Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1398460 | XP_013460875.1 | 99.649 | 285 | 1 | 0 | 3 | 287 | 4 | 288 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1398460 | A0A072UYR5 | 99.649 | 285 | 1 | 0 | 3 | 287 | 4 | 288 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016440 | Msa1398460 | 0.802662 | 5.044138e-49 | -8.615850e-47 |
| Msa0029730 | Msa1398460 | 0.828834 | 7.213985e-55 | -8.615850e-47 |
| Msa0037660 | Msa1398460 | 0.982688 | 9.711547e-156 | -8.615850e-47 |
| Msa0038110 | Msa1398460 | 0.800903 | 1.158220e-48 | -8.615850e-47 |
| Msa0045620 | Msa1398460 | 0.815001 | 1.156033e-51 | -8.615850e-47 |
| Msa0050530 | Msa1398460 | 0.810073 | 1.381480e-50 | -8.615850e-47 |
| Msa0091090 | Msa1398460 | -0.824449 | 8.022130e-54 | -8.615850e-47 |
| Msa0100600 | Msa1398460 | 0.805234 | 1.472826e-49 | -8.615850e-47 |
| Msa0100890 | Msa1398460 | 0.823560 | 1.297172e-53 | -8.615850e-47 |
| Msa1347610 | Msa1398460 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa1371800 | Msa1398460 | 0.808474 | 3.043182e-50 | -8.615850e-47 |
| Msa1376310 | Msa1398460 | 0.817784 | 2.755852e-52 | -8.615850e-47 |
| Msa1379940 | Msa1398460 | 0.803224 | 3.860654e-49 | -8.615850e-47 |
| Msa1385570 | Msa1398460 | 0.814719 | 1.335222e-51 | -8.615850e-47 |
| Msa1398460 | Msa1413900 | -0.813236 | 2.835206e-51 | -8.615850e-47 |
| Msa1398460 | Msa1417950 | 0.800050 | 1.728354e-48 | -8.615850e-47 |
| Msa1398460 | Msa1420830 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa1398460 | Msa1447900 | 0.808030 | 3.783907e-50 | -8.615850e-47 |
| Msa1398460 | Msa1450630 | -0.864930 | 8.531795e-65 | -8.615850e-47 |
| Msa1398460 | Msa1460970 | 0.840951 | 6.381903e-58 | -8.615850e-47 |
| Msa0623310 | Msa1398460 | 0.818799 | 1.623388e-52 | -8.615850e-47 |
| Msa0659020 | Msa1398460 | -0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0679780 | Msa1398460 | -0.811716 | 6.091568e-51 | -8.615850e-47 |
| Msa0706130 | Msa1398460 | -0.808662 | 2.774072e-50 | -8.615850e-47 |
| Msa0712910 | Msa1398460 | -0.809467 | 1.865392e-50 | -8.615850e-47 |
| Msa0761830 | Msa1398460 | 0.815278 | 1.003601e-51 | -8.615850e-47 |
| Msa0813630 | Msa1398460 | -0.813726 | 2.211662e-51 | -8.615850e-47 |
| Msa0177830 | Msa1398460 | 0.805008 | 1.642121e-49 | -8.615850e-47 |
| Msa0183200 | Msa1398460 | -0.813160 | 2.946585e-51 | -8.615850e-47 |
| Msa0219840 | Msa1398460 | 0.814657 | 1.377718e-51 | -8.615850e-47 |
| Msa1243630 | Msa1398460 | -0.828827 | 7.239342e-55 | -8.615850e-47 |
| Msa1244220 | Msa1398460 | -0.827134 | 1.849593e-54 | -8.615850e-47 |
| Msa1248220 | Msa1398460 | -0.816865 | 4.435953e-52 | -8.615850e-47 |
| Msa1308860 | Msa1398460 | 0.803202 | 3.901131e-49 | -8.615850e-47 |
| Msa0378670 | Msa1398460 | -0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0378700 | Msa1398460 | -0.809026 | 2.318845e-50 | -8.615850e-47 |
| Msa0416390 | Msa1398460 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0418100 | Msa1398460 | 0.932105 | 1.401547e-94 | -8.615850e-47 |
| Msa0428330 | Msa1398460 | -0.823170 | 1.600094e-53 | -8.615850e-47 |
| Msa1021560 | Msa1398460 | 0.806283 | 8.868002e-50 | -8.615850e-47 |
| Msa1026710 | Msa1398460 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
| Msa1043020 | Msa1398460 | -0.818087 | 2.353122e-52 | -8.615850e-47 |
| Msa1052030 | Msa1398460 | -0.800645 | 1.307543e-48 | -8.615850e-47 |
| Msa1096510 | Msa1398460 | -0.820232 | 7.648423e-53 | -8.615850e-47 |
| Msa1096520 | Msa1398460 | -0.819779 | 9.706494e-53 | -8.615850e-47 |
| Msa1096570 | Msa1398460 | -0.812680 | 3.752941e-51 | -8.615850e-47 |
| Msa0241040 | Msa1398460 | 0.806032 | 1.001456e-49 | -8.615850e-47 |
| Msa0276800 | Msa1398460 | -0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0349220 | Msa1398460 | -0.814346 | 1.614300e-51 | -8.615850e-47 |
| Msa1136890 | Msa1398460 | -0.811856 | 5.678732e-51 | -8.615850e-47 |
| Msa1211260 | Msa1398460 | -0.801765 | 7.715896e-49 | -8.615850e-47 |
| Msa0521940 | Msa1398460 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0568290 | Msa1398460 | -0.812393 | 4.337549e-51 | -8.615850e-47 |
