AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0645780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645780 MtrunA17_Chr4g0033851 98.119 319 5 1 1 318 1 319 0.0 624
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645780 AT1G65260.1 71.284 296 79 4 27 318 37 330 8.13e-148 419
Msa0645780 AT1G65260.2 76.834 259 58 1 62 318 1 259 1.23e-144 408

Find 88 sgRNAs with CRISPR-Local

Find 514 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGGAAACAAGCAATATT+TGG 0.163647 4_3:+51225734 None:intergenic
TGAGGATCCCGAGAAAATTT+TGG 0.219648 4_3:-51233286 Msa0645780:CDS
TTCCATATCCATGCAGATTT+AGG 0.230495 4_3:+51225679 None:intergenic
TTCCCTTAGCCCATTGAAAA+AGG 0.267892 4_3:-51233884 Msa0645780:five_prime_UTR
GTCCTAAATCTGCATGGATA+TGG 0.285046 4_3:-51225681 Msa0645780:three_prime_UTR
GTCCTGGTGCTACTTCTTCC+AGG 0.338841 4_3:+51226346 None:intergenic
TTATATTCTCCACATAAATC+TGG 0.363771 4_3:+51225773 None:intergenic
CCATGCAGATTTAGGACTTC+GGG 0.367812 4_3:+51225687 None:intergenic
CTTCATTCCTCTGAATTTCA+CGG 0.381591 4_3:+51233501 None:intergenic
TGCTATTGTAAGTTCGTTTG+AGG 0.410005 4_3:-51233304 Msa0645780:CDS
AACCAAGGTGAGTGAGATGC+TGG 0.429792 4_3:-51229457 Msa0645780:CDS
CACAACTTGCTCTTCAGAAA+GGG 0.431308 4_3:-51232221 Msa0645780:CDS
AGCTCAACTTGATCAGCAAA+AGG 0.437200 4_3:-51231496 Msa0645780:CDS
CCTCTCGCCACTTCCTTCTT+CGG 0.437920 4_3:-51233630 Msa0645780:CDS
AATTTGAAGAAAGAATTATC+TGG 0.438007 4_3:-51226657 Msa0645780:CDS
TTTCAATGGGCTAAGGGAAG+GGG 0.442840 4_3:+51233888 None:intergenic
GCGAAGCCGGTGCGAGGTGG+AGG 0.444588 4_3:-51233475 Msa0645780:CDS
GGATATGGAAAAGCAGTATT+CGG 0.452337 4_3:-51225666 Msa0645780:three_prime_UTR
GGTGGAGGAGCGATTGGTGC+AGG 0.452523 4_3:-51233460 Msa0645780:CDS
AAACTTTGCAGATTGAGCTC+TGG 0.463191 4_3:+51229580 None:intergenic
AGGAATGAAGATTGCGAAGC+CGG 0.463659 4_3:-51233488 Msa0645780:CDS
CAGAAAGGAGAGCTTCCTCC+TGG 0.470715 4_3:-51226364 Msa0645780:CDS
AGATATTGCTTGCGATTTCG+AGG 0.471593 4_3:+51233794 None:intergenic
GAAACAAGCAATATTTGGAT+TGG 0.476047 4_3:+51225739 None:intergenic
TCCTTCTTCGGCACCAGACC+AGG 0.477743 4_3:-51233618 Msa0645780:intron
GAAGAGTTGTTTGAAGATGA+TGG 0.481607 4_3:+51233761 None:intergenic
AACTAACTTGTGCTGTAGCT+TGG 0.486023 4_3:+51233220 None:intergenic
ACCTGGTCTGGTGCCGAAGA+AGG 0.487099 4_3:+51233617 None:intergenic
GCACAACTTGCTCTTCAGAA+AGG 0.497443 4_3:-51232222 Msa0645780:CDS
TCCCAGCATCTCACTCACCT+TGG 0.500851 4_3:+51229455 None:intergenic
AAGTTGAGCTTTCAAAGCAC+TGG 0.504664 4_3:+51231509 None:intergenic
ACATGTTTACATCCAAAGTC+AGG 0.513037 4_3:+51225922 None:intergenic
ACTTCATAGCCAGATTTATG+TGG 0.517264 4_3:-51225782 Msa0645780:three_prime_UTR
TCCATGCAGATTTAGGACTT+CGG 0.518380 4_3:+51225686 None:intergenic
GAAGATTGAAGTGGTGCGGA+GGG 0.523856 4_3:+51233675 None:intergenic
GTGCGAGGTGGAGGAGCGAT+TGG 0.524184 4_3:-51233466 Msa0645780:CDS
CTCCTGGAAGAAGTAGCACC+AGG 0.524274 4_3:-51226348 Msa0645780:CDS
AGAAGATTGAAGTGGTGCGG+AGG 0.527050 4_3:+51233674 None:intergenic
CTGACCTAGAGCTTCAGCTT+GGG 0.528527 4_3:+51228686 None:intergenic
GGAAGAAGTAGCACCAGGAC+TGG 0.531256 4_3:-51226343 Msa0645780:CDS
TTGACAAGTGATGATCTTGA+AGG 0.534037 4_3:-51228663 Msa0645780:CDS
ACTGACCTAGAGCTTCAGCT+TGG 0.535103 4_3:+51228685 None:intergenic
AGAAGAAGATTGAAGTGGTG+CGG 0.538986 4_3:+51233671 None:intergenic
TCAGGAGGCGAGGTCGAAGA+AGG 0.540578 4_3:-51229615 Msa0645780:CDS
TTCAATGGGCTAAGGGAAGG+GGG 0.543947 4_3:+51233889 None:intergenic
ATTCTTTCTTCAAATTTGCA+AGG 0.545092 4_3:+51226664 None:intergenic
TCAATATCAGCATCTCGTAA+TGG 0.547460 4_3:+51226316 None:intergenic
TTCCTTTAGGACTTCAACCA+AGG 0.549139 4_3:-51229472 Msa0645780:intron
TCGGCGCAAGAAGGATGCAC+TGG 0.554227 4_3:-51225647 Msa0645780:three_prime_UTR
GAGTCCCAAGCTGAAGCTCT+AGG 0.554752 4_3:-51228690 Msa0645780:CDS
AAGTGATGATCTTGAAGGGA+AGG 0.560391 4_3:-51228658 Msa0645780:intron
TCTGGTGCCGAAGAAGGAAG+TGG 0.564814 4_3:+51233623 None:intergenic
TCGTAATGGAGTTCCAGTCC+TGG 0.567030 4_3:+51226330 None:intergenic
GCTCAACTTGATCAGCAAAA+GGG 0.571576 4_3:-51231495 Msa0645780:CDS
GAAAATGAGAGAACCTGGTC+TGG 0.577981 4_3:+51233605 None:intergenic
TATCTTAATAGTTATGACAA+TGG 0.579106 4_3:-51228712 Msa0645780:intron
ATCGCTCCTCCACCTCGCAC+CGG 0.579617 4_3:+51233469 None:intergenic
AGAATTATCTGGTAGCTCAA+AGG 0.583210 4_3:-51226646 Msa0645780:intron
CCCGAAGTCCTAAATCTGCA+TGG 0.585281 4_3:-51225687 Msa0645780:three_prime_UTR
TGACAAGTGATGATCTTGAA+GGG 0.586970 4_3:-51228662 Msa0645780:CDS
CGAGAGGAATATCTTTCACA+AGG 0.588360 4_3:-51233841 Msa0645780:five_prime_UTR
TGAAGTCTGCGTAGTTATGT+CGG 0.589372 4_3:+51225799 None:intergenic
AAGCAGTATTCGGCGCAAGA+AGG 0.590887 4_3:-51225656 Msa0645780:three_prime_UTR
