Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450220 | XP_003601241.2 | 91.379 | 58 | 5 | 0 | 1 | 58 | 1 | 58 | 3.47e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450220 | G7J5D6 | 91.379 | 58 | 5 | 0 | 1 | 58 | 1 | 58 | 1.66e-26 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030400 | Msa0450220 | 0.807448 | 5.028976e-50 | -8.615850e-47 |
| Msa0046360 | Msa0450220 | 0.817941 | 2.539362e-52 | -8.615850e-47 |
| Msa0059590 | Msa0450220 | 0.800064 | 1.717124e-48 | -8.615850e-47 |
| Msa0062750 | Msa0450220 | 0.831345 | 1.759614e-55 | -8.615850e-47 |
| Msa0094700 | Msa0450220 | 0.824918 | 6.220029e-54 | -8.615850e-47 |
| Msa0121080 | Msa0450220 | 0.801573 | 8.448579e-49 | -8.615850e-47 |
| Msa0153640 | Msa0450220 | 0.818842 | 1.587102e-52 | -8.615850e-47 |
| Msa0173760 | Msa0450220 | 0.809611 | 1.737433e-50 | -8.615850e-47 |
| Msa0173850 | Msa0450220 | 0.813123 | 3.000969e-51 | -8.615850e-47 |
| Msa0185550 | Msa0450220 | 0.834902 | 2.291322e-56 | -8.615850e-47 |
| Msa0206970 | Msa0450220 | 0.808521 | 2.973600e-50 | -8.615850e-47 |
| Msa0380420 | Msa0450220 | 0.832056 | 1.174845e-55 | -8.615850e-47 |
| Msa0416000 | Msa0450220 | 0.814464 | 1.520487e-51 | -8.615850e-47 |
| Msa0421100 | Msa0450220 | 0.802180 | 6.338578e-49 | -8.615850e-47 |
| Msa0450220 | Msa0466100 | 0.806423 | 8.285310e-50 | -8.615850e-47 |
| Msa0450220 | Msa0470030 | 0.812543 | 4.021698e-51 | -8.615850e-47 |
| Msa0450220 | Msa0471890 | 0.808643 | 2.799708e-50 | -8.615850e-47 |
| Msa0450220 | Msa0476150 | 0.834950 | 2.227857e-56 | -8.615850e-47 |
| Msa0450220 | Msa0476180 | 0.826563 | 2.532288e-54 | -8.615850e-47 |
| Msa0450220 | Msa0528740 | 0.828589 | 8.263954e-55 | -8.615850e-47 |
| Msa0450220 | Msa0528870 | 0.803055 | 4.185045e-49 | -8.615850e-47 |
| Msa0450220 | Msa0558850 | 0.822343 | 2.492226e-53 | -8.615850e-47 |
| Msa0450220 | Msa0579610 | 0.801842 | 7.441638e-49 | -8.615850e-47 |
| Msa0450220 | Msa0607440 | 0.835501 | 1.617216e-56 | -8.615850e-47 |
| Msa0450220 | Msa0626890 | 0.800921 | 1.148450e-48 | -8.615850e-47 |
| Msa0450220 | Msa0645780 | 0.814850 | 1.248952e-51 | -8.615850e-47 |
| Msa0450220 | Msa0650360 | 0.826459 | 2.682097e-54 | -8.615850e-47 |
| Msa0450220 | Msa0657820 | 0.814841 | 1.254699e-51 | -8.615850e-47 |
| Msa0450220 | Msa0685880 | 0.823303 | 1.489289e-53 | -8.615850e-47 |
| Msa0450220 | Msa0714020 | 0.825503 | 4.524110e-54 | -8.615850e-47 |
| Msa0450220 | Msa0714160 | 0.811853 | 5.686848e-51 | -8.615850e-47 |
| Msa0450220 | Msa0785670 | 0.820088 | 8.249677e-53 | -8.615850e-47 |
| Msa0450220 | Msa0814760 | 0.803650 | 3.149977e-49 | -8.615850e-47 |
| Msa0450220 | Msa0931730 | 0.806613 | 7.554521e-50 | -8.615850e-47 |
| Msa0450220 | Msa1011210 | 0.802927 | 4.448070e-49 | -8.615850e-47 |
| Msa0450220 | Msa1011240 | 0.809200 | 2.128598e-50 | -8.615850e-47 |
| Msa0450220 | Msa1028460 | 0.805530 | 1.277058e-49 | -8.615850e-47 |
| Msa0450220 | Msa1058980 | 0.805162 | 1.525115e-49 | -8.615850e-47 |
| Msa0450220 | Msa1070930 | 0.810066 | 1.386279e-50 | -8.615850e-47 |
| Msa0450220 | Msa1081700 | 0.805950 | 1.042409e-49 | -8.615850e-47 |
| Msa0450220 | Msa1084490 | 0.814252 | 1.693962e-51 | -8.615850e-47 |
| Msa0450220 | Msa1145370 | 0.823081 | 1.678472e-53 | -8.615850e-47 |
| Msa0450220 | Msa1151120 | 0.817016 | 4.103355e-52 | -8.615850e-47 |
| Msa0450220 | Msa1161760 | 0.803154 | 3.991026e-49 | -8.615850e-47 |
| Msa0450220 | Msa1208980 | 0.808730 | 2.682444e-50 | -8.615850e-47 |
| Msa0450220 | Msa1224140 | 0.823845 | 1.112396e-53 | -8.615850e-47 |
| Msa0450220 | Msa1325980 | 0.801054 | 1.079112e-48 | -8.615850e-47 |
| Msa0450220 | Msa1326000 | 0.804455 | 2.142989e-49 | -8.615850e-47 |
| Msa0450220 | Msa1366620 | 0.807516 | 4.865333e-50 | -8.615850e-47 |
| Msa0450220 | Msa1375630 | 0.833856 | 4.193265e-56 | -8.615850e-47 |
| Msa0450220 | Msa1376530 | 0.822586 | 2.188432e-53 | -8.615850e-47 |
| Msa0450220 | Msa1388230 | 0.816334 | 5.833192e-52 | -8.615850e-47 |
| Msa0450220 | Msa1397110 | 0.813558 | 2.408830e-51 | -8.615850e-47 |
| Msa0450220 | Msa1403900 | 0.812131 | 4.946150e-51 | -8.615850e-47 |
| Msa0450220 | Msa1408190 | 0.800751 | 1.244144e-48 | -8.615850e-47 |
