Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264420 | AES67610.1 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264420 | G7IHP7 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016440 | Msa0264420 | -0.803738 | 3.021271e-49 | -8.615850e-47 |
| Msa0021980 | Msa0264420 | 0.849055 | 4.132004e-60 | -8.615850e-47 |
| Msa0041780 | Msa0264420 | 0.834390 | 3.081145e-56 | -8.615850e-47 |
| Msa0045620 | Msa0264420 | -0.816331 | 5.843261e-52 | -8.615850e-47 |
| Msa0050320 | Msa0264420 | 0.809324 | 2.001872e-50 | -8.615850e-47 |
| Msa0085580 | Msa0264420 | 0.821718 | 3.479507e-53 | -8.615850e-47 |
| Msa0091090 | Msa0264420 | 0.826438 | 2.712748e-54 | -8.615850e-47 |
| Msa0096570 | Msa0264420 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0117300 | Msa0264420 | 0.830003 | 3.749967e-55 | -8.615850e-47 |
| Msa0154720 | Msa0264420 | 0.808556 | 2.922759e-50 | -8.615850e-47 |
| Msa0160650 | Msa0264420 | 0.847337 | 1.232798e-59 | -8.615850e-47 |
| Msa0183200 | Msa0264420 | 0.819202 | 1.314172e-52 | -8.615850e-47 |
| Msa0188500 | Msa0264420 | 0.883871 | 3.109399e-71 | -8.615850e-47 |
| Msa0200840 | Msa0264420 | 0.815294 | 9.952598e-52 | -8.615850e-47 |
| Msa0200870 | Msa0264420 | 0.827191 | 1.792862e-54 | -8.615850e-47 |
| Msa0216550 | Msa0264420 | 0.814982 | 1.167096e-51 | -8.615850e-47 |
| Msa0223190 | Msa0264420 | 0.989354 | 9.227225e-178 | -8.615850e-47 |
| Msa0225880 | Msa0264420 | 0.845206 | 4.691465e-59 | -8.615850e-47 |
| Msa0229750 | Msa0264420 | 0.801060 | 1.075973e-48 | -8.615850e-47 |
| Msa0230980 | Msa0264420 | 0.857956 | 1.146205e-62 | -8.615850e-47 |
| Msa0243470 | Msa0264420 | 0.816840 | 4.494215e-52 | -8.615850e-47 |
| Msa0243820 | Msa0264420 | 0.830595 | 2.687396e-55 | -8.615850e-47 |
| Msa0256410 | Msa0264420 | 0.824865 | 6.402635e-54 | -8.615850e-47 |
| Msa0260470 | Msa0264420 | 0.844271 | 8.384818e-59 | -8.615850e-47 |
| Msa0264240 | Msa0264420 | 0.839765 | 1.302884e-57 | -8.615850e-47 |
| Msa0264420 | Msa0270460 | 0.860746 | 1.666442e-63 | -8.615850e-47 |
| Msa0264420 | Msa0274950 | -0.812271 | 4.609954e-51 | -8.615850e-47 |
| Msa0264420 | Msa0281940 | 0.803494 | 3.393913e-49 | -8.615850e-47 |
| Msa0264420 | Msa0282500 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0264420 | Msa0295850 | 0.812090 | 5.049078e-51 | -8.615850e-47 |
| Msa0264420 | Msa0298270 | -0.801529 | 8.626599e-49 | -8.615850e-47 |
| Msa0264420 | Msa0302310 | 0.988631 | 8.805042e-175 | -8.615850e-47 |
| Msa0264420 | Msa0304110 | 0.837379 | 5.382176e-57 | -8.615850e-47 |
| Msa0264420 | Msa0309060 | 0.841007 | 6.166984e-58 | -8.615850e-47 |
| Msa0264420 | Msa0338680 | -0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0264420 | Msa0339560 | 0.856043 | 4.200972e-62 | -8.615850e-47 |
| Msa0264420 | Msa0339670 | 0.996246 | 3.905300e-225 | -8.615850e-47 |
| Msa0264420 | Msa0341190 | 0.826555 | 2.543833e-54 | -8.615850e-47 |
| Msa0264420 | Msa0352640 | 0.836578 | 8.620779e-57 | -8.615850e-47 |
| Msa0264420 | Msa0364010 | 0.837591 | 4.747832e-57 | -8.615850e-47 |
| Msa0264420 | Msa0372990 | 0.823248 | 1.534163e-53 | -8.615850e-47 |
| Msa0264420 | Msa0378670 | 0.829506 | 4.955250e-55 | -8.615850e-47 |
| Msa0264420 | Msa0378700 | 0.829884 | 4.009751e-55 | -8.615850e-47 |
| Msa0264420 | Msa0379500 | 0.814754 | 1.311667e-51 | -8.615850e-47 |
| Msa0264420 | Msa0401570 | 0.803721 | 3.045008e-49 | -8.615850e-47 |
| Msa0264420 | Msa0403720 | 0.845657 | 3.543280e-59 | -8.615850e-47 |
| Msa0264420 | Msa0404180 | 0.818792 | 1.629589e-52 | -8.615850e-47 |
| Msa0264420 | Msa0408160 | 0.820773 | 5.744838e-53 | -8.615850e-47 |
| Msa0264420 | Msa0416390 | -0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa0264420 | Msa0421390 | 0.844530 | 7.139342e-59 | -8.615850e-47 |
| Msa0264420 | Msa0428330 | 0.819803 | 9.585568e-53 | -8.615850e-47 |
| Msa0264420 | Msa0431940 | 0.835743 | 1.404900e-56 | -8.615850e-47 |
| Msa0264420 | Msa0436600 | 0.827460 | 1.545685e-54 | -8.615850e-47 |
| Msa0264420 | Msa0436610 | 0.807283 | 5.453002e-50 | -8.615850e-47 |
| Msa0264420 | Msa0448400 | 0.837874 | 4.017733e-57 | -8.615850e-47 |
| Msa0264420 | Msa0456480 | 0.823038 | 1.717417e-53 | -8.615850e-47 |
| Msa0264420 | Msa0462980 | -0.827958 | 1.173275e-54 | -8.615850e-47 |
| Msa0264420 | Msa0481050 | 0.800802 | 1.214913e-48 | -8.615850e-47 |
| Msa0264420 | Msa0496460 | 0.868328 | 7.087541e-66 | -8.615850e-47 |
| Msa0264420 | Msa0496470 | 0.854542 | 1.148841e-61 | -8.615850e-47 |
| Msa0264420 | Msa0496570 | 0.860878 | 1.519286e-63 | -8.615850e-47 |
| Msa0264420 | Msa0500490 | 0.812588 | 3.931679e-51 | -8.615850e-47 |
| Msa0264420 | Msa0508580 | -0.830828 | 2.356419e-55 | -8.615850e-47 |
