCACCTGCAGTACCAC+CGG + chr8_3:42440327-42440346 None:intergenic 50.0%
TCAGCACATCCGTGGTAGTT+GGG - chr8_3:42440679-42440698 Msa1288970:intron 50.0%
AAACTCACCGCACCTCTCTA+AGG - chr8_3:42440808-42440827 Msa1288970:intron 50.0%
GGTCATTGGAGATTTCCCCA+CGG - chr8_3:42441445-42441464 Msa1288970:intron 50.0%
CCCCACGGAAAAGAAATGCA+AGG - chr8_3:42441460-42441479 Msa1288970:intron 50.0%
AGAACACTGACGGAGTTCCT+GGG + chr8_3:42441507-42441526 None:intergenic 50.0%
AAGAACACTGACGGAGTTCC+TGG + chr8_3:42441508-42441527 None:intergenic 50.0%
! GCAGAAGCACAGTGAGTATC+AGG - chr8_3:42441602-42441621 Msa1288970:intron 50.0%
GTTGCTATGAAGATCGGTCC+TGG - chr8_3:42442452-42442471 Msa1288970:intron 50.0%
CTACAAGATTTGGGAGCTGG+AGG - chr8_3:42442532-42442551 Msa1288970:intron 50.0%
! TTGGATGATGGTGTCAGGTG+TGG - chr8_3:42442650-42442669 Msa1288970:CDS 50.0%
!! GGAGGTATCATATCACGGGG+TGG + chr8_3:42435488-42435507 None:intergenic 55.0%
CCCCGTGATATGATACCTCC+TGG - chr8_3:42435488-42435507 Msa1288970:intron 55.0%
!! TTGGGTGGTCTTGTCGATGC+AGG - chr8_3:42435838-42435857 Msa1288970:intron 55.0%
TCGATGCAGGACGAGGAAAC+TGG - chr8_3:42435851-42435870 Msa1288970:CDS 55.0%
AGGACGAGGAAACTGGCACT+TGG - chr8_3:42435858-42435877 Msa1288970:CDS 55.0%
CCCTAAGTCCCCTATGAGTG+AGG + chr8_3:42436544-42436563 None:intergenic 55.0%
ACTCATAGGGGACTTAGGGC+AGG - chr8_3:42436545-42436564 Msa1288970:CDS 55.0%
!! GTTTGTGGTGGATGAGGAGC+AGG + chr8_3:42436849-42436868 None:intergenic 55.0%
GAGCTACCGGAAGTTGAGAG+AGG + chr8_3:42437447-42437466 None:intergenic 55.0%
CTCGGAGAAAGCTGGAACTG+AGG + chr8_3:42437694-42437713 None:intergenic 55.0%
CTCAGTTCCAGCTTTCTCCG+AGG - chr8_3:42437692-42437711 Msa1288970:intron 55.0%
CACCCGAAGGATACATGCCA+AGG - chr8_3:42437937-42437956 Msa1288970:intron 55.0%
TGAAGCCGTGTTCAGTGTCC+AGG + chr8_3:42438157-42438176 None:intergenic 55.0%
TGTTCTCAGTCACTGGAGCG+GGG + chr8_3:42438748-42438767 None:intergenic 55.0%
ATCTGGTAGGCGGTAGCAGT+AGG - chr8_3:42439379-42439398 Msa1288970:CDS 55.0%
TCTGGTAGGCGGTAGCAGTA+GGG - chr8_3:42439380-42439399 Msa1288970:CDS 55.0%
TAGGAGCTTGAGGCAATGCG+TGG + chr8_3:42439535-42439554 None:intergenic 55.0%
GATGGAGCTGGTGAGAGTCA+TGG + chr8_3:42439673-42439692 None:intergenic 55.0%
ACAGGCAGAGGATCGTTGAC+TGG - chr8_3:42440291-42440310 Msa1288970:CDS 55.0%
TCACACAGTCAGCACATCCG+TGG - chr8_3:42440671-42440690 Msa1288970:intron 55.0%
GTCAGCACATCCGTGGTAGT+TGG - chr8_3:42440678-42440697 Msa1288970:intron 55.0%
! TTTGGCTCCGTTGCAGGCAT+TGG - chr8_3:42440934-42440953 Msa1288970:intron 55.0%
!! GGAAAACCCCCCGGTGTTAT+GGG - chr8_3:42440992-42441011 Msa1288970:CDS 55.0%
CCTGTGTAGAACCAGTGTCG+TGG + chr8_3:42441054-42441073 None:intergenic 55.0%