| Msa0572360 | Msa1398460 | 0.809432 | 1.898126e-50 | -8.615850e-47 |
| Msa0590260 | Msa1398460 | -0.801610 | 8.300552e-49 | -8.615850e-47 |
| Msa0852090 | Msa1398460 | -0.811060 | 8.455702e-51 | -8.615850e-47 |
| Msa0861480 | Msa1398460 | -0.805739 | 1.154290e-49 | -8.615850e-47 |
| Msa0870020 | Msa1398460 | 0.801447 | 8.966194e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1398460 | MtrunA17_Chr3g0115701 | 99.649 | 285 | 1 | 0 | 3 | 287 | 4 | 288 | 0.0 | 573 |
| Msa1398460 | MtrunA17_Chr3g0124021 | 59.609 | 307 | 96 | 7 | 1 | 287 | 1 | 299 | 2.84e-109 | 318 |
| Msa1398460 | MtrunA17_Chr8g0382291 | 48.344 | 302 | 124 | 9 | 5 | 284 | 4 | 295 | 5.88e-72 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1398460 | AT1G35780.1 | 68.942 | 293 | 75 | 9 | 2 | 287 | 3 | 286 | 5.70e-124 | 355 |
| Msa1398460 | AT1G78150.1 | 67.133 | 286 | 76 | 4 | 4 | 287 | 5 | 274 | 8.11e-121 | 347 |
| Msa1398460 | AT1G78150.2 | 67.133 | 286 | 76 | 4 | 4 | 287 | 5 | 274 | 8.11e-121 | 347 |
| Msa1398460 | AT1G78150.3 | 60.952 | 315 | 76 | 5 | 4 | 287 | 5 | 303 | 2.52e-114 | 332 |
| Msa1398460 | AT4G39860.3 | 59.667 | 300 | 102 | 5 | 3 | 287 | 4 | 299 | 1.67e-110 | 322 |
| Msa1398460 | AT4G39860.4 | 59.667 | 300 | 102 | 5 | 3 | 287 | 4 | 299 | 1.67e-110 | 322 |
| Msa1398460 | AT4G39860.1 | 59.667 | 300 | 102 | 5 | 3 | 287 | 4 | 299 | 1.67e-110 | 322 |
| Msa1398460 | AT4G39860.2 | 59.333 | 300 | 102 | 6 | 3 | 287 | 4 | 298 | 8.78e-108 | 315 |
| Msa1398460 | AT1G35780.2 | 65.611 | 221 | 62 | 8 | 72 | 287 | 1 | 212 | 2.90e-82 | 247 |
| Msa1398460 | AT1G35780.4 | 65.611 | 221 | 62 | 8 | 72 | 287 | 1 | 212 | 2.90e-82 | 247 |
| Msa1398460 | AT1G35780.3 | 65.611 | 221 | 62 | 8 | 72 | 287 | 1 | 212 | 2.90e-82 | 247 |
| Msa1398460 | AT2G22270.1 | 43.769 | 329 | 127 | 13 | 9 | 287 | 8 | 328 | 1.14e-64 | 206 |
| Msa1398460 | AT2G22270.2 | 42.857 | 287 | 110 | 11 | 50 | 287 | 8 | 289 | 1.00e-52 | 174 |
Find 109 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTTGACCTTGTATTTC+TGG | 0.093210 | tig0022253:+98394 | Msa1398460:three_prime_UTR |
| GACCTTGTATTTCTGGGTTT+TGG | 0.124016 | tig0022253:+98401 | Msa1398460:three_prime_UTR |
| CTGACAGTTCTGCAAATTTC+TGG | 0.130552 | tig0022253:-98115 | None:intergenic |
| ATTGGCCGAGGTTTGATTTC+TGG | 0.198337 | tig0022253:-97637 | None:intergenic |
| TTCATATACTGTCTTTGTTT+TGG | 0.233802 | tig0022253:+98336 | Msa1398460:three_prime_UTR |
| ATCGATTGGACGAGTGTTAA+TGG | 0.254059 | tig0022253:-98562 | None:intergenic |
| GGGTTGGCACTGCCATCCTC+TGG | 0.261646 | tig0022253:-97288 | None:intergenic |
| TCCAGTATGCGAGGAGTAAT+TGG | 0.289565 | tig0022253:-97655 | None:intergenic |
| GATTAATATCTTGACCAAAA+AGG | 0.312653 | tig0022253:+98446 | Msa1398460:three_prime_UTR |
| TCAGGAAACAACATATTTAA+AGG | 0.318062 | tig0022253:+98134 | Msa1398460:CDS |
| TGTTCTTTGGCGTGTGAATA+TGG | 0.319007 | tig0022253:+96009 | Msa1398460:exon |
| GCCAATTACTCCTCGCATAC+TGG | 0.323326 | tig0022253:+97654 | Msa1398460:CDS |
| TTGCGCTGGTATAATTTGTT+AGG | 0.345832 | tig0022253:+98303 | Msa1398460:exon |
| GCTTGCTTAATGAAGTGATT+TGG | 0.352725 | tig0022253:+98516 | Msa1398460:three_prime_UTR |
| TAAGGTGGTGTTTGGTGGTC+AGG | 0.358985 | tig0022253:+96276 | Msa1398460:CDS |
| TATTAATCAAGGAACCTAAA+AGG | 0.361392 | tig0022253:-98431 | None:intergenic |
| TTATTTGACCTTGTATTTCT+GGG | 0.366244 | tig0022253:+98395 | Msa1398460:three_prime_UTR |
| GGGATCAGTAAGGTGGTGTT+TGG | 0.367307 | tig0022253:+96268 | Msa1398460:CDS |
| TACCTGGTACATGCGAATTC+CGG | 0.384648 | tig0022253:-97325 | None:intergenic |
| TAAAGGCGACTCTCCACCTT+TGG | 0.396203 | tig0022253:+98151 | Msa1398460:CDS |
| GGTTGGCACTGCCATCCTCT+GGG | 0.400803 | tig0022253:-97287 | None:intergenic |
| TATAAGATGAAGGAGATTAC+TGG | 0.401416 | tig0022253:+97228 | Msa1398460:CDS |
| TCACGCTGCTTGGCCACCTC+AGG | 0.402765 | tig0022253:-97514 | None:intergenic |
| CAACTGCAGATCTACTTGTT+TGG | 0.409333 | tig0022253:+96062 | Msa1398460:CDS |
| TTCCGCCACTCGTTCTCATC+AGG | 0.416604 | tig0022253:+96123 | Msa1398460:CDS |
| TCCACTGAGCTCACGCTGCT+TGG | 0.434899 | tig0022253:-97524 | None:intergenic |