| Msa0264420 | Msa0520810 | 0.844164 | 8.958553e-59 | -8.615850e-47 |
| Msa0264420 | Msa0521940 | -0.823415 | 1.402111e-53 | -8.615850e-47 |
| Msa0264420 | Msa0545230 | 0.803584 | 3.251390e-49 | -8.615850e-47 |
| Msa0264420 | Msa0546370 | 0.865302 | 6.515326e-65 | -8.615850e-47 |
| Msa0264420 | Msa0547200 | -0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0264420 | Msa0549330 | 0.819831 | 9.445530e-53 | -8.615850e-47 |
| Msa0264420 | Msa0555510 | 0.809734 | 1.634592e-50 | -8.615850e-47 |
| Msa0264420 | Msa0560370 | 0.829443 | 5.132186e-55 | -8.615850e-47 |
| Msa0264420 | Msa0580540 | 0.815389 | 9.477859e-52 | -8.615850e-47 |
| Msa0264420 | Msa0601920 | -0.824810 | 6.598454e-54 | -8.615850e-47 |
| Msa0264420 | Msa0604640 | 0.834365 | 3.126325e-56 | -8.615850e-47 |
| Msa0264420 | Msa0608940 | 0.816041 | 6.783245e-52 | -8.615850e-47 |
| Msa0264420 | Msa0621780 | 0.807847 | 4.137740e-50 | -8.615850e-47 |
| Msa0264420 | Msa0623310 | -0.812260 | 4.637594e-51 | -8.615850e-47 |
| Msa0264420 | Msa0623360 | 0.848509 | 5.859280e-60 | -8.615850e-47 |
| Msa0264420 | Msa0630850 | 0.860112 | 2.591545e-63 | -8.615850e-47 |
| Msa0264420 | Msa0643020 | -0.828871 | 7.063674e-55 | -8.615850e-47 |
| Msa0264420 | Msa0648200 | 0.809043 | 2.299273e-50 | -8.615850e-47 |
| Msa0264420 | Msa0649530 | 0.802384 | 5.756618e-49 | -8.615850e-47 |
| Msa0264420 | Msa0655610 | 0.804219 | 2.399788e-49 | -8.615850e-47 |
| Msa0264420 | Msa0659020 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
| Msa0264420 | Msa0681880 | 0.857019 | 2.170495e-62 | -8.615850e-47 |
| Msa0264420 | Msa0682730 | -0.814832 | 1.260190e-51 | -8.615850e-47 |
| Msa0264420 | Msa0691740 | 0.801838 | 7.452921e-49 | -8.615850e-47 |
| Msa0264420 | Msa0697600 | 0.816998 | 4.140558e-52 | -8.615850e-47 |
| Msa0264420 | Msa0702310 | 0.814057 | 1.869996e-51 | -8.615850e-47 |
| Msa0264420 | Msa0702620 | 0.806177 | 9.337392e-50 | -8.615850e-47 |
| Msa0264420 | Msa0704780 | 0.872033 | 4.338951e-67 | -8.615850e-47 |
| Msa0264420 | Msa0705050 | 0.843704 | 1.189660e-58 | -8.615850e-47 |
| Msa0264420 | Msa0705130 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
| Msa0264420 | Msa0714060 | 0.825413 | 4.752273e-54 | -8.615850e-47 |
| Msa0264420 | Msa0714200 | 0.824348 | 8.476639e-54 | -8.615850e-47 |
| Msa0264420 | Msa0715510 | -0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0264420 | Msa0756440 | 0.849827 | 2.517682e-60 | -8.615850e-47 |
| Msa0264420 | Msa0775420 | 0.835259 | 1.862654e-56 | -8.615850e-47 |
| Msa0264420 | Msa0795710 | 0.808247 | 3.402199e-50 | -8.615850e-47 |
| Msa0264420 | Msa0796460 | 0.813980 | 1.944488e-51 | -8.615850e-47 |
| Msa0264420 | Msa0796610 | 0.807144 | 5.833122e-50 | -8.615850e-47 |
| Msa0264420 | Msa0807980 | 0.817331 | 3.486554e-52 | -8.615850e-47 |
| Msa0264420 | Msa0812800 | 0.826743 | 2.294484e-54 | -8.615850e-47 |
| Msa0264420 | Msa0813630 | 0.816968 | 4.205673e-52 | -8.615850e-47 |
| Msa0264420 | Msa0815950 | 0.809219 | 2.108556e-50 | -8.615850e-47 |
| Msa0264420 | Msa0834160 | 0.801082 | 1.065006e-48 | -8.615850e-47 |
| Msa0264420 | Msa0834200 | 0.828810 | 7.310813e-55 | -8.615850e-47 |
| Msa0264420 | Msa0834240 | 0.835378 | 1.737980e-56 | -8.615850e-47 |
| Msa0264420 | Msa0835550 | 0.862350 | 5.392786e-64 | -8.615850e-47 |
| Msa0264420 | Msa0846300 | 0.816719 | 4.784297e-52 | -8.615850e-47 |
| Msa0264420 | Msa0853150 | 0.803086 | 4.123536e-49 | -8.615850e-47 |
| Msa0264420 | Msa0861480 | 0.830245 | 3.272965e-55 | -8.615850e-47 |
| Msa0264420 | Msa0861560 | 0.837642 | 4.607697e-57 | -8.615850e-47 |
| Msa0264420 | Msa0871310 | 0.830215 | 3.328824e-55 | -8.615850e-47 |
| Msa0264420 | Msa0899730 | 0.811503 | 6.775685e-51 | -8.615850e-47 |
| Msa0264420 | Msa0927890 | 0.808939 | 2.420558e-50 | -8.615850e-47 |
| Msa0264420 | Msa0967250 | 0.801829 | 7.487136e-49 | -8.615850e-47 |
| Msa0264420 | Msa0975560 | 0.841362 | 4.976454e-58 | -8.615850e-47 |
| Msa0264420 | Msa0986560 | 0.833037 | 6.711559e-56 | -8.615850e-47 |
| Msa0264420 | Msa0995220 | 0.808087 | 3.679821e-50 | -8.615850e-47 |
| Msa0264420 | Msa0995660 | 0.804044 | 2.608956e-49 | -8.615850e-47 |
| Msa0264420 | Msa0998940 | 0.803761 | 2.988113e-49 | -8.615850e-47 |
| Msa0264420 | Msa0999590 | 0.852392 | 4.758834e-61 | -8.615850e-47 |
| Msa0264420 | Msa1026710 | -0.800197 | 1.613393e-48 | -8.615850e-47 |
| Msa0264420 | Msa1031530 | 0.812014 | 5.245801e-51 | -8.615850e-47 |
| Msa0264420 | Msa1035040 | -0.807196 | 5.688198e-50 | -8.615850e-47 |
| Msa0264420 | Msa1038110 | 0.854932 | 8.853178e-62 | -8.615850e-47 |
| Msa0264420 | Msa1040730 | -0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0264420 | Msa1041550 | 0.803526 | 3.342630e-49 | -8.615850e-47 |
