Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416390 | XP_003600847.1 | 100.000 | 191 | 0 | 0 | 1 | 191 | 1 | 191 | 1.15e-137 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416390 | sp|Q9M047|WLI2B_ARATH | 83.696 | 184 | 28 | 1 | 1 | 184 | 1 | 182 | 7.38e-112 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416390 | B7FME7 | 100.000 | 191 | 0 | 0 | 1 | 191 | 1 | 191 | 5.49e-138 | 392 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0416390 | TF | LIM |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037050 | Msa0416390 | 0.803332 | 3.666753e-49 | -8.615850e-47 |
| Msa0037660 | Msa0416390 | 0.826515 | 2.600747e-54 | -8.615850e-47 |
| Msa0045620 | Msa0416390 | 0.829596 | 4.710776e-55 | -8.615850e-47 |
| Msa0221460 | Msa0416390 | -0.807549 | 4.788534e-50 | -8.615850e-47 |
| Msa0223190 | Msa0416390 | -0.815109 | 1.093868e-51 | -8.615850e-47 |
| Msa0235080 | Msa0416390 | 0.814801 | 1.280258e-51 | -8.615850e-47 |
| Msa0416390 | Msa0462980 | 0.839802 | 1.274129e-57 | -8.615850e-47 |
| Msa0416390 | Msa0508580 | 0.860898 | 1.498020e-63 | -8.615850e-47 |
| Msa0416390 | Msa0547200 | 0.806414 | 8.322605e-50 | -8.615850e-47 |
| Msa0416390 | Msa0618990 | 0.814196 | 1.742411e-51 | -8.615850e-47 |
| Msa0416390 | Msa0623310 | 0.841291 | 5.194207e-58 | -8.615850e-47 |
| Msa0416390 | Msa0668500 | 0.815691 | 8.119672e-52 | -8.615850e-47 |
| Msa0416390 | Msa0681880 | -0.804671 | 1.931632e-49 | -8.615850e-47 |
| Msa0416390 | Msa0704780 | -0.830606 | 2.672177e-55 | -8.615850e-47 |
| Msa0416390 | Msa0732970 | 0.821375 | 4.175024e-53 | -8.615850e-47 |
| Msa0416390 | Msa0773960 | 0.808023 | 3.795618e-50 | -8.615850e-47 |
| Msa0416390 | Msa0846900 | 0.827885 | 1.221724e-54 | -8.615850e-47 |
| Msa0416390 | Msa1025200 | 0.807216 | 5.632440e-50 | -8.615850e-47 |
| Msa0416390 | Msa1025220 | 0.806972 | 6.344883e-50 | -8.615850e-47 |
| Msa0416390 | Msa1026710 | 0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0416390 | Msa1083630 | 0.802442 | 5.598217e-49 | -8.615850e-47 |
| Msa0416390 | Msa1127200 | 0.810633 | 1.046117e-50 | -8.615850e-47 |
| Msa0416390 | Msa1127880 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0416390 | Msa1186670 | 0.840460 | 8.583084e-58 | -8.615850e-47 |
| Msa0416390 | Msa1199580 | -0.839325 | 1.695498e-57 | -8.615850e-47 |
| Msa0416390 | Msa1220580 | 0.835982 | 1.221757e-56 | -8.615850e-47 |
| Msa0416390 | Msa1240060 | 0.853608 | 2.135082e-61 | -8.615850e-47 |
| Msa0416390 | Msa1243630 | -0.803898 | 2.798781e-49 | -8.615850e-47 |
| Msa0416390 | Msa1281370 | 0.858441 | 8.222176e-63 | -8.615850e-47 |
| Msa0416390 | Msa1320530 | 0.838322 | 3.080273e-57 | -8.615850e-47 |
| Msa0416390 | Msa1321490 | 0.807458 | 5.005465e-50 | -8.615850e-47 |
| Msa0416390 | Msa1328630 | -0.827473 | 1.534249e-54 | -8.615850e-47 |
| Msa0416390 | Msa1328720 | -0.835109 | 2.031264e-56 | -8.615850e-47 |
| Msa0416390 | Msa1334560 | 0.830170 | 3.415015e-55 | -8.615850e-47 |
| Msa0416390 | Msa1344680 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa0416390 | Msa1371800 | 0.824661 | 7.151190e-54 | -8.615850e-47 |
| Msa0416390 | Msa1376310 | 0.826088 | 3.287093e-54 | -8.615850e-47 |
| Msa0416390 | Msa1379940 | 0.803824 | 2.898880e-49 | -8.615850e-47 |
| Msa0416390 | Msa1398460 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0416390 | Msa1420830 | 0.815187 | 1.051048e-51 | -8.615850e-47 |
| Msa0416390 | Msa1427180 | -0.820366 | 7.124228e-53 | -8.615850e-47 |
| Msa0416390 | Msa1452790 | -0.829724 | 4.386011e-55 | -8.615850e-47 |
| Msa0416390 | Msa1460970 | 0.828376 | 9.303524e-55 | -8.615850e-47 |
| Msa0244820 | Msa0416390 | -0.816671 | 4.903321e-52 | -8.615850e-47 |
| Msa0264420 | Msa0416390 | -0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa0273360 | Msa0416390 | 0.814414 | 1.559761e-51 | -8.615850e-47 |
| Msa0300670 | Msa0416390 | -0.803299 | 3.724458e-49 | -8.615850e-47 |
| Msa0302310 | Msa0416390 | -0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0337760 | Msa0416390 | -0.808206 | 3.470501e-50 | -8.615850e-47 |
| Msa0339670 | Msa0416390 | -0.815985 | 6.983788e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416390 | MtrunA17_Chr3g0113051 | 100.000 | 191 | 0 | 0 | 1 | 191 | 1 | 191 | 1.06e-141 | 392 |
