Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321490 | sp|G7LG31|RDN2_MEDTR | 98.611 | 360 | 5 | 0 | 1 | 360 | 1 | 360 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321490 | A0A072TQJ1 | 98.333 | 360 | 5 | 1 | 1 | 360 | 1 | 359 | 0.0 | 734 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017710 | Msa1321490 | 0.810378 | 1.187391e-50 | -8.615850e-47 |
| Msa0045620 | Msa1321490 | 0.825020 | 5.886973e-54 | -8.615850e-47 |
| Msa0059880 | Msa1321490 | 0.802890 | 4.525074e-49 | -8.615850e-47 |
| Msa0073270 | Msa1321490 | 0.800232 | 1.587294e-48 | -8.615850e-47 |
| Msa0085670 | Msa1321490 | 0.806209 | 9.191736e-50 | -8.615850e-47 |
| Msa0089540 | Msa1321490 | 0.820789 | 5.695923e-53 | -8.615850e-47 |
| Msa0099090 | Msa1321490 | -0.803683 | 3.100493e-49 | -8.615850e-47 |
| Msa0610190 | Msa1321490 | 0.803706 | 3.067820e-49 | -8.615850e-47 |
| Msa0614960 | Msa1321490 | 0.822230 | 2.646955e-53 | -8.615850e-47 |
| Msa0619300 | Msa1321490 | 0.805240 | 1.468618e-49 | -8.615850e-47 |
| Msa0623310 | Msa1321490 | 0.842426 | 2.604993e-58 | -8.615850e-47 |
| Msa0626980 | Msa1321490 | 0.812645 | 3.820127e-51 | -8.615850e-47 |
| Msa0627360 | Msa1321490 | 0.807520 | 4.856605e-50 | -8.615850e-47 |
| Msa0655370 | Msa1321490 | 0.809687 | 1.673062e-50 | -8.615850e-47 |
| Msa0659020 | Msa1321490 | -0.803248 | 3.817283e-49 | -8.615850e-47 |
| Msa0661330 | Msa1321490 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa0673940 | Msa1321490 | 0.821393 | 4.134704e-53 | -8.615850e-47 |
| Msa0676200 | Msa1321490 | 0.800715 | 1.265204e-48 | -8.615850e-47 |
| Msa0680450 | Msa1321490 | 0.804117 | 2.520019e-49 | -8.615850e-47 |
| Msa0685390 | Msa1321490 | -0.819025 | 1.442320e-52 | -8.615850e-47 |
| Msa0687220 | Msa1321490 | 0.820831 | 5.572194e-53 | -8.615850e-47 |
| Msa0699170 | Msa1321490 | 0.821390 | 4.141331e-53 | -8.615850e-47 |
| Msa0704690 | Msa1321490 | 0.818434 | 1.964061e-52 | -8.615850e-47 |
| Msa0732970 | Msa1321490 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
| Msa0754750 | Msa1321490 | 0.807733 | 4.375035e-50 | -8.615850e-47 |
| Msa0761830 | Msa1321490 | 0.831450 | 1.657564e-55 | -8.615850e-47 |
| Msa0773960 | Msa1321490 | 0.802670 | 5.026062e-49 | -8.615850e-47 |
| Msa0795210 | Msa1321490 | 0.802161 | 6.396224e-49 | -8.615850e-47 |
| Msa0804170 | Msa1321490 | 0.806013 | 1.010950e-49 | -8.615850e-47 |
| Msa0812610 | Msa1321490 | 0.805885 | 1.075547e-49 | -8.615850e-47 |
| Msa0828350 | Msa1321490 | 0.802845 | 4.624748e-49 | -8.615850e-47 |
| Msa0842180 | Msa1321490 | 0.831971 | 1.233368e-55 | -8.615850e-47 |
| Msa0121320 | Msa1321490 | 0.823552 | 1.302389e-53 | -8.615850e-47 |
| Msa0130360 | Msa1321490 | 0.803669 | 3.122196e-49 | -8.615850e-47 |
| Msa0143830 | Msa1321490 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
| Msa0147680 | Msa1321490 | 0.808762 | 2.640777e-50 | -8.615850e-47 |
| Msa0166180 | Msa1321490 | 0.818930 | 1.516136e-52 | -8.615850e-47 |
| Msa0174990 | Msa1321490 | 0.802966 | 4.365839e-49 | -8.615850e-47 |
| Msa0235080 | Msa1321490 | 0.852448 | 4.587151e-61 | -8.615850e-47 |
| Msa1277300 | Msa1321490 | 0.816083 | 6.637994e-52 | -8.615850e-47 |
| Msa1309040 | Msa1321490 | 0.803355 | 3.627111e-49 | -8.615850e-47 |
| Msa1321490 | Msa1328860 | 0.813173 | 2.926781e-51 | -8.615850e-47 |
| Msa1321490 | Msa1334560 | 0.811651 | 6.293938e-51 | -8.615850e-47 |
| Msa1321490 | Msa1342760 | 0.806267 | 8.936109e-50 | -8.615850e-47 |
| Msa1321490 | Msa1347610 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa1321490 | Msa1371800 | 0.827217 | 1.767519e-54 | -8.615850e-47 |
| Msa1321490 | Msa1376310 | 0.829845 | 4.098842e-55 | -8.615850e-47 |
| Msa1321490 | Msa1379940 | 0.809315 | 2.011048e-50 | -8.615850e-47 |
| Msa1321490 | Msa1413020 | 0.810559 | 1.085096e-50 | -8.615850e-47 |
| Msa1321490 | Msa1454340 | 0.830524 | 2.798342e-55 | -8.615850e-47 |
| Msa0389700 | Msa1321490 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0416390 | Msa1321490 | 0.807458 | 5.005465e-50 | -8.615850e-47 |
| Msa0417850 | Msa1321490 | -0.809785 | 1.593329e-50 | -8.615850e-47 |
| Msa0444200 | Msa1321490 | 0.809808 | 1.575860e-50 | -8.615850e-47 |
| Msa0463080 | Msa1321490 | 0.804537 | 2.059578e-49 | -8.615850e-47 |
| Msa0476730 | Msa1321490 | -0.800340 | 1.509302e-48 | -8.615850e-47 |
| Msa0982560 | Msa1321490 | 0.806583 | 7.664865e-50 | -8.615850e-47 |
| Msa1026710 | Msa1321490 | 0.828025 | 1.130665e-54 | -8.615850e-47 |
| Msa1093190 | Msa1321490 | -0.812725 | 3.669405e-51 | -8.615850e-47 |
| Msa0242720 | Msa1321490 | 0.811728 | 6.053887e-51 | -8.615850e-47 |
| Msa0273360 | Msa1321490 | 0.830108 | 3.536038e-55 | -8.615850e-47 |
| Msa0300670 | Msa1321490 | -0.803301 | 3.722222e-49 | -8.615850e-47 |
| Msa0307430 | Msa1321490 | 0.822757 | 1.997253e-53 | -8.615850e-47 |
| Msa0313620 | Msa1321490 | 0.820297 | 7.387995e-53 | -8.615850e-47 |
| Msa1127200 | Msa1321490 | 0.815510 | 8.909882e-52 | -8.615850e-47 |
| Msa1130770 | Msa1321490 | 0.807680 | 4.490644e-50 | -8.615850e-47 |
| Msa1146980 | Msa1321490 | 0.803283 | 3.753647e-49 | -8.615850e-47 |
| Msa1165460 | Msa1321490 | 0.801941 | 7.098108e-49 | -8.615850e-47 |
| Msa1186670 | Msa1321490 | 0.948122 | 1.763611e-106 | -8.615850e-47 |
| Msa1206030 | Msa1321490 | 0.808752 | 2.654066e-50 | -8.615850e-47 |
| Msa1220580 | Msa1321490 | 0.810714 | 1.004909e-50 | -8.615850e-47 |
| Msa0484410 | Msa1321490 | 0.811710 | 6.108371e-51 | -8.615850e-47 |
| Msa0528310 | Msa1321490 | 0.809579 | 1.764868e-50 | -8.615850e-47 |
| Msa0530660 | Msa1321490 | 0.809727 | 1.640374e-50 | -8.615850e-47 |
| Msa0537210 | Msa1321490 | 0.802180 | 6.341494e-49 | -8.615850e-47 |
| Msa0561830 | Msa1321490 | 0.811320 | 7.424490e-51 | -8.615850e-47 |
| Msa0566460 | Msa1321490 | 0.806517 | 7.914489e-50 | -8.615850e-47 |
| Msa0583390 | Msa1321490 | 0.802478 | 5.504333e-49 | -8.615850e-47 |
| Msa0587180 | Msa1321490 | 0.820301 | 7.372486e-53 | -8.615850e-47 |
| Msa0588500 | Msa1321490 | 0.801791 | 7.623028e-49 | -8.615850e-47 |
| Msa0852890 | Msa1321490 | 0.826333 | 2.874311e-54 | -8.615850e-47 |
| Msa0869660 | Msa1321490 | 0.809830 | 1.558914e-50 | -8.615850e-47 |
| Msa0871420 | Msa1321490 | 0.828452 | 8.922535e-55 | -8.615850e-47 |
| Msa0902340 | Msa1321490 | 0.800139 | 1.658265e-48 | -8.615850e-47 |
| Msa0936630 | Msa1321490 | 0.818921 | 1.522892e-52 | -8.615850e-47 |
| Msa0965800 | Msa1321490 | 0.817925 | 2.560196e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321490 | MtrunA17_Chr8g0353191 | 98.611 | 360 | 5 | 0 | 1 | 360 | 1 | 360 | 0.0 | 740 |