ATTGCGAAGCCGGTGCGAGG+TGG 0.597770 4_3:-51233478 Msa0645780:CDS
CAACACAAGCTTCTGAAGAG+TGG 0.599112 4_3:-51232341 Msa0645780:intron
ACGAGATGCTGATATTGAGA+TGG 0.599296 4_3:-51226311 Msa0645780:CDS
GAGGAAGAAGAAGATTGAAG+TGG 0.604277 4_3:+51233666 None:intergenic
AAGATTTACGAGAGTCGTGA+AGG 0.612658 4_3:-51233422 Msa0645780:intron
GAGAGGCTTTCTGAGAGAAG+AGG 0.612773 4_3:+51233647 None:intergenic
AAGATTGCGAAGCCGGTGCG+AGG 0.617109 4_3:-51233481 Msa0645780:CDS
CGCAAACATCGAAGAACGAG+AGG 0.617984 4_3:-51233857 Msa0645780:five_prime_UTR
ACAACTTGCTCTTCAGAAAG+GGG 0.619190 4_3:-51232220 Msa0645780:CDS
TTTCTACTTTCTAACCGCAA+CGG 0.619219 4_3:+51225574 None:intergenic
ACCAAGGTGAGTGAGATGCT+GGG 0.621819 4_3:-51229456 Msa0645780:CDS
ACGGATGGAAAATAAATACA+AGG 0.623103 4_3:-51232367 Msa0645780:CDS
TTTGGAGAGTAAAATTCAGG+AGG 0.632036 4_3:-51229630 Msa0645780:CDS
TCAACTGAGACAAAGATCAA+AGG 0.633129 4_3:-51226281 Msa0645780:CDS
GCAAACACCGTGAAATTCAG+AGG 0.634304 4_3:-51233508 Msa0645780:CDS
GGATGTAAACATGTTCAATG+AGG 0.634606 4_3:-51225913 Msa0645780:three_prime_UTR
CCGAAGAAGGAAGTGGCGAG+AGG 0.648845 4_3:+51233630 None:intergenic
ACAGTCTTGTCTCAAATACA+CGG 0.649426 4_3:-51231464 Msa0645780:CDS
AGAGTAAAATTCAGGAGGCG+AGG 0.657033 4_3:-51229625 Msa0645780:CDS
CAGTCTTGTCTCAAATACAC+GGG 0.662428 4_3:-51231463 Msa0645780:intron
CTGGGAAATGTCAATACAAG+TGG 0.671165 4_3:-51229438 Msa0645780:CDS
AACATGTTCAATGAGGAGCA+AGG 0.686791 4_3:-51225906 Msa0645780:three_prime_UTR
TTGCTCGTGAAGCACTTAAG+CGG 0.691632 4_3:-51232188 Msa0645780:CDS
TGTTTACATCCAAAGTCAGG+AGG 0.695060 4_3:+51225925 None:intergenic
CTGGTGCTACTTCTTCCAGG+AGG 0.748881 4_3:+51226349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG + chr4_3:51231391-51231410 None:intergenic 0.0%
!!! TGTATTTTATTACATTAATT+GGG + chr4_3:51230618-51230637 None:intergenic 10.0%
!! AATAAATTAAAATAAACCAA+GGG + chr4_3:51231153-51231172 None:intergenic 10.0%
!! AAATAAATTAAAATAAACCA+AGG + chr4_3:51231154-51231173 None:intergenic 10.0%
!! GTAGTTTATTAAAAAAAAAT+TGG - chr4_3:51231648-51231667 Msa0645780:intron 10.0%
!!! TTTTTTCTATAATTTGAATT+CGG + chr4_3:51233862-51233881 None:intergenic 10.0%
!! TTCTTATCATTGTTATATAT+TGG - chr4_3:51226303-51226322 Msa0645780:CDS 15.0%
!! TGTATATGAATTTCTAAATT+TGG - chr4_3:51228636-51228655 Msa0645780:intron 15.0%
!!! TTCAATTTAACTTAACTTTT+TGG - chr4_3:51228796-51228815 Msa0645780:intron 15.0%
!! AAATTACTAAAACAAACATA+GGG + chr4_3:51228936-51228955 None:intergenic 15.0%
!! AAAATTACTAAAACAAACAT+AGG + chr4_3:51228937-51228956 None:intergenic 15.0%
!!! CTGTATTTTATTACATTAAT+TGG + chr4_3:51230619-51230638 None:intergenic 15.0%
!! CAATTAATGTAATAAAATAC+AGG - chr4_3:51230617-51230636 Msa0645780:intron 15.0%
!! TTCACAATTATACAAAAATT+TGG + chr4_3:51231023-51231042 None:intergenic 15.0%
!!! AATTTATTTCTTATGAGAAA+TGG - chr4_3:51231165-51231184 Msa0645780:intron 15.0%
!!! ATTTATTTCTTATGAGAAAT+GGG - chr4_3:51231166-51231185 Msa0645780:intron 15.0%
!! TACATAGGAAATATAAAATT+AGG + chr4_3:51231207-51231226 None:intergenic 15.0%
!! TTTAAATAACATCTTTACAT+AGG + chr4_3:51231222-51231241 None:intergenic 15.0%
!!! TTCAACAATTATTTTTTGAA+CGG - chr4_3:51231365-51231384 Msa0645780:intron 15.0%
!! ATTCTGATTAATTTATATGT+AGG + chr4_3:51232032-51232051 None:intergenic 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr4_3:51232036-51232055 Msa0645780:intron 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr4_3:51232117-51232136 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr4_3:51232115-51232134 Msa0645780:intron 15.0%
!!! TTCTTCTTTTTATATATACA+GGG + chr4_3:51232305-51232324 None:intergenic 15.0%
!!! TTTCTTCTTTTTATATATAC+AGG + chr4_3:51232306-51232325 None:intergenic 15.0%
!!! AATATATTTTACTATGGATA+TGG + chr4_3:51232540-51232559 None:intergenic 15.0%
!!! CTAAAGAATATATTTTACTA+TGG + chr4_3:51232546-51232565 None:intergenic 15.0%
!! CATAGTAAAATATATTCTTT+AGG - chr4_3:51232544-51232563 Msa0645780:intron 15.0%
!!! AAATATATTCTTTAGGAATT+AGG - chr4_3:51232551-51232570 Msa0645780:intron 15.0%
!! CACATATAATTATGTAATAA+AGG + chr4_3:51232661-51232680 None:intergenic 15.0%
!! ATAATTATATGTGAAATTCT+TGG - chr4_3:51232668-51232687 Msa0645780:intron 15.0%
!!! TCTTCAAATTTACTTTTTTT+AGG + chr4_3:51233003-51233022 None:intergenic 15.0%
!! TTATACAAAAATGCTTATGA+TGG + chr4_3:51226424-51226443 None:intergenic 20.0%
!!! TCTAATATGTTTTGAATAAG+AGG - chr4_3:51226565-51226584 Msa0645780:intron 20.0%
!!! CTAATATGTTTTGAATAAGA+GGG - chr4_3:51226566-51226585 Msa0645780:intron 20.0%
!!! TAATATGTTTTGAATAAGAG+GGG - chr4_3:51226567-51226586 Msa0645780:intron 20.0%
!!! CTATTTTGAAGTTAGTTTTA+GGG + chr4_3:51226999-51227018 None:intergenic 20.0%