| Msa0416390 | MtrunA17_Chr7g0247111 | 62.295 | 183 | 65 | 2 | 1 | 183 | 1 | 179 | 3.69e-85 | 250 |
| Msa0416390 | MtrunA17_Chr8g0349391 | 64.246 | 179 | 58 | 2 | 1 | 179 | 1 | 173 | 3.09e-83 | 245 |
| Msa0416390 | MtrunA17_Chr8g0386501 | 59.563 | 183 | 66 | 1 | 1 | 183 | 1 | 175 | 2.26e-75 | 225 |
| Msa0416390 | MtrunA17_Chr1g0152431 | 58.757 | 177 | 69 | 2 | 1 | 175 | 1 | 175 | 2.28e-70 | 212 |
| Msa0416390 | MtrunA17_Chr4g0059371 | 53.591 | 181 | 81 | 2 | 2 | 181 | 3 | 181 | 8.68e-67 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416390 | AT3G55770.3 | 83.696 | 184 | 28 | 1 | 1 | 184 | 1 | 182 | 7.50e-113 | 320 |
| Msa0416390 | AT3G55770.5 | 83.696 | 184 | 28 | 1 | 1 | 184 | 1 | 182 | 7.50e-113 | 320 |
| Msa0416390 | AT3G55770.2 | 83.696 | 184 | 28 | 1 | 1 | 184 | 1 | 182 | 7.50e-113 | 320 |
| Msa0416390 | AT3G55770.1 | 83.696 | 184 | 28 | 1 | 1 | 184 | 1 | 182 | 7.50e-113 | 320 |
| Msa0416390 | AT2G39900.1 | 82.609 | 184 | 29 | 2 | 1 | 183 | 1 | 182 | 5.46e-110 | 313 |
| Msa0416390 | AT2G39900.1 | 45.455 | 88 | 48 | 0 | 103 | 190 | 3 | 90 | 5.89e-22 | 89.0 |
| Msa0416390 | AT3G55770.7 | 70.642 | 218 | 28 | 2 | 1 | 184 | 1 | 216 | 5.53e-105 | 301 |
| Msa0416390 | AT3G55770.7 | 50.000 | 88 | 43 | 1 | 103 | 190 | 3 | 89 | 6.92e-22 | 89.4 |
| Msa0416390 | AT2G45800.1 | 64.706 | 187 | 62 | 2 | 1 | 187 | 1 | 183 | 1.66e-85 | 251 |
| Msa0416390 | AT1G01780.1 | 61.290 | 186 | 66 | 3 | 1 | 186 | 1 | 180 | 6.31e-83 | 244 |
| Msa0416390 | AT1G01780.1 | 49.425 | 87 | 44 | 0 | 3 | 89 | 97 | 183 | 1.79e-23 | 92.8 |
| Msa0416390 | AT3G61230.1 | 59.890 | 182 | 69 | 2 | 2 | 183 | 3 | 180 | 3.72e-80 | 238 |
| Msa0416390 | AT1G10200.1 | 59.322 | 177 | 68 | 2 | 1 | 175 | 1 | 175 | 2.69e-72 | 217 |
| Msa0416390 | AT3G55770.4 | 74.074 | 135 | 32 | 2 | 1 | 135 | 1 | 132 | 4.78e-67 | 202 |
| Msa0416390 | AT3G55770.4 | 50.000 | 88 | 43 | 1 | 103 | 190 | 3 | 89 | 2.93e-23 | 90.5 |
| Msa0416390 | AT3G55770.6 | 72.388 | 134 | 35 | 1 | 1 | 134 | 1 | 132 | 1.06e-64 | 196 |
| Msa0416390 | AT3G55770.6 | 50.000 | 88 | 43 | 1 | 103 | 190 | 3 | 89 | 1.77e-23 | 90.9 |
| Msa0416390 | AT2G45800.2 | 61.688 | 154 | 54 | 3 | 34 | 187 | 4 | 152 | 1.00e-60 | 187 |
| Msa0416390 | AT2G45800.2 | 56.338 | 71 | 31 | 0 | 3 | 73 | 68 | 138 | 2.76e-22 | 89.7 |
| Msa0416390 | AT1G10200.2 | 54.135 | 133 | 57 | 2 | 45 | 175 | 3 | 133 | 9.65e-46 | 148 |
| Msa0416390 | AT1G10200.2 | 52.778 | 72 | 34 | 0 | 3 | 74 | 61 | 132 | 9.92e-21 | 84.3 |
Find 68 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAATACGTTATTAAATA+AGG | 0.190524 | 3_2:+63189596 | None:intergenic |
| TCACTGCAAAGGAACTTTAA+AGG | 0.270879 | 3_2:-63189083 | Msa0416390:intron |
| AGCATCTGAAACAAGCTTTA+TGG | 0.273670 | 3_2:+63189107 | None:intergenic |
| GCATAATTTGATGGAGTTAT+AGG | 0.293254 | 3_2:+63186201 | None:intergenic |
| TGAAAATTACATCATCAAAT+TGG | 0.299512 | 3_2:+63185816 | None:intergenic |
| GGCACCAACATTCAAGATTC+TGG | 0.320266 | 3_2:+63186063 | None:intergenic |
| ACTAAGGAGATGAATATAAA+TGG | 0.322282 | 3_2:+63189540 | None:intergenic |
| GAATTATTACCTTTGTGAAT+TGG | 0.341513 | 3_2:+63189449 | None:intergenic |
| TGTGAATTGGAAGTGATAAA+TGG | 0.344874 | 3_2:+63189462 | None:intergenic |
| TTAATAACGTATTTACATAA+TGG | 0.361443 | 3_2:-63189590 | Msa0416390:five_prime_UTR |
| TTCATCTCCTTAGTCTTAAC+CGG | 0.373802 | 3_2:-63189531 | Msa0416390:five_prime_UTR |
| CTTGAAACATGATTTGTGAT+AGG | 0.385052 | 3_2:+63186242 | None:intergenic |
| GTTGATCAGCTTTCTGCTGA+TGG | 0.412406 | 3_2:-63189139 | Msa0416390:CDS |
| TCAGCAGAAAGCTGATCAAC+GGG | 0.417066 | 3_2:+63189142 | None:intergenic |
| TCAAATTATGCAGCCCTTGA+GGG | 0.436930 | 3_2:-63186189 | Msa0416390:CDS |
| GAACAAAGGCAATAATTAGA+AGG | 0.437664 | 3_2:+63186042 | None:intergenic |
| TCTTGTGTGATTTATTTATC+CGG | 0.437808 | 3_2:-63185887 | Msa0416390:three_prime_UTR |
| TCAAGGGCTGCATAATTTGA+TGG | 0.451254 | 3_2:+63186192 | None:intergenic |
| TGGTGGATCGGTGAAGATAG+AGG | 0.464680 | 3_2:+63189482 | None:intergenic |
| TATCTCTATATAACAGCATT+CGG | 0.473307 | 3_2:+63185781 | None:intergenic |
| ATGCAAGGCTTGTGAGAAAA+CGG | 0.479151 | 3_2:-63189170 | Msa0416390:CDS |
| GCTTAGCAGCTATTCATCAA+TGG | 0.481021 | 3_2:-63187881 | Msa0416390:CDS |