| TTTGGTCAAGATATTAATCA+AGG | 0.435079 | tig0022253:-98442 | None:intergenic |
| AAATTGCAGCAAGCTATTGC+GGG | 0.436764 | tig0022253:+97430 | Msa1398460:intron |
| AATTTCTAGAAAGCCTTGTT+CGG | 0.448306 | tig0022253:+97203 | Msa1398460:intron |
| AACCCTTCTGCAAATAAAAC+CGG | 0.449099 | tig0022253:+97306 | Msa1398460:CDS |
| GGAATCAGTCATATCTCCTT+TGG | 0.451670 | tig0022253:+97451 | Msa1398460:CDS |
| CAGAAATTTGCAGAACTGTC+AGG | 0.455797 | tig0022253:+98116 | Msa1398460:CDS |
| TGGGGCCTCATCTTCTCCAT+TGG | 0.457851 | tig0022253:-97268 | None:intergenic |
| GGAGATCAAGATGCTACTAC+AGG | 0.459580 | tig0022253:+98056 | Msa1398460:CDS |
| GCAATGCTGCTCTCGCCACC+AGG | 0.462130 | tig0022253:-98284 | None:intergenic |
| GAACAAGAGAGAAAAGATAG+TGG | 0.472673 | tig0022253:-95991 | None:intergenic |
| AACAAGAGAGAAAAGATAGT+GGG | 0.474343 | tig0022253:-95990 | None:intergenic |
| GCAAAACTCCGAGAGATAAG+TGG | 0.475331 | tig0022253:+98197 | Msa1398460:CDS |
| ATGAAGGAGATTACTGGTAG+TGG | 0.479857 | tig0022253:+97234 | Msa1398460:CDS |
| ATCAGTAAGGTGGTGTTTGG+TGG | 0.488066 | tig0022253:+96271 | Msa1398460:CDS |
| GCGGAGTCTAGAGACTATCT+AGG | 0.489892 | tig0022253:+98245 | Msa1398460:CDS |
| GCCACCTCAGGCAATGAAGC+AGG | 0.491990 | tig0022253:-97502 | None:intergenic |
| GTGGCGGAAGAAGGAGGAGC+TGG | 0.495714 | tig0022253:-96109 | None:intergenic |
| GGAGCTGGAGAATCATTGAT+TGG | 0.497326 | tig0022253:-96094 | None:intergenic |
| GAGACTATCTAGGCGGCGTA+CGG | 0.501215 | tig0022253:+98255 | Msa1398460:CDS |
| TTGAAAGGGAGCATAGGCCT+TGG | 0.501700 | tig0022253:+97679 | Msa1398460:CDS |
| CTCGCATACTGGAGTTGAAA+GGG | 0.507435 | tig0022253:+97665 | Msa1398460:CDS |
| TGGCGAGAGCAGCATTGCGC+TGG | 0.511766 | tig0022253:+98289 | Msa1398460:CDS |
| TTAATATTTATATATAGTAC+AGG | 0.511879 | tig0022253:+95804 | Msa1398460:five_prime_UTR |
| TGTTACCTTGATTAGGGTGA+TGG | 0.512492 | tig0022253:+98035 | Msa1398460:intron |
| CGAGGTTTGATTTCTGGTGG+TGG | 0.514488 | tig0022253:-97631 | None:intergenic |
| GGCGGCGTACGGAAGCCGCC+TGG | 0.516854 | tig0022253:+98266 | Msa1398460:CDS |
| TGAGAACGAGTGGCGGAAGA+AGG | 0.518411 | tig0022253:-96118 | None:intergenic |
| GGGAGTAACATCTTTGCTGA+TGG | 0.529787 | tig0022253:+98218 | Msa1398460:CDS |
| AAAATTGCAGCAAGCTATTG+CGG | 0.532841 | tig0022253:+97429 | Msa1398460:intron |
| GCAAAGTGCAAGGAGCTTAG+TGG | 0.534359 | tig0022253:+97592 | Msa1398460:CDS |
| GAAGTGTGTGGTTTCCTGAC+CGG | 0.535007 | tig0022253:-96040 | None:intergenic |
| GAAGATGAGGCCCCAGAGGA+TGG | 0.538465 | tig0022253:+97276 | Msa1398460:CDS |
| AACCGGAATTCGCATGTACC+AGG | 0.538686 | tig0022253:+97323 | Msa1398460:CDS |
| ATATGGAGAACACACCGGTC+AGG | 0.548145 | tig0022253:+96026 | Msa1398460:exon |
| GTGTTAATGGAAATAATCAA+TGG | 0.549038 | tig0022253:-98549 | None:intergenic |
| GCCTGCTTCATTGCCTGAGG+TGG | 0.550736 | tig0022253:+97501 | Msa1398460:CDS |
| ATGCGAGGAGTAATTGGCCG+AGG | 0.557491 | tig0022253:-97649 | None:intergenic |
| AACACTCTCTTCCTCGCCAA+AGG | 0.557790 | tig0022253:-97467 | None:intergenic |
| AGTGGAATATTTGTAGCCAA+TGG | 0.558445 | tig0022253:+97252 | Msa1398460:CDS |
| AGGTTGAGAGCTTAAACAAA+CGG | 0.563427 | tig0022253:+96311 | Msa1398460:CDS |
| TGTTACTCCCACTTATCTCT+CGG | 0.571485 | tig0022253:-98205 | None:intergenic |
| ACAAGAGAGAAAAGATAGTG+GGG | 0.571498 | tig0022253:-95989 | None:intergenic |
| TTGTTCGGAGTATAAGATGA+AGG | 0.575022 | tig0022253:+97218 | Msa1398460:CDS |
| CCTCGCATACTGGAGTTGAA+AGG | 0.579755 | tig0022253:+97664 | Msa1398460:CDS |
| TTCATCTTATACTCCGAACA+AGG | 0.583995 | tig0022253:-97216 | None:intergenic |
| GGAGTAACATCTTTGCTGAT+GGG | 0.589979 | tig0022253:+98219 | Msa1398460:CDS |
| TCCCAAAACCCAGAAATACA+AGG | 0.590755 | tig0022253:-98403 | None:intergenic |
| TAACATCTTTGCTGATGGGA+AGG | 0.591975 | tig0022253:+98223 | Msa1398460:CDS |
| GTTGGCACTGCCATCCTCTG+GGG | 0.593210 | tig0022253:-97286 | None:intergenic |
| GAACGAGTGGCGGAAGAAGG+AGG | 0.593909 | tig0022253:-96115 | None:intergenic |
| GCGTGAGCTCAGTGGAACAA+TGG | 0.596230 | tig0022253:+97531 | Msa1398460:CDS |
| GATTTCTCAGCAGCCAAAGG+TGG | 0.597007 | tig0022253:-98164 | None:intergenic |