| Msa1321490 | MtrunA17_Chr5g0441831 | 70.833 | 360 | 93 | 2 | 1 | 360 | 7 | 354 | 0.0 | 548 |
| Msa1321490 | MtrunA17_Chr1g0149621 | 62.772 | 368 | 120 | 5 | 1 | 359 | 1 | 360 | 3.07e-169 | 476 |
| Msa1321490 | MtrunA17_Chr7g0228921 | 24.908 | 273 | 159 | 13 | 66 | 317 | 395 | 642 | 1.02e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321490 | AT5G13500.2 | 76.111 | 360 | 84 | 1 | 1 | 360 | 1 | 358 | 0.0 | 576 |
| Msa1321490 | AT5G13500.3 | 76.111 | 360 | 84 | 1 | 1 | 360 | 1 | 358 | 0.0 | 576 |
| Msa1321490 | AT5G13500.1 | 76.111 | 360 | 84 | 1 | 1 | 360 | 1 | 358 | 0.0 | 576 |
| Msa1321490 | AT2G25260.1 | 70.530 | 302 | 89 | 0 | 58 | 359 | 57 | 358 | 2.85e-169 | 476 |
| Msa1321490 | AT5G25265.1 | 69.497 | 318 | 92 | 2 | 47 | 359 | 49 | 366 | 7.79e-169 | 475 |
| Msa1321490 | AT3G01720.1 | 23.051 | 295 | 187 | 10 | 41 | 317 | 370 | 642 | 1.16e-11 | 66.6 |
Find 116 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCTTGAATGATATTT+TGG | 0.156597 | 8_4:+27318392 | Msa1321490:three_prime_UTR |
| CATCCATGTAGGAGCAATTT+TGG | 0.157802 | 8_4:-27316338 | None:intergenic |
| TTCCTTTGCTACATATAATT+TGG | 0.195551 | 8_4:+27314211 | Msa1321490:CDS |
| TGTAGACATACCACACTTTC+AGG | 0.233658 | 8_4:-27317136 | None:intergenic |
| ATTTAAATAGTTGTATTAAA+AGG | 0.253618 | 8_4:-27318343 | None:intergenic |
| TCTACCTTTCTGATAATTAC+AGG | 0.273833 | 8_4:-27315830 | None:intergenic |
| TTTGTGTTCTTCACATGTTC+AGG | 0.290321 | 8_4:-27314317 | None:intergenic |
| CCGGAGACCGACAAAGCTTT+TGG | 0.293985 | 8_4:+27316388 | Msa1321490:CDS |
| CTGATGATATGTTTGGTTCT+TGG | 0.302314 | 8_4:+27314185 | Msa1321490:CDS |
| GAATTGACTTACGGTAAAAT+TGG | 0.313648 | 8_4:+27317037 | Msa1321490:CDS |
| GCATTGCCATTTGTTGTAGA+TGG | 0.329461 | 8_4:-27314384 | None:intergenic |
| TACATTATTCATTATACTTA+CGG | 0.354634 | 8_4:+27316758 | Msa1321490:CDS |
| ACCATTACTGATGATATGTT+TGG | 0.354825 | 8_4:+27314178 | Msa1321490:CDS |
| TGTTCAGGCATCTCAACAAT+AGG | 0.356782 | 8_4:-27314302 | None:intergenic |
| GGAGGTAATGGCAAGTTTCT+TGG | 0.358268 | 8_4:-27317103 | None:intergenic |
| TATTTACAATGTATCCCAAT+TGG | 0.363051 | 8_4:-27318172 | None:intergenic |
| ATTTACAATGTATCCCAATT+GGG | 0.366685 | 8_4:-27318171 | None:intergenic |
| TTGATATCTTTCTGTCTGAT+AGG | 0.369093 | 8_4:+27314135 | Msa1321490:five_prime_UTR |
| TGTACGCCCTCTTCCCAATC+TGG | 0.371070 | 8_4:+27315679 | Msa1321490:CDS |
| ACATTATTCATTATACTTAC+GGG | 0.376342 | 8_4:+27316759 | Msa1321490:CDS |
| CCAAAAGCTTTGTCGGTCTC+CGG | 0.381162 | 8_4:-27316388 | None:intergenic |
| CCTCTTCCCAATCTGGCATT+TGG | 0.385015 | 8_4:+27315686 | Msa1321490:CDS |
| AATGTACTTGTTGAAAGTTT+CGG | 0.395815 | 8_4:-27316741 | None:intergenic |
| CTTTAAATACCATGATGAAT+AGG | 0.412610 | 8_4:-27318206 | None:intergenic |
| CTCACCCTGTCTAGACCTTC+CGG | 0.417765 | 8_4:-27314542 | None:intergenic |
| TGGAAAGGCTGACAACTTGA+TGG | 0.418539 | 8_4:+27314487 | Msa1321490:CDS |
| TAATACAACTATTTAAATGA+AGG | 0.423035 | 8_4:+27318348 | Msa1321490:three_prime_UTR |
| CACCCATCCAAAAGCTTTGT+CGG | 0.426464 | 8_4:-27316395 | None:intergenic |
| CTTCTGCTAACATCCCCAAT+TGG | 0.429086 | 8_4:+27318157 | Msa1321490:CDS |
| AAGGTGTATAGTGAGGTATT+TGG | 0.429135 | 8_4:-27318324 | None:intergenic |
| TCAGGTGACTCTTGTAAAGA+TGG | 0.438160 | 8_4:+27318125 | Msa1321490:intron |
| TGTCGTCGTTGATCCTCTTC+CGG | 0.440206 | 8_4:+27314523 | Msa1321490:CDS |
| CTTTGTTCAGTGGCTGGAAA+AGG | 0.444264 | 8_4:+27315527 | Msa1321490:CDS |
| GTGACAATGATAATCCACTA+TGG | 0.451326 | 8_4:+27314233 | Msa1321490:CDS |
| CTGATGCCATCTACAACAAA+TGG | 0.456001 | 8_4:+27314378 | Msa1321490:CDS |
| TTCTGCTAACATCCCCAATT+GGG | 0.459913 | 8_4:+27318158 | Msa1321490:CDS |
| ATGGGCCTTTGTTCAGTGGC+TGG | 0.460296 | 8_4:+27315521 | Msa1321490:CDS |
| GCGAAAAGACTTCATGCTAC+AGG | 0.466953 | 8_4:+27316577 | Msa1321490:CDS |
| GGAACACCTGGAGGAGGTAA+TGG | 0.470362 | 8_4:-27317115 | None:intergenic |
| ATCGGATCAATATTTGTAAC+CGG | 0.473029 | 8_4:-27315797 | None:intergenic |
| CTCTTCCGGAAGGTCTAGAC+AGG | 0.482298 | 8_4:+27314537 | Msa1321490:CDS |
| TTGAAAGTTTCGGTATCCCA+TGG | 0.484134 | 8_4:-27316731 | None:intergenic |
| AATGGCAAGTTTCTTGGTGG+TGG | 0.485716 | 8_4:-27317097 | None:intergenic |
| TTGCCAAAATTGCTCCTACA+TGG | 0.492892 | 8_4:+27316335 | Msa1321490:CDS |
| CCAAATGCCAGATTGGGAAG+AGG | 0.493455 | 8_4:-27315686 | None:intergenic |
| GAATATGTCTCACGCCATGC+AGG | 0.497143 | 8_4:-27316553 | None:intergenic |
| CTGTCTAGACCTTCCGGAAG+AGG | 0.500411 | 8_4:-27314536 | None:intergenic |
| CAAAAGCTTTGTCGGTCTCC+GGG | 0.502506 | 8_4:-27316387 | None:intergenic |
| CTCTCTGTCTGTTGAAACAA+AGG | 0.505749 | 8_4:+27312853 | Msa1321490:five_prime_UTR |
| GTAACCGGTCCATTCTCCTC+AGG | 0.508925 | 8_4:-27315782 | None:intergenic |
| TGAAAGTTTCGGTATCCCAT+GGG | 0.514546 | 8_4:-27316730 | None:intergenic |
| AAGTATTATCCTGAGGAGAA+TGG | 0.515266 | 8_4:+27315773 | Msa1321490:CDS |
| GCTTGTTCTATCAAGAATTG+AGG | 0.521680 | 8_4:+27314091 | Msa1321490:five_prime_UTR |
| GTTCAGGCATCTCAACAATA+GGG | 0.522658 | 8_4:-27314301 | None:intergenic |
| AATCCTCCCATCTCTGATCC+AGG | 0.523340 | 8_4:-27314446 | None:intergenic |
| TGGGGACGACGGAGGGAACA+CGG | 0.531083 | 8_4:-27312815 | None:intergenic |
| GAGTCTACCTGGATCAGAGA+TGG | 0.533196 | 8_4:+27314439 | Msa1321490:CDS |
| TTCTCCTGTAATTATCAGAA+AGG | 0.533563 | 8_4:+27315826 | Msa1321490:CDS |
| AGAGGATCAACGACGACAGT+AGG | 0.536647 | 8_4:-27314518 | None:intergenic |
| AACTATCCGATGATCCATAG+TGG | 0.537106 | 8_4:-27314247 | None:intergenic |
| GTTCCCTCCGTCGTCCCCAT+CGG | 0.539278 | 8_4:+27312819 | Msa1321490:five_prime_UTR |
| AATGCCGTATCATGTATTAC+TGG | 0.539444 | 8_4:+27314402 | Msa1321490:CDS |
| AAGAAGCAAAGGAGTCTACC+TGG | 0.540779 | 8_4:+27314428 | Msa1321490:CDS |
| GACCATGGGCCTTTGTTCAG+TGG | 0.540787 | 8_4:+27315517 | Msa1321490:CDS |
| AACTTGCCATTACCTCCTCC+AGG | 0.543731 | 8_4:+27317109 | Msa1321490:CDS |
| CACCAAATTATATGTAGCAA+AGG | 0.545736 | 8_4:-27314213 | None:intergenic |
| GTTACAAATATTGATCCGAT+TGG | 0.548705 | 8_4:+27315800 | Msa1321490:CDS |
| AGAGAGAGAGATTCTCCGAT+GGG | 0.549034 | 8_4:-27312834 | None:intergenic |
| TATACCAGTAATACATGATA+CGG | 0.549976 | 8_4:-27314406 | None:intergenic |
| ACCAAACATATCATCAGTAA+TGG | 0.550380 | 8_4:-27314179 | None:intergenic |
| TCTCCGATGGGGACGACGGA+GGG | 0.553306 | 8_4:-27312822 | None:intergenic |
| GTCGTTGATCCTCTTCCGGA+AGG | 0.555563 | 8_4:+27314527 | Msa1321490:CDS |
| CAAATGCCAGATTGGGAAGA+GGG | 0.557171 | 8_4:-27315685 | None:intergenic |
| ACCACACTTTCAGGAACACC+TGG | 0.557951 | 8_4:-27317127 | None:intergenic |
| ACTCAGGGTGAATTGACTTA+CGG | 0.559352 | 8_4:+27317028 | Msa1321490:intron |