!! AAGAAGAAACAATAATAAGA+TGG + chr4_3:51227042-51227061 None:intergenic 20.0%
!! TATGTTATAAATGTGTGATA+AGG + chr4_3:51227886-51227905 None:intergenic 20.0%
!! TCACACATTTATAACATAAT+TGG - chr4_3:51227888-51227907 Msa0645780:intron 20.0%
!!! GAAGATTTTCAATAATCAAT+GGG + chr4_3:51228475-51228494 None:intergenic 20.0%
!! TATGAATTTCTAAATTTGGT+AGG - chr4_3:51228640-51228659 Msa0645780:intron 20.0%
!! TTGAAAATATAATTATGACC+TGG + chr4_3:51228868-51228887 None:intergenic 20.0%
!! AATTACTAAAACAAACATAG+GGG + chr4_3:51228935-51228954 None:intergenic 20.0%
!!! TATATCTAAGTTTTGCTTTT+AGG - chr4_3:51229203-51229222 Msa0645780:intron 20.0%
!!! CTTTTAGATTAATCATTTCT+AGG - chr4_3:51229293-51229312 Msa0645780:intron 20.0%
!! AAGTAGAATTAAAACCTAAA+AGG + chr4_3:51229490-51229509 None:intergenic 20.0%
!! TGAAATATTATTGTATGTGT+AGG + chr4_3:51229646-51229665 None:intergenic 20.0%
!! AAGCAAATGGATAAAAAATT+TGG + chr4_3:51229910-51229929 None:intergenic 20.0%
!! TACTATTTATGTATAGAAAG+TGG + chr4_3:51230104-51230123 None:intergenic 20.0%
!!! GATCTTGAGATTTTTTTATT+AGG - chr4_3:51230497-51230516 Msa0645780:intron 20.0%
!! TATCTTAATAGTTATGACAA+TGG - chr4_3:51230747-51230766 Msa0645780:intron 20.0%
!! GGAAATATAAAATTAGGTTT+GGG + chr4_3:51231201-51231220 None:intergenic 20.0%
!! AGGAAATATAAAATTAGGTT+TGG + chr4_3:51231202-51231221 None:intergenic 20.0%
!!! TGTTGATTTTCATGAAAAAA+AGG - chr4_3:51231672-51231691 Msa0645780:intron 20.0%
!!! GTTGATTTTCATGAAAAAAA+GGG - chr4_3:51231673-51231692 Msa0645780:intron 20.0%
!! AACAAAAAACTAGAATACTT+TGG - chr4_3:51231708-51231727 Msa0645780:intron 20.0%
!! ATGTAAATCATGAAATTCAA+TGG + chr4_3:51231791-51231810 None:intergenic 20.0%
!! AAACAAAATTGTAAAACTGA+TGG + chr4_3:51231833-51231852 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr4_3:51232114-51232133 None:intergenic 20.0%
!! TTGAACAGAAAAAAAAATCT+TGG - chr4_3:51232149-51232168 Msa0645780:intron 20.0%
!!! TCTTCTTTTTATATATACAG+GGG + chr4_3:51232304-51232323 None:intergenic 20.0%
!!! TTTATGTAAATCTTTTCCTT+TGG - chr4_3:51232441-51232460 Msa0645780:intron 20.0%
!!! TTATGTAAATCTTTTCCTTT+GGG - chr4_3:51232442-51232461 Msa0645780:intron 20.0%
!! ATAACTAATTAATTTCCCAA+AGG + chr4_3:51232460-51232479 None:intergenic 20.0%
!! TTTGGGAAATTAATTAGTTA+TGG - chr4_3:51232459-51232478 Msa0645780:intron 20.0%
!! AATTTGAAGAAAGAATTATC+TGG - chr4_3:51232802-51232821 Msa0645780:intron 20.0%
!!! TGATAATATTATTTGACTTG+TGG - chr4_3:51233293-51233312 Msa0645780:CDS 20.0%
!!! CCATTTTTTTTATCCAAATT+TGG + chr4_3:51233319-51233338 None:intergenic 20.0%
!! CCAAATTTGGATAAAAAAAA+TGG - chr4_3:51233316-51233335 Msa0645780:CDS 20.0%
!! TTTTCAGTTTTTGCGATTTT+AGG - chr4_3:51226086-51226105 Msa0645780:intron 25.0%
!!! GTTAGTTACTTTCTCTTTTT+TGG - chr4_3:51226255-51226274 Msa0645780:intron 25.0%
! GGTTTGAATATTTAACTATG+AGG - chr4_3:51226324-51226343 Msa0645780:CDS 25.0%
! AATATTTAACTATGAGGCAT+AGG - chr4_3:51226330-51226349 Msa0645780:CDS 25.0%
! AGTAAGTTATTATTCCAAAC+AGG + chr4_3:51226377-51226396 None:intergenic 25.0%
! AATAACTTACTTGCAGTTTA+TGG - chr4_3:51226386-51226405 Msa0645780:intron 25.0%
!!! AGCGTAGATTTTAATATAAG+AGG - chr4_3:51226492-51226511 Msa0645780:intron 25.0%
!!! GCGTAGATTTTAATATAAGA+GGG - chr4_3:51226493-51226512 Msa0645780:intron 25.0%
!!! CGTAGATTTTAATATAAGAG+GGG - chr4_3:51226494-51226513 Msa0645780:intron 25.0%
! AATGTATATTCTAACGTAAG+AGG - chr4_3:51226595-51226614 Msa0645780:intron 25.0%
! ATGTATATTCTAACGTAAGA+GGG - chr4_3:51226596-51226615 Msa0645780:intron 25.0%
!! TATACTGTCATAGCATTTTA+GGG + chr4_3:51226722-51226741 None:intergenic 25.0%
! TGAGTTATATGAAACTGTTT+GGG + chr4_3:51226956-51226975 None:intergenic 25.0%
! TTGAGTTATATGAAACTGTT+TGG + chr4_3:51226957-51226976 None:intergenic 25.0%
!!! GCTATTTTGAAGTTAGTTTT+AGG + chr4_3:51227000-51227019 None:intergenic 25.0%
!!! TTCTGCTTTAGATTTTAAAG+AGG - chr4_3:51227354-51227373 Msa0645780:intron 25.0%
! GGTTATTTAAATTAGGAACA+CGG + chr4_3:51227574-51227593 None:intergenic 25.0%
! GTTGTGAGGTTATTTAAATT+AGG + chr4_3:51227581-51227600 None:intergenic 25.0%
! CTTTCACAAACCTAAATATT+TGG + chr4_3:51227603-51227622 None:intergenic 25.0%
!! CAAATATTTAGGTTTGTGAA+AGG - chr4_3:51227601-51227620 Msa0645780:intron 25.0%
!!! AACTTTTCTAAAGTACTTTG+AGG - chr4_3:51227725-51227744 Msa0645780:intron 25.0%
!! ATATACTTTTAACATGTTGC+AGG - chr4_3:51227921-51227940 Msa0645780:intron 25.0%
!! TGATTGCAAAAATGTGTTTT+TGG + chr4_3:51228415-51228434 None:intergenic 25.0%
!! GGAAGATTTTCAATAATCAA+TGG + chr4_3:51228476-51228495 None:intergenic 25.0%
! TGTATTATTAAAACCTTACC+AGG - chr4_3:51228847-51228866 Msa0645780:intron 25.0%