| Msa0264420 | Msa1052030 | 0.808809 | 2.579937e-50 | -8.615850e-47 |
| Msa0264420 | Msa1071310 | 0.834034 | 3.785045e-56 | -8.615850e-47 |
| Msa0264420 | Msa1081530 | 0.809649 | 1.704507e-50 | -8.615850e-47 |
| Msa0264420 | Msa1101300 | 0.806209 | 9.193243e-50 | -8.615850e-47 |
| Msa0264420 | Msa1101610 | 0.807756 | 4.325815e-50 | -8.615850e-47 |
| Msa0264420 | Msa1129660 | 0.839567 | 1.467194e-57 | -8.615850e-47 |
| Msa0264420 | Msa1188820 | 0.815745 | 7.896723e-52 | -8.615850e-47 |
| Msa0264420 | Msa1194170 | -0.806584 | 7.662881e-50 | -8.615850e-47 |
| Msa0264420 | Msa1199580 | 0.842539 | 2.431257e-58 | -8.615850e-47 |
| Msa0264420 | Msa1211260 | 0.811021 | 8.622028e-51 | -8.615850e-47 |
| Msa0264420 | Msa1211300 | 0.801833 | 7.472498e-49 | -8.615850e-47 |
| Msa0264420 | Msa1211390 | 0.815946 | 7.124365e-52 | -8.615850e-47 |
| Msa0264420 | Msa1216700 | 0.806169 | 9.374530e-50 | -8.615850e-47 |
| Msa0264420 | Msa1223510 | 0.812608 | 3.891034e-51 | -8.615850e-47 |
| Msa0264420 | Msa1229770 | 0.815059 | 1.122077e-51 | -8.615850e-47 |
| Msa0264420 | Msa1237260 | 0.825920 | 3.602446e-54 | -8.615850e-47 |
| Msa0264420 | Msa1240060 | -0.867971 | 9.230868e-66 | -8.615850e-47 |
| Msa0264420 | Msa1242990 | 0.835132 | 2.004936e-56 | -8.615850e-47 |
| Msa0264420 | Msa1243630 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0264420 | Msa1263610 | 0.844862 | 5.810308e-59 | -8.615850e-47 |
| Msa0264420 | Msa1264140 | 0.821272 | 4.410467e-53 | -8.615850e-47 |
| Msa0264420 | Msa1266720 | 0.835962 | 1.236223e-56 | -8.615850e-47 |
| Msa0264420 | Msa1281370 | -0.856074 | 4.112428e-62 | -8.615850e-47 |
| Msa0264420 | Msa1282210 | 0.806664 | 7.370423e-50 | -8.615850e-47 |
| Msa0264420 | Msa1302780 | 0.816851 | 4.468418e-52 | -8.615850e-47 |
| Msa0264420 | Msa1306700 | 0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0264420 | Msa1320530 | -0.876508 | 1.321012e-68 | -8.615850e-47 |
| Msa0264420 | Msa1323920 | 0.821633 | 3.640596e-53 | -8.615850e-47 |
| Msa0264420 | Msa1328630 | 0.843864 | 1.077969e-58 | -8.615850e-47 |
| Msa0264420 | Msa1328720 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa0264420 | Msa1329660 | 0.802002 | 6.896557e-49 | -8.615850e-47 |
| Msa0264420 | Msa1342400 | 0.856299 | 3.534862e-62 | -8.615850e-47 |
| Msa0264420 | Msa1343480 | 0.811017 | 8.638293e-51 | -8.615850e-47 |
| Msa0264420 | Msa1347610 | -0.809387 | 1.939986e-50 | -8.615850e-47 |
| Msa0264420 | Msa1353280 | 0.819391 | 1.190147e-52 | -8.615850e-47 |
| Msa0264420 | Msa1357720 | 0.810650 | 1.037106e-50 | -8.615850e-47 |
| Msa0264420 | Msa1368660 | 0.833975 | 3.916436e-56 | -8.615850e-47 |
| Msa0264420 | Msa1370630 | 0.831403 | 1.702891e-55 | -8.615850e-47 |
| Msa0264420 | Msa1370930 | -0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa0264420 | Msa1371800 | -0.817588 | 3.050649e-52 | -8.615850e-47 |
| Msa0264420 | Msa1376310 | -0.817586 | 3.053924e-52 | -8.615850e-47 |
| Msa0264420 | Msa1388070 | 0.801341 | 9.425120e-49 | -8.615850e-47 |
| Msa0264420 | Msa1388270 | 0.825941 | 3.562584e-54 | -8.615850e-47 |
| Msa0264420 | Msa1401000 | 0.843931 | 1.034484e-58 | -8.615850e-47 |
| Msa0264420 | Msa1403950 | 0.808750 | 2.656016e-50 | -8.615850e-47 |
| Msa0264420 | Msa1407200 | 0.831992 | 1.218581e-55 | -8.615850e-47 |
| Msa0264420 | Msa1409050 | 0.832250 | 1.052000e-55 | -8.615850e-47 |
| Msa0264420 | Msa1409760 | 0.834053 | 3.744036e-56 | -8.615850e-47 |
| Msa0264420 | Msa1413900 | 0.811498 | 6.795194e-51 | -8.615850e-47 |
| Msa0264420 | Msa1427180 | 0.992058 | 4.611730e-191 | -8.615850e-47 |
| Msa0264420 | Msa1428560 | 0.825714 | 4.032502e-54 | -8.615850e-47 |
| Msa0264420 | Msa1431180 | 0.808202 | 3.476940e-50 | -8.615850e-47 |
| Msa0264420 | Msa1446220 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
| Msa0264420 | Msa1450630 | 0.815687 | 8.135427e-52 | -8.615850e-47 |
| Msa0264420 | Msa1452200 | 0.844258 | 8.450384e-59 | -8.615850e-47 |
| Msa0264420 | Msa1452790 | 0.801761 | 7.728570e-49 | -8.615850e-47 |
| Msa0264420 | Msa1459630 | 0.827140 | 1.843938e-54 | -8.615850e-47 |
| Msa0264420 | Msa1460970 | -0.829637 | 4.604853e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264420 | MtrunA17_Chr2g0328301 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Msa0264420 | MtrunA17_Chr4g0031681 | 46.667 | 210 | 47 | 5 | 96 | 286 | 261 | 424 | 3.45e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264420 | AT5G59400.1 | 57.931 | 290 | 111 | 4 | 7 | 285 | 6 | 295 | 7.72e-117 | 338 |
| Msa0264420 | AT5G59400.2 | 54.237 | 236 | 97 | 4 | 7 | 231 | 6 | 241 | 1.14e-81 | 247 |
Find 81 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACGGTTGTTTCTGATTT+TGG | 0.096153 | 2_2:-64376298 | None:intergenic |