| AGAGTCTCCGGTTAAGACTA+AGG | 0.489264 | 3_2:+63189524 | None:intergenic |
| CAAGCAAGTGTTTGTATGTG+TGG | 0.499680 | 3_2:-63185988 | Msa0416390:three_prime_UTR |
| AACATGCCCGCAGCTTTGCT+AGG | 0.502670 | 3_2:+63187536 | None:intergenic |
| TCAAGCAAATTTACCAGCAC+AGG | 0.506130 | 3_2:+63187652 | None:intergenic |
| ACGTTATTAAATAAGGAAAG+TGG | 0.511573 | 3_2:+63189603 | None:intergenic |
| TGCAATACAAAATGCCCTCA+AGG | 0.513427 | 3_2:+63186175 | None:intergenic |
| ATCAAATTATGCAGCCCTTG+AGG | 0.523435 | 3_2:-63186190 | Msa0416390:CDS |
| GCTGTTATATAGAGATACCT+TGG | 0.528924 | 3_2:-63185775 | Msa0416390:three_prime_UTR |
| GTAGGTAACAGTCGAAAGCC+AGG | 0.532163 | 3_2:-63186265 | Msa0416390:intron |
| CGTTCCAGAATCTTGAATGT+TGG | 0.533855 | 3_2:-63186067 | Msa0416390:exon |
| ACACAAAGTTCAAGAGTCTC+CGG | 0.533991 | 3_2:+63189512 | None:intergenic |
| ACATGCCCGCAGCTTTGCTA+GGG | 0.534302 | 3_2:+63187537 | None:intergenic |
| GAGCAGCTCTTCAAGGAGCA+TGG | 0.538709 | 3_2:-63187829 | Msa0416390:CDS |
| TTGAAGAGCTGCTCAAAATG+AGG | 0.540372 | 3_2:+63187838 | None:intergenic |
| TGGCAAAACTGCTTATCCAC+TGG | 0.542478 | 3_2:-63187483 | Msa0416390:CDS |
| TAATGATGGAACAATTATGA+AGG | 0.552601 | 3_2:+63185955 | None:intergenic |
| GATGTTTACTTATACATGTG+TGG | 0.562737 | 3_2:-63185918 | Msa0416390:three_prime_UTR |
| AGGACCCCTAGCAAAGCTGC+GGG | 0.566248 | 3_2:-63187542 | Msa0416390:CDS |
| ATCAGCAGAAAGCTGATCAA+CGG | 0.568175 | 3_2:+63189141 | None:intergenic |
| AACTGCTTATCCACTGGAGA+AGG | 0.571027 | 3_2:-63187477 | Msa0416390:intron |
| GGTGGATCGGTGAAGATAGA+GGG | 0.571433 | 3_2:+63189483 | None:intergenic |
| TGACGGTACAACTCCTGTGC+TGG | 0.573159 | 3_2:-63187665 | Msa0416390:intron |
| TTCAGATGCTCTCACTGCAA+AGG | 0.579144 | 3_2:-63189094 | Msa0416390:CDS |
| CTTCTTTCAAAACAGAACAA+AGG | 0.583366 | 3_2:+63186028 | None:intergenic |
| ATAACGTATTTACATAATGG+TGG | 0.590385 | 3_2:-63189587 | Msa0416390:five_prime_UTR |
| CATTCAAGATTCTGGAACGG+AGG | 0.593798 | 3_2:+63186071 | None:intergenic |
| TCATGTTTCAAGTGTTCACA+TGG | 0.595518 | 3_2:-63186231 | Msa0416390:CDS |
| GCAATACAAAATGCCCTCAA+GGG | 0.597362 | 3_2:+63186176 | None:intergenic |
| TTAAATCTTACCTTCTCCAG+TGG | 0.598725 | 3_2:+63187467 | None:intergenic |
| TGTCAGTACTGAATGTTCAC+CGG | 0.600445 | 3_2:+63185868 | None:intergenic |
| AAGGACCCCTAGCAAAGCTG+CGG | 0.600940 | 3_2:-63187543 | Msa0416390:CDS |
| GTTATATAGAGATACCTTGG+AGG | 0.608872 | 3_2:-63185772 | Msa0416390:three_prime_UTR |
| GGTGATAACGAGTCATGTCA+TGG | 0.615763 | 3_2:+63189561 | None:intergenic |
| AGCAGCTATTCATCAATGGA+AGG | 0.620240 | 3_2:-63187877 | Msa0416390:CDS |
| GGAAGTGATAAATGGTGGAT+CGG | 0.629183 | 3_2:+63189470 | None:intergenic |
| CAAGAAAAGTGTGCTACATG+TGG | 0.644472 | 3_2:-63187503 | Msa0416390:CDS |
| TTATCACTTCCAATTCACAA+AGG | 0.653877 | 3_2:-63189458 | Msa0416390:intron |
| AACATGATTTGTGATAGGCC+TGG | 0.655676 | 3_2:+63186247 | None:intergenic |
| GAATTGGAAGTGATAAATGG+TGG | 0.668790 | 3_2:+63189465 | None:intergenic |
| CAACATTCAAGATTCTGGAA+CGG | 0.669244 | 3_2:+63186068 | None:intergenic |
| TGTTTCAAGTGTTCACATGG+TGG | 0.677869 | 3_2:-63186228 | Msa0416390:CDS |
| CATGCCCGCAGCTTTGCTAG+GGG | 0.687636 | 3_2:+63187538 | None:intergenic |
| ACAGCTGCAAAGGTAGCTGA+CGG | 0.690921 | 3_2:-63187682 | Msa0416390:intron |
| ACTGAATTTCAAAATGCACA+AGG | 0.735629 | 3_2:+63189251 | None:intergenic |
| GAATTTCAAAATGCACAAGG+TGG | 0.740404 | 3_2:+63189254 | None:intergenic |
| CAGCAGAAAGCTGATCAACG+GGG | 0.750219 | 3_2:+63189143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATGTTTATGATAT+TGG | - | chr3_2:63186318-63186337 | Msa0416390:intron | 10.0% |
| !!! | TTTTTTATGTTTATGATATT+GGG | - | chr3_2:63186319-63186338 | Msa0416390:intron | 10.0% |
| !! | TGTAAATACGTTATTAAATA+AGG | + | chr3_2:63185726-63185745 | None:intergenic | 15.0% |
| !! | TTAATAACGTATTTACATAA+TGG | - | chr3_2:63185729-63185748 | Msa0416390:three_prime_UTR | 15.0% |
| !!! | TTTTTATTGTTCTTTTAATC+CGG | - | chr3_2:63187697-63187716 | Msa0416390:intron | 15.0% |
| !! | ATAGGAATGAAATGAATTAA+TGG | + | chr3_2:63185932-63185951 | None:intergenic | 20.0% |
| !! | TATATTTAGACATATGAAAG+TGG | - | chr3_2:63186469-63186488 | Msa0416390:intron | 20.0% |
| !! | ATATTTAGACATATGAAAGT+GGG | - | chr3_2:63186470-63186489 | Msa0416390:intron | 20.0% |