| CTGGAGTTGAAAGGGAGCAT+AGG | 0.598124 | tig0022253:+97673 | Msa1398460:CDS |
| CTGCTGAGAAATCATTGAGT+GGG | 0.598754 | tig0022253:+98174 | Msa1398460:CDS |
| AACAAACAACCAATTAGCAA+TGG | 0.599628 | tig0022253:-98470 | None:intergenic |
| GCTTTCTGATGCAAAGTGCA+AGG | 0.600086 | tig0022253:+97582 | Msa1398460:CDS |
| GGCCGAGGTTTGATTTCTGG+TGG | 0.601150 | tig0022253:-97634 | None:intergenic |
| CAAAACTCCGAGAGATAAGT+GGG | 0.610976 | tig0022253:+98198 | Msa1398460:CDS |
| ATGCTGCTCTCGCCACCAGG+CGG | 0.612447 | tig0022253:-98281 | None:intergenic |
| GAGATCAAGATGCTACTACA+GGG | 0.614754 | tig0022253:+98057 | Msa1398460:CDS |
| CATCTTTGCTGATGGGAAGG+CGG | 0.619726 | tig0022253:+98226 | Msa1398460:CDS |
| TGCATACATGACTTTCTCCA+AGG | 0.621174 | tig0022253:-97696 | None:intergenic |
| TGTAGCCAATGGAGAAGATG+AGG | 0.623609 | tig0022253:+97263 | Msa1398460:CDS |
| GCCGTCGGATGGGATCAGTA+AGG | 0.631418 | tig0022253:+96258 | Msa1398460:intron |
| AATGATTTCTCAGCAGCCAA+AGG | 0.633502 | tig0022253:-98167 | None:intergenic |
| GCCAAGCAGCGTGAGCTCAG+TGG | 0.638579 | tig0022253:+97523 | Msa1398460:CDS |
| TGGTCAGGTTACTGATGAAG+AGG | 0.639819 | tig0022253:+96291 | Msa1398460:CDS |
| CCTTTCAACTCCAGTATGCG+AGG | 0.640438 | tig0022253:-97664 | None:intergenic |
| CACCACCAGAAATCAAACCT+CGG | 0.641332 | tig0022253:+97632 | Msa1398460:CDS |
| AAAGCCTGCTTCATTGCCTG+AGG | 0.644684 | tig0022253:+97498 | Msa1398460:CDS |
| GGCGTACGGAAGCCGCCTGG+TGG | 0.647825 | tig0022253:+98269 | Msa1398460:CDS |
| CAGTCATATCTCCTTTGGCG+AGG | 0.651432 | tig0022253:+97456 | Msa1398460:CDS |
| TACCTGATGAGAACGAGTGG+CGG | 0.652182 | tig0022253:-96125 | None:intergenic |
| GTCGGATGGGATCAGTAAGG+TGG | 0.653944 | tig0022253:+96261 | Msa1398460:CDS |
| GCTGCTGAGAAATCATTGAG+TGG | 0.655595 | tig0022253:+98173 | Msa1398460:CDS |
| TGGAGAAGATGAGGCCCCAG+AGG | 0.662591 | tig0022253:+97272 | Msa1398460:CDS |
| ACCTTACTGATCCCATCCGA+CGG | 0.677868 | tig0022253:-96259 | None:intergenic |
| AGATCTGCAGTTGAAGTGTG+TGG | 0.688104 | tig0022253:-96052 | None:intergenic |
| ACTTACCTGATGAGAACGAG+TGG | 0.690550 | tig0022253:-96128 | None:intergenic |
| AGATCAAGATGCTACTACAG+GGG | 0.694326 | tig0022253:+98058 | Msa1398460:CDS |
| TGCTGAGAAATCATTGAGTG+GGG | 0.706728 | tig0022253:+98175 | Msa1398460:CDS |
| TGTGAATATGGAGAACACAC+CGG | 0.726955 | tig0022253:+96021 | Msa1398460:exon |
| GAGTCTAGAGACTATCTAGG+CGG | 0.855715 | tig0022253:+98248 | Msa1398460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTTATATATAGTAC+AGG | + | tig0022253:95804-95823 | Msa1398460:five_prime_UTR | 10.0% |
| !!! | CTTATGATTTTATTTTTGTT+TGG | + | tig0022253:96217-96236 | Msa1398460:intron | 15.0% |
| !! | ATTTGAATTAGCTAAAAATA+AGG | - | tig0022253:96355-96374 | None:intergenic | 15.0% |
| !!! | TGGTTTTAATTAATTTTTAG+TGG | + | tig0022253:98356-98375 | Msa1398460:three_prime_UTR | 15.0% |
| !!! | GGTTTTAATTAATTTTTAGT+GGG | + | tig0022253:98357-98376 | Msa1398460:three_prime_UTR | 15.0% |
| !!! | GTTTTAATTAATTTTTAGTG+GGG | + | tig0022253:98358-98377 | Msa1398460:three_prime_UTR | 15.0% |
| !!! | TTTATTTTTGTTTGGTTGAT+TGG | + | tig0022253:96225-96244 | Msa1398460:intron | 20.0% |
| !! | ATAAAAATAAATACCTGTCA+CGG | + | tig0022253:96414-96433 | Msa1398460:intron | 20.0% |
| !!! | TCTGTTATTTACTATCTAAT+AGG | + | tig0022253:96586-96605 | Msa1398460:intron | 20.0% |
| !! | TTATTTACTATCTAATAGGA+AGG | + | tig0022253:96590-96609 | Msa1398460:intron | 20.0% |
| !! | TAAAAGCTTAAATATGTGTT+TGG | + | tig0022253:97069-97088 | Msa1398460:intron | 20.0% |
| !!! | CTCAATTTTTGTATCATTTA+TGG | + | tig0022253:97099-97118 | Msa1398460:intron | 20.0% |
| !!! | GATCCAAATTTTAAAATTGA+GGG | - | tig0022253:97784-97803 | None:intergenic | 20.0% |
| !!! | TGATCCAAATTTTAAAATTG+AGG | - | tig0022253:97785-97804 | None:intergenic | 20.0% |
| !!! | TTTTAAAGAGTTTAGTTGAG+TGG | - | tig0022253:95963-95982 | None:intergenic | 25.0% |
| !!! | ATCTAATAGGAAGGTATTAT+AGG | + | tig0022253:96599-96618 | Msa1398460:intron | 25.0% |
| !! | ATGTGGGATTATATTGTTTT+CGG | - | tig0022253:96846-96865 | None:intergenic | 25.0% |
| ! | AGCTATTAGTATCACATATA+GGG | + | tig0022253:96868-96887 | Msa1398460:intron | 25.0% |