| TATCAAAATGCATTTAATTT+AGG | 0.174239 | 2_2:+64377494 | Msa0264420:CDS |
| TTTGGTAGACAATGGGTTTA+TGG | 0.211478 | 2_2:+64378715 | Msa0264420:CDS |
| ACACATGGCACTTTGCTCTA+TGG | 0.252132 | 2_2:-64378193 | None:intergenic |
| CTAACCTCTTCTCCACAATT+TGG | 0.256151 | 2_2:-64377789 | None:intergenic |
| CCATGTGTGTGAATGCTTAT+TGG | 0.266944 | 2_2:+64378208 | Msa0264420:CDS |
| AAAGAGCTTCAAGGGTTTCT+TGG | 0.284671 | 2_2:-64376416 | None:intergenic |
| CAGCAATCAACTTCAAGATT+TGG | 0.317400 | 2_2:+64378697 | Msa0264420:intron |
| TAGACATTTAAATGTAATCT+TGG | 0.329454 | 2_2:+64378992 | Msa0264420:three_prime_UTR |
| CCGACAGTTAAAACACTTCA+AGG | 0.341879 | 2_2:+64377726 | Msa0264420:intron |
| TTACAGCTCCCTTTGGCGTC+TGG | 0.345446 | 2_2:-64378761 | None:intergenic |
| TTGGTAGACAATGGGTTTAT+GGG | 0.350926 | 2_2:+64378716 | Msa0264420:CDS |
| TTTCATCTTCCTTCTCTCTT+CGG | 0.366302 | 2_2:+64376322 | Msa0264420:CDS |
| GGTGAATACCATTATCTTCA+TGG | 0.383957 | 2_2:+64377562 | Msa0264420:CDS |
| CCTTGAAGCTCTTTATTCTC+AGG | 0.389886 | 2_2:+64376425 | Msa0264420:CDS |
| CACATGGCACTTTGCTCTAT+GGG | 0.391842 | 2_2:-64378192 | None:intergenic |
| AAGAGCTTCAAGGGTTTCTT+GGG | 0.410172 | 2_2:-64376415 | None:intergenic |
| ACCGAGTGCCATGAAGATAA+TGG | 0.411246 | 2_2:-64377570 | None:intergenic |
| CCTGAGAATAAAGAGCTTCA+AGG | 0.416387 | 2_2:-64376425 | None:intergenic |
| AGAAAATTTACAGCTCCCTT+TGG | 0.418396 | 2_2:-64378768 | None:intergenic |
| GAATGACTTGGCAGCACTAA+AGG | 0.426467 | 2_2:+64377758 | Msa0264420:CDS |
| TCAAACATAAACCAACTTGT+AGG | 0.432749 | 2_2:+64379025 | Msa0264420:three_prime_UTR |
| TTACCTGAGGCAGAAGCAAC+CGG | 0.444107 | 2_2:-64377608 | None:intergenic |
| AGCAACAGCAGCACCGCTTT+AGG | 0.444700 | 2_2:+64376252 | Msa0264420:CDS |
| TATCCGGTTGCTTCTGCCTC+AGG | 0.446058 | 2_2:+64377605 | Msa0264420:CDS |
| TTGGTAGTTCAGCAATGGTT+GGG | 0.456189 | 2_2:+64377444 | Msa0264420:CDS |
| TTCAAGATTTGGTAGACAAT+GGG | 0.459540 | 2_2:+64378708 | Msa0264420:CDS |
| TTTGGTAGTTCAGCAATGGT+TGG | 0.463462 | 2_2:+64377443 | Msa0264420:CDS |
| GAGGACTTAGTTGTGATGCT+TGG | 0.477149 | 2_2:-64377532 | None:intergenic |
| TGCATTTGGTAGTTCAGCAA+TGG | 0.480534 | 2_2:+64377439 | Msa0264420:CDS |
| GGTAACAGTTGAAGCTTAAG+TGG | 0.481788 | 2_2:+64376779 | Msa0264420:intron |
| TTTAATTTAGGATTATCATA+TGG | 0.482685 | 2_2:+64377506 | Msa0264420:CDS |
| CTTCAAGATTTGGTAGACAA+TGG | 0.486758 | 2_2:+64378707 | Msa0264420:CDS |
| CAGTTGAAGCTTAAGTGGTA+TGG | 0.493314 | 2_2:+64376784 | Msa0264420:intron |
| AGGGCAGGAAGATCTGTCTA+TGG | 0.493392 | 2_2:+64377382 | Msa0264420:intron |
| CTGAGAATAAAGAGCTTCAA+GGG | 0.499082 | 2_2:-64376424 | None:intergenic |
| ACCATTATCTTCATGGCACT+CGG | 0.500659 | 2_2:+64377569 | Msa0264420:CDS |
| GCGTAAATCCAGACGCCAAA+GGG | 0.509490 | 2_2:+64378753 | Msa0264420:CDS |
| AATGACTTGGCAGCACTAAA+GGG | 0.512532 | 2_2:+64377759 | Msa0264420:CDS |
| GGTCCATCTTGTATATATGT+TGG | 0.512587 | 2_2:+64376375 | Msa0264420:CDS |
| TTAAAACACTTCAAGGCTTG+TGG | 0.533051 | 2_2:+64377733 | Msa0264420:CDS |
| GGAGTTGATATGTCAATCAC+TGG | 0.535633 | 2_2:+64378909 | Msa0264420:three_prime_UTR |
| TTATGTTATTACCTCAACTT+CGG | 0.535679 | 2_2:-64378240 | None:intergenic |
| AGGATACTTCACAACTGACT+TGG | 0.542875 | 2_2:-64376809 | None:intergenic |
| TCTTGGGTGGCAGTTTGAAG+AGG | 0.543205 | 2_2:-64376399 | None:intergenic |
| AGGCTTGTGGAGGAATGACT+TGG | 0.547292 | 2_2:+64377746 | Msa0264420:CDS |
| GGAATTTCGCACCGAAGTTG+AGG | 0.547885 | 2_2:+64378229 | Msa0264420:CDS |
| ACCTGCGACGACCGTCCTCA+TGG | 0.549456 | 2_2:+64376354 | Msa0264420:CDS |
| AACATGTCATCAACTATCAA+AGG | 0.550328 | 2_2:-64376659 | None:intergenic |
| GGCAGAGATCCGAAGAGAGA+AGG | 0.551019 | 2_2:-64376331 | None:intergenic |
| ACCATGAGGACGGTCGTCGC+AGG | 0.551432 | 2_2:-64376355 | None:intergenic |
| GCAGCACCGCTTTAGGTGGA+TGG | 0.553063 | 2_2:+64376259 | Msa0264420:CDS |
| GGACCAACATATATACAAGA+TGG | 0.557422 | 2_2:-64376378 | None:intergenic |
| AGCTTCAAGGGTTTCTTGGG+TGG | 0.559365 | 2_2:-64376412 | None:intergenic |
| ATGGTATTCACCATGAAAAG+AGG | 0.559608 | 2_2:-64377551 | None:intergenic |
| ATGTCCAAATTGTGGAGAAG+AGG | 0.561187 | 2_2:+64377785 | Msa0264420:CDS |
| AAGGGTTCATGTCCAAATTG+TGG | 0.563160 | 2_2:+64377777 | Msa0264420:CDS |
| CACCGTCCATCCACCTAAAG+CGG | 0.577414 | 2_2:-64376265 | None:intergenic |
| CACCGCTTTAGGTGGATGGA+CGG | 0.580229 | 2_2:+64376263 | Msa0264420:CDS |
| ACACTTATAGTTAGCAAGGA+AGG | 0.581147 | 2_2:+64378888 | Msa0264420:three_prime_UTR |
| TGCGTAAATCCAGACGCCAA+AGG | 0.585411 | 2_2:+64378752 | Msa0264420:CDS |
| ACAAACACATATGAACATGT+TGG | 0.585580 | 2_2:+64376221 | Msa0264420:exon |
| TGCATTTGTAAGAACAGACA+AGG | 0.588695 | 2_2:+64378157 | Msa0264420:CDS |
| TTGTACACTTATAGTTAGCA+AGG | 0.588786 | 2_2:+64378884 | Msa0264420:three_prime_UTR |