| Msa0450220 | Msa1448990 | 0.801394 | 9.193622e-49 | -8.615850e-47 |
| Msa0258380 | Msa0450220 | 0.807658 | 4.539746e-50 | -8.615850e-47 |
| Msa0266010 | Msa0450220 | 0.808235 | 3.421674e-50 | -8.615850e-47 |
| Msa0292150 | Msa0450220 | 0.800098 | 1.689988e-48 | -8.615850e-47 |
| Msa0296610 | Msa0450220 | 0.808054 | 3.739994e-50 | -8.615850e-47 |
| Msa0312780 | Msa0450220 | 0.803616 | 3.202003e-49 | -8.615850e-47 |
| Msa0350020 | Msa0450220 | 0.804982 | 1.663078e-49 | -8.615850e-47 |
| Msa0352200 | Msa0450220 | 0.812343 | 4.446752e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0450220 | MtrunA17_Chr3g0117381 | 91.379 | 58 | 5 | 0 | 1 | 58 | 1 | 58 | 3.19e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 14 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCAATATGCATGCAGATT+TGG | 0.351626 | 3_3:-35596414 | None:intergenic |
| TACATCTGAACTGCCACATT+TGG | 0.396813 | 3_3:-35594457 | None:intergenic |
| TTGCAGCTGCTGCTTGGAAA+AGG | 0.421472 | 3_3:-35596439 | None:intergenic |
| GTATGCTTGCAGCTGCTGCT+TGG | 0.434434 | 3_3:-35596445 | None:intergenic |
| GAAGAGTGTGCCTGAGGCAT+AGG | 0.506379 | 3_3:-35596494 | None:intergenic |
| TGCAGCTGCTGCTTGGAAAA+GGG | 0.521689 | 3_3:-35596438 | None:intergenic |
| CTTTGTTTCGTTACCAAATG+TGG | 0.526160 | 3_3:+35594444 | Msa0450220:CDS |
| GAGCACAACACCTATGCCTC+AGG | 0.539913 | 3_3:+35596484 | Msa0450220:CDS |
| GCATACTGCCATCTTCATCT+CGG | 0.604514 | 3_3:+35596462 | Msa0450220:CDS |
| GCTGCTGCTTGGAAAAGGGA+AGG | 0.617526 | 3_3:-35596434 | None:intergenic |
| TGTTGGAAGATAAATGACTC+TGG | 0.626740 | 3_3:+35594377 | None:intergenic |
| TTAAAGGAAGAGTGTGCCTG+AGG | 0.660302 | 3_3:-35596500 | None:intergenic |
| GTTGTGCTCCGAGATGAAGA+TGG | 0.662821 | 3_3:-35596470 | None:intergenic |
| TTCAAGTGAGAGAATGCATG+AGG | 0.732020 | 3_3:-35594501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACAACTTTTATTATTATT+TGG | - | chr3_3:35595948-35595967 | None:intergenic | 10.0% |
| !!! | TAACAACTTTTATTATTATT+TGG | - | chr3_3:35595948-35595967 | None:intergenic | 10.0% |
| !!! | TTGTAACAACTTTTATTATA+AGG | - | chr3_3:35595914-35595933 | None:intergenic | 15.0% |
| !!! | GTAACAACTTTTATTATTAT+AGG | - | chr3_3:35595949-35595968 | None:intergenic | 15.0% |
| !! | TAATAATAAAAGTTGTTACA+AGG | + | chr3_3:35595950-35595969 | Msa0450220:intron | 15.0% |
| !!! | TGAGATTTTAAATTAATCTA+AGG | + | chr3_3:35596040-35596059 | Msa0450220:intron | 15.0% |
| !!! | TTTAGTTCAATTTTTAGAAA+GGG | - | chr3_3:35596195-35596214 | None:intergenic | 15.0% |
| !! | TTTCTATAATATTATGAATC+TGG | - | chr3_3:35596381-35596400 | None:intergenic | 15.0% |
| !!! | TTGTAACAACTTTTATTATA+AGG | - | chr3_3:35595914-35595933 | None:intergenic | 15.0% |
| !!! | GTAACAACTTTTATTATTAT+AGG | - | chr3_3:35595949-35595968 | None:intergenic | 15.0% |
| !! | TAATAATAAAAGTTGTTACA+AGG | + | chr3_3:35595950-35595969 | Msa0450220:intron | 15.0% |
| !!! | TGAGATTTTAAATTAATCTA+AGG | + | chr3_3:35596040-35596059 | Msa0450220:intron | 15.0% |
| !!! | TTTAGTTCAATTTTTAGAAA+GGG | - | chr3_3:35596195-35596214 | None:intergenic | 15.0% |
| !! | TTTCTATAATATTATGAATC+TGG | - | chr3_3:35596381-35596400 | None:intergenic | 15.0% |
| !! | AAGTGATATAATTAACTCTA+AGG | - | chr3_3:35595252-35595271 | None:intergenic | 20.0% |
| !! | TAGAGTTAATTATATCACTT+TGG | + | chr3_3:35595252-35595271 | Msa0450220:intron | 20.0% |
| !! | AGTAAAAGTTGAGATAAATA+AGG | - | chr3_3:35595397-35595416 | None:intergenic | 20.0% |
| !!! | GTCAAAAAAAATTTGTTACA+AGG | + | chr3_3:35595974-35595993 | Msa0450220:intron | 20.0% |
| !! | TTATATGAAAAACTCCAATT+AGG | + | chr3_3:35596109-35596128 | Msa0450220:intron | 20.0% |
| !! | TATATGAAAAACTCCAATTA+GGG | + | chr3_3:35596110-35596129 | Msa0450220:intron | 20.0% |
| !!! | GTTTAGTTCAATTTTTAGAA+AGG | - | chr3_3:35596196-35596215 | None:intergenic | 20.0% |
| !! | AAGTGATATAATTAACTCTA+AGG | - | chr3_3:35595252-35595271 | None:intergenic | 20.0% |
| !! | TAGAGTTAATTATATCACTT+TGG | + | chr3_3:35595252-35595271 | Msa0450220:intron | 20.0% |
| !! | AGTAAAAGTTGAGATAAATA+AGG | - | chr3_3:35595397-35595416 | None:intergenic | 20.0% |
| !!! | GTCAAAAAAAATTTGTTACA+AGG | + | chr3_3:35595974-35595993 | Msa0450220:intron | 20.0% |
| !! | TTATATGAAAAACTCCAATT+AGG | + | chr3_3:35596109-35596128 | Msa0450220:intron | 20.0% |