| TATTTCTATGAAGATGAAAG+AGG | 0.560544 | 8_4:+27316363 | Msa1321490:CDS |
| GCTGTTGCATCTGCCCTGCA+TGG | 0.561601 | 8_4:+27316539 | Msa1321490:CDS |
| AGATTCTCCGATGGGGACGA+CGG | 0.562487 | 8_4:-27312826 | None:intergenic |
| TCCAGGTGTTCCTGAAAGTG+TGG | 0.563076 | 8_4:+27317126 | Msa1321490:CDS |
| AAATACCATGATGAATAGGA+AGG | 0.571694 | 8_4:-27318202 | None:intergenic |
| TTTACAATGTATCCCAATTG+GGG | 0.573299 | 8_4:-27318170 | None:intergenic |
| GATAATCCACTATGGATCAT+CGG | 0.574800 | 8_4:+27314241 | Msa1321490:CDS |
| TATGAAGATGAAAGAGGACC+CGG | 0.576291 | 8_4:+27316369 | Msa1321490:CDS |
| GGTAATGGCAAGTTTCTTGG+TGG | 0.577952 | 8_4:-27317100 | None:intergenic |
| GTTCTATCAAGAATTGAGGA+AGG | 0.585744 | 8_4:+27314095 | Msa1321490:five_prime_UTR |
| ATTACAGGAGAATTGCCAAT+CGG | 0.588392 | 8_4:-27315815 | None:intergenic |
| AGTCTACCTGGATCAGAGAT+GGG | 0.590857 | 8_4:+27314440 | Msa1321490:CDS |
| TCTTGTAAAGATGGTGAATG+AGG | 0.590924 | 8_4:+27318134 | Msa1321490:CDS |
| GATAGTTTAGCTACCGAGGA+TGG | 0.594389 | 8_4:+27314263 | Msa1321490:CDS |
| CGGGTGTGACTACAATATGA+AGG | 0.595934 | 8_4:+27316778 | Msa1321490:CDS |
| ATTACTGGTATAAGAAGCAA+AGG | 0.598311 | 8_4:+27314417 | Msa1321490:CDS |
| GCGGTCAACGCAATATGAAA+CGG | 0.598357 | 8_4:-27314353 | None:intergenic |
| AGTTTAGCTACCGAGGATGG+TGG | 0.599053 | 8_4:+27314266 | Msa1321490:CDS |
| TAATGGTGAAGCTCGTGCCA+TGG | 0.610525 | 8_4:-27314162 | None:intergenic |
| CTTTCAGGAACACCTGGAGG+AGG | 0.611273 | 8_4:-27317121 | None:intergenic |
| TTCTCCGATGGGGACGACGG+AGG | 0.613605 | 8_4:-27312823 | None:intergenic |
| GTTGTAGATGGCATCAGTTG+CGG | 0.614966 | 8_4:-27314372 | None:intergenic |
| GAAAGTTTCGGTATCCCATG+GGG | 0.618074 | 8_4:-27316729 | None:intergenic |
| TTATCCTGAGGAGAATGGAC+CGG | 0.623990 | 8_4:+27315778 | Msa1321490:CDS |
| CGTCGTTCTGAATAGACCAT+GGG | 0.624386 | 8_4:+27315503 | Msa1321490:CDS |
| AGCCACTGAACAAAGGCCCA+TGG | 0.626962 | 8_4:-27315519 | None:intergenic |
| AATATGTCTCACGCCATGCA+GGG | 0.632298 | 8_4:-27316552 | None:intergenic |
| ATCGGATAGTTTAGCTACCG+AGG | 0.633568 | 8_4:+27314259 | Msa1321490:CDS |
| GTATTAAAAGGTGTATAGTG+AGG | 0.636150 | 8_4:-27318331 | None:intergenic |
| ACGTCGTTCTGAATAGACCA+TGG | 0.640320 | 8_4:+27315502 | Msa1321490:CDS |
| ATAGAAATATTCATCCATGT+AGG | 0.650200 | 8_4:-27316349 | None:intergenic |
| CTTACGGTAAAATTGGTGAG+TGG | 0.653033 | 8_4:+27317044 | Msa1321490:CDS |
| AAAGTTTCGGTATCCCATGG+GGG | 0.674004 | 8_4:-27316728 | None:intergenic |
| CTACCTGGATCAGAGATGGG+AGG | 0.675794 | 8_4:+27314443 | Msa1321490:CDS |
| GAGAGAGAGATTCTCCGATG+GGG | 0.686852 | 8_4:-27312833 | None:intergenic |
| TGTAAGGAAGTATTATCCTG+AGG | 0.689724 | 8_4:+27315766 | Msa1321490:CDS |
| TCTGTCTGATAGGAAGACCA+TGG | 0.702643 | 8_4:+27314145 | Msa1321490:exon |
| ACACTTTCAGGAACACCTGG+AGG | 0.715454 | 8_4:-27317124 | None:intergenic |
| TCTTCCGGAAGGTCTAGACA+GGG | 0.732437 | 8_4:+27314538 | Msa1321490:CDS |
| GGACGACGGAGGGAACACGG+CGG | 0.739182 | 8_4:-27312812 | None:intergenic |
| GACAAAAGATCACATCTGCG+AGG | 0.743493 | 8_4:+27317073 | Msa1321490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTCAAATGTTAAAA+TGG | - | chr8_4:27314965-27314984 | None:intergenic | 10.0% |
| !!! | TTTTAACATTTGAAAATAAA+AGG | + | chr8_4:27314965-27314984 | Msa1321490:intron | 10.0% |
| !!! | AAATACATTTTATAAATGAT+TGG | - | chr8_4:27315282-27315301 | None:intergenic | 10.0% |
| !! | TTTATAAAATGTATTTGTTT+AGG | + | chr8_4:27315286-27315305 | Msa1321490:intron | 10.0% |
| !!! | CATATTTTTTATTTTTTTTC+AGG | + | chr8_4:27316306-27316325 | Msa1321490:intron | 10.0% |
| !! | ATTTAAATAGTTGTATTAAA+AGG | - | chr8_4:27318346-27318365 | None:intergenic | 10.0% |
| !!! | TTTAATTGTTTTTAGCTAAT+AGG | - | chr8_4:27312784-27312803 | None:intergenic | 15.0% |
| !! | ATACAAATTAAAACAGAAAA+TGG | - | chr8_4:27313071-27313090 | None:intergenic | 15.0% |
| !!! | ATGGATTTATTTCATTTTTT+TGG | + | chr8_4:27313502-27313521 | Msa1321490:intron | 15.0% |
| !!! | AAATATTTTGTGTATCAATT+TGG | + | chr8_4:27315252-27315271 | Msa1321490:intron | 15.0% |
| !! | TAAATCAATCTATCAATAAT+AGG | - | chr8_4:27315415-27315434 | None:intergenic | 15.0% |
| !! | ATTTAAATTGTATTTACTGA+TGG | - | chr8_4:27315448-27315467 | None:intergenic | 15.0% |
| !!! | ACAATTTTTTCATTTTCTTT+AGG | - | chr8_4:27315749-27315768 | None:intergenic | 15.0% |
| !! | AAGAAAATGAAAAAATTGTA+AGG | + | chr8_4:27315750-27315769 | Msa1321490:CDS | 15.0% |
| !! | AAACTTCTATTTAATTGAAT+TGG | + | chr8_4:27315864-27315883 | Msa1321490:intron | 15.0% |
| !! | TACATTATTCATTATACTTA+CGG | + | chr8_4:27316758-27316777 | Msa1321490:CDS | 15.0% |
| !! | TTTACGAAATTTATCTTATT+AGG | + | chr8_4:27317172-27317191 | Msa1321490:intron | 15.0% |
| !! | ACAATTAGATAATTATACAT+GGG | - | chr8_4:27317317-27317336 | None:intergenic | 15.0% |
| !! | ATAATTGTATAGTATATAGA+TGG | + | chr8_4:27317956-27317975 | Msa1321490:intron | 15.0% |
| !! | TAATTGTATAGTATATAGAT+GGG | + | chr8_4:27317957-27317976 | Msa1321490:intron | 15.0% |
| !! | ACAAGAGAAAAATAAAATTA+TGG | - | chr8_4:27318273-27318292 | None:intergenic | 15.0% |
| !! | TAATACAACTATTTAAATGA+AGG | + | chr8_4:27318348-27318367 | Msa1321490:three_prime_UTR | 15.0% |
| !! | CACTAAAACATATTAAAAAG+AGG | - | chr8_4:27313204-27313223 | None:intergenic | 20.0% |
| !! | AAGAATGATTAACACTTTAT+AGG | + | chr8_4:27313384-27313403 | Msa1321490:intron | 20.0% |
| !! | AATAAGAAACAGTTATATTG+CGG | + | chr8_4:27313890-27313909 | Msa1321490:intron | 20.0% |
| !! | TGCTAGAATCAAAATTTAAA+TGG | - | chr8_4:27313959-27313978 | None:intergenic | 20.0% |
| !! | ATACTATTAATTCAATAAGC+TGG | - | chr8_4:27314632-27314651 | None:intergenic | 20.0% |
| !!! | TTGTAGTTTGTTGTTATAAT+TGG | + | chr8_4:27314651-27314670 | Msa1321490:intron | 20.0% |
| !! | AGTTTATCAAAATAGCTTAT+GGG | + | chr8_4:27314738-27314757 | Msa1321490:intron | 20.0% |
| !! | ATTTGAAAATAAAAGGAATG+CGG | + | chr8_4:27314972-27314991 | Msa1321490:intron | 20.0% |
| !! | TAAAATCCGACAAAATAATT+TGG | + | chr8_4:27315025-27315044 | Msa1321490:intron | 20.0% |
| !!! | TTGATGCAGATATATTTTAA+TGG | + | chr8_4:27315637-27315656 | Msa1321490:intron | 20.0% |
| !!! | GATTCTTTTTGTTATTGAAA+TGG | + | chr8_4:27316459-27316478 | Msa1321490:intron | 20.0% |
| !! | ACATTATTCATTATACTTAC+GGG | + | chr8_4:27316759-27316778 | Msa1321490:CDS | 20.0% |
| !! | AAATTATGGTCTTTGAATAA+TGG | + | chr8_4:27316831-27316850 | Msa1321490:intron | 20.0% |
| !!! | ATAGATTTCATTTTTCTTTC+TGG | + | chr8_4:27316979-27316998 | Msa1321490:intron | 20.0% |
| !! | AATATAGTTTCATAATACTC+AGG | + | chr8_4:27317012-27317031 | Msa1321490:intron | 20.0% |
| !! | ATATAGTTTCATAATACTCA+GGG | + | chr8_4:27317013-27317032 | Msa1321490:intron | 20.0% |