!! CCACGACACTGGTTCTACAC+AGG - chr8_3:42441051-42441070 Msa1288970:intron 55.0%
! GGTCTTGTCGATGCAGGACG+AGG - chr8_3:42435844-42435863 Msa1288970:intron 60.0%
!! TGTGGTGGATGAGGAGCAGG+TGG + chr8_3:42436846-42436865 None:intergenic 60.0%
GAGTGAAGAGGCAGGCGAAG+AGG - chr8_3:42437506-42437525 Msa1288970:intron 60.0%
GTTCTCAGTCACTGGAGCGG+GGG + chr8_3:42438747-42438766 None:intergenic 60.0%
GGGAGGGGCAACAAGAGTAG+TGG - chr8_3:42439104-42439123 Msa1288970:CDS 60.0%
GAGCTTGAGGCAATGCGTGG+AGG + chr8_3:42439532-42439551 None:intergenic 60.0%
!! GACTGGATTAGTGCTGCCGG+TGG - chr8_3:42440308-42440327 Msa1288970:CDS 60.0%
TTGGCGCTTGTCGGATCAGC+AGG - chr8_3:42440970-42440989 Msa1288970:CDS 60.0%
TGGCGCTTGTCGGATCAGCA+GGG - chr8_3:42440971-42440990 Msa1288970:CDS 60.0%
GATCAGCAGGGAAAACCCCC+CGG - chr8_3:42440983-42441002 Msa1288970:CDS 60.0%
! GGGAAAACCCCCCGGTGTTA+TGG - chr8_3:42440991-42441010 Msa1288970:CDS 60.0%
!! AACCCCCCGGTGTTATGGGA+TGG - chr8_3:42440996-42441015 Msa1288970:CDS 60.0%
CACCATCCCATAACACCGGG+GGG + chr8_3:42441001-42441020 None:intergenic 60.0%
CCACCATCCCATAACACCGG+GGG + chr8_3:42441002-42441021 None:intergenic 60.0%
GCCACCATCCCATAACACCG+GGG + chr8_3:42441003-42441022 None:intergenic 60.0%
GGCCACCATCCCATAACACC+GGG + chr8_3:42441004-42441023 None:intergenic 60.0%
CGGCCACCATCCCATAACAC+CGG + chr8_3:42441005-42441024 None:intergenic 60.0%
AGTGCTGCCGGTGGTACTGC+AGG - chr8_3:42440317-42440336 Msa1288970:CDS 65.0%
!! CCCCCGGTGTTATGGGATGG+TGG - chr8_3:42440999-42441018 Msa1288970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 42433973 42442948 42433973 ID=Msa1288970;Name=Msa1288970
chr8_3 mRNA 42433973 42442948 42433973 ID=Msa1288970-mRNA-1;Parent=Msa1288970;Name=Msa1288970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=115|0.91|0.92|1|1|1|13|386|891
chr8_3 exon 42433973 42434523 42433973 ID=Msa1288970-mRNA-1:exon:11616;Parent=Msa1288970-mRNA-1
chr8_3 exon 42435309 42435476 42435309 ID=Msa1288970-mRNA-1:exon:11615;Parent=Msa1288970-mRNA-1
chr8_3 exon 42435849 42435971 42435849 ID=Msa1288970-mRNA-1:exon:11614;Parent=Msa1288970-mRNA-1
chr8_3 exon 42436545 42436794 42436545 ID=Msa1288970-mRNA-1:exon:11613;Parent=Msa1288970-mRNA-1
chr8_3 exon 42437711 42437817 42437711 ID=Msa1288970-mRNA-1:exon:11612;Parent=Msa1288970-mRNA-1
chr8_3 exon 42438305 42438494 42438305 ID=Msa1288970-mRNA-1:exon:11611;Parent=Msa1288970-mRNA-1
chr8_3 exon 42439011 42439603 42439011 ID=Msa1288970-mRNA-1:exon:11610;Parent=Msa1288970-mRNA-1
chr8_3 exon 42440013 42440368 42440013 ID=Msa1288970-mRNA-1:exon:11609;Parent=Msa1288970-mRNA-1
chr8_3 exon 42440941 42441061 42440941 ID=Msa1288970-mRNA-1:exon:11608;Parent=Msa1288970-mRNA-1
chr8_3 exon 42441175 42441300 42441175 ID=Msa1288970-mRNA-1:exon:11607;Parent=Msa1288970-mRNA-1