| !! | TATATGAAAAACTCCAATTA+GGG | + | chr3_3:35596110-35596129 | Msa0450220:intron | 20.0% |
| !!! | GTTTAGTTCAATTTTTAGAA+AGG | - | chr3_3:35596196-35596215 | None:intergenic | 20.0% |
| ! | ATTCCTTGAAGATATTATGT+TGG | + | chr3_3:35594674-35594693 | Msa0450220:intron | 25.0% |
| ! | TTCCTTGAAGATATTATGTT+GGG | + | chr3_3:35594675-35594694 | Msa0450220:intron | 25.0% |
| ! | GATCCTAAAAATATCTAAGA+AGG | - | chr3_3:35594702-35594721 | None:intergenic | 25.0% |
| ! | CTATGAAAAACTAAGAGAAA+AGG | - | chr3_3:35594724-35594743 | None:intergenic | 25.0% |
| !! | TCTTTTGATCTTGCAATATA+TGG | + | chr3_3:35594953-35594972 | Msa0450220:intron | 25.0% |
| ! | AAGCATTTAACTCTTGATTA+TGG | - | chr3_3:35595136-35595155 | None:intergenic | 25.0% |
| ! | AATCAAGAGTTAAATGCTTT+CGG | + | chr3_3:35595137-35595156 | Msa0450220:intron | 25.0% |
| !! | AATAAGGATTGAAACTTGTT+AGG | - | chr3_3:35595381-35595400 | None:intergenic | 25.0% |
| ! | AAACAAGTACTCTTAATACT+TGG | + | chr3_3:35595456-35595475 | Msa0450220:intron | 25.0% |
| !! | TTTTGAATTAACAGTGATGT+GGG | - | chr3_3:35595807-35595826 | None:intergenic | 25.0% |
| !! | TTGGAGTTTTTCATATAAGA+GGG | - | chr3_3:35596107-35596126 | None:intergenic | 25.0% |
| !! | ATTGGAGTTTTTCATATAAG+AGG | - | chr3_3:35596108-35596127 | None:intergenic | 25.0% |
| ! | ATATGAAAAACTCCAATTAG+GGG | + | chr3_3:35596111-35596130 | Msa0450220:intron | 25.0% |
| !! | CACTTTTAAATTCCACTTAT+TGG | + | chr3_3:35596339-35596358 | Msa0450220:intron | 25.0% |
| ! | ATTCCTTGAAGATATTATGT+TGG | + | chr3_3:35594674-35594693 | Msa0450220:intron | 25.0% |
| ! | TTCCTTGAAGATATTATGTT+GGG | + | chr3_3:35594675-35594694 | Msa0450220:intron | 25.0% |
| ! | GATCCTAAAAATATCTAAGA+AGG | - | chr3_3:35594702-35594721 | None:intergenic | 25.0% |
| ! | CTATGAAAAACTAAGAGAAA+AGG | - | chr3_3:35594724-35594743 | None:intergenic | 25.0% |
| !! | TCTTTTGATCTTGCAATATA+TGG | + | chr3_3:35594953-35594972 | Msa0450220:intron | 25.0% |
| ! | AAGCATTTAACTCTTGATTA+TGG | - | chr3_3:35595136-35595155 | None:intergenic | 25.0% |
| ! | AATCAAGAGTTAAATGCTTT+CGG | + | chr3_3:35595137-35595156 | Msa0450220:intron | 25.0% |
| !! | AATAAGGATTGAAACTTGTT+AGG | - | chr3_3:35595381-35595400 | None:intergenic | 25.0% |
| ! | AAACAAGTACTCTTAATACT+TGG | + | chr3_3:35595456-35595475 | Msa0450220:intron | 25.0% |
| !! | TTTTGAATTAACAGTGATGT+GGG | - | chr3_3:35595807-35595826 | None:intergenic | 25.0% |
| !! | TTGGAGTTTTTCATATAAGA+GGG | - | chr3_3:35596107-35596126 | None:intergenic | 25.0% |
| !! | ATTGGAGTTTTTCATATAAG+AGG | - | chr3_3:35596108-35596127 | None:intergenic | 25.0% |
| ! | ATATGAAAAACTCCAATTAG+GGG | + | chr3_3:35596111-35596130 | Msa0450220:intron | 25.0% |
| !! | CACTTTTAAATTCCACTTAT+TGG | + | chr3_3:35596339-35596358 | Msa0450220:intron | 25.0% |
| !!! | ACTTTTGAAGTTCTTAACTC+TGG | + | chr3_3:35594537-35594556 | Msa0450220:CDS | 30.0% |
| ! | GGACCTTCTTAGATATTTTT+AGG | + | chr3_3:35594696-35594715 | Msa0450220:intron | 30.0% |
| ! | ATATAGAGTGAGAGTGATTT+TGG | + | chr3_3:35594784-35594803 | Msa0450220:intron | 30.0% |
| TATTTAGCTACACATCATCA+TGG | - | chr3_3:35594888-35594907 | None:intergenic | 30.0% | |
| TGTAGCTAAATACTCTTTGT+TGG | + | chr3_3:35594896-35594915 | Msa0450220:intron | 30.0% | |
| GTAGCTAAATACTCTTTGTT+GGG | + | chr3_3:35594897-35594916 | Msa0450220:intron | 30.0% | |
| CTAGAGTAGCAATATATCTT+AGG | + | chr3_3:35595071-35595090 | Msa0450220:intron | 30.0% | |
| ! | ATCGACTTTGTTATCGTTTA+AGG | + | chr3_3:35595199-35595218 | Msa0450220:intron | 30.0% |
| ! | TCGACTTTGTTATCGTTTAA+GGG | + | chr3_3:35595200-35595219 | Msa0450220:intron | 30.0% |
| TTGTTATCGTTTAAGGGATT+TGG | + | chr3_3:35595206-35595225 | Msa0450220:intron | 30.0% | |
| TTACAAAGCTAGAATTCGTA+TGG | + | chr3_3:35595314-35595333 | Msa0450220:intron | 30.0% | |
| TAGAATTCGTATGGATCATT+AGG | + | chr3_3:35595323-35595342 | Msa0450220:intron | 30.0% | |
| TTTGAATTAACAGTGATGTG+GGG | - | chr3_3:35595806-35595825 | None:intergenic | 30.0% | |
| !! | GTTTTGAATTAACAGTGATG+TGG | - | chr3_3:35595808-35595827 | None:intergenic | 30.0% |
| ! | TGGAGTTTTTCATATAAGAG+GGG | - | chr3_3:35596106-35596125 | None:intergenic | 30.0% |
| AATTAGGGGAAGTTAAAAGT+GGG | + | chr3_3:35596125-35596144 | Msa0450220:intron | 30.0% | |