| !! | GTATAGTTTTTCCTAAATTG+CGG | + | tig0022253:96896-96915 | Msa1398460:intron | 25.0% |
| ! | AACACCAAAACAAATTCATA+AGG | - | tig0022253:97182-97201 | None:intergenic | 25.0% |
| !!! | AGACTATCATATTTTTGCAA+TGG | + | tig0022253:97370-97389 | Msa1398460:intron | 25.0% |
| !! | TTGCTAACTTGAATTGTTTT+GGG | + | tig0022253:97729-97748 | Msa1398460:intron | 25.0% |
| !!! | TCACCCTCAATTTTAAAATT+TGG | + | tig0022253:97778-97797 | Msa1398460:intron | 25.0% |
| !! | GTTCATATAGTACTTTGTTT+AGG | + | tig0022253:97836-97855 | Msa1398460:intron | 25.0% |
| !! | ATAACTATAGCTTTTCGTTT+CGG | - | tig0022253:97888-97907 | None:intergenic | 25.0% |
| ! | TCAGGAAACAACATATTTAA+AGG | + | tig0022253:98134-98153 | Msa1398460:CDS | 25.0% |
| !!! | TTCATATACTGTCTTTGTTT+TGG | + | tig0022253:98336-98355 | Msa1398460:three_prime_UTR | 25.0% |
| ! | ATTATTTGACCTTGTATTTC+TGG | + | tig0022253:98394-98413 | Msa1398460:three_prime_UTR | 25.0% |
| ! | TTATTTGACCTTGTATTTCT+GGG | + | tig0022253:98395-98414 | Msa1398460:three_prime_UTR | 25.0% |
| ! | TATTAATCAAGGAACCTAAA+AGG | - | tig0022253:98434-98453 | None:intergenic | 25.0% |
| ! | TTTGGTCAAGATATTAATCA+AGG | - | tig0022253:98445-98464 | None:intergenic | 25.0% |
| ! | GATTAATATCTTGACCAAAA+AGG | + | tig0022253:98446-98465 | Msa1398460:three_prime_UTR | 25.0% |
| !! | TCATAATCATGTGTTTTCTT+CGG | + | tig0022253:98492-98511 | Msa1398460:three_prime_UTR | 25.0% |
| AACAAGAGAGAAAAGATAGT+GGG | - | tig0022253:95993-96012 | None:intergenic | 30.0% | |
| ! | ATCTTTTCTCTCTTGTTCTT+TGG | + | tig0022253:95996-96015 | Msa1398460:five_prime_UTR | 30.0% |
| ACGTAACATTTCGTTGTTAT+TGG | + | tig0022253:96164-96183 | Msa1398460:intron | 30.0% | |
| !!! | TTTTTTTGTTCCGTTGTTTC+AGG | + | tig0022253:96445-96464 | Msa1398460:intron | 30.0% |
| ACAAACAAAACCTGAAACAA+CGG | - | tig0022253:96458-96477 | None:intergenic | 30.0% | |
| !! | GAAGGTATTATAGGTGAAAA+GGG | + | tig0022253:96608-96627 | Msa1398460:intron | 30.0% |
| TATAGGTGAAAAGGGTTAAA+TGG | + | tig0022253:96616-96635 | Msa1398460:intron | 30.0% | |
| AGTTGTTGAATTTCAATGAG+TGG | + | tig0022253:96649-96668 | Msa1398460:intron | 30.0% | |
| AATTTCAATGAGTGGATCTA+TGG | + | tig0022253:96657-96676 | Msa1398460:intron | 30.0% | |
| GCTACTCTAAATGGTAAAAA+TGG | - | tig0022253:96725-96744 | None:intergenic | 30.0% | |
| GAAATCACATTTGCAACATT+GGG | + | tig0022253:96745-96764 | Msa1398460:intron | 30.0% | |
| TGATACTAATAGCTCAATGT+GGG | - | tig0022253:96862-96881 | None:intergenic | 30.0% | |
| GAGCTATTAGTATCACATAT+AGG | + | tig0022253:96867-96886 | Msa1398460:intron | 30.0% | |
| GACTATACGATATTGTGATT+TGG | + | tig0022253:96927-96946 | Msa1398460:intron | 30.0% | |
| ! | ATGATTTTGCCTAAATTGTC+CGG | + | tig0022253:96965-96984 | Msa1398460:intron | 30.0% |
| ! | CTAAAAGGCAAAAGTATGTT+TGG | - | tig0022253:97026-97045 | None:intergenic | 30.0% |
| ! | AAGCTTTTAATAAAGCAGCA+GGG | - | tig0022253:97058-97077 | None:intergenic | 30.0% |
| ! | TAAGCTTTTAATAAAGCAGC+AGG | - | tig0022253:97059-97078 | None:intergenic | 30.0% |
| ! | ATGGACTGAACTTATAATCT+TGG | + | tig0022253:97118-97137 | Msa1398460:intron | 30.0% |
| CTGAACTTATAATCTTGGAA+CGG | + | tig0022253:97123-97142 | Msa1398460:intron | 30.0% | |
| !! | TGTGCCTTATGAATTTGTTT+TGG | + | tig0022253:97175-97194 | Msa1398460:intron | 30.0% |
| !! | AATTTCTAGAAAGCCTTGTT+CGG | + | tig0022253:97203-97222 | Msa1398460:intron | 30.0% |
| TATAAGATGAAGGAGATTAC+TGG | + | tig0022253:97228-97247 | Msa1398460:CDS | 30.0% | |
| TACAATAAACGCAATATACC+TGG | - | tig0022253:97344-97363 | None:intergenic | 30.0% | |
| ! | TTCAAGTTAGCAACTTATAG+TGG | - | tig0022253:97722-97741 | None:intergenic | 30.0% |
| ! | GTTGCTAACTTGAATTGTTT+TGG | + | tig0022253:97728-97747 | Msa1398460:intron | 30.0% |
| AAGCTATAGTTATTGCATCA+TGG | + | tig0022253:97895-97914 | Msa1398460:intron | 30.0% | |
| GGTAACAACAACACAATAAA+TGG | - | tig0022253:98022-98041 | None:intergenic | 30.0% | |
| ! | TGTTGTTGTTACCTTGATTA+GGG | + | tig0022253:98029-98048 | Msa1398460:intron | 30.0% |
| AACAAACAACCAATTAGCAA+TGG | - | tig0022253:98473-98492 | None:intergenic | 30.0% | |