| !! | CACAATTAGATAATTATACA+TGG | - | chr8_4:27317318-27317337 | None:intergenic | 20.0% |
| !! | AAAAATATCTTACTTGACAA+TGG | - | chr8_4:27317842-27317861 | None:intergenic | 20.0% |
| !!! | GATATTCTTGAATGATATTT+TGG | + | chr8_4:27318392-27318411 | Msa1321490:three_prime_UTR | 20.0% |
| ! | AAAGGAAATGGATGAAATTA+CGG | - | chr8_4:27313041-27313060 | None:intergenic | 25.0% |
| ! | AATGGAAAATTGAAAGGAAA+TGG | - | chr8_4:27313053-27313072 | None:intergenic | 25.0% |
| ! | ACAGAAAATGGAAAATTGAA+AGG | - | chr8_4:27313059-27313078 | None:intergenic | 25.0% |
| ! | AAGATTCTGTTCTTAATGTT+TGG | + | chr8_4:27313226-27313245 | Msa1321490:intron | 25.0% |
| !! | GAAATAGTTGATTGTTGATT+AGG | + | chr8_4:27313423-27313442 | Msa1321490:intron | 25.0% |
| ! | TCTTGGCATTATTTAATTGA+TGG | + | chr8_4:27313483-27313502 | Msa1321490:intron | 25.0% |
| !!! | CTTCATATTTTGAAGAATTG+CGG | + | chr8_4:27313592-27313611 | Msa1321490:intron | 25.0% |
| ! | AAACTATAAGAGAAACTATC+AGG | + | chr8_4:27313734-27313753 | Msa1321490:intron | 25.0% |
| !! | TAACGAGTTGGATAAAAATA+TGG | + | chr8_4:27313771-27313790 | Msa1321490:intron | 25.0% |
| !! | TGGTTTTTGATAGAACATTA+TGG | + | chr8_4:27313791-27313810 | Msa1321490:intron | 25.0% |
| ! | AAATTTAAATGGCTAGACTA+GGG | - | chr8_4:27313948-27313967 | None:intergenic | 25.0% |
| ! | AAAATTTAAATGGCTAGACT+AGG | - | chr8_4:27313949-27313968 | None:intergenic | 25.0% |
| !!! | TTGATTTTTTGATGCACTAA+AGG | + | chr8_4:27314013-27314032 | Msa1321490:intron | 25.0% |
| !!! | TGATTTTTTGATGCACTAAA+GGG | + | chr8_4:27314014-27314033 | Msa1321490:intron | 25.0% |
| ! | TTCCTTTGCTACATATAATT+TGG | + | chr8_4:27314211-27314230 | Msa1321490:CDS | 25.0% |
| ! | TATACCAGTAATACATGATA+CGG | - | chr8_4:27314409-27314428 | None:intergenic | 25.0% |
| !! | TTCACTAGAATTTTACATTC+TGG | + | chr8_4:27314467-27314486 | Msa1321490:CDS | 25.0% |
| !!! | TAGAATTTTACATTCTGGAA+AGG | + | chr8_4:27314472-27314491 | Msa1321490:CDS | 25.0% |
| !! | AAAAGTATAACTGAAAGTCA+TGG | - | chr8_4:27314576-27314595 | None:intergenic | 25.0% |
| !! | TTGTTATAATTGGTCTGTTT+GGG | + | chr8_4:27314661-27314680 | Msa1321490:intron | 25.0% |
| ! | GAGTTTATCAAAATAGCTTA+TGG | + | chr8_4:27314737-27314756 | Msa1321490:intron | 25.0% |
| !! | ATAAGCACTTTTATGATAAG+TGG | + | chr8_4:27314868-27314887 | Msa1321490:intron | 25.0% |
| !! | ATGTTAAAATGGACTTTAAC+TGG | - | chr8_4:27314954-27314973 | None:intergenic | 25.0% |
| !!! | GCAATACCAAATTATTTTGT+CGG | - | chr8_4:27315034-27315053 | None:intergenic | 25.0% |
| ! | GTATTGCTGAAATAATTCAA+GGG | + | chr8_4:27315047-27315066 | Msa1321490:intron | 25.0% |
| ! | AGATAGAAATAGTATAAGCT+CGG | + | chr8_4:27315195-27315214 | Msa1321490:intron | 25.0% |
| ! | TATTGCAAAGTTTAGTGTTA+AGG | + | chr8_4:27315218-27315237 | Msa1321490:intron | 25.0% |
| ! | ATAATAGGAGAATCTTAACA+TGG | - | chr8_4:27315400-27315419 | None:intergenic | 25.0% |
| ! | AACTAAAACATAGATCACTT+AGG | - | chr8_4:27315583-27315602 | None:intergenic | 25.0% |
| ! | TTAGGCTTAATGTAGAAAAA+TGG | - | chr8_4:27315731-27315750 | None:intergenic | 25.0% |
| ! | GCAACAATAACTGATAAAAT+TGG | - | chr8_4:27315951-27315970 | None:intergenic | 25.0% |
| ! | CCTGTAATAATTTGAGAAAA+TGG | - | chr8_4:27316079-27316098 | None:intergenic | 25.0% |
| !! | CCATTTTCTCAAATTATTAC+AGG | + | chr8_4:27316076-27316095 | Msa1321490:intron | 25.0% |
| ! | ATAGAAATATTCATCCATGT+AGG | - | chr8_4:27316352-27316371 | None:intergenic | 25.0% |
| !! | TATTTCTATGAAGATGAAAG+AGG | + | chr8_4:27316363-27316382 | Msa1321490:CDS | 25.0% |
| !! | TGACATTGTGTTATGTATTT+TGG | + | chr8_4:27316499-27316518 | Msa1321490:intron | 25.0% |
| ! | TATAATGTTATCAGCTCAAA+TGG | + | chr8_4:27316646-27316665 | Msa1321490:intron | 25.0% |
| ! | AGAAAAGTAAAATCAGAGTT+GGG | - | chr8_4:27316691-27316710 | None:intergenic | 25.0% |
| ! | AAGAAAAGTAAAATCAGAGT+TGG | - | chr8_4:27316692-27316711 | None:intergenic | 25.0% |
| !! | AATGTACTTGTTGAAAGTTT+CGG | - | chr8_4:27316744-27316763 | None:intergenic | 25.0% |
| !! | AATTTTTCCATTCAAGGATT+GGG | - | chr8_4:27316816-27316835 | None:intergenic | 25.0% |
| !! | TAATTTTTCCATTCAAGGAT+TGG | - | chr8_4:27316817-27316836 | None:intergenic | 25.0% |
| ! | ATCCTTGAATGGAAAAATTA+TGG | + | chr8_4:27316817-27316836 | Msa1321490:intron | 25.0% |
| !!! | AAATCAAGAAGCTTTAAGAA+GGG | - | chr8_4:27316883-27316902 | None:intergenic | 25.0% |
| !!! | AAAATCAAGAAGCTTTAAGA+AGG | - | chr8_4:27316884-27316903 | None:intergenic | 25.0% |
| ! | AATTATAGTATCCTAATGTC+AGG | - | chr8_4:27317371-27317390 | None:intergenic | 25.0% |
| ! | GAGGATAAAAGCAAAATTAT+GGG | - | chr8_4:27317480-27317499 | None:intergenic | 25.0% |
| ! | TGAGGATAAAAGCAAAATTA+TGG | - | chr8_4:27317481-27317500 | None:intergenic | 25.0% |
| !! | TTGTTGAAGTTATGAGATTT+TGG | + | chr8_4:27317904-27317923 | Msa1321490:intron | 25.0% |
| !! | GTTATGAGATTTTGGATAAA+AGG | + | chr8_4:27317912-27317931 | Msa1321490:intron | 25.0% |
| ! | CATTATAGCAAACAAATAAC+AGG | - | chr8_4:27318102-27318121 | None:intergenic | 25.0% |
| !!! | TTGTTTGCTATAATGTTTTC+AGG | + | chr8_4:27318107-27318126 | Msa1321490:intron | 25.0% |
| ! | ATTTACAATGTATCCCAATT+GGG | - | chr8_4:27318174-27318193 | None:intergenic | 25.0% |
| ! | TATTTACAATGTATCCCAAT+TGG | - | chr8_4:27318175-27318194 | None:intergenic | 25.0% |
| ! | CTTTAAATACCATGATGAAT+AGG | - | chr8_4:27318209-27318228 | None:intergenic | 25.0% |
| !!! | GAAGGATTATATCTTGTTTT+CGG | + | chr8_4:27318366-27318385 | Msa1321490:three_prime_UTR | 25.0% |
| !!! | AAGGATTATATCTTGTTTTC+GGG | + | chr8_4:27318367-27318386 | Msa1321490:three_prime_UTR | 25.0% |
| GACAAAAGAGAAGTCTTAAT+GGG | - | chr8_4:27312931-27312950 | None:intergenic | 30.0% | |
| AGACAAAAGAGAAGTCTTAA+TGG | - | chr8_4:27312932-27312951 | None:intergenic | 30.0% | |
| AAATGGATGAAATTACGGTA+AGG | - | chr8_4:27313036-27313055 | None:intergenic | 30.0% | |
| TTAAACCTGTTATTGCATCT+TGG | + | chr8_4:27313466-27313485 | Msa1321490:intron | 30.0% | |
| !!! | TTTTTGGCTGATTAATAGTC+TGG | + | chr8_4:27313518-27313537 | Msa1321490:intron | 30.0% |
| CGCAATTCTTCAAAATATGA+AGG | - | chr8_4:27313594-27313613 | None:intergenic | 30.0% | |
| TATAAGAGAAACTATCAGGA+AGG | + | chr8_4:27313738-27313757 | Msa1321490:intron | 30.0% | |
| TTGATATCTTTCTGTCTGAT+AGG | + | chr8_4:27314135-27314154 | Msa1321490:five_prime_UTR | 30.0% | |
| ACCATTACTGATGATATGTT+TGG | + | chr8_4:27314178-27314197 | Msa1321490:CDS | 30.0% | |
| ACCAAACATATCATCAGTAA+TGG | - | chr8_4:27314182-27314201 | None:intergenic | 30.0% | |
| CACCAAATTATATGTAGCAA+AGG | - | chr8_4:27314216-27314235 | None:intergenic | 30.0% | |