| !! | GTTCAATTTTTAGAAAGGGA+AGG | - | chr3_3:35596191-35596210 | None:intergenic | 30.0% |
| GAAATTACTTAGGGTATGTT+TGG | - | chr3_3:35596271-35596290 | None:intergenic | 30.0% | |
| ACATACCCTAAGTAATTTCT+AGG | + | chr3_3:35596272-35596291 | Msa0450220:intron | 30.0% | |
| AGGTTCCTAGAAATTACTTA+GGG | - | chr3_3:35596280-35596299 | None:intergenic | 30.0% | |
| AAGGTTCCTAGAAATTACTT+AGG | - | chr3_3:35596281-35596300 | None:intergenic | 30.0% | |
| !!! | ACTTTTGAAGTTCTTAACTC+TGG | + | chr3_3:35594537-35594556 | Msa0450220:CDS | 30.0% |
| ! | GGACCTTCTTAGATATTTTT+AGG | + | chr3_3:35594696-35594715 | Msa0450220:intron | 30.0% |
| ! | ATATAGAGTGAGAGTGATTT+TGG | + | chr3_3:35594784-35594803 | Msa0450220:intron | 30.0% |
| TATTTAGCTACACATCATCA+TGG | - | chr3_3:35594888-35594907 | None:intergenic | 30.0% | |
| TGTAGCTAAATACTCTTTGT+TGG | + | chr3_3:35594896-35594915 | Msa0450220:intron | 30.0% | |
| GTAGCTAAATACTCTTTGTT+GGG | + | chr3_3:35594897-35594916 | Msa0450220:intron | 30.0% | |
| CTAGAGTAGCAATATATCTT+AGG | + | chr3_3:35595071-35595090 | Msa0450220:intron | 30.0% | |
| ! | ATCGACTTTGTTATCGTTTA+AGG | + | chr3_3:35595199-35595218 | Msa0450220:intron | 30.0% |
| ! | TCGACTTTGTTATCGTTTAA+GGG | + | chr3_3:35595200-35595219 | Msa0450220:intron | 30.0% |
| TTGTTATCGTTTAAGGGATT+TGG | + | chr3_3:35595206-35595225 | Msa0450220:intron | 30.0% | |
| TTACAAAGCTAGAATTCGTA+TGG | + | chr3_3:35595314-35595333 | Msa0450220:intron | 30.0% | |
| TAGAATTCGTATGGATCATT+AGG | + | chr3_3:35595323-35595342 | Msa0450220:intron | 30.0% | |
| TTTGAATTAACAGTGATGTG+GGG | - | chr3_3:35595806-35595825 | None:intergenic | 30.0% | |
| !! | GTTTTGAATTAACAGTGATG+TGG | - | chr3_3:35595808-35595827 | None:intergenic | 30.0% |
| ! | TGGAGTTTTTCATATAAGAG+GGG | - | chr3_3:35596106-35596125 | None:intergenic | 30.0% |
| AATTAGGGGAAGTTAAAAGT+GGG | + | chr3_3:35596125-35596144 | Msa0450220:intron | 30.0% | |
| !! | GTTCAATTTTTAGAAAGGGA+AGG | - | chr3_3:35596191-35596210 | None:intergenic | 30.0% |
| GAAATTACTTAGGGTATGTT+TGG | - | chr3_3:35596271-35596290 | None:intergenic | 30.0% | |
| ACATACCCTAAGTAATTTCT+AGG | + | chr3_3:35596272-35596291 | Msa0450220:intron | 30.0% | |
| AGGTTCCTAGAAATTACTTA+GGG | - | chr3_3:35596280-35596299 | None:intergenic | 30.0% | |
| AAGGTTCCTAGAAATTACTT+AGG | - | chr3_3:35596281-35596300 | None:intergenic | 30.0% | |
| ! | CTTTGTTTCGTTACCAAATG+TGG | + | chr3_3:35594444-35594463 | Msa0450220:CDS | 35.0% |
| AAATTGCAGCTTCAGTTGTA+AGG | + | chr3_3:35594578-35594597 | Msa0450220:intron | 35.0% | |
| ATCTTCAAGGAATAGCAAGT+GGG | - | chr3_3:35594667-35594686 | None:intergenic | 35.0% | |
| TATCTTCAAGGAATAGCAAG+TGG | - | chr3_3:35594668-35594687 | None:intergenic | 35.0% | |
| GTCCCAACATAATATCTTCA+AGG | - | chr3_3:35594680-35594699 | None:intergenic | 35.0% | |
| TTGAGACATCACAAGTGTAA+TGG | + | chr3_3:35594829-35594848 | Msa0450220:intron | 35.0% | |
| CAATGAGATTCAAGATGCTT+TGG | + | chr3_3:35595026-35595045 | Msa0450220:intron | 35.0% | |
| ATGCTTTCGGATACTTAATC+AGG | + | chr3_3:35595150-35595169 | Msa0450220:intron | 35.0% | |
| TTATATCACTTTGGACACGA+AGG | + | chr3_3:35595261-35595280 | Msa0450220:intron | 35.0% | |
| ACGAATTACATCACAATGCA+CGG | + | chr3_3:35595560-35595579 | Msa0450220:intron | 35.0% | |
| ACACAATCTCGATCGTAAAA+AGG | + | chr3_3:35595608-35595627 | Msa0450220:intron | 35.0% | |
| CAAGAGTAAAAGAGAACCAA+TGG | + | chr3_3:35595664-35595683 | Msa0450220:intron | 35.0% | |
| !!! | CACTTTTAACTTCCCCTAAT+TGG | - | chr3_3:35596126-35596145 | None:intergenic | 35.0% |
| CAATTAGGGGAAGTTAAAAG+TGG | + | chr3_3:35596124-35596143 | Msa0450220:intron | 35.0% | |
| AGTTAAAAGTGGGTCTTGAA+AGG | + | chr3_3:35596135-35596154 | Msa0450220:intron | 35.0% | |
| !! | ATTTTTAGAAAGGGAAGGAG+AGG | - | chr3_3:35596186-35596205 | None:intergenic | 35.0% |
| ! | TATGTTTGGTACGAGAGTTT+TGG | - | chr3_3:35596257-35596276 | None:intergenic | 35.0% |
| !! | GTTGATTAGGTTGGTGAATT+GGG | - | chr3_3:35596309-35596328 | None:intergenic | 35.0% |
| !! | AGTTGATTAGGTTGGTGAAT+TGG | - | chr3_3:35596310-35596329 | None:intergenic | 35.0% |
| !! | CTGTAACAAGTTGATTAGGT+TGG | - | chr3_3:35596318-35596337 | None:intergenic | 35.0% |