| AAACACTTCAAGGCTTGTGG+AGG | 0.598739 | 2_2:+64377736 | Msa0264420:CDS |
| ATGAGGACGGTCGTCGCAGG+TGG | 0.602794 | 2_2:-64376352 | None:intergenic |
| AAGTTGATGCTGCAAAACAT+TGG | 0.603833 | 2_2:-64377467 | None:intergenic |
| AACAGCAGCACCGCTTTAGG+TGG | 0.608229 | 2_2:+64376255 | Msa0264420:CDS |
| CTAACTATAAGTGTACAAGT+TGG | 0.614393 | 2_2:-64378879 | None:intergenic |
| ATCCTCGTTGCAGTATCAGA+AGG | 0.615303 | 2_2:+64376827 | Msa0264420:CDS |
| CCAATAAGCATTCACACACA+TGG | 0.617576 | 2_2:-64378208 | None:intergenic |
| AATCACCTCAGCATCAGCAT+AGG | 0.620614 | 2_2:-64376857 | None:intergenic |
| TGACATGTTTGATAGAGTAG+AGG | 0.624434 | 2_2:+64376673 | Msa0264420:CDS |
| GCAAGGGATGCATATTACAA+AGG | 0.629849 | 2_2:+64376632 | Msa0264420:CDS |
| GGCGTCTGGATTTACGCACA+AGG | 0.641633 | 2_2:-64378747 | None:intergenic |
| TACAAGATGGACCATGAGGA+CGG | 0.641757 | 2_2:-64376365 | None:intergenic |
| ATCAACCTATGCTGATGCTG+AGG | 0.651620 | 2_2:+64376852 | Msa0264420:CDS |
| ACATGGCACTTTGCTCTATG+GGG | 0.653009 | 2_2:-64378191 | None:intergenic |
| AGAAGGAAGATGAAACAGAA+CGG | 0.670572 | 2_2:-64376314 | None:intergenic |
| TATATACAAGATGGACCATG+AGG | 0.716840 | 2_2:-64376369 | None:intergenic |
| TGCCTTCTGATACTGCAACG+AGG | 0.764708 | 2_2:-64376829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATAAAACTATTTTC+AGG | - | chr2_2:64377124-64377143 | None:intergenic | 10.0% |
| !!! | GAAAATAGTTTTATTAAAAT+TGG | + | chr2_2:64377124-64377143 | Msa0264420:intron | 10.0% |
| !! | ATAAAAAGTTAAAATTTGTA+AGG | - | chr2_2:64377665-64377684 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr2_2:64378394-64378413 | Msa0264420:intron | 10.0% |
| !! | TAATAATATGTGAAATTAAT+TGG | - | chr2_2:64378599-64378618 | None:intergenic | 10.0% |
| !!! | ATTGAGAATTATTTTAAACA+TGG | + | chr2_2:64376588-64376607 | Msa0264420:intron | 15.0% |
| !! | ATCTTATGTTATTCATATTA+TGG | + | chr2_2:64376758-64376777 | Msa0264420:intron | 15.0% |
| !!! | TTTTATTAAAATTGGTTTTG+CGG | + | chr2_2:64377132-64377151 | Msa0264420:intron | 15.0% |
| !! | TAATAAATATTACATTCATC+TGG | + | chr2_2:64377271-64377290 | Msa0264420:intron | 15.0% |
| !!! | TATCAAAATGCATTTAATTT+AGG | + | chr2_2:64377494-64377513 | Msa0264420:CDS | 15.0% |
| !!! | TTTAATTTAGGATTATCATA+TGG | + | chr2_2:64377506-64377525 | Msa0264420:CDS | 15.0% |
| !! | TGTAACATAATATTAATTGA+AGG | + | chr2_2:64378423-64378442 | Msa0264420:intron | 15.0% |
| !! | GTAACATAATATTAATTGAA+GGG | + | chr2_2:64378424-64378443 | Msa0264420:intron | 15.0% |
| !!! | TCATTTTGAAACAATTTTTT+TGG | + | chr2_2:64378497-64378516 | Msa0264420:intron | 15.0% |
| !! | GAATAACATAAGATTAAGAT+CGG | - | chr2_2:64376752-64376771 | None:intergenic | 20.0% |
| !!! | GTTGTTTGTTTTATTGAAAA+AGG | + | chr2_2:64377950-64377969 | Msa0264420:intron | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr2_2:64378361-64378380 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr2_2:64378360-64378379 | Msa0264420:intron | 20.0% |
| !!! | ACTATGATTTTTCAATAGTA+AGG | + | chr2_2:64378794-64378813 | Msa0264420:three_prime_UTR | 20.0% |
| !! | TAGACATTTAAATGTAATCT+TGG | + | chr2_2:64378992-64379011 | Msa0264420:three_prime_UTR | 20.0% |
| !!! | GAATTATTTTAAACATGGCA+TGG | + | chr2_2:64376593-64376612 | Msa0264420:intron | 25.0% |
| !! | TGGTGAATTTTCATCAATAA+GGG | - | chr2_2:64376929-64376948 | None:intergenic | 25.0% |
| !! | TTGGTGAATTTTCATCAATA+AGG | - | chr2_2:64376930-64376949 | None:intergenic | 25.0% |
| ! | TAAGTATAAGCAACTGAAAT+TGG | - | chr2_2:64376949-64376968 | None:intergenic | 25.0% |
| !!! | ATACTTAAGTTTTAGTTGCA+TGG | + | chr2_2:64376962-64376981 | Msa0264420:intron | 25.0% |
| ! | ATAATGCAAAGAATGCATAT+TGG | + | chr2_2:64377024-64377043 | Msa0264420:intron | 25.0% |
| ! | TAATGCAAAGAATGCATATT+GGG | + | chr2_2:64377025-64377044 | Msa0264420:intron | 25.0% |
| !!! | GAATGTTTTTGTTTTCGAAA+AGG | + | chr2_2:64377183-64377202 | Msa0264420:intron | 25.0% |
| ! | ACTACCAAATGCAAAAAATA+AGG | - | chr2_2:64377432-64377451 | None:intergenic | 25.0% |
| ! | TATGAAAGACTACAAAGTTT+GGG | - | chr2_2:64377823-64377842 | None:intergenic | 25.0% |
| ! | TTATGTTATTACCTCAACTT+CGG | - | chr2_2:64378243-64378262 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | - | chr2_2:64378487-64378506 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACTTCTTGCAAA+AGG | + | chr2_2:64378553-64378572 | Msa0264420:intron | 25.0% |
| !!! | GATTTTTCAATAGTAAGGAA+AGG | + | chr2_2:64378799-64378818 | Msa0264420:three_prime_UTR | 25.0% |
| ACAAACACATATGAACATGT+TGG | + | chr2_2:64376221-64376240 | Msa0264420:exon | 30.0% | |
| AACATGTCATCAACTATCAA+AGG | - | chr2_2:64376662-64376681 | None:intergenic | 30.0% | |
| ! | AAGAAGTTAAGAAGCATATG+TGG | - | chr2_2:64376720-64376739 | None:intergenic | 30.0% |