| ACAAGAGAGAAAAGATAGTG+GGG | - | tig0022253:95992-96011 | None:intergenic | 35.0% | |
| GAACAAGAGAGAAAAGATAG+TGG | - | tig0022253:95994-96013 | None:intergenic | 35.0% | |
| CATAAGCAATTGAACTCAAG+CGG | - | tig0022253:96203-96222 | None:intergenic | 35.0% | |
| AGGTTGAGAGCTTAAACAAA+CGG | + | tig0022253:96311-96330 | Msa1398460:CDS | 35.0% | |
| !! | GGAAGGTATTATAGGTGAAA+AGG | + | tig0022253:96607-96626 | Msa1398460:intron | 35.0% |
| TGTGATTTCGCTACTCTAAA+TGG | - | tig0022253:96734-96753 | None:intergenic | 35.0% | |
| CGAAATCACATTTGCAACAT+TGG | + | tig0022253:96744-96763 | Msa1398460:intron | 35.0% | |
| GTGATACTAATAGCTCAATG+TGG | - | tig0022253:96863-96882 | None:intergenic | 35.0% | |
| ACATAAACAAAACGTGCTAC+CGG | - | tig0022253:96987-97006 | None:intergenic | 35.0% | |
| ! | CAAAAGTATGTTTGGATTCG+TGG | - | tig0022253:97018-97037 | None:intergenic | 35.0% |
| TTCATCTTATACTCCGAACA+AGG | - | tig0022253:97219-97238 | None:intergenic | 35.0% | |
| TTGTTCGGAGTATAAGATGA+AGG | + | tig0022253:97218-97237 | Msa1398460:CDS | 35.0% | |
| AGTGGAATATTTGTAGCCAA+TGG | + | tig0022253:97252-97271 | Msa1398460:CDS | 35.0% | |
| AACCCTTCTGCAAATAAAAC+CGG | + | tig0022253:97306-97325 | Msa1398460:CDS | 35.0% | |
| !!! | TTCCGGTTTTATTTGCAGAA+GGG | - | tig0022253:97311-97330 | None:intergenic | 35.0% |
| !!! | ATTCCGGTTTTATTTGCAGA+AGG | - | tig0022253:97312-97331 | None:intergenic | 35.0% |
| AAAATTGCAGCAAGCTATTG+CGG | + | tig0022253:97429-97448 | Msa1398460:intron | 35.0% | |
| ! | GTGTTGTTGTTACCTTGATT+AGG | + | tig0022253:98028-98047 | Msa1398460:intron | 35.0% |
| !!! | TTCTTTGCTGTTTTCAGAAC+TGG | - | tig0022253:98086-98105 | None:intergenic | 35.0% |
| !! | TTGCGCTGGTATAATTTGTT+AGG | + | tig0022253:98303-98322 | Msa1398460:exon | 35.0% |
| !!! | ACCTTGTATTTCTGGGTTTT+GGG | + | tig0022253:98402-98421 | Msa1398460:three_prime_UTR | 35.0% |
| !!! | GTTTTGGGAATTTGCCTTTT+AGG | + | tig0022253:98417-98436 | Msa1398460:three_prime_UTR | 35.0% |
| ! | CAATTAGCAATGGTCCTTTT+TGG | - | tig0022253:98463-98482 | None:intergenic | 35.0% |
| CAAAAAGGACCATTGCTAAT+TGG | + | tig0022253:98461-98480 | Msa1398460:three_prime_UTR | 35.0% | |
| GCTTGCTTAATGAAGTGATT+TGG | + | tig0022253:98516-98535 | Msa1398460:three_prime_UTR | 35.0% | |
| TGTTCTTTGGCGTGTGAATA+TGG | + | tig0022253:96009-96028 | Msa1398460:exon | 40.0% | |
| TGTGAATATGGAGAACACAC+CGG | + | tig0022253:96021-96040 | Msa1398460:exon | 40.0% | |
| CAACTGCAGATCTACTTGTT+TGG | + | tig0022253:96062-96081 | Msa1398460:CDS | 40.0% | |
| ! | ATTGGTGAATTTTCAGCCGT+CGG | + | tig0022253:96243-96262 | Msa1398460:intron | 40.0% |
| TCACATTTGCAACATTGGGT+TGG | + | tig0022253:96749-96768 | Msa1398460:intron | 40.0% | |
| GCAGGGCAGATTAAACTAAA+AGG | - | tig0022253:97041-97060 | None:intergenic | 40.0% | |
| ! | AATCTTGGAACGGTTTTGCT+TGG | + | tig0022253:97133-97152 | Msa1398460:intron | 40.0% |
| ATGAAGGAGATTACTGGTAG+TGG | + | tig0022253:97234-97253 | Msa1398460:CDS | 40.0% | |
| !!! | GGTTTTATTTGCAGAAGGGT+TGG | - | tig0022253:97307-97326 | None:intergenic | 40.0% |
| AAATTGCAGCAAGCTATTGC+GGG | + | tig0022253:97430-97449 | Msa1398460:intron | 40.0% | |
| GGAATCAGTCATATCTCCTT+TGG | + | tig0022253:97451-97470 | Msa1398460:CDS | 40.0% | |
| TGCATACATGACTTTCTCCA+AGG | - | tig0022253:97699-97718 | None:intergenic | 40.0% | |
| TGTTACCTTGATTAGGGTGA+TGG | + | tig0022253:98035-98054 | Msa1398460:intron | 40.0% | |
| GAGATCAAGATGCTACTACA+GGG | + | tig0022253:98057-98076 | Msa1398460:CDS | 40.0% | |
| AGATCAAGATGCTACTACAG+GGG | + | tig0022253:98058-98077 | Msa1398460:CDS | 40.0% | |
| CTGACAGTTCTGCAAATTTC+TGG | - | tig0022253:98118-98137 | None:intergenic | 40.0% | |
| CAGAAATTTGCAGAACTGTC+AGG | + | tig0022253:98116-98135 | Msa1398460:CDS | 40.0% | |
| AATGATTTCTCAGCAGCCAA+AGG | - | tig0022253:98170-98189 | None:intergenic | 40.0% | |
| CTGCTGAGAAATCATTGAGT+GGG | + | tig0022253:98174-98193 | Msa1398460:CDS | 40.0% | |
| TGCTGAGAAATCATTGAGTG+GGG | + | tig0022253:98175-98194 | Msa1398460:CDS | 40.0% | |
| CAAAACTCCGAGAGATAAGT+GGG | + | tig0022253:98198-98217 | Msa1398460:CDS | 40.0% | |