! AATATAATTATGACCTGGTA+AGG + chr4_3:51228863-51228882 None:intergenic 25.0%
! TTTCAAATTATTAGCTGTGT+CGG - chr4_3:51229097-51229116 Msa0645780:intron 25.0%
!! TTAGATTAATCATTTCTAGG+AGG - chr4_3:51229296-51229315 Msa0645780:intron 25.0%
! AAAAAGAAGTAAAATAGCCT+AGG + chr4_3:51229399-51229418 None:intergenic 25.0%
! AATTAAAACCTAAAAGGCAA+AGG + chr4_3:51229484-51229503 None:intergenic 25.0%
! AACTTGCATAAATAAATGTG+AGG + chr4_3:51229615-51229634 None:intergenic 25.0%
! AATATTATTGTATGTGTAGG+TGG + chr4_3:51229643-51229662 None:intergenic 25.0%
!!! CCAATTCAATTGTTTCTAAA+CGG + chr4_3:51229704-51229723 None:intergenic 25.0%
! GAATACAGAATGGAATAAAA+TGG + chr4_3:51229933-51229952 None:intergenic 25.0%
! TTATTCCATTCTGTATTCTA+TGG - chr4_3:51229935-51229954 Msa0645780:intron 25.0%
! TTCTATTAGTAATGTCTTGT+TGG - chr4_3:51229958-51229977 Msa0645780:intron 25.0%
!!! CATTTTTTCAAAAGCTGAAA+GGG + chr4_3:51230049-51230068 None:intergenic 25.0%
! TTTGAAAAAATGGAAGAGAA+AGG - chr4_3:51230057-51230076 Msa0645780:intron 25.0%
! AGTACTTATAAGTTATATCC+TGG - chr4_3:51230120-51230139 Msa0645780:intron 25.0%
!! AAATGAAAGAGTACATTTGT+GGG + chr4_3:51230177-51230196 None:intergenic 25.0%
!! TAAATGAAAGAGTACATTTG+TGG + chr4_3:51230178-51230197 None:intergenic 25.0%
!! TAGAACTTCAAATATTTCTG+TGG + chr4_3:51230205-51230224 None:intergenic 25.0%
! AAATCTAGAGATTAATGAGT+TGG - chr4_3:51230369-51230388 Msa0645780:intron 25.0%
!! TGGTTTAAGATAGAACATTA+TGG - chr4_3:51230401-51230420 Msa0645780:intron 25.0%
! TTTATGATATGACAATCATC+AGG + chr4_3:51230528-51230547 None:intergenic 25.0%
! TGAAATTGAAATTGCAGAAA+TGG - chr4_3:51230883-51230902 Msa0645780:intron 25.0%
! ATCGTAATATTTACATAGCT+AGG - chr4_3:51231257-51231276 Msa0645780:intron 25.0%
! AATTGTTGAATAGAAAACAC+AGG + chr4_3:51231355-51231374 None:intergenic 25.0%
! AATAAACGGTTGTGATTAAA+AGG - chr4_3:51231479-51231498 Msa0645780:CDS 25.0%
! AAAAGCTCCATTAAAGAAAA+CGG - chr4_3:51231751-51231770 Msa0645780:intron 25.0%
! ATGAAATTCAATGGACAAAT+CGG + chr4_3:51231782-51231801 None:intergenic 25.0%
!!! TTTGTTTCAAGTTGTGTAAA+TGG - chr4_3:51231846-51231865 Msa0645780:intron 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr4_3:51232078-51232097 Msa0645780:intron 25.0%
! AACACCAATATTTGGAAATT+AGG + chr4_3:51232514-51232533 None:intergenic 25.0%
!! TATGGATTAACACCAATATT+TGG + chr4_3:51232522-51232541 None:intergenic 25.0%
!!! TTGCAGTTTTATGTGATAAT+TGG - chr4_3:51232714-51232733 Msa0645780:intron 25.0%
! ATTCTTTCTTCAAATTTGCA+AGG + chr4_3:51232798-51232817 None:intergenic 25.0%
!! TAGGCATAATACAATGTTTT+TGG + chr4_3:51232984-51233003 None:intergenic 25.0%
!! AAAAAGTATATGTAGAACGT+TGG + chr4_3:51233046-51233065 None:intergenic 25.0%
!!! ATACTTTTTTGTTTCATCGT+TGG - chr4_3:51233057-51233076 Msa0645780:intron 25.0%
!!! ATCAAAGGAGTTTTAAAGTA+TGG - chr4_3:51233193-51233212 Msa0645780:intron 25.0%
! GGATAATATTATCATATCGA+AGG + chr4_3:51233392-51233411 None:intergenic 25.0%
! ATATTATCCTGACATGTATA+CGG - chr4_3:51233403-51233422 Msa0645780:intron 25.0%
! TTATATTCTCCACATAAATC+TGG + chr4_3:51233689-51233708 None:intergenic 25.0%
! AAATTTGAAAAAACATGCAC+AGG + chr4_3:51233745-51233764 None:intergenic 25.0%
! TATAGAAAAAATTTCCGTTG+CGG - chr4_3:51233871-51233890 Msa0645780:five_prime_UTR 25.0%
!! AGATTTTAATATAAGAGGGG+AGG - chr4_3:51226497-51226516 Msa0645780:intron 30.0%
!! GATTTTAATATAAGAGGGGA+GGG - chr4_3:51226498-51226517 Msa0645780:intron 30.0%
!! ATTTTAATATAAGAGGGGAG+GGG - chr4_3:51226499-51226518 Msa0645780:intron 30.0%
! TATAATTCAAGCTTTTCCCA+AGG - chr4_3:51226524-51226543 Msa0645780:intron 30.0%
! ATAATTCAAGCTTTTCCCAA+GGG - chr4_3:51226525-51226544 Msa0645780:intron 30.0%
TGTATATTCTAACGTAAGAG+GGG - chr4_3:51226597-51226616 Msa0645780:intron 30.0%
TGTAATTCATGCATCTTCAA+GGG - chr4_3:51226627-51226646 Msa0645780:intron 30.0%
! ATACTGTCATAGCATTTTAG+GGG + chr4_3:51226721-51226740 None:intergenic 30.0%
! CTATACTGTCATAGCATTTT+AGG + chr4_3:51226723-51226742 None:intergenic 30.0%
!!! CTGATTTTTAGTCTTTGCAA+TGG + chr4_3:51226756-51226775 None:intergenic 30.0%
TCAAATAAGCCAATCCAAAA+AGG - chr4_3:51226973-51226992 Msa0645780:intron 30.0%
ACGGATGGAAAATAAATACA+AGG - chr4_3:51227092-51227111 Msa0645780:intron 30.0%
AGATGTGTAAAACACAAAAG+TGG + chr4_3:51227200-51227219 None:intergenic 30.0%
AACCTCACAACCAAATATTT+AGG - chr4_3:51227590-51227609 Msa0645780:intron 30.0%
AACCTAAATATTTGGTTGTG+AGG + chr4_3:51227595-51227614 None:intergenic 30.0%
!! GTTCAGACATTTTAGGTAAA+TGG - chr4_3:51227685-51227704 Msa0645780:intron 30.0%
TAGAAAAGTTAACCATTGTG+AGG + chr4_3:51227715-51227734 None:intergenic 30.0%
!! GCGTTGTTGATTGAATATTT+TGG - chr4_3:51227799-51227818 Msa0645780:intron 30.0%