| !! | ATGCTATAAGTTGTTTATAT+TGG | - | chr3_2:63186711-63186730 | Msa0416390:intron | 20.0% |
| !! | AAACTAAACTTGAAAGATTA+TGG | + | chr3_2:63186880-63186899 | None:intergenic | 20.0% |
| !!! | AAGTTTAGTTTCTCAAATAT+CGG | - | chr3_2:63186889-63186908 | Msa0416390:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTTCACA+AGG | - | chr3_2:63187388-63187407 | Msa0416390:intron | 20.0% |
| !! | AAAATTATTGCCAATTAAAG+AGG | + | chr3_2:63187610-63187629 | None:intergenic | 20.0% |
| !! | AAGGTAAGATTTAAAAATCT+TGG | - | chr3_2:63187861-63187880 | Msa0416390:CDS | 20.0% |
| !! | ACTAAAGATACTTATTCTTA+TGG | + | chr3_2:63187950-63187969 | None:intergenic | 20.0% |
| !!! | CATATTGATGTTAAATGTTT+TGG | + | chr3_2:63188040-63188059 | None:intergenic | 20.0% |
| !! | ATATGACTTCATTATCTTAT+TGG | - | chr3_2:63188285-63188304 | Msa0416390:intron | 20.0% |
| !! | TATGACTTCATTATCTTATT+GGG | - | chr3_2:63188286-63188305 | Msa0416390:intron | 20.0% |
| !!! | CTTCAATTTCATGTTTTTTA+AGG | + | chr3_2:63188389-63188408 | None:intergenic | 20.0% |
| !! | AGTAATTAGATTTACTCATT+CGG | + | chr3_2:63188947-63188966 | None:intergenic | 20.0% |
| !! | AGAAAAATGATAAGTAATGA+TGG | + | chr3_2:63189381-63189400 | None:intergenic | 20.0% |
| !! | TGAAAATTACATCATCAAAT+TGG | + | chr3_2:63189506-63189525 | None:intergenic | 20.0% |
| ! | ACGTTATTAAATAAGGAAAG+TGG | + | chr3_2:63185719-63185738 | None:intergenic | 25.0% |
| ! | ATAACGTATTTACATAATGG+TGG | - | chr3_2:63185732-63185751 | Msa0416390:three_prime_UTR | 25.0% |
| ! | ACTAAGGAGATGAATATAAA+TGG | + | chr3_2:63185782-63185801 | None:intergenic | 25.0% |
| ! | GAATTATTACCTTTGTGAAT+TGG | + | chr3_2:63185873-63185892 | None:intergenic | 25.0% |
| ! | GGGTATTAAAGTATATGAAT+TGG | + | chr3_2:63185895-63185914 | None:intergenic | 25.0% |
| ! | TAATGGTATGAAGTTGAAAT+GGG | + | chr3_2:63185915-63185934 | None:intergenic | 25.0% |
| ! | TTAATGGTATGAAGTTGAAA+TGG | + | chr3_2:63185916-63185935 | None:intergenic | 25.0% |
| ! | AAAGCTAATAAGTAGAGAAT+AGG | + | chr3_2:63185950-63185969 | None:intergenic | 25.0% |
| ! | TTCAGAAAATGGTGAAAAAA+GGG | + | chr3_2:63185984-63186003 | None:intergenic | 25.0% |
| ! | TTTCAGAAAATGGTGAAAAA+AGG | + | chr3_2:63185985-63186004 | None:intergenic | 25.0% |
| ! | ATAGTTTCAGTTTCAGAAAA+TGG | + | chr3_2:63185995-63186014 | None:intergenic | 25.0% |
| ! | AGATTAAAAAAAGCTCTCAT+TGG | + | chr3_2:63186422-63186441 | None:intergenic | 25.0% |
| !!! | GAGCTTTTTTTAATCTAAGT+TGG | - | chr3_2:63186426-63186445 | Msa0416390:intron | 25.0% |
| !! | ATATGAAAGTGGGAATTTTA+TGG | - | chr3_2:63186480-63186499 | Msa0416390:intron | 25.0% |
| !! | TATGAAAGTGGGAATTTTAT+GGG | - | chr3_2:63186481-63186500 | Msa0416390:intron | 25.0% |
| ! | ACGCTTTCAACAATTTAAAT+AGG | + | chr3_2:63186544-63186563 | None:intergenic | 25.0% |
| !! | TTATGAAAATGAGTTGAAAG+AGG | - | chr3_2:63186739-63186758 | Msa0416390:intron | 25.0% |
| ! | AGCTTATACATAAGTGATTA+TGG | + | chr3_2:63186770-63186789 | None:intergenic | 25.0% |
| ! | AAACTTGAAAGATTATGGAT+TGG | + | chr3_2:63186875-63186894 | None:intergenic | 25.0% |
| ! | GAGAATTTATGAAAATGAGT+TGG | - | chr3_2:63186733-63186752 | Msa0416390:intron | 25.0% |
| !! | TAAATTTTGTGAGACTGTTT+GGG | + | chr3_2:63186980-63186999 | None:intergenic | 25.0% |
| !! | ATAAATTTTGTGAGACTGTT+TGG | + | chr3_2:63186981-63187000 | None:intergenic | 25.0% |
| !! | TTGAGTTGTTTATTCAAACA+TGG | - | chr3_2:63187338-63187357 | Msa0416390:intron | 25.0% |
| ! | GGTATTACTGAATAAACTAA+TGG | - | chr3_2:63187732-63187751 | Msa0416390:intron | 25.0% |
| ! | TCAGATATATCTGTTACATA+TGG | - | chr3_2:63187909-63187928 | Msa0416390:intron | 25.0% |
| !!! | AATGTAGGTTTTATCATCTT+TGG | + | chr3_2:63188349-63188368 | None:intergenic | 25.0% |
| !! | ATAACATAAAGCTTTTTGCT+GGG | - | chr3_2:63188506-63188525 | Msa0416390:intron | 25.0% |
| ! | CTATTAATATCTCCAATTAC+AGG | - | chr3_2:63188556-63188575 | Msa0416390:intron | 25.0% |
| !!! | TAAATCTAGTTTTTGATCAC+TGG | - | chr3_2:63188682-63188701 | Msa0416390:intron | 25.0% |
| !!! | AAATCTAGTTTTTGATCACT+GGG | - | chr3_2:63188683-63188702 | Msa0416390:intron | 25.0% |
| !! | ATGTAACATTTTCTCATTTC+AGG | + | chr3_2:63188879-63188898 | None:intergenic | 25.0% |