| GCATTCTTTGCATTATTAAG+AGG | - | chr2_2:64377020-64377039 | None:intergenic | 30.0% | |
| AATGCAAAGAATGCATATTG+GGG | + | chr2_2:64377026-64377045 | Msa0264420:intron | 30.0% | |
| !!! | TTTTCAGGTCTAATCAATGT+AGG | - | chr2_2:64377109-64377128 | None:intergenic | 30.0% |
| CAAGAATAGAGAAAAGAGAA+GGG | - | chr2_2:64377328-64377347 | None:intergenic | 30.0% | |
| CGTCTTAATATTGAATGATG+TGG | + | chr2_2:64377355-64377374 | Msa0264420:intron | 30.0% | |
| ATATTGAATGATGTGGATGT+AGG | + | chr2_2:64377362-64377381 | Msa0264420:intron | 30.0% | |
| TATTGAATGATGTGGATGTA+GGG | + | chr2_2:64377363-64377382 | Msa0264420:intron | 30.0% | |
| !!! | TGGACCTTATTTTTTGCATT+TGG | + | chr2_2:64377425-64377444 | Msa0264420:CDS | 30.0% |
| ATATGAAAAGTAGCAGCAAA+AGG | - | chr2_2:64377638-64377657 | None:intergenic | 30.0% | |
| !!! | TGTTTTAACTGTCGGAAAAA+AGG | - | chr2_2:64377721-64377740 | None:intergenic | 30.0% |
| ATGAAAGACTACAAAGTTTG+GGG | - | chr2_2:64377822-64377841 | None:intergenic | 30.0% | |
| CTATGAAAGACTACAAAGTT+TGG | - | chr2_2:64377824-64377843 | None:intergenic | 30.0% | |
| CTTTGACTAATGATCTTGTT+TGG | + | chr2_2:64377865-64377884 | Msa0264420:intron | 30.0% | |
| TTGCTTATCGAATAAGTGTT+CGG | - | chr2_2:64377904-64377923 | None:intergenic | 30.0% | |
| TTAAAATTGTCTGAGTGAGT+TGG | + | chr2_2:64378113-64378132 | Msa0264420:intron | 30.0% | |
| TTCTTACAAATGCAAATACC+TGG | - | chr2_2:64378151-64378170 | None:intergenic | 30.0% | |
| !! | AAGCGACACTCATTTTTAAA+CGG | - | chr2_2:64378278-64378297 | None:intergenic | 30.0% |
| TTCATTAATCTGTGTGCAAT+TGG | - | chr2_2:64378304-64378323 | None:intergenic | 30.0% | |
| CAACAAACCAATAGTTGATT+AGG | - | chr2_2:64378370-64378389 | None:intergenic | 30.0% | |
| AAAAGGCAGTTCATAACATT+AGG | + | chr2_2:64378570-64378589 | Msa0264420:intron | 30.0% | |
| ! | TTCAAGATTTGGTAGACAAT+GGG | + | chr2_2:64378708-64378727 | Msa0264420:CDS | 30.0% |
| CTAACTATAAGTGTACAAGT+TGG | - | chr2_2:64378882-64378901 | None:intergenic | 30.0% | |
| TTGTACACTTATAGTTAGCA+AGG | + | chr2_2:64378884-64378903 | Msa0264420:three_prime_UTR | 30.0% | |
| !!! | AGAACGGTTGTTTCTGATTT+TGG | - | chr2_2:64376301-64376320 | None:intergenic | 35.0% |
| AGAAGGAAGATGAAACAGAA+CGG | - | chr2_2:64376317-64376336 | None:intergenic | 35.0% | |
| TTTCATCTTCCTTCTCTCTT+CGG | + | chr2_2:64376322-64376341 | Msa0264420:CDS | 35.0% | |
| TATATACAAGATGGACCATG+AGG | - | chr2_2:64376372-64376391 | None:intergenic | 35.0% | |
| GGTCCATCTTGTATATATGT+TGG | + | chr2_2:64376375-64376394 | Msa0264420:CDS | 35.0% | |
| GGACCAACATATATACAAGA+TGG | - | chr2_2:64376381-64376400 | None:intergenic | 35.0% | |
| CTGAGAATAAAGAGCTTCAA+GGG | - | chr2_2:64376427-64376446 | None:intergenic | 35.0% | |
| GCGCTTATGCTTAATTAAGT+TGG | + | chr2_2:64376515-64376534 | Msa0264420:intron | 35.0% | |
| TGATCTTTGCTAATAGGCAA+GGG | + | chr2_2:64376616-64376635 | Msa0264420:intron | 35.0% | |
| TGACATGTTTGATAGAGTAG+AGG | + | chr2_2:64376673-64376692 | Msa0264420:CDS | 35.0% | |
| ! | AGAAGCATATGTGGTGAATT+GGG | - | chr2_2:64376711-64376730 | None:intergenic | 35.0% |
| ! | AAGAAGCATATGTGGTGAAT+TGG | - | chr2_2:64376712-64376731 | None:intergenic | 35.0% |
| GATTAACTTCTTCTTTGCTC+TGG | + | chr2_2:64376892-64376911 | Msa0264420:intron | 35.0% | |
| AATGATGTTGGATCTTCATG+TGG | + | chr2_2:64377051-64377070 | Msa0264420:intron | 35.0% | |
| ! | TTCATCTGGTTAGAGTGTTA+AGG | + | chr2_2:64377285-64377304 | Msa0264420:intron | 35.0% |
| AGAAAAGAGAAGGGAAAAAG+GGG | - | chr2_2:64377319-64377338 | None:intergenic | 35.0% | |
| GAGAAAAGAGAAGGGAAAAA+GGG | - | chr2_2:64377320-64377339 | None:intergenic | 35.0% | |
| AGAGAAAAGAGAAGGGAAAA+AGG | - | chr2_2:64377321-64377340 | None:intergenic | 35.0% | |
| CCAAGAATAGAGAAAAGAGA+AGG | - | chr2_2:64377329-64377348 | None:intergenic | 35.0% | |
| ! | CCTTCTCTTTTCTCTATTCT+TGG | + | chr2_2:64377326-64377345 | Msa0264420:intron | 35.0% |
| !! | AAGTTGATGCTGCAAAACAT+TGG | - | chr2_2:64377470-64377489 | None:intergenic | 35.0% |
| ! | AATGTTTTGCAGCATCAACT+TGG | + | chr2_2:64377469-64377488 | Msa0264420:CDS | 35.0% |
| ! | ACAACTAAGTCCTCTTTTCA+TGG | + | chr2_2:64377541-64377560 | Msa0264420:CDS | 35.0% |
| ATGGTATTCACCATGAAAAG+AGG | - | chr2_2:64377554-64377573 | None:intergenic | 35.0% | |
| GGTGAATACCATTATCTTCA+TGG | + | chr2_2:64377562-64377581 | Msa0264420:CDS | 35.0% | |
| ! | AGCAAAAGGATTTTTACCTG+AGG | - | chr2_2:64377624-64377643 | None:intergenic | 35.0% |
| !!! | CCTTGAAGTGTTTTAACTGT+CGG | - | chr2_2:64377729-64377748 | None:intergenic | 35.0% |
| TTAAAACACTTCAAGGCTTG+TGG | + | chr2_2:64377733-64377752 | Msa0264420:CDS | 35.0% | |
| TGAAAGACTACAAAGTTTGG+GGG | - | chr2_2:64377821-64377840 | None:intergenic | 35.0% | |