| !! | GTGACTGTAACAAGTTGATT+AGG | - | chr3_3:35596322-35596341 | None:intergenic | 35.0% |
| ! | AGATTGTTGCTTCCAATAAG+TGG | - | chr3_3:35596354-35596373 | None:intergenic | 35.0% |
| ! | CTTTGTTTCGTTACCAAATG+TGG | + | chr3_3:35594444-35594463 | Msa0450220:CDS | 35.0% |
| AAATTGCAGCTTCAGTTGTA+AGG | + | chr3_3:35594578-35594597 | Msa0450220:intron | 35.0% | |
| ATCTTCAAGGAATAGCAAGT+GGG | - | chr3_3:35594667-35594686 | None:intergenic | 35.0% | |
| TATCTTCAAGGAATAGCAAG+TGG | - | chr3_3:35594668-35594687 | None:intergenic | 35.0% | |
| GTCCCAACATAATATCTTCA+AGG | - | chr3_3:35594680-35594699 | None:intergenic | 35.0% | |
| TTGAGACATCACAAGTGTAA+TGG | + | chr3_3:35594829-35594848 | Msa0450220:intron | 35.0% | |
| CAATGAGATTCAAGATGCTT+TGG | + | chr3_3:35595026-35595045 | Msa0450220:intron | 35.0% | |
| ATGCTTTCGGATACTTAATC+AGG | + | chr3_3:35595150-35595169 | Msa0450220:intron | 35.0% | |
| TTATATCACTTTGGACACGA+AGG | + | chr3_3:35595261-35595280 | Msa0450220:intron | 35.0% | |
| ACGAATTACATCACAATGCA+CGG | + | chr3_3:35595560-35595579 | Msa0450220:intron | 35.0% | |
| ACACAATCTCGATCGTAAAA+AGG | + | chr3_3:35595608-35595627 | Msa0450220:intron | 35.0% | |
| CAAGAGTAAAAGAGAACCAA+TGG | + | chr3_3:35595664-35595683 | Msa0450220:intron | 35.0% | |
| !!! | CACTTTTAACTTCCCCTAAT+TGG | - | chr3_3:35596126-35596145 | None:intergenic | 35.0% |
| CAATTAGGGGAAGTTAAAAG+TGG | + | chr3_3:35596124-35596143 | Msa0450220:intron | 35.0% | |
| AGTTAAAAGTGGGTCTTGAA+AGG | + | chr3_3:35596135-35596154 | Msa0450220:intron | 35.0% | |
| !! | ATTTTTAGAAAGGGAAGGAG+AGG | - | chr3_3:35596186-35596205 | None:intergenic | 35.0% |
| ! | TATGTTTGGTACGAGAGTTT+TGG | - | chr3_3:35596257-35596276 | None:intergenic | 35.0% |
| !! | GTTGATTAGGTTGGTGAATT+GGG | - | chr3_3:35596309-35596328 | None:intergenic | 35.0% |
| !! | AGTTGATTAGGTTGGTGAAT+TGG | - | chr3_3:35596310-35596329 | None:intergenic | 35.0% |
| !! | CTGTAACAAGTTGATTAGGT+TGG | - | chr3_3:35596318-35596337 | None:intergenic | 35.0% |
| !! | GTGACTGTAACAAGTTGATT+AGG | - | chr3_3:35596322-35596341 | None:intergenic | 35.0% |
| ! | AGATTGTTGCTTCCAATAAG+TGG | - | chr3_3:35596354-35596373 | None:intergenic | 35.0% |
| TACATCTGAACTGCCACATT+TGG | - | chr3_3:35594460-35594479 | None:intergenic | 40.0% | |
| TTCAAGTGAGAGAATGCATG+AGG | - | chr3_3:35594504-35594523 | None:intergenic | 40.0% | |
| AGCTGCAATTTGAGCAAGAA+CGG | - | chr3_3:35594569-35594588 | None:intergenic | 40.0% | |
| TTGTAAGGTTTGTACGTCAC+TGG | + | chr3_3:35594593-35594612 | Msa0450220:intron | 40.0% | |
| !! | AGCAAGTGGGCTATTTATAG+AGG | - | chr3_3:35594654-35594673 | None:intergenic | 40.0% |
| !! | GTGAGAGTGATTTTGGAAGT+TGG | + | chr3_3:35594791-35594810 | Msa0450220:intron | 40.0% |
| CACTTGTGATGTCTCAACAA+AGG | - | chr3_3:35594826-35594845 | None:intergenic | 40.0% | |
| !! | CAAGGATGGATTGAAAAGGA+AGG | - | chr3_3:35594857-35594876 | None:intergenic | 40.0% |
| !! | CTTGCAAGGATGGATTGAAA+AGG | - | chr3_3:35594861-35594880 | None:intergenic | 40.0% |
| ! | CTTTTCAATCCATCCTTGCA+AGG | + | chr3_3:35594859-35594878 | Msa0450220:intron | 40.0% |
| ATACTCTTTGTTGGGATGAG+AGG | + | chr3_3:35594905-35594924 | Msa0450220:intron | 40.0% | |
| TTTCGGATACTTAATCAGGC+TGG | + | chr3_3:35595154-35595173 | Msa0450220:intron | 40.0% | |
| ATACTTAATCAGGCTGGACA+CGG | + | chr3_3:35595160-35595179 | Msa0450220:intron | 40.0% | |
| ATTTGTGTATCGTCTCCACA+GGG | - | chr3_3:35595517-35595536 | None:intergenic | 40.0% | |
| TATTTGTGTATCGTCTCCAC+AGG | - | chr3_3:35595518-35595537 | None:intergenic | 40.0% | |
| CGAATTACATCACAATGCAC+GGG | + | chr3_3:35595561-35595580 | Msa0450220:intron | 40.0% | |
| ATTGTGTTTCCGCTTCAAAC+CGG | - | chr3_3:35595595-35595614 | None:intergenic | 40.0% | |
| CAATCTCGATCGTAAAAAGG+CGG | + | chr3_3:35595611-35595630 | Msa0450220:intron | 40.0% | |
| ! | TTCTCTTTTACTCTTGCGAC+AGG | - | chr3_3:35595660-35595679 | None:intergenic | 40.0% |
| GAGTAAAAGAGAACCAATGG+TGG | + | chr3_3:35595667-35595686 | Msa0450220:intron | 40.0% | |
| !! | CGAAGTTGTCAAGGTGTTTT+GGG | - | chr3_3:35595736-35595755 | None:intergenic | 40.0% |
| !! | TCGAAGTTGTCAAGGTGTTT+TGG | - | chr3_3:35595737-35595756 | None:intergenic | 40.0% |