| ! | GTAATTAGATTTACTCATTC+GGG | + | chr3_2:63188946-63188965 | None:intergenic | 25.0% |
| ! | ATATATCTCATTCTGAATGT+AGG | - | chr3_2:63189036-63189055 | Msa0416390:intron | 25.0% |
| !! | TAATGATGGAACAATTATGA+AGG | + | chr3_2:63189367-63189386 | None:intergenic | 25.0% |
| ! | TCTTGTGTGATTTATTTATC+CGG | - | chr3_2:63189432-63189451 | Msa0416390:intron | 25.0% |
| ! | TATCTCTATATAACAGCATT+CGG | + | chr3_2:63189541-63189560 | None:intergenic | 25.0% |
| TGTGAATTGGAAGTGATAAA+TGG | + | chr3_2:63185860-63185879 | None:intergenic | 30.0% | |
| TTATCACTTCCAATTCACAA+AGG | - | chr3_2:63185861-63185880 | Msa0416390:three_prime_UTR | 30.0% | |
| ACTGAATTTCAAAATGCACA+AGG | + | chr3_2:63186071-63186090 | None:intergenic | 30.0% | |
| !!! | TTGTGCATTTTGAAATTCAG+TGG | - | chr3_2:63186070-63186089 | Msa0416390:exon | 30.0% |
| ! | TCATTGGAATTTTACATGGA+TGG | + | chr3_2:63186406-63186425 | None:intergenic | 30.0% |
| ! | TTAAATTGTTGAAAGCGTGT+TGG | - | chr3_2:63186546-63186565 | Msa0416390:intron | 30.0% |
| !! | TAAGTTTTGTCAGACTGTTT+GGG | + | chr3_2:63186828-63186847 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTCAGACTGTT+TGG | + | chr3_2:63186829-63186848 | None:intergenic | 30.0% |
| GCTTAATTGAGCTTATCTAT+TGG | + | chr3_2:63186853-63186872 | None:intergenic | 30.0% | |
| AACCTAGAAAGATTATGGAT+TGG | + | chr3_2:63187027-63187046 | None:intergenic | 30.0% | |
| AAGCTAACCTAGAAAGATTA+TGG | + | chr3_2:63187032-63187051 | None:intergenic | 30.0% | |
| AAACACATGATTGATTGTCA+TGG | + | chr3_2:63187110-63187129 | None:intergenic | 30.0% | |
| ! | CAATCATGTGTTTGACTTTA+AGG | - | chr3_2:63187117-63187136 | Msa0416390:intron | 30.0% |
| GAATAAACAACTCAACTAAG+TGG | + | chr3_2:63187333-63187352 | None:intergenic | 30.0% | |
| AAAAAGAAGACATACGTGAT+TGG | + | chr3_2:63187540-63187559 | None:intergenic | 30.0% | |
| ! | GTATGTCTTCTTTTTCTTCA+AGG | - | chr3_2:63187545-63187564 | Msa0416390:CDS | 30.0% |
| !!! | TTTATTTTGAACAGCTGCAA+AGG | - | chr3_2:63187627-63187646 | Msa0416390:intron | 30.0% |
| TTCAGTAATACCAAATGTCA+AGG | + | chr3_2:63187724-63187743 | None:intergenic | 30.0% | |
| TTATTACTCTCCTGTACATA+AGG | - | chr3_2:63187969-63187988 | Msa0416390:intron | 30.0% | |
| AATTGTTTCATGCTTGCAAT+GGG | + | chr3_2:63188115-63188134 | None:intergenic | 30.0% | |
| CTACATTATGATTCAGTTCA+CGG | - | chr3_2:63188362-63188381 | Msa0416390:intron | 30.0% | |
| !! | TTTTATGATTTTGTGGGTTG+GGG | + | chr3_2:63188453-63188472 | None:intergenic | 30.0% |
| ! | GTTTTATGATTTTGTGGGTT+GGG | + | chr3_2:63188454-63188473 | None:intergenic | 30.0% |
| !! | GTTCGGTTTTATGATTTTGT+GGG | + | chr3_2:63188459-63188478 | None:intergenic | 30.0% |
| !! | TGTTCGGTTTTATGATTTTG+TGG | + | chr3_2:63188460-63188479 | None:intergenic | 30.0% |
| ! | ACCAGCAAAGATTTCATTTT+GGG | + | chr3_2:63188484-63188503 | None:intergenic | 30.0% |
| ! | TACCAGCAAAGATTTCATTT+TGG | + | chr3_2:63188485-63188504 | None:intergenic | 30.0% |
| ! | CATAACATAAAGCTTTTTGC+TGG | - | chr3_2:63188505-63188524 | Msa0416390:intron | 30.0% |
| ! | GGATAAGTGATAACTAGTTT+AGG | + | chr3_2:63188827-63188846 | None:intergenic | 30.0% |
| ! | TAACATTTTCTCATTTCAGG+CGG | + | chr3_2:63188876-63188895 | None:intergenic | 30.0% |
| ! | TATAAATCTGCAGTTTTGCA+CGG | - | chr3_2:63188966-63188985 | Msa0416390:intron | 30.0% |
| ! | CTTGAAACATGATTTGTGAT+AGG | + | chr3_2:63189080-63189099 | None:intergenic | 30.0% |
| GCATAATTTGATGGAGTTAT+AGG | + | chr3_2:63189121-63189140 | None:intergenic | 30.0% | |
| GAACAAAGGCAATAATTAGA+AGG | + | chr3_2:63189280-63189299 | None:intergenic | 30.0% | |
| CTTCTTTCAAAACAGAACAA+AGG | + | chr3_2:63189294-63189313 | None:intergenic | 30.0% | |
| !!! | TTGTTCTGTTTTGAAAGAAG+AGG | - | chr3_2:63189294-63189313 | Msa0416390:intron | 30.0% |
| !!! | TGTTCTGTTTTGAAAGAAGA+GGG | - | chr3_2:63189295-63189314 | Msa0416390:intron | 30.0% |
| GATGTTTACTTATACATGTG+TGG | - | chr3_2:63189401-63189420 | Msa0416390:intron | 30.0% | |
| !! | TTCATCTCCTTAGTCTTAAC+CGG | - | chr3_2:63185788-63185807 | Msa0416390:three_prime_UTR | 35.0% |
| GAATTGGAAGTGATAAATGG+TGG | + | chr3_2:63185857-63185876 | None:intergenic | 35.0% | |
| GAATTTCAAAATGCACAAGG+TGG | + | chr3_2:63186068-63186087 | None:intergenic | 35.0% | |
| ! | ACAAGCCTTGCATTTTTGTT+GGG | + | chr3_2:63186142-63186161 | None:intergenic | 35.0% |