| CATAGTCTCCTTAACTTCTT+TGG | + | chr2_2:64377839-64377858 | Msa0264420:intron | 35.0% | |
| CAAAGAAGCCAAAGAAGTTA+AGG | - | chr2_2:64377850-64377869 | None:intergenic | 35.0% | |
| TATGACAGTTAGCAATCTAG+AGG | + | chr2_2:64378008-64378027 | Msa0264420:intron | 35.0% | |
| ATGCAAATACCTGGAAGATA+AGG | - | chr2_2:64378142-64378161 | None:intergenic | 35.0% | |
| TGCATTTGTAAGAACAGACA+AGG | + | chr2_2:64378157-64378176 | Msa0264420:CDS | 35.0% | |
| !! | GACACTCATTTTTAAACGGA+GGG | - | chr2_2:64378274-64378293 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_2:64378523-64378542 | Msa0264420:intron | 35.0% |
| CAGCAATCAACTTCAAGATT+TGG | + | chr2_2:64378697-64378716 | Msa0264420:intron | 35.0% | |
| ! | CTTCAAGATTTGGTAGACAA+TGG | + | chr2_2:64378707-64378726 | Msa0264420:CDS | 35.0% |
| ! | TTTGGTAGACAATGGGTTTA+TGG | + | chr2_2:64378715-64378734 | Msa0264420:CDS | 35.0% |
| ! | TTGGTAGACAATGGGTTTAT+GGG | + | chr2_2:64378716-64378735 | Msa0264420:CDS | 35.0% |
| AGAAAATTTACAGCTCCCTT+TGG | - | chr2_2:64378771-64378790 | None:intergenic | 35.0% | |
| ACACTTATAGTTAGCAAGGA+AGG | + | chr2_2:64378888-64378907 | Msa0264420:three_prime_UTR | 35.0% | |
| AAGAGCTTCAAGGGTTTCTT+GGG | - | chr2_2:64376418-64376437 | None:intergenic | 40.0% | |
| AAAGAGCTTCAAGGGTTTCT+TGG | - | chr2_2:64376419-64376438 | None:intergenic | 40.0% | |
| CCTGAGAATAAAGAGCTTCA+AGG | - | chr2_2:64376428-64376447 | None:intergenic | 40.0% | |
| CCTTGAAGCTCTTTATTCTC+AGG | + | chr2_2:64376425-64376444 | Msa0264420:CDS | 40.0% | |
| GCATGGTGATCTTTGCTAAT+AGG | + | chr2_2:64376610-64376629 | Msa0264420:intron | 40.0% | |
| GTGATCTTTGCTAATAGGCA+AGG | + | chr2_2:64376615-64376634 | Msa0264420:intron | 40.0% | |
| GCAAGGGATGCATATTACAA+AGG | + | chr2_2:64376632-64376651 | Msa0264420:CDS | 40.0% | |
| AAGCATATGTGGTGAATTGG+GGG | - | chr2_2:64376709-64376728 | None:intergenic | 40.0% | |
| GAAGCATATGTGGTGAATTG+GGG | - | chr2_2:64376710-64376729 | None:intergenic | 40.0% | |
| GGTAACAGTTGAAGCTTAAG+TGG | + | chr2_2:64376779-64376798 | Msa0264420:intron | 40.0% | |
| CAGTTGAAGCTTAAGTGGTA+TGG | + | chr2_2:64376784-64376803 | Msa0264420:intron | 40.0% | |
| AGGATACTTCACAACTGACT+TGG | - | chr2_2:64376812-64376831 | None:intergenic | 40.0% | |
| CATATTGGGGAGAATGATGT+TGG | + | chr2_2:64377039-64377058 | Msa0264420:intron | 40.0% | |
| ! | TTTTTACATTAGCGAGTGCG+TGG | + | chr2_2:64377405-64377424 | Msa0264420:CDS | 40.0% |
| ! | TGCATTTGGTAGTTCAGCAA+TGG | + | chr2_2:64377439-64377458 | Msa0264420:CDS | 40.0% |
| ! | TTTGGTAGTTCAGCAATGGT+TGG | + | chr2_2:64377443-64377462 | Msa0264420:CDS | 40.0% |
| ! | TTGGTAGTTCAGCAATGGTT+GGG | + | chr2_2:64377444-64377463 | Msa0264420:CDS | 40.0% |
| ACCATTATCTTCATGGCACT+CGG | + | chr2_2:64377569-64377588 | Msa0264420:CDS | 40.0% | |
| !! | CGGTTTTGTCATAGGATATC+CGG | + | chr2_2:64377589-64377608 | Msa0264420:CDS | 40.0% |
| CCGACAGTTAAAACACTTCA+AGG | + | chr2_2:64377726-64377745 | Msa0264420:intron | 40.0% | |
| ! | AATGACTTGGCAGCACTAAA+GGG | + | chr2_2:64377759-64377778 | Msa0264420:CDS | 40.0% |
| AAGGGTTCATGTCCAAATTG+TGG | + | chr2_2:64377777-64377796 | Msa0264420:CDS | 40.0% | |
| ATGTCCAAATTGTGGAGAAG+AGG | + | chr2_2:64377785-64377804 | Msa0264420:CDS | 40.0% | |
| CTAACCTCTTCTCCACAATT+TGG | - | chr2_2:64377792-64377811 | None:intergenic | 40.0% | |
| AGTTGGATTCCTTATCTTCC+AGG | + | chr2_2:64378130-64378149 | Msa0264420:intron | 40.0% | |
| CCAATAAGCATTCACACACA+TGG | - | chr2_2:64378211-64378230 | None:intergenic | 40.0% | |
| CCATGTGTGTGAATGCTTAT+TGG | + | chr2_2:64378208-64378227 | Msa0264420:CDS | 40.0% | |
| !! | CGACACTCATTTTTAAACGG+AGG | - | chr2_2:64378275-64378294 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr2_2:64378527-64378546 | Msa0264420:intron | 40.0% |
| !! | GGAGTTGATATGTCAATCAC+TGG | + | chr2_2:64378909-64378928 | Msa0264420:three_prime_UTR | 40.0% |
| TACAAGATGGACCATGAGGA+CGG | - | chr2_2:64376368-64376387 | None:intergenic | 45.0% | |
| ATCCTCGTTGCAGTATCAGA+AGG | + | chr2_2:64376827-64376846 | Msa0264420:CDS | 45.0% | |
| ATCAACCTATGCTGATGCTG+AGG | + | chr2_2:64376852-64376871 | Msa0264420:CDS | 45.0% | |
| AATCACCTCAGCATCAGCAT+AGG | - | chr2_2:64376860-64376879 | None:intergenic | 45.0% | |
| ACTTCTTCTTTGCTCTGGCT+TGG | + | chr2_2:64376897-64376916 | Msa0264420:intron | 45.0% | |
| !! | TGGTTTTGCGGCGTTGAATT+AGG | + | chr2_2:64377144-64377163 | Msa0264420:intron | 45.0% |
| AGAGAAGGGAAAAAGGGGTA+GGG | - | chr2_2:64377314-64377333 | None:intergenic | 45.0% | |
| AAGAGAAGGGAAAAAGGGGT+AGG | - | chr2_2:64377315-64377334 | None:intergenic | 45.0% | |
| GAGGACTTAGTTGTGATGCT+TGG | - | chr2_2:64377535-64377554 | None:intergenic | 45.0% | |