! TTTTGTGAAACATGGCATTT+AGG + chr4_3:51228063-51228082 None:intergenic 30.0%
!! GAACATTGTTTTGTGAAACA+TGG + chr4_3:51228071-51228090 None:intergenic 30.0%
!!! AAATGTGTTTTTGGTGATCA+GGG + chr4_3:51228406-51228425 None:intergenic 30.0%
!!! AAAATGTGTTTTTGGTGATC+AGG + chr4_3:51228407-51228426 None:intergenic 30.0%
! ACACATTTTTGCAATCAGAA+AGG - chr4_3:51228418-51228437 Msa0645780:intron 30.0%
CAATCAGAAAGGCAAAAAAA+CGG - chr4_3:51228429-51228448 Msa0645780:intron 30.0%
ATTTCCCTAATTATTGACAG+TGG + chr4_3:51228507-51228526 None:intergenic 30.0%
AAACAATGGTTCATTATCAG+GGG + chr4_3:51228965-51228984 None:intergenic 30.0%
CAAACAATGGTTCATTATCA+GGG + chr4_3:51228966-51228985 None:intergenic 30.0%
TCAAACAATGGTTCATTATC+AGG + chr4_3:51228967-51228986 None:intergenic 30.0%
CATAGATCTGCATTTATGTA+TGG - chr4_3:51229163-51229182 Msa0645780:intron 30.0%
!!! CTAAGTTTTGCTTTTAGGAT+TGG - chr4_3:51229208-51229227 Msa0645780:intron 30.0%
!! AAAGGAAAATAGGTTTTGGT+TGG + chr4_3:51229466-51229485 None:intergenic 30.0%
CAATAATATTTCAGTTCACC+AGG - chr4_3:51229653-51229672 Msa0645780:intron 30.0%
CCGTTTAGAAACAATTGAAT+TGG - chr4_3:51229701-51229720 Msa0645780:intron 30.0%
ACAACTTACATTCAGAATTG+AGG + chr4_3:51229796-51229815 None:intergenic 30.0%
! GTTGTTCAATTTGTAGCTTT+TGG - chr4_3:51229811-51229830 Msa0645780:intron 30.0%
TGGAATAAAATGGAAGCAAA+TGG + chr4_3:51229923-51229942 None:intergenic 30.0%
TAGAACCATAGAATACAGAA+TGG + chr4_3:51229943-51229962 None:intergenic 30.0%
!!! CCATTTTTTCAAAAGCTGAA+AGG + chr4_3:51230050-51230069 None:intergenic 30.0%
!! CCTTTCAGCTTTTGAAAAAA+TGG - chr4_3:51230047-51230066 Msa0645780:intron 30.0%
! TTATGTATAGAAAGTGGACT+CGG + chr4_3:51230098-51230117 None:intergenic 30.0%
AAAAAAAAGAGAAGCAGGAA+AGG + chr4_3:51230233-51230252 None:intergenic 30.0%
! AAGCTTGTTTATACACTGAT+AGG + chr4_3:51230269-51230288 None:intergenic 30.0%
! TAATGAGTTGGATCGAAATA+TGG - chr4_3:51230381-51230400 Msa0645780:intron 30.0%
!!! CGTAAAATTTTTAGCATGCT+GGG + chr4_3:51230594-51230613 None:intergenic 30.0%
! CCAGCATGCTAAAAATTTTA+CGG - chr4_3:51230592-51230611 Msa0645780:intron 30.0%
! TGAAAGCACATAAAAAGCTA+AGG + chr4_3:51230685-51230704 None:intergenic 30.0%
TAGATAGACACAAACTCATT+TGG + chr4_3:51230845-51230864 None:intergenic 30.0%
ATGGAAAAGAAAGAAAACCT+AGG - chr4_3:51230902-51230921 Msa0645780:intron 30.0%
TGGAAAAGAAAGAAAACCTA+GGG - chr4_3:51230903-51230922 Msa0645780:intron 30.0%
! AAAATAAACCAAGGGTGTAT+TGG + chr4_3:51231145-51231164 None:intergenic 30.0%
TTATGAGAAATGGGATCAAA+GGG - chr4_3:51231175-51231194 Msa0645780:intron 30.0%
ATAGAAAACACAGGTTAAAG+AGG + chr4_3:51231346-51231365 None:intergenic 30.0%
GAAGAACAAATAACATCCAT+TGG - chr4_3:51231452-51231471 Msa0645780:intron 30.0%
CATCCATTGGATCAAATAAA+CGG - chr4_3:51231465-51231484 Msa0645780:CDS 30.0%
CAACTGTTTATTAGATCCAA+TGG - chr4_3:51232224-51232243 Msa0645780:CDS 30.0%
GAAGAACAAATAACATCCAT+TGG + chr4_3:51231452-51231471 None:intergenic 30.0%
ATTTCCTAACTAGTTCCTAA+GGG + chr4_3:51232380-51232399 None:intergenic 30.0%
TATTTCCTAACTAGTTCCTA+AGG + chr4_3:51232381-51232400 None:intergenic 30.0%
CAAGCCTAATTTCCAAATAT+TGG - chr4_3:51232507-51232526 Msa0645780:intron 30.0%
! TAAAAGCATGACAAAGTTGA+TGG + chr4_3:51232603-51232622 None:intergenic 30.0%
! TGTCATGCTTTTATTGAGTT+TGG - chr4_3:51232610-51232629 Msa0645780:intron 30.0%
AATAGAGCGTATGTATGAAT+AGG - chr4_3:51232852-51232871 Msa0645780:intron 30.0%
ATAGAGCGTATGTATGAATA+GGG - chr4_3:51232853-51232872 Msa0645780:intron 30.0%
GAAACAAGCAATATTTGGAT+TGG + chr4_3:51233723-51233742 None:intergenic 30.0%
GAAGAGTTGTTTGAAGATGA+TGG + chr4_3:51225701-51225720 None:intergenic 35.0%
TTCTCTTCCGATCACAAAAA+TGG - chr4_3:51225732-51225751 Msa0645780:three_prime_UTR 35.0%
ATTGAGAAAATGAGAGAACC+TGG + chr4_3:51225862-51225881 None:intergenic 35.0%
CTTCATTCCTCTGAATTTCA+CGG + chr4_3:51225961-51225980 None:intergenic 35.0%
TGCTATTGTAAGTTCGTTTG+AGG - chr4_3:51226155-51226174 Msa0645780:intron 35.0%
!! AGCTTGCTCCAAAATTTTCT+CGG + chr4_3:51226184-51226203 None:intergenic 35.0%
ATTTAACTATGAGGCATAGG+TGG - chr4_3:51226333-51226352 Msa0645780:CDS 35.0%
CTGAAAATTAAGGTCCTGTT+TGG - chr4_3:51226360-51226379 Msa0645780:CDS 35.0%
!! TATGTTTTGAATAAGAGGGG+AGG - chr4_3:51226570-51226589 Msa0645780:intron 35.0%
!! ATGTTTTGAATAAGAGGGGA+GGG - chr4_3:51226571-51226590 Msa0645780:intron 35.0%
GTGTAATTCATGCATCTTCA+AGG - chr4_3:51226626-51226645 Msa0645780:intron 35.0%
GTAATTCATGCATCTTCAAG+GGG - chr4_3:51226628-51226647 Msa0645780:intron 35.0%
! CTATTTGGGACTAACAACAT+AGG + chr4_3:51226682-51226701 None:intergenic 35.0%
TATGACAGTATAGCAGATAG+CGG - chr4_3:51226730-51226749 Msa0645780:intron 35.0%