| ! | AGCATCTGAAACAAGCTTTA+TGG | + | chr3_2:63186215-63186234 | None:intergenic | 35.0% |
| TCACTGCAAAGGAACTTTAA+AGG | - | chr3_2:63186236-63186255 | Msa0416390:CDS | 35.0% | |
| ! | TTGGAATTTTACATGGATGG+TGG | + | chr3_2:63186403-63186422 | None:intergenic | 35.0% |
| ! | GCTCTCATTGGAATTTTACA+TGG | + | chr3_2:63186410-63186429 | None:intergenic | 35.0% |
| AGCCAATCCATAATCTTTCT+AGG | - | chr3_2:63187022-63187041 | Msa0416390:intron | 35.0% | |
| CAATCAGATGCCTCTTTAAT+TGG | - | chr3_2:63187597-63187616 | Msa0416390:intron | 35.0% | |
| TAATACCAAATGTCAAGGAC+CGG | + | chr3_2:63187719-63187738 | None:intergenic | 35.0% | |
| TCTTCTGTTTATTCCAGACA+AGG | - | chr3_2:63187757-63187776 | Msa0416390:intron | 35.0% | |
| TTAAATCTTACCTTCTCCAG+TGG | + | chr3_2:63187855-63187874 | None:intergenic | 35.0% | |
| TAAAATTGCGAGCACAAAGA+AGG | - | chr3_2:63188067-63188086 | Msa0416390:intron | 35.0% | |
| ATTGTTTCATGCTTGCAATG+GGG | + | chr3_2:63188114-63188133 | None:intergenic | 35.0% | |
| CAATTGTTTCATGCTTGCAA+TGG | + | chr3_2:63188116-63188135 | None:intergenic | 35.0% | |
| ATAGCAATGACAGTGTAAGA+GGG | + | chr3_2:63188204-63188223 | None:intergenic | 35.0% | |
| GTCATATCAAAGTCTACTTG+TGG | + | chr3_2:63188272-63188291 | None:intergenic | 35.0% | |
| CGTGAACTGAATCATAATGT+AGG | + | chr3_2:63188364-63188383 | None:intergenic | 35.0% | |
| !! | GGTTTTATGATTTTGTGGGT+TGG | + | chr3_2:63188455-63188474 | None:intergenic | 35.0% |
| !!! | AGATTTCATTTTGGGGTGTT+CGG | + | chr3_2:63188476-63188495 | None:intergenic | 35.0% |
| ! | CCAGCAAAGATTTCATTTTG+GGG | + | chr3_2:63188483-63188502 | None:intergenic | 35.0% |
| ! | ACCTGAAGTGCATATTGATT+AGG | - | chr3_2:63188579-63188598 | Msa0416390:intron | 35.0% |
| TCCTAATCAATATGCACTTC+AGG | + | chr3_2:63188583-63188602 | None:intergenic | 35.0% | |
| ! | TAGTTTTTGATCACTGGGAA+GGG | - | chr3_2:63188688-63188707 | Msa0416390:intron | 35.0% |
| ! | TCTCTAGGAAAACAGTTGTT+TGG | - | chr3_2:63188755-63188774 | Msa0416390:intron | 35.0% |
| TTCGGGCAATTATTGACAAA+TGG | + | chr3_2:63188929-63188948 | None:intergenic | 35.0% | |
| ATATAGCGACAAGAAAACCA+AGG | + | chr3_2:63189010-63189029 | None:intergenic | 35.0% | |
| ! | TCATGTTTCAAGTGTTCACA+TGG | - | chr3_2:63189088-63189107 | Msa0416390:CDS | 35.0% |
| CCTTAAAAAGCTGAGAGAAA+TGG | + | chr3_2:63189174-63189193 | None:intergenic | 35.0% | |
| ! | CCATTTCTCTCAGCTTTTTA+AGG | - | chr3_2:63189171-63189190 | Msa0416390:CDS | 35.0% |
| !! | TCTCAGCTTTTTAAGGAGAA+AGG | - | chr3_2:63189178-63189197 | Msa0416390:CDS | 35.0% |
| !! | CTCAGCTTTTTAAGGAGAAA+GGG | - | chr3_2:63189179-63189198 | Msa0416390:CDS | 35.0% |
| ! | CAACATTCAAGATTCTGGAA+CGG | + | chr3_2:63189254-63189273 | None:intergenic | 35.0% |
| GCTGTTATATAGAGATACCT+TGG | - | chr3_2:63189544-63189563 | Msa0416390:five_prime_UTR | 35.0% | |
| GTTATATAGAGATACCTTGG+AGG | - | chr3_2:63189547-63189566 | Msa0416390:five_prime_UTR | 35.0% | |
| ACACAAAGTTCAAGAGTCTC+CGG | + | chr3_2:63185810-63185829 | None:intergenic | 40.0% | |
| !! | GGAAGTGATAAATGGTGGAT+CGG | + | chr3_2:63185852-63185871 | None:intergenic | 40.0% |
| ! | GCTGCAACGATGTCTTTTAT+TGG | - | chr3_2:63186114-63186133 | Msa0416390:CDS | 40.0% |
| TGGTACCCAACAAAAATGCA+AGG | - | chr3_2:63186134-63186153 | Msa0416390:CDS | 40.0% | |
| ! | CACAAGCCTTGCATTTTTGT+TGG | + | chr3_2:63186143-63186162 | None:intergenic | 40.0% |
| ATGCAAGGCTTGTGAGAAAA+CGG | - | chr3_2:63186149-63186168 | Msa0416390:CDS | 40.0% | |
| ATCAGCAGAAAGCTGATCAA+CGG | + | chr3_2:63186181-63186200 | None:intergenic | 40.0% | |
| !! | TTTTACATGGATGGTGGTGA+AGG | + | chr3_2:63186397-63186416 | None:intergenic | 40.0% |
| ! | TTGTTGAAAGCGTGTTGGAT+CGG | - | chr3_2:63186551-63186570 | Msa0416390:intron | 40.0% |
| GCTTAGCAGCTATTCATCAA+TGG | - | chr3_2:63187438-63187457 | Msa0416390:intron | 40.0% | |
| AGCAGCTATTCATCAATGGA+AGG | - | chr3_2:63187442-63187461 | Msa0416390:intron | 40.0% | |
| TTGAAGAGCTGCTCAAAATG+AGG | + | chr3_2:63187484-63187503 | None:intergenic | 40.0% | |
| ! | TCATTTTGAGCAGCTCTTCA+AGG | - | chr3_2:63187483-63187502 | Msa0416390:CDS | 40.0% |
| TCAAGCAAATTTACCAGCAC+AGG | + | chr3_2:63187670-63187689 | None:intergenic | 40.0% | |