| ATTACTGGTATAAGAAGCAA+AGG | + | chr8_4:27314417-27314436 | Msa1321490:CDS | 30.0% | |
| ! | GTTGTTATAATTGGTCTGTT+TGG | + | chr8_4:27314660-27314679 | Msa1321490:intron | 30.0% |
| GGTATTGCTGAAATAATTCA+AGG | + | chr8_4:27315046-27315065 | Msa1321490:intron | 30.0% | |
| ATGATATCAGATTGAGGAAA+GGG | + | chr8_4:27315070-27315089 | Msa1321490:intron | 30.0% | |
| ! | GTCGTGTGCTTAAATTTTAA+AGG | + | chr8_4:27315126-27315145 | Msa1321490:intron | 30.0% |
| TTCTATCTTCGACAAACAAA+AGG | - | chr8_4:27315183-27315202 | None:intergenic | 30.0% | |
| TTTAGGAAGTTACTGTGATA+AGG | + | chr8_4:27315303-27315322 | Msa1321490:intron | 30.0% | |
| TTATCCGGAAAATCTATTGT+AGG | + | chr8_4:27315347-27315366 | Msa1321490:intron | 30.0% | |
| ! | GTTTCCTACAATAGATTTTC+CGG | - | chr8_4:27315354-27315373 | None:intergenic | 30.0% |
| ATCGGATCAATATTTGTAAC+CGG | - | chr8_4:27315800-27315819 | None:intergenic | 30.0% | |
| GTTACAAATATTGATCCGAT+TGG | + | chr8_4:27315800-27315819 | Msa1321490:CDS | 30.0% | |
| TTCTCCTGTAATTATCAGAA+AGG | + | chr8_4:27315826-27315845 | Msa1321490:CDS | 30.0% | |
| TCTACCTTTCTGATAATTAC+AGG | - | chr8_4:27315833-27315852 | None:intergenic | 30.0% | |
| TTTATTCAACCATGAAGAAC+AGG | - | chr8_4:27315897-27315916 | None:intergenic | 30.0% | |
| ! | CTTGAATCTTTTGAATATGC+TGG | + | chr8_4:27316233-27316252 | Msa1321490:intron | 30.0% |
| AAAGAATCTGCAACATATGT+CGG | - | chr8_4:27316447-27316466 | None:intergenic | 30.0% | |
| !!! | TGTTATGTATTTTGGAACCA+AGG | + | chr8_4:27316507-27316526 | Msa1321490:intron | 30.0% |
| ! | GACCATAATTTTTCCATTCA+AGG | - | chr8_4:27316822-27316841 | None:intergenic | 30.0% |
| ! | TTGATTTTGTTACTATGCCA+TGG | + | chr8_4:27316896-27316915 | Msa1321490:intron | 30.0% |
| ! | GAATTGACTTACGGTAAAAT+TGG | + | chr8_4:27317037-27317056 | Msa1321490:CDS | 30.0% |
| !!! | GTTTTTTTCATTCCCTTACA+TGG | + | chr8_4:27317266-27317285 | Msa1321490:intron | 30.0% |
| ACATTTATCAAGCACATACA+TGG | - | chr8_4:27317411-27317430 | None:intergenic | 30.0% | |
| AGAAATATTCTTGTGCATCA+TGG | + | chr8_4:27317662-27317681 | Msa1321490:intron | 30.0% | |
| TTCAACAAGATGAACTAGAA+AGG | - | chr8_4:27317892-27317911 | None:intergenic | 30.0% | |
| TTTACAATGTATCCCAATTG+GGG | - | chr8_4:27318173-27318192 | None:intergenic | 30.0% | |
| ! | TTTTTCCTTCCTATTCATCA+TGG | + | chr8_4:27318197-27318216 | Msa1321490:three_prime_UTR | 30.0% |
| AAATACCATGATGAATAGGA+AGG | - | chr8_4:27318205-27318224 | None:intergenic | 30.0% | |
| ! | GTATTAAAAGGTGTATAGTG+AGG | - | chr8_4:27318334-27318353 | None:intergenic | 30.0% |
| !!! | AGGATTATATCTTGTTTTCG+GGG | + | chr8_4:27318368-27318387 | Msa1321490:three_prime_UTR | 30.0% |
| GAGAAGTCTTAATGGGAATA+AGG | - | chr8_4:27312924-27312943 | None:intergenic | 35.0% | |
| AGAGTGTATTGTGAAAACGA+AGG | - | chr8_4:27312958-27312977 | None:intergenic | 35.0% | |
| GAAAATGGGTGAATGGAAAA+TGG | - | chr8_4:27313007-27313026 | None:intergenic | 35.0% | |
| GAAGAATGAAAATGGGTGAA+TGG | - | chr8_4:27313014-27313033 | None:intergenic | 35.0% | |
| CGGTAAGGAAGAATGAAAAT+GGG | - | chr8_4:27313021-27313040 | None:intergenic | 35.0% | |
| ACGGTAAGGAAGAATGAAAA+TGG | - | chr8_4:27313022-27313041 | None:intergenic | 35.0% | |
| TAATGCCAAGATGCAATAAC+AGG | - | chr8_4:27313474-27313493 | None:intergenic | 35.0% | |
| ! | GGACAGTTATTTAAAACCCA+GGG | - | chr8_4:27313544-27313563 | None:intergenic | 35.0% |
| ! | AGGACAGTTATTTAAAACCC+AGG | - | chr8_4:27313545-27313564 | None:intergenic | 35.0% |
| !!! | TGGGTTTTAAATAACTGTCC+TGG | + | chr8_4:27313544-27313563 | Msa1321490:intron | 35.0% |
| GAAACTATCAAGTAGACTAG+TGG | + | chr8_4:27313660-27313679 | Msa1321490:intron | 35.0% | |
| !! | ACTAGTGGATTCTAGTAAGA+AGG | + | chr8_4:27313675-27313694 | Msa1321490:intron | 35.0% |
| !! | CTAGTGGATTCTAGTAAGAA+GGG | + | chr8_4:27313676-27313695 | Msa1321490:intron | 35.0% |
| AGTTAGATCACTAGAAGTAG+AGG | + | chr8_4:27313700-27313719 | Msa1321490:intron | 35.0% | |
| ACTAGAAGTAGAGGAAAACT+TGG | + | chr8_4:27313709-27313728 | Msa1321490:intron | 35.0% | |
| !! | AATAGCCTTATCTCACTAAG+TGG | - | chr8_4:27313841-27313860 | None:intergenic | 35.0% |
| GCTTGTTCTATCAAGAATTG+AGG | + | chr8_4:27314091-27314110 | Msa1321490:five_prime_UTR | 35.0% | |
| GTTCTATCAAGAATTGAGGA+AGG | + | chr8_4:27314095-27314114 | Msa1321490:five_prime_UTR | 35.0% | |
| !! | CTGATGATATGTTTGGTTCT+TGG | + | chr8_4:27314185-27314204 | Msa1321490:CDS | 35.0% |
| GTGACAATGATAATCCACTA+TGG | + | chr8_4:27314233-27314252 | Msa1321490:CDS | 35.0% | |
| GATAATCCACTATGGATCAT+CGG | + | chr8_4:27314241-27314260 | Msa1321490:CDS | 35.0% | |
| AAAAAACAATCCACCATCCT+CGG | - | chr8_4:27314279-27314298 | None:intergenic | 35.0% | |
| TTTGTGTTCTTCACATGTTC+AGG | - | chr8_4:27314320-27314339 | None:intergenic | 35.0% | |
| AATGCCGTATCATGTATTAC+TGG | + | chr8_4:27314402-27314421 | Msa1321490:CDS | 35.0% | |
| TAACTGAAAGTCATGGTAAG+CGG | - | chr8_4:27314569-27314588 | None:intergenic | 35.0% | |
| ! | TATAATTGGTCTGTTTGGGT+TGG | + | chr8_4:27314665-27314684 | Msa1321490:intron | 35.0% |
| ! | AAAATGGACTTTAACTGGCA+TGG | - | chr8_4:27314949-27314968 | None:intergenic | 35.0% |
| ! | GGATTTTACTTCTTTCACCA+AGG | - | chr8_4:27315013-27315032 | None:intergenic | 35.0% |
| GATGATATCAGATTGAGGAA+AGG | + | chr8_4:27315069-27315088 | Msa1321490:intron | 35.0% | |
| AGTTTAGTGTTAAGGTTTGC+AGG | + | chr8_4:27315226-27315245 | Msa1321490:intron | 35.0% | |
| ACACATTGCTTAATCTTTGC+AGG | + | chr8_4:27315476-27315495 | Msa1321490:intron | 35.0% | |
| CACATTGCTTAATCTTTGCA+GGG | + | chr8_4:27315477-27315496 | Msa1321490:intron | 35.0% | |
| ! | TTTTCTCCAAATGCCAGATT+GGG | - | chr8_4:27315695-27315714 | None:intergenic | 35.0% |
| ! | ATTTTCTCCAAATGCCAGAT+TGG | - | chr8_4:27315696-27315715 | None:intergenic | 35.0% |
| TAGAAAAATGGAAAAGCAGC+TGG | - | chr8_4:27315719-27315738 | None:intergenic | 35.0% | |
| !! | TGTAAGGAAGTATTATCCTG+AGG | + | chr8_4:27315766-27315785 | Msa1321490:CDS | 35.0% |
| AAGTATTATCCTGAGGAGAA+TGG | + | chr8_4:27315773-27315792 | Msa1321490:CDS | 35.0% | |
| ATTACAGGAGAATTGCCAAT+CGG | - | chr8_4:27315818-27315837 | None:intergenic | 35.0% | |
| GGATTAATACCTGTTCTTCA+TGG | + | chr8_4:27315885-27315904 | Msa1321490:intron | 35.0% | |
| GGTAAACCAGAACAATGTTA+AGG | - | chr8_4:27315930-27315949 | None:intergenic | 35.0% | |
| GTTGTGTTGAAAGATCTCAA+TGG | + | chr8_4:27316174-27316193 | Msa1321490:intron | 35.0% | |
| !!! | GTGAATACTTTTAGCTCACA+CGG | + | chr8_4:27316274-27316293 | Msa1321490:intron | 35.0% |
| !!! | TGTATTTTGGAACCAAGGTA+TGG | + | chr8_4:27316512-27316531 | Msa1321490:intron | 35.0% |