chr8_3 exon 42441395 42441449 42441395 ID=Msa1288970-mRNA-1:exon:11606;Parent=Msa1288970-mRNA-1
chr8_3 exon 42441766 42441896 42441766 ID=Msa1288970-mRNA-1:exon:11605;Parent=Msa1288970-mRNA-1
chr8_3 exon 42442543 42442948 42442543 ID=Msa1288970-mRNA-1:exon:11604;Parent=Msa1288970-mRNA-1
chr8_3 five_prime_UTR 42442834 42442948 42442834 ID=Msa1288970-mRNA-1:five_prime_utr;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42442543 42442833 42442543 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42441766 42441896 42441766 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42441395 42441449 42441395 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42441175 42441300 42441175 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42440941 42441061 42440941 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42440013 42440368 42440013 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42439011 42439603 42439011 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42438305 42438494 42438305 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42437711 42437817 42437711 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42436545 42436794 42436545 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42435849 42435971 42435849 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42435309 42435476 42435309 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 CDS 42434359 42434523 42434359 ID=Msa1288970-mRNA-1:cds;Parent=Msa1288970-mRNA-1
chr8_3 three_prime_UTR 42433973 42434358 42433973 ID=Msa1288970-mRNA-1:three_prime_utr;Parent=Msa1288970-mRNA-1
Gene Sequence

>Msa1288970

ATGAGCATCTCCACCACTGTTTTCTCTGAACCACTCTTCAATTTCAAACTCTCTCCCTACCACAGATTAGCTACCATTAACCGTTTCAAGCCAAATTCTTCACACTCTCTCTCTTCCACTACCAATATTATTAACTATGGTTCTTCTTGTTCTTGGACATTGAAGCCACCCCATAAGTTTCTCTCTCCAAAATTTGAAACTTTTGCTACAAATACTGATACCCTTCAACAGATTCAATCTTCTGATGATGTCATTTTCAGTCAGACTCATCCCATCAACAGAATTGAACTGGTGGAGGGAAAGGTGTTTATAAGATTAGATCAAGGGAATGATTTGAAGAATTCAGAGCTTATAGTTGGGTGCAATCTACCAGGAAATTGGATTCTTCATTGGGGAGTTTCTGGTGTGGATGATATTGGAAGGGAATGGAATCAACCACCCCGTGATATGATACCTCCTGGATCTATTCCTATAAAGGACTATGCAATAGAGACACCTTTGAAGAAATCATCATCATCATCACCGGAAGGAGATACTCTTTATGAAGTCAGGATCGGTTTTAAGCCCAGCGATGAGATTTCAGCGATTAATTTTGTTCTTAAGGACGAGGAAACTGGCACTTGGTATCAACACAAAGGAAGAGACTTCAAAGTTCCTCTGGTAAACTATCTTACGGAGGATGCTAATTTAATTGGACCTAAAACAGGCTTTAGTTTGTCCCAAGGGGACTTAGGGCAGGTATCTAAAGTTATCCTGAATTCGGAAGCAACCGATGACAAAGTTCAAGATAGCAACAGTGAATCAGAAAATCCAAAAAAGGAAAATAGTCAAGCAGAAGGTTTCAATGTAGAACTGCCTTTAACCAAGGAAGTTACTGTCAATAACTCTATCAGTGTCTCCGTTAGGAAATGCTCAGAAACAGCTAAAAATATTTTGGATTTAGAAACGGATATACCAGGTGATATTTTCCTTCATTGGGGAGTTTGTAGAGATGATTCAAGAAGTTGGGAAGCTCCACCTGCTCCTCATCCACCACAAACTGTAGCATATAAAGACACAGTTTGGCGAACTCAATTAAAGCCAAAAGGAAGTGGAAAGGGAAGTTCAGCACAAATCTCTTTGGGAGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGATAAATGAAAATTCATGGTTAAATAACAAGGGAATTGATTTTTACGTCCCTCTCTCAACTTCCGGTAGCTCAGTTATTGGCAACAGAGAGAATCAATCGAAAGTTGTAAAGAGTGAAGAGGCAGGCGAAGAGGAATCTAACTCTGAATTTACCAATGAAATAATCAATGAAATAAGGCATTTGGTTACTGGCATTTCATCTGTGAAGAGACGAAAAACGAAATCCAAAGAAGCTCAAGAAACCATTCTTCAAGAAATTGAAAGACTGGCCGCTGAAGCCTACAGTATCTTTAGAACCTCAGTTCCAGCTTTCTCCGAGGAAGCTATTGTGGAATCCGAGGTTGTTTTGGAATCCGAATCACCTGAGTTGCCTCCAAAAATAATGTCGGGAACAGGCACAGGGTATGAAATTGTATGCCAAGGGTTTAATTGGGAGTCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTAAAGAACTAGCATCTCTTGGCTTTACTGTTATTTGGTATGGTACCATTGATGAACTGAAGGATGTGGTGAAAGAATTTCATAAAGTTGGAATCAAAGTGCTAGGAGATGCTGTTTTGAATCATCGTTGTGCTGAGCATCAGAATAAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGGAGGGGCAACAAGAGTAGTGGAGATAGTTTCCATGCGGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAACGATATTAAAGAATGGTTATGCTGGTTAAGAGAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACCAAACCATACTTTTGTGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACACAGGCAGAGGATCGTTGACTGGATTAGTGCTGCCGGTGGTACTGCAGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTGCATTGGAAAGATGTGAGTATTGGCGCTTGTCGGATCAGCAGGGAAAACCCCCCGGTGTTATGGGATGGTGGCCGTCTCGTGCCGTTACTTTTATAGAAAACCACGACACTGGTTCTACACAGGGTCATTGGAGATTTCCCCACGGAAAAGAAATGCAAGGATATGCTTATACTCTTACTCACCCAGGAACTCCGTCAGTGTTCTTTGACCACATTTTTTCTCACTATAAAAATGAAATAGCGGCACTTCTCTCTATTCGGAAACGGAACGGGATCAACTGCAGAAGCACAGTTAAAATTACCAAATCAGAAAGGGACGTTTATGCTGCTATCATAGACGAAAAAGTTGCTATGAAGATCGGTCCTGGTCATTATGAACCACCTAGTGATTCCCAAAAATGGAAATCAGCTTGGGACGGAAGAGACTACAAGATTTGGGAGCTGGAGGAATCATAA
Protein sequence

>Msa1288970

MSISTTVFSEPLFNFKLSPYHRLATINRFKPNSSHSLSSTTNIINYGSSCSWTLKPPHKFLSPKFETFATNTDTLQQIQSSDDVIFSQTHPINRIELVEGKVFIRLDQGNDLKNSELIVGCNLPGNWILHWGVSGVDDIGREWNQPPRDMIPPGSIPIKDYAIETPLKKSSSSSPEGDTLYEVRIGFKPSDEISAINFVLKDEETGTWYQHKGRDFKVPLVNYLTEDANLIGPKTGFSLSQGDLGQVSKVILNSEATDDKVQDSNSESENPKKENSQAEGFNVELPLTKEVTVNNSISVSVRKCSETAKNILDLETDIPGDIFLHWGVCRDDSRSWEAPPAPHPPQTVAYKDTVWRTQLKPKGSGKGSSAQISLGEEFSGFLFVLKINENSWLNNKGIDFYVPLSTSGSSVIGNRENQSKVVKSEEAGEEESNSEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIFRTSVPAFSEEAIVESEVVLESESPELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYMELKEKAKELASLGFTVIWYGTIDELKDVVKEFHKVGIKVLGDAVLNHRCAEHQNKNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQDFVRNDIKEWLCWLREEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFCVGEYWDSLSYTYGEMDHNQDAHRQRIVDWISAAGGTAGAFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFPHGKEMQGYAYTLTHPGTPSVFFDHIFSHYKNEIAALLSIRKRNGINCRSTVKITKSERDVYAAIIDEKVAMKIGPGHYEPPSDSQKWKSAWDGRDYKIWELEES*