| ACCGAGTGCCATGAAGATAA+TGG | - | chr2_2:64377573-64377592 | None:intergenic | 45.0% | |
| !! | ATGGCACTCGGTTTTGTCAT+AGG | + | chr2_2:64377581-64377600 | Msa0264420:CDS | 45.0% |
| AAACACTTCAAGGCTTGTGG+AGG | + | chr2_2:64377736-64377755 | Msa0264420:CDS | 45.0% | |
| ! | GAATGACTTGGCAGCACTAA+AGG | + | chr2_2:64377758-64377777 | Msa0264420:CDS | 45.0% |
| ACATGGCACTTTGCTCTATG+GGG | - | chr2_2:64378194-64378213 | None:intergenic | 45.0% | |
| CACATGGCACTTTGCTCTAT+GGG | - | chr2_2:64378195-64378214 | None:intergenic | 45.0% | |
| ACACATGGCACTTTGCTCTA+TGG | - | chr2_2:64378196-64378215 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr2_2:64378526-64378545 | Msa0264420:intron | 45.0% |
| TCTTGGGTGGCAGTTTGAAG+AGG | - | chr2_2:64376402-64376421 | None:intergenic | 50.0% | |
| AGCTTCAAGGGTTTCTTGGG+TGG | - | chr2_2:64376415-64376434 | None:intergenic | 50.0% | |
| TGCCTTCTGATACTGCAACG+AGG | - | chr2_2:64376832-64376851 | None:intergenic | 50.0% | |
| GAGAAGGGAAAAAGGGGTAG+GGG | - | chr2_2:64377313-64377332 | None:intergenic | 50.0% | |
| GAATGATGTGGATGTAGGGC+AGG | + | chr2_2:64377367-64377386 | Msa0264420:intron | 50.0% | |
| AGGGCAGGAAGATCTGTCTA+TGG | + | chr2_2:64377382-64377401 | Msa0264420:intron | 50.0% | |
| TTACCTGAGGCAGAAGCAAC+CGG | - | chr2_2:64377611-64377630 | None:intergenic | 50.0% | |
| AGGCTTGTGGAGGAATGACT+TGG | + | chr2_2:64377746-64377765 | Msa0264420:CDS | 50.0% | |
| GGAATTTCGCACCGAAGTTG+AGG | + | chr2_2:64378229-64378248 | Msa0264420:CDS | 50.0% | |
| TGCGTAAATCCAGACGCCAA+AGG | + | chr2_2:64378752-64378771 | Msa0264420:CDS | 50.0% | |
| GCGTAAATCCAGACGCCAAA+GGG | + | chr2_2:64378753-64378772 | Msa0264420:CDS | 50.0% | |
| AGCAACAGCAGCACCGCTTT+AGG | + | chr2_2:64376252-64376271 | Msa0264420:CDS | 55.0% | |
| ! | AACAGCAGCACCGCTTTAGG+TGG | + | chr2_2:64376255-64376274 | Msa0264420:CDS | 55.0% |
| ! | CACCGCTTTAGGTGGATGGA+CGG | + | chr2_2:64376263-64376282 | Msa0264420:CDS | 55.0% |
| CACCGTCCATCCACCTAAAG+CGG | - | chr2_2:64376268-64376287 | None:intergenic | 55.0% | |
| GGCAGAGATCCGAAGAGAGA+AGG | - | chr2_2:64376334-64376353 | None:intergenic | 55.0% | |
| TATCCGGTTGCTTCTGCCTC+AGG | + | chr2_2:64377605-64377624 | Msa0264420:CDS | 55.0% | |
| GGCGTCTGGATTTACGCACA+AGG | - | chr2_2:64378750-64378769 | None:intergenic | 55.0% | |
| TTACAGCTCCCTTTGGCGTC+TGG | - | chr2_2:64378764-64378783 | None:intergenic | 55.0% | |
| ! | GCAGCACCGCTTTAGGTGGA+TGG | + | chr2_2:64376259-64376278 | Msa0264420:CDS | 60.0% |
| ATGAGGACGGTCGTCGCAGG+TGG | - | chr2_2:64376355-64376374 | None:intergenic | 65.0% | |
| ACCTGCGACGACCGTCCTCA+TGG | + | chr2_2:64376354-64376373 | Msa0264420:CDS | 65.0% | |
| ACCATGAGGACGGTCGTCGC+AGG | - | chr2_2:64376358-64376377 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 64376203 | 64379046 | 64376203 | ID=Msa0264420;Name=Msa0264420 |
| chr2_2 | mRNA | 64376203 | 64379046 | 64376203 | ID=Msa0264420-mRNA-1;Parent=Msa0264420;Name=Msa0264420-mRNA-1;_AED=0.19;_eAED=0.19;_QI=28|1|1|1|1|1|7|263|286 |
| chr2_2 | exon | 64376203 | 64376446 | 64376203 | ID=Msa0264420-mRNA-1:exon:20059;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64376632 | 64376694 | 64376632 | ID=Msa0264420-mRNA-1:exon:20060;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64376787 | 64376873 | 64376787 | ID=Msa0264420-mRNA-1:exon:20061;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64377389 | 64377626 | 64377389 | ID=Msa0264420-mRNA-1:exon:20062;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64377733 | 64377806 | 64377733 | ID=Msa0264420-mRNA-1:exon:20063;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64378152 | 64378250 | 64378152 | ID=Msa0264420-mRNA-1:exon:20064;Parent=Msa0264420-mRNA-1 |
| chr2_2 | exon | 64378700 | 64379046 | 64378700 | ID=Msa0264420-mRNA-1:exon:20065;Parent=Msa0264420-mRNA-1 |
| chr2_2 | five_prime_UTR | 64376203 | 64376230 | 64376203 | ID=Msa0264420-mRNA-1:five_prime_utr;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64376231 | 64376446 | 64376231 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64376632 | 64376694 | 64376632 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64376787 | 64376873 | 64376787 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64377389 | 64377626 | 64377389 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64377733 | 64377806 | 64377733 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64378152 | 64378250 | 64378152 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | CDS | 64378700 | 64378783 | 64378700 | ID=Msa0264420-mRNA-1:cds;Parent=Msa0264420-mRNA-1 |
| chr2_2 | three_prime_UTR | 64378784 | 64379046 | 64378784 | ID=Msa0264420-mRNA-1:three_prime_utr;Parent=Msa0264420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