| TTAATCCGGTCCTTGACATT+TGG | - | chr3_2:63187711-63187730 | Msa0416390:intron | 40.0% | |
| ! | CAAGAAAAGTGTGCTACATG+TGG | - | chr3_2:63187816-63187835 | Msa0416390:CDS | 40.0% |
| CTCTAGTCTACCTTATGTAC+AGG | + | chr3_2:63187982-63188001 | None:intergenic | 40.0% | |
| GGCAAAGTTGTACTTCATAC+AGG | + | chr3_2:63188093-63188112 | None:intergenic | 40.0% | |
| ! | TTAGTGCGACCTTTTGCTTT+TGG | - | chr3_2:63188137-63188156 | Msa0416390:intron | 40.0% |
| !! | TAGTGCGACCTTTTGCTTTT+GGG | - | chr3_2:63188138-63188157 | Msa0416390:intron | 40.0% |
| CATAGCAATGACAGTGTAAG+AGG | + | chr3_2:63188205-63188224 | None:intergenic | 40.0% | |
| CCCCAAAATGAAATCTTTGC+TGG | - | chr3_2:63188480-63188499 | Msa0416390:intron | 40.0% | |
| ! | CATAAAGCTTTTTGCTGGGT+TGG | - | chr3_2:63188510-63188529 | Msa0416390:intron | 40.0% |
| !! | TTTGCTGGGTTGGTTTAAAC+TGG | - | chr3_2:63188520-63188539 | Msa0416390:intron | 40.0% |
| !! | CTAGTTTTTGATCACTGGGA+AGG | - | chr3_2:63188687-63188706 | Msa0416390:intron | 40.0% |
| ! | GTTTGGTTCAAGTTAGCGAA+AGG | - | chr3_2:63188772-63188791 | Msa0416390:intron | 40.0% |
| ! | ACGCAGCAGATTCTACATTT+TGG | + | chr3_2:63188906-63188925 | None:intergenic | 40.0% |
| !! | AACCAAGGCATTCTAGTTCA+GGG | + | chr3_2:63188995-63189014 | None:intergenic | 40.0% |
| !! | AAACCAAGGCATTCTAGTTC+AGG | + | chr3_2:63188996-63189015 | None:intergenic | 40.0% |
| ! | AACATGATTTGTGATAGGCC+TGG | + | chr3_2:63189075-63189094 | None:intergenic | 40.0% |
| ! | TGTTTCAAGTGTTCACATGG+TGG | - | chr3_2:63189091-63189110 | Msa0416390:CDS | 40.0% |
| TCAAGGGCTGCATAATTTGA+TGG | + | chr3_2:63189130-63189149 | None:intergenic | 40.0% | |
| ATCAAATTATGCAGCCCTTG+AGG | - | chr3_2:63189129-63189148 | Msa0416390:CDS | 40.0% | |
| TCAAATTATGCAGCCCTTGA+GGG | - | chr3_2:63189130-63189149 | Msa0416390:CDS | 40.0% | |
| GCAATACAAAATGCCCTCAA+GGG | + | chr3_2:63189146-63189165 | None:intergenic | 40.0% | |
| TGCAATACAAAATGCCCTCA+AGG | + | chr3_2:63189147-63189166 | None:intergenic | 40.0% | |
| CGTTCCAGAATCTTGAATGT+TGG | - | chr3_2:63189252-63189271 | Msa0416390:five_prime_UTR | 40.0% | |
| CAAGCAAGTGTTTGTATGTG+TGG | - | chr3_2:63189331-63189350 | Msa0416390:intron | 40.0% | |
| ! | TGTCAGTACTGAATGTTCAC+CGG | + | chr3_2:63189454-63189473 | None:intergenic | 40.0% |
| !!! | GTCTCTTTTTTTTGCCTCCA+AGG | + | chr3_2:63189564-63189583 | None:intergenic | 40.0% |
| ! | GGTGATAACGAGTCATGTCA+TGG | + | chr3_2:63185761-63185780 | None:intergenic | 45.0% |
| AGAGTCTCCGGTTAAGACTA+AGG | + | chr3_2:63185798-63185817 | None:intergenic | 45.0% | |
| TCAGCAGAAAGCTGATCAAC+GGG | + | chr3_2:63186180-63186199 | None:intergenic | 45.0% | |
| GTTGATCAGCTTTCTGCTGA+TGG | - | chr3_2:63186180-63186199 | Msa0416390:CDS | 45.0% | |
| TTCAGATGCTCTCACTGCAA+AGG | - | chr3_2:63186225-63186244 | Msa0416390:CDS | 45.0% | |
| TGCACTAGTGAGTGACTGTA+TGG | - | chr3_2:63186598-63186617 | Msa0416390:intron | 45.0% | |
| TGGCAAAACTGCTTATCCAC+TGG | - | chr3_2:63187836-63187855 | Msa0416390:CDS | 45.0% | |
| AACTGCTTATCCACTGGAGA+AGG | - | chr3_2:63187842-63187861 | Msa0416390:CDS | 45.0% | |
| ! | ACTAGAGTATCCTCCTTCTC+TGG | - | chr3_2:63187995-63188014 | Msa0416390:intron | 45.0% |
| ACATACCATACAGCCAGAGA+AGG | + | chr3_2:63188011-63188030 | None:intergenic | 45.0% | |
| !! | AGTGCGACCTTTTGCTTTTG+GGG | - | chr3_2:63188139-63188158 | Msa0416390:intron | 45.0% |
| TGCACTTCAGGTCCTGTAAT+TGG | + | chr3_2:63188571-63188590 | None:intergenic | 45.0% | |
| CTCTCCAGCCAAATTTGAAC+CGG | - | chr3_2:63188725-63188744 | Msa0416390:intron | 45.0% | |
| TCTCCAGCCAAATTTGAACC+GGG | - | chr3_2:63188726-63188745 | Msa0416390:intron | 45.0% | |
| AACTAGCCCCGGTTCAAATT+TGG | + | chr3_2:63188736-63188755 | None:intergenic | 45.0% | |
| ! | TTTTCCTAGAGAACTAGCCC+CGG | + | chr3_2:63188747-63188766 | None:intergenic | 45.0% |
| TACCCTGAACTAGAATGCCT+TGG | - | chr3_2:63188990-63189009 | Msa0416390:intron | 45.0% | |
| !! | CATTCAAGATTCTGGAACGG+AGG | + | chr3_2:63189251-63189270 | None:intergenic | 45.0% |
| GGCACCAACATTCAAGATTC+TGG | + | chr3_2:63189259-63189278 | None:intergenic | 45.0% | |
| !! | ATAAATTAGTTAATAATATT+TGG | - | chr3_2:63187886-63187905 | Msa0416390:intron | 5.0% |
| GGTGGATCGGTGAAGATAGA+GGG | + | chr3_2:63185839-63185858 | None:intergenic | 50.0% | |