| TGTTACTCCCACTTATCTCT+CGG | - | tig0022253:98208-98227 | None:intergenic | 40.0% | |
| GGAGTAACATCTTTGCTGAT+GGG | + | tig0022253:98219-98238 | Msa1398460:CDS | 40.0% | |
| TAACATCTTTGCTGATGGGA+AGG | + | tig0022253:98223-98242 | Msa1398460:CDS | 40.0% | |
| !!! | GACCTTGTATTTCTGGGTTT+TGG | + | tig0022253:98401-98420 | Msa1398460:three_prime_UTR | 40.0% |
| TCCCAAAACCCAGAAATACA+AGG | - | tig0022253:98406-98425 | None:intergenic | 40.0% | |
| AGATCTGCAGTTGAAGTGTG+TGG | - | tig0022253:96055-96074 | None:intergenic | 45.0% | |
| GGAGCTGGAGAATCATTGAT+TGG | - | tig0022253:96097-96116 | None:intergenic | 45.0% | |
| ACTTACCTGATGAGAACGAG+TGG | - | tig0022253:96131-96150 | None:intergenic | 45.0% | |
| ! | TGAATTTTCAGCCGTCGGAT+GGG | + | tig0022253:96248-96267 | Msa1398460:intron | 45.0% |
| ATCAGTAAGGTGGTGTTTGG+TGG | + | tig0022253:96271-96290 | Msa1398460:CDS | 45.0% | |
| TGGTCAGGTTACTGATGAAG+AGG | + | tig0022253:96291-96310 | Msa1398460:CDS | 45.0% | |
| AAAAACACACAGACCGTGAC+AGG | - | tig0022253:96430-96449 | None:intergenic | 45.0% | |
| GTCTTGTGCTACCGCAATTT+AGG | - | tig0022253:96910-96929 | None:intergenic | 45.0% | |
| AACGTGCTACCGGACAATTT+AGG | - | tig0022253:96977-96996 | None:intergenic | 45.0% | |
| TGTAGCCAATGGAGAAGATG+AGG | + | tig0022253:97263-97282 | Msa1398460:CDS | 45.0% | |
| TACCTGGTACATGCGAATTC+CGG | - | tig0022253:97328-97347 | None:intergenic | 45.0% | |
| !!! | GGCAATGAAGCAGGCTTTTT+TGG | - | tig0022253:97496-97515 | None:intergenic | 45.0% |
| GCTTTCTGATGCAAAGTGCA+AGG | + | tig0022253:97582-97601 | Msa1398460:CDS | 45.0% | |
| CACCACCAGAAATCAAACCT+CGG | + | tig0022253:97632-97651 | Msa1398460:CDS | 45.0% | |
| ! | ATTGGCCGAGGTTTGATTTC+TGG | - | tig0022253:97640-97659 | None:intergenic | 45.0% |
| TCCAGTATGCGAGGAGTAAT+TGG | - | tig0022253:97658-97677 | None:intergenic | 45.0% | |
| CTCGCATACTGGAGTTGAAA+GGG | + | tig0022253:97665-97684 | Msa1398460:CDS | 45.0% | |
| GATCTCCATCACCCTAATCA+AGG | - | tig0022253:98043-98062 | None:intergenic | 45.0% | |
| GGAGATCAAGATGCTACTAC+AGG | + | tig0022253:98056-98075 | Msa1398460:CDS | 45.0% | |
| GCTGCTGAGAAATCATTGAG+TGG | + | tig0022253:98173-98192 | Msa1398460:CDS | 45.0% | |
| GCAAAACTCCGAGAGATAAG+TGG | + | tig0022253:98197-98216 | Msa1398460:CDS | 45.0% | |
| GGGAGTAACATCTTTGCTGA+TGG | + | tig0022253:98218-98237 | Msa1398460:CDS | 45.0% | |
| GAGTCTAGAGACTATCTAGG+CGG | + | tig0022253:98248-98267 | Msa1398460:CDS | 45.0% | |
| ATATGGAGAACACACCGGTC+AGG | + | tig0022253:96026-96045 | Msa1398460:exon | 50.0% | |
| GAAGTGTGTGGTTTCCTGAC+CGG | - | tig0022253:96043-96062 | None:intergenic | 50.0% | |
| TACCTGATGAGAACGAGTGG+CGG | - | tig0022253:96128-96147 | None:intergenic | 50.0% | |
| ! | GTGAATTTTCAGCCGTCGGA+TGG | + | tig0022253:96247-96266 | Msa1398460:intron | 50.0% |
| ACCTTACTGATCCCATCCGA+CGG | - | tig0022253:96262-96281 | None:intergenic | 50.0% | |
| GGGATCAGTAAGGTGGTGTT+TGG | + | tig0022253:96268-96287 | Msa1398460:CDS | 50.0% | |
| ! | TAAGGTGGTGTTTGGTGGTC+AGG | + | tig0022253:96276-96295 | Msa1398460:CDS | 50.0% |
| AACCGGAATTCGCATGTACC+AGG | + | tig0022253:97323-97342 | Msa1398460:CDS | 50.0% | |
| CAGTCATATCTCCTTTGGCG+AGG | + | tig0022253:97456-97475 | Msa1398460:CDS | 50.0% | |
| AACACTCTCTTCCTCGCCAA+AGG | - | tig0022253:97470-97489 | None:intergenic | 50.0% | |
| AAAGCCTGCTTCATTGCCTG+AGG | + | tig0022253:97498-97517 | Msa1398460:CDS | 50.0% | |
| GCAAAGTGCAAGGAGCTTAG+TGG | + | tig0022253:97592-97611 | Msa1398460:CDS | 50.0% | |
| !! | CGAGGTTTGATTTCTGGTGG+TGG | - | tig0022253:97634-97653 | None:intergenic | 50.0% |
| GCCAATTACTCCTCGCATAC+TGG | + | tig0022253:97654-97673 | Msa1398460:CDS | 50.0% | |
| CCTTTCAACTCCAGTATGCG+AGG | - | tig0022253:97667-97686 | None:intergenic | 50.0% | |
| CCTCGCATACTGGAGTTGAA+AGG | + | tig0022253:97664-97683 | Msa1398460:CDS | 50.0% | |
| ! | CTGGAGTTGAAAGGGAGCAT+AGG | + | tig0022253:97673-97692 | Msa1398460:CDS | 50.0% |
| ! | TTGAAAGGGAGCATAGGCCT+TGG | + | tig0022253:97679-97698 | Msa1398460:CDS | 50.0% |
| TAAAGGCGACTCTCCACCTT+TGG | + | tig0022253:98151-98170 | Msa1398460:CDS | 50.0% | |