| TGTTGAGTTCGAAGTTGTCA+AGG | - | chr3_3:35595745-35595764 | None:intergenic | 40.0% | |
| CAACAAAGTAGCACTATGGT+TGG | + | chr3_3:35595847-35595866 | Msa0450220:intron | 40.0% | |
| ! | GTTGGAAGAGTGGTTTTTAC+AGG | + | chr3_3:35595865-35595884 | Msa0450220:intron | 40.0% |
| !!! | TTTGGTACGAGAGTTTTGGA+GGG | - | chr3_3:35596253-35596272 | None:intergenic | 40.0% |
| AGGCAATATGCATGCAGATT+TGG | - | chr3_3:35596417-35596436 | None:intergenic | 40.0% | |
| TACATCTGAACTGCCACATT+TGG | - | chr3_3:35594460-35594479 | None:intergenic | 40.0% | |
| TTCAAGTGAGAGAATGCATG+AGG | - | chr3_3:35594504-35594523 | None:intergenic | 40.0% | |
| AGCTGCAATTTGAGCAAGAA+CGG | - | chr3_3:35594569-35594588 | None:intergenic | 40.0% | |
| TTGTAAGGTTTGTACGTCAC+TGG | + | chr3_3:35594593-35594612 | Msa0450220:intron | 40.0% | |
| !! | AGCAAGTGGGCTATTTATAG+AGG | - | chr3_3:35594654-35594673 | None:intergenic | 40.0% |
| !! | GTGAGAGTGATTTTGGAAGT+TGG | + | chr3_3:35594791-35594810 | Msa0450220:intron | 40.0% |
| CACTTGTGATGTCTCAACAA+AGG | - | chr3_3:35594826-35594845 | None:intergenic | 40.0% | |
| !! | CAAGGATGGATTGAAAAGGA+AGG | - | chr3_3:35594857-35594876 | None:intergenic | 40.0% |
| !! | CTTGCAAGGATGGATTGAAA+AGG | - | chr3_3:35594861-35594880 | None:intergenic | 40.0% |
| ! | CTTTTCAATCCATCCTTGCA+AGG | + | chr3_3:35594859-35594878 | Msa0450220:intron | 40.0% |
| ATACTCTTTGTTGGGATGAG+AGG | + | chr3_3:35594905-35594924 | Msa0450220:intron | 40.0% | |
| TTTCGGATACTTAATCAGGC+TGG | + | chr3_3:35595154-35595173 | Msa0450220:intron | 40.0% | |
| ATACTTAATCAGGCTGGACA+CGG | + | chr3_3:35595160-35595179 | Msa0450220:intron | 40.0% | |
| ATTTGTGTATCGTCTCCACA+GGG | - | chr3_3:35595517-35595536 | None:intergenic | 40.0% | |
| TATTTGTGTATCGTCTCCAC+AGG | - | chr3_3:35595518-35595537 | None:intergenic | 40.0% | |
| CGAATTACATCACAATGCAC+GGG | + | chr3_3:35595561-35595580 | Msa0450220:intron | 40.0% | |
| ATTGTGTTTCCGCTTCAAAC+CGG | - | chr3_3:35595595-35595614 | None:intergenic | 40.0% | |
| CAATCTCGATCGTAAAAAGG+CGG | + | chr3_3:35595611-35595630 | Msa0450220:intron | 40.0% | |
| ! | TTCTCTTTTACTCTTGCGAC+AGG | - | chr3_3:35595660-35595679 | None:intergenic | 40.0% |
| GAGTAAAAGAGAACCAATGG+TGG | + | chr3_3:35595667-35595686 | Msa0450220:intron | 40.0% | |
| !! | CGAAGTTGTCAAGGTGTTTT+GGG | - | chr3_3:35595736-35595755 | None:intergenic | 40.0% |
| !! | TCGAAGTTGTCAAGGTGTTT+TGG | - | chr3_3:35595737-35595756 | None:intergenic | 40.0% |
| TGTTGAGTTCGAAGTTGTCA+AGG | - | chr3_3:35595745-35595764 | None:intergenic | 40.0% | |
| CAACAAAGTAGCACTATGGT+TGG | + | chr3_3:35595847-35595866 | Msa0450220:intron | 40.0% | |
| ! | GTTGGAAGAGTGGTTTTTAC+AGG | + | chr3_3:35595865-35595884 | Msa0450220:intron | 40.0% |
| !!! | TTTGGTACGAGAGTTTTGGA+GGG | - | chr3_3:35596253-35596272 | None:intergenic | 40.0% |
| AGGCAATATGCATGCAGATT+TGG | - | chr3_3:35596417-35596436 | None:intergenic | 40.0% | |
| ATCATCATGGAAGCCTTGCA+AGG | - | chr3_3:35594875-35594894 | None:intergenic | 45.0% | |
| ATTAGGTTACGTGTGACGCT+TGG | + | chr3_3:35595340-35595359 | Msa0450220:intron | 45.0% | |
| TTACGTGTGACGCTTGGTTA+AGG | + | chr3_3:35595346-35595365 | Msa0450220:intron | 45.0% | |
| TTGGTGTGGGCATCACTAAA+TGG | - | chr3_3:35595778-35595797 | None:intergenic | 45.0% | |
| ! | AAACAGCACCCACAAGTTGA+CGG | + | chr3_3:35595824-35595843 | Msa0450220:intron | 45.0% |
| CTTTGTTGCCGTCAACTTGT+GGG | - | chr3_3:35595835-35595854 | None:intergenic | 45.0% | |
| ACTTTGTTGCCGTCAACTTG+TGG | - | chr3_3:35595836-35595855 | None:intergenic | 45.0% | |
| ACGGCAACAAAGTAGCACTA+TGG | + | chr3_3:35595843-35595862 | Msa0450220:intron | 45.0% | |
| TAGCACTATGGTTGGAAGAG+TGG | + | chr3_3:35595855-35595874 | Msa0450220:intron | 45.0% | |
| !!! | TTGGTACGAGAGTTTTGGAG+GGG | - | chr3_3:35596252-35596271 | None:intergenic | 45.0% |
| !! | GTTTGGTACGAGAGTTTTGG+AGG | - | chr3_3:35596254-35596273 | None:intergenic | 45.0% |
| ! | GTTGGTGAATTGGGACGAAA+AGG | - | chr3_3:35596300-35596319 | None:intergenic | 45.0% |
| GCATACTGCCATCTTCATCT+CGG | + | chr3_3:35596462-35596481 | Msa0450220:CDS | 45.0% | |
| ! | TTAAAGGAAGAGTGTGCCTG+AGG | - | chr3_3:35596503-35596522 | None:intergenic | 45.0% |
| ATCATCATGGAAGCCTTGCA+AGG | - | chr3_3:35594875-35594894 | None:intergenic | 45.0% | |