| ! | TGGTGGATCGGTGAAGATAG+AGG | + | chr3_2:63185840-63185859 | None:intergenic | 50.0% |
| CAGCAGAAAGCTGATCAACG+GGG | + | chr3_2:63186179-63186198 | None:intergenic | 50.0% | |
| GGCAGCGTCAATCATAAGCA+AGG | + | chr3_2:63186376-63186395 | None:intergenic | 50.0% | |
| ACAGCTGCAAAGGTAGCTGA+CGG | - | chr3_2:63187637-63187656 | Msa0416390:intron | 50.0% | |
| ! | AAAGCTGCGGGCATGTTTTC+TGG | - | chr3_2:63187789-63187808 | Msa0416390:intron | 50.0% |
| ! | AAGCTGCGGGCATGTTTTCT+GGG | - | chr3_2:63187790-63187809 | Msa0416390:intron | 50.0% |
| ATCCTCCTTCTCTGGCTGTA+TGG | - | chr3_2:63188003-63188022 | Msa0416390:intron | 50.0% | |
| TACCATACAGCCAGAGAAGG+AGG | + | chr3_2:63188008-63188027 | None:intergenic | 50.0% | |
| !! | GTGCGACCTTTTGCTTTTGG+GGG | - | chr3_2:63188140-63188159 | Msa0416390:intron | 50.0% |
| TGAACGCCCCCAAAAGCAAA+AGG | + | chr3_2:63188149-63188168 | None:intergenic | 50.0% | |
| !!! | TTGCTTTTGGGGGCGTTCAT+TGG | - | chr3_2:63188150-63188169 | Msa0416390:intron | 50.0% |
| CTCCAGCCAAATTTGAACCG+GGG | - | chr3_2:63188727-63188746 | Msa0416390:intron | 50.0% | |
| CCTCTTATTGGAGTGCAGAC+TGG | + | chr3_2:63188848-63188867 | None:intergenic | 50.0% | |
| CCAGTCTGCACTCCAATAAG+AGG | - | chr3_2:63188845-63188864 | Msa0416390:intron | 50.0% | |
| GTAGGTAACAGTCGAAAGCC+AGG | - | chr3_2:63189054-63189073 | Msa0416390:intron | 50.0% | |
| GAGCAGCTCTTCAAGGAGCA+TGG | - | chr3_2:63187490-63187509 | Msa0416390:CDS | 55.0% | |
| TGACGGTACAACTCCTGTGC+TGG | - | chr3_2:63187654-63187673 | Msa0416390:intron | 55.0% | |
| CTTTGCTAGGGGTCCTTGTC+TGG | + | chr3_2:63187773-63187792 | None:intergenic | 55.0% | |
| AAGGACCCCTAGCAAAGCTG+CGG | - | chr3_2:63187776-63187795 | Msa0416390:intron | 55.0% | |
| ACATGCCCGCAGCTTTGCTA+GGG | + | chr3_2:63187785-63187804 | None:intergenic | 55.0% | |
| AACATGCCCGCAGCTTTGCT+AGG | + | chr3_2:63187786-63187805 | None:intergenic | 55.0% | |
| AGCCCCGGTTCAAATTTGGC+TGG | + | chr3_2:63188732-63188751 | None:intergenic | 55.0% | |
| !! | TGAACCGGGGCTAGTTCTCT+AGG | - | chr3_2:63188740-63188759 | Msa0416390:intron | 55.0% |
| CAGGCGGTCTAGCCTCTTAT+TGG | + | chr3_2:63188860-63188879 | None:intergenic | 55.0% | |
| AGGACCCCTAGCAAAGCTGC+GGG | - | chr3_2:63187777-63187796 | Msa0416390:intron | 60.0% | |
| CATGCCCGCAGCTTTGCTAG+GGG | + | chr3_2:63187784-63187803 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63185705 | 63189636 | 63185705 | ID=Msa0416390;Name=Msa0416390 |
| chr3_2 | mRNA | 63185705 | 63189636 | 63185705 | ID=Msa0416390-mRNA-1;Parent=Msa0416390;Name=Msa0416390-mRNA-1;_AED=0.11;_eAED=0.11;_QI=266|1|1|1|0.8|0.66|6|369|191 |
| chr3_2 | exon | 63185705 | 63186283 | 63185705 | ID=Msa0416390-mRNA-1:exon:13688;Parent=Msa0416390-mRNA-1 |
| chr3_2 | exon | 63187478 | 63187567 | 63187478 | ID=Msa0416390-mRNA-1:exon:13687;Parent=Msa0416390-mRNA-1 |
| chr3_2 | exon | 63187666 | 63187700 | 63187666 | ID=Msa0416390-mRNA-1:exon:13686;Parent=Msa0416390-mRNA-1 |
| chr3_2 | exon | 63187797 | 63187902 | 63187797 | ID=Msa0416390-mRNA-1:exon:13685;Parent=Msa0416390-mRNA-1 |
| chr3_2 | exon | 63189084 | 63189306 | 63189084 | ID=Msa0416390-mRNA-1:exon:13684;Parent=Msa0416390-mRNA-1 |
| chr3_2 | exon | 63189459 | 63189636 | 63189459 | ID=Msa0416390-mRNA-1:exon:13683;Parent=Msa0416390-mRNA-1 |
| chr3_2 | five_prime_UTR | 63189459 | 63189636 | 63189459 | ID=Msa0416390-mRNA-1:five_prime_utr;Parent=Msa0416390-mRNA-1 |
| chr3_2 | five_prime_UTR | 63189219 | 63189306 | 63189219 | ID=Msa0416390-mRNA-1:five_prime_utr;Parent=Msa0416390-mRNA-1 |
| chr3_2 | CDS | 63189084 | 63189218 | 63189084 | ID=Msa0416390-mRNA-1:cds;Parent=Msa0416390-mRNA-1 |
| chr3_2 | CDS | 63187797 | 63187902 | 63187797 | ID=Msa0416390-mRNA-1:cds;Parent=Msa0416390-mRNA-1 |
| chr3_2 | CDS | 63187666 | 63187700 | 63187666 | ID=Msa0416390-mRNA-1:cds;Parent=Msa0416390-mRNA-1 |
| chr3_2 | CDS | 63187478 | 63187567 | 63187478 | ID=Msa0416390-mRNA-1:cds;Parent=Msa0416390-mRNA-1 |
| chr3_2 | CDS | 63186074 | 63186283 | 63186074 | ID=Msa0416390-mRNA-1:cds;Parent=Msa0416390-mRNA-1 |
| chr3_2 | three_prime_UTR | 63185705 | 63186073 | 63185705 | ID=Msa0416390-mRNA-1:three_prime_utr;Parent=Msa0416390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