| GATTTCTCAGCAGCCAAAGG+TGG | - | tig0022253:98167-98186 | None:intergenic | 50.0% | |
| CATCTTTGCTGATGGGAAGG+CGG | + | tig0022253:98226-98245 | Msa1398460:CDS | 50.0% | |
| GCGGAGTCTAGAGACTATCT+AGG | + | tig0022253:98245-98264 | Msa1398460:CDS | 50.0% | |
| ! | TGAGAACGAGTGGCGGAAGA+AGG | - | tig0022253:96121-96140 | None:intergenic | 55.0% |
| TTCCGCCACTCGTTCTCATC+AGG | + | tig0022253:96123-96142 | Msa1398460:CDS | 55.0% | |
| GTCGGATGGGATCAGTAAGG+TGG | + | tig0022253:96261-96280 | Msa1398460:CDS | 55.0% | |
| TGGGGCCTCATCTTCTCCAT+TGG | - | tig0022253:97271-97290 | None:intergenic | 55.0% | |
| GCGTGAGCTCAGTGGAACAA+TGG | + | tig0022253:97531-97550 | Msa1398460:CDS | 55.0% | |
| ! | GGCCGAGGTTTGATTTCTGG+TGG | - | tig0022253:97637-97656 | None:intergenic | 55.0% |
| ATGCGAGGAGTAATTGGCCG+AGG | - | tig0022253:97652-97671 | None:intergenic | 55.0% | |
| GAGACTATCTAGGCGGCGTA+CGG | + | tig0022253:98255-98274 | Msa1398460:CDS | 55.0% | |
| ! | GAACGAGTGGCGGAAGAAGG+AGG | - | tig0022253:96118-96137 | None:intergenic | 60.0% |
| GCCGTCGGATGGGATCAGTA+AGG | + | tig0022253:96258-96277 | Msa1398460:intron | 60.0% | |
| TGGAGAAGATGAGGCCCCAG+AGG | + | tig0022253:97272-97291 | Msa1398460:CDS | 60.0% | |
| GAAGATGAGGCCCCAGAGGA+TGG | + | tig0022253:97276-97295 | Msa1398460:CDS | 60.0% | |
| GTTGGCACTGCCATCCTCTG+GGG | - | tig0022253:97289-97308 | None:intergenic | 60.0% | |
| GGTTGGCACTGCCATCCTCT+GGG | - | tig0022253:97290-97309 | None:intergenic | 60.0% | |
| GCCTGCTTCATTGCCTGAGG+TGG | + | tig0022253:97501-97520 | Msa1398460:CDS | 60.0% | |
| GCCACCTCAGGCAATGAAGC+AGG | - | tig0022253:97505-97524 | None:intergenic | 60.0% | |
| TCCACTGAGCTCACGCTGCT+TGG | - | tig0022253:97527-97546 | None:intergenic | 60.0% | |
| ! | GTGGCGGAAGAAGGAGGAGC+TGG | - | tig0022253:96112-96131 | None:intergenic | 65.0% |
| ! | GGGTTGGCACTGCCATCCTC+TGG | - | tig0022253:97291-97310 | None:intergenic | 65.0% |
| TCACGCTGCTTGGCCACCTC+AGG | - | tig0022253:97517-97536 | None:intergenic | 65.0% | |
| GCCAAGCAGCGTGAGCTCAG+TGG | + | tig0022253:97523-97542 | Msa1398460:CDS | 65.0% | |
| ATGCTGCTCTCGCCACCAGG+CGG | - | tig0022253:98284-98303 | None:intergenic | 65.0% | |
| GCAATGCTGCTCTCGCCACC+AGG | - | tig0022253:98287-98306 | None:intergenic | 65.0% | |
| TGGCGAGAGCAGCATTGCGC+TGG | + | tig0022253:98289-98308 | Msa1398460:CDS | 65.0% | |
| GGCGTACGGAAGCCGCCTGG+TGG | + | tig0022253:98269-98288 | Msa1398460:CDS | 75.0% | |
| ! | GGCGGCGTACGGAAGCCGCC+TGG | + | tig0022253:98266-98285 | Msa1398460:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022253 | gene | 95793 | 98570 | 95793 | ID=Msa1398460;Name=Msa1398460 |
| tig0022253 | mRNA | 95793 | 98570 | 95793 | ID=Msa1398460-mRNA-1;Parent=Msa1398460;Name=Msa1398460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=235|1|1|1|1|1|5|254|287 |
| tig0022253 | exon | 95793 | 96144 | 95793 | ID=Msa1398460-mRNA-1:exon:16595;Parent=Msa1398460-mRNA-1 |
| tig0022253 | exon | 96259 | 96332 | 96259 | ID=Msa1398460-mRNA-1:exon:16596;Parent=Msa1398460-mRNA-1 |
| tig0022253 | exon | 97212 | 97344 | 97212 | ID=Msa1398460-mRNA-1:exon:16597;Parent=Msa1398460-mRNA-1 |
| tig0022253 | exon | 97439 | 97711 | 97439 | ID=Msa1398460-mRNA-1:exon:16598;Parent=Msa1398460-mRNA-1 |
| tig0022253 | exon | 98050 | 98570 | 98050 | ID=Msa1398460-mRNA-1:exon:16599;Parent=Msa1398460-mRNA-1 |
| tig0022253 | five_prime_UTR | 95793 | 96027 | 95793 | ID=Msa1398460-mRNA-1:five_prime_utr;Parent=Msa1398460-mRNA-1 |
| tig0022253 | CDS | 96028 | 96144 | 96028 | ID=Msa1398460-mRNA-1:cds;Parent=Msa1398460-mRNA-1 |
| tig0022253 | CDS | 96259 | 96332 | 96259 | ID=Msa1398460-mRNA-1:cds;Parent=Msa1398460-mRNA-1 |
| tig0022253 | CDS | 97212 | 97344 | 97212 | ID=Msa1398460-mRNA-1:cds;Parent=Msa1398460-mRNA-1 |
| tig0022253 | CDS | 97439 | 97711 | 97439 | ID=Msa1398460-mRNA-1:cds;Parent=Msa1398460-mRNA-1 |
| tig0022253 | CDS | 98050 | 98316 | 98050 | ID=Msa1398460-mRNA-1:cds;Parent=Msa1398460-mRNA-1 |
| tig0022253 | three_prime_UTR | 98317 | 98570 | 98317 | ID=Msa1398460-mRNA-1:three_prime_utr;Parent=Msa1398460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