| ATTAGGTTACGTGTGACGCT+TGG | + | chr3_3:35595340-35595359 | Msa0450220:intron | 45.0% | |
| TTACGTGTGACGCTTGGTTA+AGG | + | chr3_3:35595346-35595365 | Msa0450220:intron | 45.0% | |
| TTGGTGTGGGCATCACTAAA+TGG | - | chr3_3:35595778-35595797 | None:intergenic | 45.0% | |
| ! | AAACAGCACCCACAAGTTGA+CGG | + | chr3_3:35595824-35595843 | Msa0450220:intron | 45.0% |
| CTTTGTTGCCGTCAACTTGT+GGG | - | chr3_3:35595835-35595854 | None:intergenic | 45.0% | |
| ACTTTGTTGCCGTCAACTTG+TGG | - | chr3_3:35595836-35595855 | None:intergenic | 45.0% | |
| ACGGCAACAAAGTAGCACTA+TGG | + | chr3_3:35595843-35595862 | Msa0450220:intron | 45.0% | |
| TAGCACTATGGTTGGAAGAG+TGG | + | chr3_3:35595855-35595874 | Msa0450220:intron | 45.0% | |
| !!! | TTGGTACGAGAGTTTTGGAG+GGG | - | chr3_3:35596252-35596271 | None:intergenic | 45.0% |
| !! | GTTTGGTACGAGAGTTTTGG+AGG | - | chr3_3:35596254-35596273 | None:intergenic | 45.0% |
| ! | GTTGGTGAATTGGGACGAAA+AGG | - | chr3_3:35596300-35596319 | None:intergenic | 45.0% |
| GCATACTGCCATCTTCATCT+CGG | + | chr3_3:35596462-35596481 | Msa0450220:CDS | 45.0% | |
| ! | TTAAAGGAAGAGTGTGCCTG+AGG | - | chr3_3:35596503-35596522 | None:intergenic | 45.0% |
| TCATGGAAGCCTTGCAAGGA+TGG | - | chr3_3:35594871-35594890 | None:intergenic | 50.0% | |
| ! | GAACCAATGGTGGAGCGAAA+CGG | + | chr3_3:35595677-35595696 | Msa0450220:intron | 50.0% |
| GTGTGGGCATCACTAAATGG+TGG | - | chr3_3:35595775-35595794 | None:intergenic | 50.0% | |
| !! | ATGTGGGGTGTTGTTGGTGT+GGG | - | chr3_3:35595791-35595810 | None:intergenic | 50.0% |
| !! | ACAGTGATGTGGGGTGTTGT+TGG | - | chr3_3:35595797-35595816 | None:intergenic | 50.0% |
| !!! | AGTTTTGGAGGGGAGGGAAA+GGG | - | chr3_3:35596242-35596261 | None:intergenic | 50.0% |
| !!! | TACGAGAGTTTTGGAGGGGA+GGG | - | chr3_3:35596248-35596267 | None:intergenic | 50.0% |
| ! | TGCAGCTGCTGCTTGGAAAA+GGG | - | chr3_3:35596441-35596460 | None:intergenic | 50.0% |
| ! | TTGCAGCTGCTGCTTGGAAA+AGG | - | chr3_3:35596442-35596461 | None:intergenic | 50.0% |
| GTTGTGCTCCGAGATGAAGA+TGG | - | chr3_3:35596473-35596492 | None:intergenic | 50.0% | |
| TCATGGAAGCCTTGCAAGGA+TGG | - | chr3_3:35594871-35594890 | None:intergenic | 50.0% | |
| ! | GAACCAATGGTGGAGCGAAA+CGG | + | chr3_3:35595677-35595696 | Msa0450220:intron | 50.0% |
| GTGTGGGCATCACTAAATGG+TGG | - | chr3_3:35595775-35595794 | None:intergenic | 50.0% | |
| !! | ATGTGGGGTGTTGTTGGTGT+GGG | - | chr3_3:35595791-35595810 | None:intergenic | 50.0% |
| !! | ACAGTGATGTGGGGTGTTGT+TGG | - | chr3_3:35595797-35595816 | None:intergenic | 50.0% |
| !!! | AGTTTTGGAGGGGAGGGAAA+GGG | - | chr3_3:35596242-35596261 | None:intergenic | 50.0% |
| !!! | TACGAGAGTTTTGGAGGGGA+GGG | - | chr3_3:35596248-35596267 | None:intergenic | 50.0% |
| ! | TGCAGCTGCTGCTTGGAAAA+GGG | - | chr3_3:35596441-35596460 | None:intergenic | 50.0% |
| ! | TTGCAGCTGCTGCTTGGAAA+AGG | - | chr3_3:35596442-35596461 | None:intergenic | 50.0% |
| GTTGTGCTCCGAGATGAAGA+TGG | - | chr3_3:35596473-35596492 | None:intergenic | 50.0% | |
| ATAGAGGTCTGCCTTGCCTG+AGG | - | chr3_3:35594638-35594657 | None:intergenic | 55.0% | |
| TGTCCACACACTACTCCCTG+TGG | + | chr3_3:35595499-35595518 | Msa0450220:intron | 55.0% | |
| TCTCCACAGGGAGTAGTGTG+TGG | - | chr3_3:35595505-35595524 | None:intergenic | 55.0% | |
| !! | GATGTGGGGTGTTGTTGGTG+TGG | - | chr3_3:35595792-35595811 | None:intergenic | 55.0% |
| GAAAGGGAAGGAGAGGTGAG+AGG | - | chr3_3:35596179-35596198 | None:intergenic | 55.0% | |
| !!! | GAGTTTTGGAGGGGAGGGAA+AGG | - | chr3_3:35596243-35596262 | None:intergenic | 55.0% |
| !!! | GTACGAGAGTTTTGGAGGGG+AGG | - | chr3_3:35596249-35596268 | None:intergenic | 55.0% |
| ! | GCTGCTGCTTGGAAAAGGGA+AGG | - | chr3_3:35596437-35596456 | None:intergenic | 55.0% |
| GTATGCTTGCAGCTGCTGCT+TGG | - | chr3_3:35596448-35596467 | None:intergenic | 55.0% | |
| GAGCACAACACCTATGCCTC+AGG | + | chr3_3:35596484-35596503 | Msa0450220:CDS | 55.0% | |
| ! | GAAGAGTGTGCCTGAGGCAT+AGG | - | chr3_3:35596497-35596516 | None:intergenic | 55.0% |
| ATAGAGGTCTGCCTTGCCTG+AGG | - | chr3_3:35594638-35594657 | None:intergenic | 55.0% | |
| TGTCCACACACTACTCCCTG+TGG | + | chr3_3:35595499-35595518 | Msa0450220:intron | 55.0% | |