| AGTTGGGTATGCATAATAGT+TGG | - | chr8_4:27316675-27316694 | None:intergenic | 35.0% | |
| TATTTCTCCCAATCCTTGAA+TGG | + | chr8_4:27316806-27316825 | Msa1321490:intron | 35.0% | |
| !! | AGAAGCTTTAAGAAGGGAAA+AGG | - | chr8_4:27316877-27316896 | None:intergenic | 35.0% |
| AAATTAAGCTGTGTGTCTCA+TGG | - | chr8_4:27317222-27317241 | None:intergenic | 35.0% | |
| ! | TTTTCATTCCCTTACATGGT+AGG | + | chr8_4:27317270-27317289 | Msa1321490:intron | 35.0% |
| ! | GCTTTTATCCTCATCTATTC+TGG | + | chr8_4:27317488-27317507 | Msa1321490:intron | 35.0% |
| TTTATCCTCATCTATTCTGG+TGG | + | chr8_4:27317491-27317510 | Msa1321490:intron | 35.0% | |
| GAAACAACCTACAACATCTA+GGG | - | chr8_4:27317700-27317719 | None:intergenic | 35.0% | |
| AGTCTGACAGTAGCTATATT+AGG | - | chr8_4:27317722-27317741 | None:intergenic | 35.0% | |
| AGCAAATGATACCTCTCTTA+TGG | + | chr8_4:27317779-27317798 | Msa1321490:intron | 35.0% | |
| TCTTATGGAGAGGAATTCTT+TGG | + | chr8_4:27317794-27317813 | Msa1321490:intron | 35.0% | |
| TCTTGTAAAGATGGTGAATG+AGG | + | chr8_4:27318134-27318153 | Msa1321490:CDS | 35.0% | |
| !!! | GTCAACACTTTTTCTGTAAC+TGG | - | chr8_4:27318243-27318262 | None:intergenic | 35.0% |
| ! | AAGGTGTATAGTGAGGTATT+TGG | - | chr8_4:27318327-27318346 | None:intergenic | 35.0% |
| !!! | TATTTTGGCTCGTAACACAA+TGG | + | chr8_4:27318407-27318426 | Msa1321490:three_prime_UTR | 35.0% |
| CTCTCTGTCTGTTGAAACAA+AGG | + | chr8_4:27312853-27312872 | Msa1321490:five_prime_UTR | 40.0% | |
| ATGGGTGAATGGAAAATGGA+AGG | - | chr8_4:27313003-27313022 | None:intergenic | 40.0% | |
| TGAAGAATTGCGGTCAAATG+CGG | + | chr8_4:27313602-27313621 | Msa1321490:intron | 40.0% | |
| AGAAACTATCAGGAAGGATC+TGG | + | chr8_4:27313744-27313763 | Msa1321490:intron | 40.0% | |
| CGTATCCACTTAGTGAGATA+AGG | + | chr8_4:27313833-27313852 | Msa1321490:intron | 40.0% | |
| AAAGTCCGCATTTGCAATCT+GGG | - | chr8_4:27313916-27313935 | None:intergenic | 40.0% | |
| AAAAGTCCGCATTTGCAATC+TGG | - | chr8_4:27313917-27313936 | None:intergenic | 40.0% | |
| AACTATCCGATGATCCATAG+TGG | - | chr8_4:27314250-27314269 | None:intergenic | 40.0% | |
| GTTCAGGCATCTCAACAATA+GGG | - | chr8_4:27314304-27314323 | None:intergenic | 40.0% | |
| TGTTCAGGCATCTCAACAAT+AGG | - | chr8_4:27314305-27314324 | None:intergenic | 40.0% | |
| CTGATGCCATCTACAACAAA+TGG | + | chr8_4:27314378-27314397 | Msa1321490:CDS | 40.0% | |
| !! | GCATTGCCATTTGTTGTAGA+TGG | - | chr8_4:27314387-27314406 | None:intergenic | 40.0% |
| ACTTAGCTGTTTGTCCAAAC+AGG | + | chr8_4:27314904-27314923 | Msa1321490:intron | 40.0% | |
| CTTAGCTGTTTGTCCAAACA+GGG | + | chr8_4:27314905-27314924 | Msa1321490:intron | 40.0% | |
| !! | GCATGGAAGTATTCTAGACT+AGG | - | chr8_4:27314932-27314951 | None:intergenic | 40.0% |
| CAAGGGATGATATCAGATTG+AGG | + | chr8_4:27315064-27315083 | Msa1321490:intron | 40.0% | |
| GTCCACAAAGACACATTATC+CGG | + | chr8_4:27315332-27315351 | Msa1321490:intron | 40.0% | |
| TTCCGGATAATGTGTCTTTG+TGG | - | chr8_4:27315337-27315356 | None:intergenic | 40.0% | |
| CAGAACAATGTTAAGGACAG+GGG | - | chr8_4:27315923-27315942 | None:intergenic | 40.0% | |
| CCAGAACAATGTTAAGGACA+GGG | - | chr8_4:27315924-27315943 | None:intergenic | 40.0% | |
| ACCAGAACAATGTTAAGGAC+AGG | - | chr8_4:27315925-27315944 | None:intergenic | 40.0% | |
| GCATCGTCACTTCAGATTAA+AGG | + | chr8_4:27315987-27316006 | Msa1321490:intron | 40.0% | |
| CACAAGTTTCAGTGTCATGT+CGG | - | chr8_4:27316039-27316058 | None:intergenic | 40.0% | |
| ATCTGTGTATGTGTCATGTC+CGG | + | chr8_4:27316132-27316151 | Msa1321490:intron | 40.0% | |
| !! | GCTAAAAGTATTCACTTCCC+TGG | - | chr8_4:27316269-27316288 | None:intergenic | 40.0% |
| TTGCCAAAATTGCTCCTACA+TGG | + | chr8_4:27316335-27316354 | Msa1321490:CDS | 40.0% | |
| ! | CATCCATGTAGGAGCAATTT+TGG | - | chr8_4:27316341-27316360 | None:intergenic | 40.0% |
| TATGAAGATGAAAGAGGACC+CGG | + | chr8_4:27316369-27316388 | Msa1321490:CDS | 40.0% | |
| TGAAAGTTTCGGTATCCCAT+GGG | - | chr8_4:27316733-27316752 | None:intergenic | 40.0% | |
| TTGAAAGTTTCGGTATCCCA+TGG | - | chr8_4:27316734-27316753 | None:intergenic | 40.0% | |
| CCAGCTAAATCAAAGTTCCA+TGG | - | chr8_4:27316916-27316935 | None:intergenic | 40.0% | |
| ! | CCATGGAACTTTGATTTAGC+TGG | + | chr8_4:27316913-27316932 | Msa1321490:intron | 40.0% |
| ATGACATGACAAGTAGCTAG+TGG | - | chr8_4:27316961-27316980 | None:intergenic | 40.0% | |
| ! | ACTCAGGGTGAATTGACTTA+CGG | + | chr8_4:27317028-27317047 | Msa1321490:intron | 40.0% |
| CTTACGGTAAAATTGGTGAG+TGG | + | chr8_4:27317044-27317063 | Msa1321490:CDS | 40.0% | |
| TGTAGACATACCACACTTTC+AGG | - | chr8_4:27317139-27317158 | None:intergenic | 40.0% | |
| TCTTCTCACCTACCATGTAA+GGG | - | chr8_4:27317281-27317300 | None:intergenic | 40.0% | |
| TTCTTCTCACCTACCATGTA+AGG | - | chr8_4:27317282-27317301 | None:intergenic | 40.0% | |
| AAGCGAATCAAAGGACTGTT+TGG | - | chr8_4:27317436-27317455 | None:intergenic | 40.0% | |
| TCTGGCTATAAGCGAATCAA+AGG | - | chr8_4:27317445-27317464 | None:intergenic | 40.0% | |
| CTTACTTCCCTAGATGTTGT+AGG | + | chr8_4:27317690-27317709 | Msa1321490:intron | 40.0% | |
| GGAAACAACCTACAACATCT+AGG | - | chr8_4:27317701-27317720 | None:intergenic | 40.0% | |
| ATGATACCTCTCTTATGGAG+AGG | + | chr8_4:27317784-27317803 | Msa1321490:intron | 40.0% | |
| AGAATTCCTCTCCATAAGAG+AGG | - | chr8_4:27317793-27317812 | None:intergenic | 40.0% | |
| GACAATGGTCACTAACATCT+AGG | - | chr8_4:27317827-27317846 | None:intergenic | 40.0% | |
| ATGAACTAGACAGCAACTGT+CGG | - | chr8_4:27318013-27318032 | None:intergenic | 40.0% | |
| ! | TAATGCAATGCTTTTGCTGC+TGG | - | chr8_4:27318074-27318093 | None:intergenic | 40.0% |
| TCAGGTGACTCTTGTAAAGA+TGG | + | chr8_4:27318125-27318144 | Msa1321490:intron | 40.0% | |
| TTCTGCTAACATCCCCAATT+GGG | + | chr8_4:27318158-27318177 | Msa1321490:CDS | 40.0% | |
| !! | CAGAAAAAGTGTTGACATCG+AGG | + | chr8_4:27318247-27318266 | Msa1321490:three_prime_UTR | 40.0% |
| AGAGAGAGAGATTCTCCGAT+GGG | - | chr8_4:27312837-27312856 | None:intergenic | 45.0% | |
| GGAACGTGAGAAGCAGTAAT+GGG | - | chr8_4:27312982-27313001 | None:intergenic | 45.0% | |
| AGGAACGTGAGAAGCAGTAA+TGG | - | chr8_4:27312983-27313002 | None:intergenic | 45.0% | |
| CTGATTAATAGTCTGGCCCT+GGG | + | chr8_4:27313525-27313544 | Msa1321490:intron | 45.0% | |
| GCTTAATTGCGGTCACATTG+CGG | + | chr8_4:27313633-27313652 | Msa1321490:intron | 45.0% | |
| GGATCTGGAGATTAACGAGT+TGG | + | chr8_4:27313759-27313778 | Msa1321490:intron | 45.0% | |
| TTGATTCTAGCAGTGCACTC+TGG | + | chr8_4:27313967-27313986 | Msa1321490:intron | 45.0% | |
| TCTGTCTGATAGGAAGACCA+TGG | + | chr8_4:27314145-27314164 | Msa1321490:exon | 45.0% | |