TATAGCACGGAATAGCATAA+CGG + chr4_3:51226819-51226838 None:intergenic 35.0%
! TCAATAGTGTTGCTATAGCA+CGG + chr4_3:51226832-51226851 None:intergenic 35.0%
AAACTGTTTGGGAGAACTTA+TGG + chr4_3:51226945-51226964 None:intergenic 35.0%
!!! AGTTAGTTTTAGGGCCTTTT+TGG + chr4_3:51226990-51227009 None:intergenic 35.0%
TTTCTTCTTTCCCTTTCTTG+AGG - chr4_3:51227053-51227072 Msa0645780:intron 35.0%
TTTAATTCGCTTGCAGTGTT+TGG - chr4_3:51227164-51227183 Msa0645780:intron 35.0%
! GTGTTTTACACATCTGATGT+AGG - chr4_3:51227205-51227224 Msa0645780:intron 35.0%
TTGCGATATGATCAGTAGTT+CGG - chr4_3:51227440-51227459 Msa0645780:intron 35.0%
TGATATTGCTAAGCTATGTG+AGG + chr4_3:51227477-51227496 None:intergenic 35.0%
TCAAACCACATAATAACCCA+AGG + chr4_3:51227652-51227671 None:intergenic 35.0%
! GAAGTCAGTTCAGACATTTT+AGG - chr4_3:51227678-51227697 Msa0645780:intron 35.0%
GTCAGATACTGCTGTAAATA+CGG - chr4_3:51227765-51227784 Msa0645780:intron 35.0%
! GCTGTAGTTTGACATTTTGT+TGG - chr4_3:51227827-51227846 Msa0645780:intron 35.0%
! ACAGTCTTGTCTCAAATACA+CGG - chr4_3:51227995-51228014 Msa0645780:intron 35.0%
TGAAACATGGCATTTAGGTA+AGG + chr4_3:51228058-51228077 None:intergenic 35.0%
AAACAATGTTCTTGAAACCC+TGG - chr4_3:51228080-51228099 Msa0645780:intron 35.0%
AACAATGTTCTTGAAACCCT+GGG - chr4_3:51228081-51228100 Msa0645780:intron 35.0%
TTTATGGAGCCACATAATCA+AGG - chr4_3:51228126-51228145 Msa0645780:intron 35.0%
GTTTGTCTACCTTGATTATG+TGG + chr4_3:51228138-51228157 None:intergenic 35.0%
!!! GTTTTTGAAACCCAGAAAAC+CGG - chr4_3:51228307-51228326 Msa0645780:intron 35.0%
!!! TTTTTGAAACCCAGAAAACC+GGG - chr4_3:51228308-51228327 Msa0645780:intron 35.0%
! TGTTTCGTTTTCCAGAAATC+CGG - chr4_3:51228359-51228378 Msa0645780:intron 35.0%
! TTTCCAGAAATCCGGATTTT+CGG - chr4_3:51228367-51228386 Msa0645780:intron 35.0%
TTATTGACAGTGGCTGTATT+GGG + chr4_3:51228497-51228516 None:intergenic 35.0%
ATTATTGACAGTGGCTGTAT+TGG + chr4_3:51228498-51228517 None:intergenic 35.0%
TACAGCCACTGTCAATAATT+AGG - chr4_3:51228499-51228518 Msa0645780:intron 35.0%
ACAGCCACTGTCAATAATTA+GGG - chr4_3:51228500-51228519 Msa0645780:intron 35.0%
!! AGTGCTATTTATGGGTGTAT+TGG + chr4_3:51228533-51228552 None:intergenic 35.0%
GAGTTGAGTGCTATGAATAT+GGG + chr4_3:51228561-51228580 None:intergenic 35.0%
AACATAAGTAACGTGTGAGA+GGG + chr4_3:51228583-51228602 None:intergenic 35.0%
TTTGTCTACCTTGCACATAA+TGG - chr4_3:51228738-51228757 Msa0645780:intron 35.0%
CATAGATGCAGATCAAACAA+TGG + chr4_3:51228979-51228998 None:intergenic 35.0%
AAATGCAGATCTATGAAGCA+CGG + chr4_3:51229158-51229177 None:intergenic 35.0%
TGTAGAAATTGCTACACGTT+TGG - chr4_3:51229322-51229341 Msa0645780:intron 35.0%
TTGGTACAACTGAAGTTTGA+AGG + chr4_3:51229440-51229459 None:intergenic 35.0%
!!! AATAGGTTTTGGTTGGTAGT+TGG + chr4_3:51229459-51229478 None:intergenic 35.0%
! AGGCAAAGGAAAATAGGTTT+TGG + chr4_3:51229470-51229489 None:intergenic 35.0%
CCTAAAAGGCAAAGGAAAAT+AGG + chr4_3:51229476-51229495 None:intergenic 35.0%
! CCTATTTTCCTTTGCCTTTT+AGG - chr4_3:51229473-51229492 Msa0645780:intron 35.0%
! TTCTAGGGATAATACATGGA+TGG + chr4_3:51229529-51229548 None:intergenic 35.0%
GCATTGAAAACCATGGTTTA+CGG + chr4_3:51229553-51229572 None:intergenic 35.0%
!! CATACAAGCATTGAAAACCA+TGG + chr4_3:51229560-51229579 None:intergenic 35.0%
!! GCTTTTGGAGAGTAAAATTC+AGG - chr4_3:51229826-51229845 Msa0645780:intron 35.0%
TTTGGAGAGTAAAATTCAGG+AGG - chr4_3:51229829-51229848 Msa0645780:intron 35.0%
TCAAACAATAAATGCAGACC+AGG + chr4_3:51230141-51230160 None:intergenic 35.0%
TGACATCTTGAAGCTTATAG+TGG - chr4_3:51230308-51230327 Msa0645780:intron 35.0%
GACATCTTGAAGCTTATAGT+GGG - chr4_3:51230309-51230328 Msa0645780:intron 35.0%
!!! CCGTAAAATTTTTAGCATGC+TGG + chr4_3:51230595-51230614 None:intergenic 35.0%
TTGACAAGTGATGATCTTGA+AGG - chr4_3:51230796-51230815 Msa0645780:intron 35.0%
TGACAAGTGATGATCTTGAA+GGG - chr4_3:51230797-51230816 Msa0645780:intron 35.0%
CAAGAGATAGAGTGAAAACA+AGG + chr4_3:51230997-51231016 None:intergenic 35.0%
CTTATGAGAAATGGGATCAA+AGG - chr4_3:51231174-51231193 Msa0645780:intron 35.0%
CAACCGTTTATTTGATCCAA+TGG + chr4_3:51231471-51231490 None:intergenic 35.0%
TATTGTAATCTCCAACGTCA+TGG - chr4_3:51231556-51231575 Msa0645780:intron 35.0%
ATTGTAATCTCCAACGTCAT+GGG - chr4_3:51231557-51231576 Msa0645780:intron 35.0%
AGTTTCTCATGAGAACAGAT+CGG - chr4_3:51231921-51231940 Msa0645780:intron 35.0%
AGTTTCTCATGAGAACAGAT+CGG - chr4_3:51231921-51231940 Msa0645780:intron 35.0%
GAATAAACAGCAAATGGATG+AGG + chr4_3:51232358-51232377 None:intergenic 35.0%
CTAAGGGAATAAACAGCAAA+TGG + chr4_3:51232364-51232383 None:intergenic 35.0%
!! CATTTGCTGTTTATTCCCTT+AGG - chr4_3:51232362-51232381 Msa0645780:CDS 35.0%