| TCTCCACAGGGAGTAGTGTG+TGG | - | chr3_3:35595505-35595524 | None:intergenic | 55.0% | |
| !! | GATGTGGGGTGTTGTTGGTG+TGG | - | chr3_3:35595792-35595811 | None:intergenic | 55.0% |
| GAAAGGGAAGGAGAGGTGAG+AGG | - | chr3_3:35596179-35596198 | None:intergenic | 55.0% | |
| !!! | GAGTTTTGGAGGGGAGGGAA+AGG | - | chr3_3:35596243-35596262 | None:intergenic | 55.0% |
| !!! | GTACGAGAGTTTTGGAGGGG+AGG | - | chr3_3:35596249-35596268 | None:intergenic | 55.0% |
| ! | GCTGCTGCTTGGAAAAGGGA+AGG | - | chr3_3:35596437-35596456 | None:intergenic | 55.0% |
| GTATGCTTGCAGCTGCTGCT+TGG | - | chr3_3:35596448-35596467 | None:intergenic | 55.0% | |
| GAGCACAACACCTATGCCTC+AGG | + | chr3_3:35596484-35596503 | Msa0450220:CDS | 55.0% | |
| ! | GAAGAGTGTGCCTGAGGCAT+AGG | - | chr3_3:35596497-35596516 | None:intergenic | 55.0% |
| CAGGCTGGACACGGTCGATT+AGG | + | chr3_3:35595169-35595188 | Msa0450220:intron | 60.0% | |
| !! | GCAGCGAAGCCGGTTTGAAG+CGG | + | chr3_3:35595583-35595602 | Msa0450220:intron | 60.0% |
| CCACCGTTTCGCTCCACCAT+TGG | - | chr3_3:35595683-35595702 | None:intergenic | 60.0% | |
| ! | CCAATGGTGGAGCGAAACGG+TGG | + | chr3_3:35595680-35595699 | Msa0450220:intron | 60.0% |
| GGAAGGAGAGGTGAGAGGAG+GGG | - | chr3_3:35596174-35596193 | None:intergenic | 60.0% | |
| GGGAAGGAGAGGTGAGAGGA+GGG | - | chr3_3:35596175-35596194 | None:intergenic | 60.0% | |
| AGGGAAGGAGAGGTGAGAGG+AGG | - | chr3_3:35596176-35596195 | None:intergenic | 60.0% | |
| TTGGAGGGGAGGGAAAGGGA+GGG | - | chr3_3:35596238-35596257 | None:intergenic | 60.0% | |
| TTTGGAGGGGAGGGAAAGGG+AGG | - | chr3_3:35596239-35596258 | None:intergenic | 60.0% | |
| CAGGCTGGACACGGTCGATT+AGG | + | chr3_3:35595169-35595188 | Msa0450220:intron | 60.0% | |
| !! | GCAGCGAAGCCGGTTTGAAG+CGG | + | chr3_3:35595583-35595602 | Msa0450220:intron | 60.0% |
| CCACCGTTTCGCTCCACCAT+TGG | - | chr3_3:35595683-35595702 | None:intergenic | 60.0% | |
| ! | CCAATGGTGGAGCGAAACGG+TGG | + | chr3_3:35595680-35595699 | Msa0450220:intron | 60.0% |
| GGAAGGAGAGGTGAGAGGAG+GGG | - | chr3_3:35596174-35596193 | None:intergenic | 60.0% | |
| GGGAAGGAGAGGTGAGAGGA+GGG | - | chr3_3:35596175-35596194 | None:intergenic | 60.0% | |
| AGGGAAGGAGAGGTGAGAGG+AGG | - | chr3_3:35596176-35596195 | None:intergenic | 60.0% | |
| TTGGAGGGGAGGGAAAGGGA+GGG | - | chr3_3:35596238-35596257 | None:intergenic | 60.0% | |
| TTTGGAGGGGAGGGAAAGGG+AGG | - | chr3_3:35596239-35596258 | None:intergenic | 60.0% | |
| TAGCACGCAGCTGCGACCTC+AGG | + | chr3_3:35594619-35594638 | Msa0450220:intron | 65.0% | |
| CAATGCACGGGCAGCGAAGC+CGG | + | chr3_3:35595573-35595592 | Msa0450220:intron | 65.0% | |
| GAGAGGTGAGAGGAGGGGAG+GGG | - | chr3_3:35596169-35596188 | None:intergenic | 65.0% | |
| GGAGAGGTGAGAGGAGGGGA+GGG | - | chr3_3:35596170-35596189 | None:intergenic | 65.0% | |
| AGGAGAGGTGAGAGGAGGGG+AGG | - | chr3_3:35596171-35596190 | None:intergenic | 65.0% | |
| TAGCACGCAGCTGCGACCTC+AGG | + | chr3_3:35594619-35594638 | Msa0450220:intron | 65.0% | |
| CAATGCACGGGCAGCGAAGC+CGG | + | chr3_3:35595573-35595592 | Msa0450220:intron | 65.0% | |
| GAGAGGTGAGAGGAGGGGAG+GGG | - | chr3_3:35596169-35596188 | None:intergenic | 65.0% | |
| GGAGAGGTGAGAGGAGGGGA+GGG | - | chr3_3:35596170-35596189 | None:intergenic | 65.0% | |
| AGGAGAGGTGAGAGGAGGGG+AGG | - | chr3_3:35596171-35596190 | None:intergenic | 65.0% | |
| CGCAGCTGCGACCTCAGGCA+AGG | + | chr3_3:35594624-35594643 | Msa0450220:intron | 70.0% | |
| CGCAGCTGCGACCTCAGGCA+AGG | + | chr3_3:35594624-35594643 | Msa0450220:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 35594390 | 35596522 | 35594390 | ID=Msa0450220;Name=Msa0450220 |
| chr3_3 | mRNA | 35594390 | 35596522 | 35594390 | ID=Msa0450220-mRNA-1;Parent=Msa0450220;Name=Msa0450220-mRNA-1;_AED=0.70;_eAED=0.70;_QI=0|0|0|0.5|0|0|2|0|97 |
| chr3_3 | exon | 35594390 | 35594558 | 35594390 | ID=Msa0450220-mRNA-1:exon:6434;Parent=Msa0450220-mRNA-1 |
| chr3_3 | exon | 35596398 | 35596522 | 35596398 | ID=Msa0450220-mRNA-1:exon:6435;Parent=Msa0450220-mRNA-1 |
| chr3_3 | CDS | 35594390 | 35594558 | 35594390 | ID=Msa0450220-mRNA-1:cds;Parent=Msa0450220-mRNA-1 |
| chr3_3 | CDS | 35596398 | 35596522 | 35596398 | ID=Msa0450220-mRNA-1:cds;Parent=Msa0450220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