| ATCGGATAGTTTAGCTACCG+AGG | + | chr8_4:27314259-27314278 | Msa1321490:CDS | 45.0% | |
| GATAGTTTAGCTACCGAGGA+TGG | + | chr8_4:27314263-27314282 | Msa1321490:CDS | 45.0% | |
| GCGGTCAACGCAATATGAAA+CGG | - | chr8_4:27314356-27314375 | None:intergenic | 45.0% | |
| GTTGTAGATGGCATCAGTTG+CGG | - | chr8_4:27314375-27314394 | None:intergenic | 45.0% | |
| AAGAAGCAAAGGAGTCTACC+TGG | + | chr8_4:27314428-27314447 | Msa1321490:CDS | 45.0% | |
| AGTCTACCTGGATCAGAGAT+GGG | + | chr8_4:27314440-27314459 | Msa1321490:CDS | 45.0% | |
| TGGAAAGGCTGACAACTTGA+TGG | + | chr8_4:27314487-27314506 | Msa1321490:CDS | 45.0% | |
| TTCTAGACTAGGACCCTGTT+TGG | - | chr8_4:27314921-27314940 | None:intergenic | 45.0% | |
| ! | GGTTTTCGACTAGCATACCT+TGG | + | chr8_4:27314993-27315012 | Msa1321490:intron | 45.0% |
| ! | ACGTCGTTCTGAATAGACCA+TGG | + | chr8_4:27315502-27315521 | Msa1321490:CDS | 45.0% |
| ! | CGTCGTTCTGAATAGACCAT+GGG | + | chr8_4:27315503-27315522 | Msa1321490:CDS | 45.0% |
| ! | CTTTTCCAGCCACTGAACAA+AGG | - | chr8_4:27315529-27315548 | None:intergenic | 45.0% |
| CTTTGTTCAGTGGCTGGAAA+AGG | + | chr8_4:27315527-27315546 | Msa1321490:CDS | 45.0% | |
| CAAATGCCAGATTGGGAAGA+GGG | - | chr8_4:27315688-27315707 | None:intergenic | 45.0% | |
| TTATCCTGAGGAGAATGGAC+CGG | + | chr8_4:27315778-27315797 | Msa1321490:CDS | 45.0% | |
| CCCTGTCCTTAACATTGTTC+TGG | + | chr8_4:27315921-27315940 | Msa1321490:intron | 45.0% | |
| TTGAGTGTCTGTGTCGTGTA+CGG | + | chr8_4:27316101-27316120 | Msa1321490:intron | 45.0% | |
| GAACTATGAACCACAGACAC+CGG | - | chr8_4:27316154-27316173 | None:intergenic | 45.0% | |
| !! | TATGCTGGTTCGATAAGACC+AGG | + | chr8_4:27316248-27316267 | Msa1321490:intron | 45.0% |
| !! | ATGCTGGTTCGATAAGACCA+GGG | + | chr8_4:27316249-27316268 | Msa1321490:intron | 45.0% |
| !!! | TACTTTTAGCTCACACGGTG+AGG | + | chr8_4:27316279-27316298 | Msa1321490:intron | 45.0% |
| !!! | ACTTTTAGCTCACACGGTGA+GGG | + | chr8_4:27316280-27316299 | Msa1321490:intron | 45.0% |
| ! | AGACCGACAAAGCTTTTGGA+TGG | + | chr8_4:27316392-27316411 | Msa1321490:CDS | 45.0% |
| ! | GACCGACAAAGCTTTTGGAT+GGG | + | chr8_4:27316393-27316412 | Msa1321490:CDS | 45.0% |
| ! | CACCCATCCAAAAGCTTTGT+CGG | - | chr8_4:27316398-27316417 | None:intergenic | 45.0% |
| GCAACAGCATAACCATACCT+TGG | - | chr8_4:27316527-27316546 | None:intergenic | 45.0% | |
| AATATGTCTCACGCCATGCA+GGG | - | chr8_4:27316555-27316574 | None:intergenic | 45.0% | |
| GCGAAAAGACTTCATGCTAC+AGG | + | chr8_4:27316577-27316596 | Msa1321490:CDS | 45.0% | |
| AAAGTTTCGGTATCCCATGG+GGG | - | chr8_4:27316731-27316750 | None:intergenic | 45.0% | |
| GAAAGTTTCGGTATCCCATG+GGG | - | chr8_4:27316732-27316751 | None:intergenic | 45.0% | |
| CGGGTGTGACTACAATATGA+AGG | + | chr8_4:27316778-27316797 | Msa1321490:CDS | 45.0% | |
| GACAAAAGATCACATCTGCG+AGG | + | chr8_4:27317073-27317092 | Msa1321490:CDS | 45.0% | |
| AATGGCAAGTTTCTTGGTGG+TGG | - | chr8_4:27317100-27317119 | None:intergenic | 45.0% | |
| ! | GGTAATGGCAAGTTTCTTGG+TGG | - | chr8_4:27317103-27317122 | None:intergenic | 45.0% |
| ! | GGAGGTAATGGCAAGTTTCT+TGG | - | chr8_4:27317106-27317125 | None:intergenic | 45.0% |
| TATGGGCATCTGAGAAGTTC+TGG | - | chr8_4:27317463-27317482 | None:intergenic | 45.0% | |
| TACAGCCACCAGAATAGATG+AGG | - | chr8_4:27317499-27317518 | None:intergenic | 45.0% | |
| CTATTCTGGTGGCTGTAGAA+CGG | + | chr8_4:27317502-27317521 | Msa1321490:intron | 45.0% | |
| GTAGAACAATTGTCGAAGCC+CGG | - | chr8_4:27317604-27317623 | None:intergenic | 45.0% | |
| CTTCTGCTAACATCCCCAAT+TGG | + | chr8_4:27318157-27318176 | Msa1321490:CDS | 45.0% | |
| !!! | TTTAATTTGTAAAATAAAAA+GGG | - | chr8_4:27313334-27313353 | None:intergenic | 5.0% |
| !!! | TTTTAATTTGTAAAATAAAA+AGG | - | chr8_4:27313335-27313354 | None:intergenic | 5.0% |
| GAGAGAGAGATTCTCCGATG+GGG | - | chr8_4:27312836-27312855 | None:intergenic | 50.0% | |
| GAGAGAGAGAGATTCTCCGA+TGG | - | chr8_4:27312838-27312857 | None:intergenic | 50.0% | |
| GCTGATTAATAGTCTGGCCC+TGG | + | chr8_4:27313524-27313543 | Msa1321490:intron | 50.0% | |
| CGGCTGATGTGGCTTAATTG+CGG | + | chr8_4:27313622-27313641 | Msa1321490:intron | 50.0% | |
| TAATGGTGAAGCTCGTGCCA+TGG | - | chr8_4:27314165-27314184 | None:intergenic | 50.0% | |
| AGTTTAGCTACCGAGGATGG+TGG | + | chr8_4:27314266-27314285 | Msa1321490:CDS | 50.0% | |
| GAGTCTACCTGGATCAGAGA+TGG | + | chr8_4:27314439-27314458 | Msa1321490:CDS | 50.0% | |
| AATCCTCCCATCTCTGATCC+AGG | - | chr8_4:27314449-27314468 | None:intergenic | 50.0% | |
| AGAGGATCAACGACGACAGT+AGG | - | chr8_4:27314521-27314540 | None:intergenic | 50.0% | |
| TGTCGTCGTTGATCCTCTTC+CGG | + | chr8_4:27314523-27314542 | Msa1321490:CDS | 50.0% | |
| TCTTCCGGAAGGTCTAGACA+GGG | + | chr8_4:27314538-27314557 | Msa1321490:CDS | 50.0% | |
| GGGCGTACAAATACGTGATC+AGG | - | chr8_4:27315668-27315687 | None:intergenic | 50.0% | |
| CCAAATGCCAGATTGGGAAG+AGG | - | chr8_4:27315689-27315708 | None:intergenic | 50.0% | |
| CCTCTTCCCAATCTGGCATT+TGG | + | chr8_4:27315686-27315705 | Msa1321490:CDS | 50.0% | |
| !!! | CTTTTAGCTCACACGGTGAG+GGG | + | chr8_4:27316281-27316300 | Msa1321490:intron | 50.0% |
| ! | CAAAAGCTTTGTCGGTCTCC+GGG | - | chr8_4:27316390-27316409 | None:intergenic | 50.0% |
| ! | CCAAAAGCTTTGTCGGTCTC+CGG | - | chr8_4:27316391-27316410 | None:intergenic | 50.0% |
| ! | CAAAGCTTTTGGATGGGTGC+TGG | + | chr8_4:27316399-27316418 | Msa1321490:CDS | 50.0% |
| GAATATGTCTCACGCCATGC+AGG | - | chr8_4:27316556-27316575 | None:intergenic | 50.0% | |
| ! | ATGTGACTTTTCAGCCCCCA+TGG | + | chr8_4:27316714-27316733 | Msa1321490:intron | 50.0% |
| ! | TGTGACTTTTCAGCCCCCAT+GGG | + | chr8_4:27316715-27316734 | Msa1321490:intron | 50.0% |
| AACTTGCCATTACCTCCTCC+AGG | + | chr8_4:27317109-27317128 | Msa1321490:CDS | 50.0% | |
| ACACTTTCAGGAACACCTGG+AGG | - | chr8_4:27317127-27317146 | None:intergenic | 50.0% | |
| TCCAGGTGTTCCTGAAAGTG+TGG | + | chr8_4:27317126-27317145 | Msa1321490:CDS | 50.0% | |
| ACCACACTTTCAGGAACACC+TGG | - | chr8_4:27317130-27317149 | None:intergenic | 50.0% | |
| CTAATGTCAGGCAGCACTAG+AGG | - | chr8_4:27317359-27317378 | None:intergenic | 50.0% | |
| CTCTAGTGCTGCCTGACATT+AGG | + | chr8_4:27317357-27317376 | Msa1321490:intron | 50.0% | |
| TATAGGTGGTAGGGTAGGGT+GGG | + | chr8_4:27317534-27317553 | Msa1321490:intron | 50.0% | |
| ! | AAGATTGGCCGCAATCTGAG+CGG | - | chr8_4:27317565-27317584 | None:intergenic | 50.0% |
| ! | AACTGTCGGTTAAGCAGTGG+GGG | - | chr8_4:27317999-27318018 | None:intergenic | 50.0% |
| ! | CAACTGTCGGTTAAGCAGTG+GGG | - | chr8_4:27318000-27318019 | None:intergenic | 50.0% |