TATTCCCTTAGGAACTAGTT+AGG - chr4_3:51232373-51232392 Msa0645780:CDS 35.0%
AGAATTATCTGGTAGCTCAA+AGG - chr4_3:51232813-51232832 Msa0645780:intron 35.0%
TTATGGTTGCAAAACAGGAA+AGG + chr4_3:51232919-51232938 None:intergenic 35.0%
ACAACTTATGGTTGCAAAAC+AGG + chr4_3:51232924-51232943 None:intergenic 35.0%
AAGTATATGTAGAACGTTGG+TGG + chr4_3:51233043-51233062 None:intergenic 35.0%
TCAATATCAGCATCTCGTAA+TGG + chr4_3:51233146-51233165 None:intergenic 35.0%
TCAACTGAGACAAAGATCAA+AGG - chr4_3:51233178-51233197 Msa0645780:intron 35.0%
TATCAACATTGCACAGCTAA+AGG - chr4_3:51233263-51233282 Msa0645780:CDS 35.0%
!! ATTTGACTTGTGGCCAAATT+TGG - chr4_3:51233303-51233322 Msa0645780:CDS 35.0%
ACATGTTTACATCCAAAGTC+AGG + chr4_3:51233540-51233559 None:intergenic 35.0%
GGATGTAAACATGTTCAATG+AGG - chr4_3:51233546-51233565 Msa0645780:intron 35.0%
ACTTCATAGCCAGATTTATG+TGG - chr4_3:51233677-51233696 Msa0645780:CDS 35.0%
CACAGGAAACAAGCAATATT+TGG + chr4_3:51233728-51233747 None:intergenic 35.0%
TTCCATATCCATGCAGATTT+AGG + chr4_3:51233783-51233802 None:intergenic 35.0%
GGATATGGAAAAGCAGTATT+CGG - chr4_3:51233793-51233812 Msa0645780:five_prime_UTR 35.0%
TTTCTACTTTCTAACCGCAA+CGG + chr4_3:51233888-51233907 None:intergenic 35.0%
!!! TTTTCAATGGGCTAAGGGAA+GGG + chr4_3:51225575-51225594 None:intergenic 40.0%
!!! TTTTTCAATGGGCTAAGGGA+AGG + chr4_3:51225576-51225595 None:intergenic 40.0%
TTCCCTTAGCCCATTGAAAA+AGG - chr4_3:51225575-51225594 Msa0645780:three_prime_UTR 40.0%
!!! CTCCTTTTTCAATGGGCTAA+GGG + chr4_3:51225580-51225599 None:intergenic 40.0%
!!! TTGCGAGCTCCTTTTTCAAT+GGG + chr4_3:51225587-51225606 None:intergenic 40.0%
!!! TTTGCGAGCTCCTTTTTCAA+TGG + chr4_3:51225588-51225607 None:intergenic 40.0%
CGAGAGGAATATCTTTCACA+AGG - chr4_3:51225618-51225637 Msa0645780:three_prime_UTR 40.0%
AGATATTGCTTGCGATTTCG+AGG + chr4_3:51225668-51225687 None:intergenic 40.0%
!!! TTCGTCGCCATTTTTGTGAT+CGG + chr4_3:51225742-51225761 None:intergenic 40.0%
AGAAGAAGATTGAAGTGGTG+CGG + chr4_3:51225791-51225810 None:intergenic 40.0%
GAGGAAGAAGAAGATTGAAG+TGG + chr4_3:51225796-51225815 None:intergenic 40.0%
AAGATTTACGAGAGTCGTGA+AGG - chr4_3:51226037-51226056 Msa0645780:intron 40.0%
! TGAGGATCCCGAGAAAATTT+TGG - chr4_3:51226173-51226192 Msa0645780:intron 40.0%
! GCTTGCTCCAAAATTTTCTC+GGG + chr4_3:51226183-51226202 None:intergenic 40.0%
! AACTAACTTGTGCTGTAGCT+TGG + chr4_3:51226242-51226261 None:intergenic 40.0%
AGGTGGCATGCTGAAAATTA+AGG - chr4_3:51226350-51226369 Msa0645780:CDS 40.0%
ATATTCTAACGTAAGAGGGG+AGG - chr4_3:51226600-51226619 Msa0645780:intron 40.0%
!! TGTCATAGCATTTTAGGGGT+AGG + chr4_3:51226717-51226736 None:intergenic 40.0%
!!! GTTTTAGGGCCTTTTTGGAT+TGG + chr4_3:51226985-51227004 None:intergenic 40.0%
!! AGGTGTTGGCATCTCAAAAA+CGG - chr4_3:51227073-51227092 Msa0645780:intron 40.0%
! CACAACTTGCTCTTCAGAAA+GGG - chr4_3:51227238-51227257 Msa0645780:intron 40.0%
! ACAACTTGCTCTTCAGAAAG+GGG - chr4_3:51227239-51227258 Msa0645780:intron 40.0%
TCATATCGCAAACATGCGAA+AGG + chr4_3:51227431-51227450 None:intergenic 40.0%
TATTGCTAAGCTATGTGAGG+AGG + chr4_3:51227474-51227493 None:intergenic 40.0%
AGCATCGCTAAAACCTTGAT+TGG - chr4_3:51227539-51227558 Msa0645780:intron 40.0%
GTGAAAGGAAATGACCATTC+TGG - chr4_3:51227616-51227635 Msa0645780:intron 40.0%
AAGGACATGACAAACCAGAA+TGG + chr4_3:51227633-51227652 None:intergenic 40.0%
!! ATTCTGGTTTGTCATGTCCT+TGG - chr4_3:51227632-51227651 Msa0645780:intron 40.0%
!! TTCTGGTTTGTCATGTCCTT+GGG - chr4_3:51227633-51227652 Msa0645780:intron 40.0%
CATGTCCTTGGGTTATTATG+TGG - chr4_3:51227644-51227663 Msa0645780:intron 40.0%
AAGTTGAGCTTTCAAAGCAC+TGG + chr4_3:51227953-51227972 None:intergenic 40.0%
AGCTCAACTTGATCAGCAAA+AGG - chr4_3:51227963-51227982 Msa0645780:intron 40.0%
GCTCAACTTGATCAGCAAAA+GGG - chr4_3:51227964-51227983 Msa0645780:intron 40.0%
! CAGTCTTGTCTCAAATACAC+GGG - chr4_3:51227996-51228015 Msa0645780:intron 40.0%
CTCCATAAAAAGAGTCAGTC+CGG + chr4_3:51228115-51228134 None:intergenic 40.0%
! TTCCAGAAATCCGGATTTTC+GGG - chr4_3:51228368-51228387 Msa0645780:intron 40.0%
!! GGGAGTTGAGTGCTATTTAT+GGG + chr4_3:51228541-51228560 None:intergenic 40.0%
!! TGGGAGTTGAGTGCTATTTA+TGG + chr4_3:51228542-51228561 None:intergenic 40.0%
GGAGTTGAGTGCTATGAATA+TGG + chr4_3:51228562-51228581 None:intergenic 40.0%
CAACATAAGTAACGTGTGAG+AGG + chr4_3:51228584-51228603 None:intergenic 40.0%
TCGAGATCCTAAGTAAGATC+GGG + chr4_3:51228717-51228736 None:intergenic 40.0%
CTCGAGATCCTAAGTAAGAT+CGG + chr4_3:51228718-51228737 None:intergenic 40.0%
ATGGTGACTCAGTAGAATCA+AGG - chr4_3:51228757-51228776 Msa0645780:intron 40.0%
ACACGTTTGGTTGCAATTCT+AGG - chr4_3:51229335-51229354 Msa0645780:intron 40.0%