| ! | GCAACTGTCGGTTAAGCAGT+GGG | - | chr8_4:27318001-27318020 | None:intergenic | 50.0% |
| ! | AGCAACTGTCGGTTAAGCAG+TGG | - | chr8_4:27318002-27318021 | None:intergenic | 50.0% |
| AGATTCTCCGATGGGGACGA+CGG | - | chr8_4:27312829-27312848 | None:intergenic | 55.0% | |
| ACGCGACTGCGACTATTACC+AGG | - | chr8_4:27313565-27313584 | None:intergenic | 55.0% | |
| TGCGGCCCAGATTGCAAATG+CGG | + | chr8_4:27313908-27313927 | Msa1321490:intron | 55.0% | |
| CTACCTGGATCAGAGATGGG+AGG | + | chr8_4:27314443-27314462 | Msa1321490:CDS | 55.0% | |
| GTCGTTGATCCTCTTCCGGA+AGG | + | chr8_4:27314527-27314546 | Msa1321490:CDS | 55.0% | |
| CTGTCTAGACCTTCCGGAAG+AGG | - | chr8_4:27314539-27314558 | None:intergenic | 55.0% | |
| CTCTTCCGGAAGGTCTAGAC+AGG | + | chr8_4:27314537-27314556 | Msa1321490:CDS | 55.0% | |
| CTCACCCTGTCTAGACCTTC+CGG | - | chr8_4:27314545-27314564 | None:intergenic | 55.0% | |
| GACCATGGGCCTTTGTTCAG+TGG | + | chr8_4:27315517-27315536 | Msa1321490:CDS | 55.0% | |
| AGCCACTGAACAAAGGCCCA+TGG | - | chr8_4:27315522-27315541 | None:intergenic | 55.0% | |
| ATGGGCCTTTGTTCAGTGGC+TGG | + | chr8_4:27315521-27315540 | Msa1321490:CDS | 55.0% | |
| TGTACGCCCTCTTCCCAATC+TGG | + | chr8_4:27315679-27315698 | Msa1321490:CDS | 55.0% | |
| GTAACCGGTCCATTCTCCTC+AGG | - | chr8_4:27315785-27315804 | None:intergenic | 55.0% | |
| TCTGTGTCGTGTACGGTGTC+TGG | + | chr8_4:27316108-27316127 | Msa1321490:intron | 55.0% | |
| TGTGTCATGTCCGGTGTCTG+TGG | + | chr8_4:27316141-27316160 | Msa1321490:intron | 55.0% | |
| ! | CCGGAGACCGACAAAGCTTT+TGG | + | chr8_4:27316388-27316407 | Msa1321490:CDS | 55.0% |
| GGAACACCTGGAGGAGGTAA+TGG | - | chr8_4:27317118-27317137 | None:intergenic | 55.0% | |
| CTTTCAGGAACACCTGGAGG+AGG | - | chr8_4:27317124-27317143 | None:intergenic | 55.0% | |
| TCTGGTGGCTGTAGAACGGA+CGG | + | chr8_4:27317506-27317525 | Msa1321490:intron | 55.0% | |
| CCTACCCTACCACCTATAGG+CGG | - | chr8_4:27317532-27317551 | None:intergenic | 55.0% | |
| CGCCTATAGGTGGTAGGGTA+GGG | + | chr8_4:27317530-27317549 | Msa1321490:intron | 55.0% | |
| CACCCTACCCTACCACCTAT+AGG | - | chr8_4:27317535-27317554 | None:intergenic | 55.0% | |
| CTATAGGTGGTAGGGTAGGG+TGG | + | chr8_4:27317533-27317552 | Msa1321490:intron | 55.0% | |
| CTGCGCGCTGTTAGGAAGAT+TGG | - | chr8_4:27317580-27317599 | None:intergenic | 55.0% | |
| ! | ACTGTCGGTTAAGCAGTGGG+GGG | - | chr8_4:27317998-27318017 | None:intergenic | 55.0% |
| GCGGTCAAATGCGGCTGATG+TGG | + | chr8_4:27313611-27313630 | Msa1321490:intron | 60.0% | |
| CGGAAGGTCTAGACAGGGTG+AGG | + | chr8_4:27314543-27314562 | Msa1321490:intron | 60.0% | |
| GGACGACACGTGTCAGACTC+TGG | - | chr8_4:27316018-27316037 | None:intergenic | 60.0% | |
| GCTGTTGCATCTGCCCTGCA+TGG | + | chr8_4:27316539-27316558 | Msa1321490:CDS | 60.0% | |
| TAGAACGGACGGCCGCCTAT+AGG | + | chr8_4:27317517-27317536 | Msa1321490:intron | 60.0% | |
| ACGGCCGCCTATAGGTGGTA+GGG | + | chr8_4:27317525-27317544 | Msa1321490:intron | 60.0% | |
| CCGCCTATAGGTGGTAGGGT+AGG | + | chr8_4:27317529-27317548 | Msa1321490:intron | 60.0% | |
| GGGTGGTACCGCTCAGATTG+CGG | + | chr8_4:27317554-27317573 | Msa1321490:intron | 60.0% | |
| CTTCCTAACAGCGCGCAGAC+CGG | + | chr8_4:27317582-27317601 | Msa1321490:intron | 60.0% | |
| TTCCTAACAGCGCGCAGACC+GGG | + | chr8_4:27317583-27317602 | Msa1321490:intron | 60.0% | |
| TGGGGACGACGGAGGGAACA+CGG | - | chr8_4:27312818-27312837 | None:intergenic | 65.0% | |
| GTTCCCTCCGTCGTCCCCAT+CGG | + | chr8_4:27312819-27312838 | Msa1321490:five_prime_UTR | 65.0% | |
| TCTCCGATGGGGACGACGGA+GGG | - | chr8_4:27312825-27312844 | None:intergenic | 65.0% | |
| TTCTCCGATGGGGACGACGG+AGG | - | chr8_4:27312826-27312845 | None:intergenic | 65.0% | |
| AACGGACGGCCGCCTATAGG+TGG | + | chr8_4:27317520-27317539 | Msa1321490:intron | 65.0% | |
| GACGGCCGCCTATAGGTGGT+AGG | + | chr8_4:27317524-27317543 | Msa1321490:intron | 65.0% | |
| AGGTGGTAGGGTAGGGTGGG+TGG | + | chr8_4:27317537-27317556 | Msa1321490:intron | 65.0% | |
| GGACGACGGAGGGAACACGG+CGG | - | chr8_4:27312815-27312834 | None:intergenic | 70.0% | |
| AGCCCGGTCTGCGCGCTGTT+AGG | - | chr8_4:27317588-27317607 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 27312755 | 27318431 | 27312755 | ID=Msa1321490;Name=Msa1321490 |
| chr8_4 | mRNA | 27312755 | 27318431 | 27312755 | ID=Msa1321490-mRNA-1;Parent=Msa1321490;Name=Msa1321490-mRNA-1;_AED=0.09;_eAED=0.09;_QI=205|1|1|1|0.87|0.77|9|240|360 |
| chr8_4 | exon | 27312755 | 27312874 | 27312755 | ID=Msa1321490-mRNA-1:exon:9206;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27314079 | 27314559 | 27314079 | ID=Msa1321490-mRNA-1:exon:9207;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27315498 | 27315565 | 27315498 | ID=Msa1321490-mRNA-1:exon:9208;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27315646 | 27315847 | 27315646 | ID=Msa1321490-mRNA-1:exon:9209;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27316328 | 27316425 | 27316328 | ID=Msa1321490-mRNA-1:exon:9210;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27316529 | 27316598 | 27316529 | ID=Msa1321490-mRNA-1:exon:9211;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27316728 | 27316799 | 27316728 | ID=Msa1321490-mRNA-1:exon:9212;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27317034 | 27317147 | 27317034 | ID=Msa1321490-mRNA-1:exon:9213;Parent=Msa1321490-mRNA-1 |
| chr8_4 | exon | 27318129 | 27318431 | 27318129 | ID=Msa1321490-mRNA-1:exon:9214;Parent=Msa1321490-mRNA-1 |
| chr8_4 | five_prime_UTR | 27312755 | 27312874 | 27312755 | ID=Msa1321490-mRNA-1:five_prime_utr;Parent=Msa1321490-mRNA-1 |
| chr8_4 | five_prime_UTR | 27314079 | 27314163 | 27314079 | ID=Msa1321490-mRNA-1:five_prime_utr;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27314164 | 27314559 | 27314164 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27315498 | 27315565 | 27315498 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27315646 | 27315847 | 27315646 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27316328 | 27316425 | 27316328 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27316529 | 27316598 | 27316529 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27316728 | 27316799 | 27316728 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27317034 | 27317147 | 27317034 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | CDS | 27318129 | 27318191 | 27318129 | ID=Msa1321490-mRNA-1:cds;Parent=Msa1321490-mRNA-1 |
| chr8_4 | three_prime_UTR | 27318192 | 27318431 | 27318192 | ID=Msa1321490-mRNA-1:three_prime_utr;Parent=Msa1321490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