AATTCTAGGCATGATGCCTA+AGG - chr4_3:51229349-51229368 Msa0645780:intron 40.0%
ATGCCTAAGGAAGGAACTAT+AGG - chr4_3:51229362-51229381 Msa0645780:intron 40.0%
ACACCTATAGTTCCTTCCTT+AGG + chr4_3:51229368-51229387 None:intergenic 40.0%
TATAGGTGTATGTGAAGCCT+AGG - chr4_3:51229379-51229398 Msa0645780:intron 40.0%
! CGGATTCTAGGGATAATACA+TGG + chr4_3:51229533-51229552 None:intergenic 40.0%
ACCATGGTTTACGGATTCTA+GGG + chr4_3:51229544-51229563 None:intergenic 40.0%
AACCATGGTTTACGGATTCT+AGG + chr4_3:51229545-51229564 None:intergenic 40.0%
! ATTTCAGTTCACCAGGCTTT+TGG - chr4_3:51229660-51229679 Msa0645780:intron 40.0%
! TTTCAGTTCACCAGGCTTTT+GGG - chr4_3:51229661-51229680 Msa0645780:intron 40.0%
AAACTTTGCAGATTGAGCTC+TGG + chr4_3:51229882-51229901 None:intergenic 40.0%
! TTGTTGGTTGACGTTCCTTT+AGG - chr4_3:51229974-51229993 Msa0645780:intron 40.0%
!! TTCCTTTAGGACTTCAACCA+AGG - chr4_3:51229987-51230006 Msa0645780:intron 40.0%
CTGGGAAATGTCAATACAAG+TGG - chr4_3:51230021-51230040 Msa0645780:intron 40.0%
TGCGCAAAAAAAAGAGAAGC+AGG + chr4_3:51230238-51230257 None:intergenic 40.0%
AAGTGATGATCTTGAAGGGA+AGG - chr4_3:51230801-51230820 Msa0645780:intron 40.0%
AGAAAACCTAGGGACATACT+TGG - chr4_3:51230913-51230932 Msa0645780:intron 40.0%
GAGATAGAGTGAAAACAAGG+CGG + chr4_3:51230994-51231013 None:intergenic 40.0%
ACGAAAATCCAATACACCCT+TGG - chr4_3:51231134-51231153 Msa0645780:intron 40.0%
! AGGTTTACTATGTTCTGAGC+AGG - chr4_3:51231277-51231296 Msa0645780:intron 40.0%
ACCTGCAAATGAGATGTCAA+AGG - chr4_3:51231313-51231332 Msa0645780:intron 40.0%
!! GGAGAAGCCGTTTTCTTTAA+TGG + chr4_3:51231761-51231780 None:intergenic 40.0%
AGTTTGAAGACCGAGATGAA+CGG - chr4_3:51231895-51231914 Msa0645780:intron 40.0%
AGAAACTAGACCGTTCATCT+CGG + chr4_3:51231908-51231927 None:intergenic 40.0%
! GCTTGTTCTTGCAGTTTTTG+TGG + chr4_3:51232492-51232511 None:intergenic 40.0%
!! CATGACAAAGTTGATGGATG+AGG + chr4_3:51232597-51232616 None:intergenic 40.0%
GCAACCATAAGTTGTCTAAC+CGG - chr4_3:51232929-51232948 Msa0645780:intron 40.0%
! TTCACCGGTTAGACAACTTA+TGG + chr4_3:51232936-51232955 None:intergenic 40.0%
TTGTCTAACCGGTGAAAGAA+GGG - chr4_3:51232940-51232959 Msa0645780:intron 40.0%
TATTCACTCCCTTCTTTCAC+CGG + chr4_3:51232951-51232970 None:intergenic 40.0%
ACTGTTTGCTTCAAGCAGAA+AGG - chr4_3:51233080-51233099 Msa0645780:intron 40.0%
ACGAGATGCTGATATTGAGA+TGG - chr4_3:51233148-51233167 Msa0645780:intron 40.0%
ATCCTGACATGTATACGGTT+AGG - chr4_3:51233408-51233427 Msa0645780:intron 40.0%
ATCCTAACCGTATACATGTC+AGG + chr4_3:51233413-51233432 None:intergenic 40.0%
! TTTTTGCTTCCTCCTGACTT+TGG - chr4_3:51233525-51233544 Msa0645780:intron 40.0%
TGTTTACATCCAAAGTCAGG+AGG + chr4_3:51233537-51233556 None:intergenic 40.0%
AACATGTTCAATGAGGAGCA+AGG - chr4_3:51233553-51233572 Msa0645780:intron 40.0%
TGAAGTCTGCGTAGTTATGT+CGG + chr4_3:51233663-51233682 None:intergenic 40.0%
! TCCATGCAGATTTAGGACTT+CGG + chr4_3:51233776-51233795 None:intergenic 40.0%
GTCCTAAATCTGCATGGATA+TGG - chr4_3:51233778-51233797 Msa0645780:five_prime_UTR 40.0%
!! TTTCAATGGGCTAAGGGAAG+GGG + chr4_3:51225574-51225593 None:intergenic 45.0%
!!! GCTCCTTTTTCAATGGGCTA+AGG + chr4_3:51225581-51225600 None:intergenic 45.0%
GAAAATGAGAGAACCTGGTC+TGG + chr4_3:51225857-51225876 None:intergenic 45.0%
GCAAACACCGTGAAATTCAG+AGG - chr4_3:51225951-51225970 Msa0645780:intron 45.0%
AGGAATGAAGATTGCGAAGC+CGG - chr4_3:51225971-51225990 Msa0645780:intron 45.0%
! ATTCAAGCTTTTCCCAAGGG+AGG - chr4_3:51226528-51226547 Msa0645780:intron 45.0%
! TTCAAGCTTTTCCCAAGGGA+GGG - chr4_3:51226529-51226548 Msa0645780:intron 45.0%
ATATTTCACTCCCCTCCCTT+GGG + chr4_3:51226543-51226562 None:intergenic 45.0%
AATATTTCACTCCCCTCCCT+TGG + chr4_3:51226544-51226563 None:intergenic 45.0%
ATTCATGCATCTTCAAGGGG+AGG - chr4_3:51226631-51226650 Msa0645780:intron 45.0%
TTCATGCATCTTCAAGGGGA+GGG - chr4_3:51226632-51226651 Msa0645780:intron 45.0%
! GGTGCTACACGAAGCTATTT+GGG + chr4_3:51226696-51226715 None:intergenic 45.0%
! AGGTGCTACACGAAGCTATT+TGG + chr4_3:51226697-51226716 None:intergenic 45.0%
CTTTCCCTTTCTTGAGGTGT+TGG - chr4_3:51227059-51227078 Msa0645780:intron 45.0%
GATGCCAACACCTCAAGAAA+GGG + chr4_3:51227066-51227085 None:intergenic 45.0%
AGATGCCAACACCTCAAGAA+AGG + chr4_3:51227067-51227086 None:intergenic 45.0%
GTTGGCATCTCAAAAACGGA+TGG - chr4_3:51227077-51227096 Msa0645780:intron 45.0%
! CAACACAAGCTTCTGAAGAG+TGG - chr4_3:51227118-51227137 Msa0645780:intron 45.0%
! GCACAACTTGCTCTTCAGAA+AGG - chr4_3:51227237-51227256 Msa0645780:intron 45.0%
! TTGCTCGTGAAGCACTTAAG+CGG - chr4_3:51227271-51227290 Msa0645780:intron 45.0%
CGCAAACATGCGAAAGGAAA+TGG + chr4_3:51227425-51227444 None:intergenic 45.0%
GTAAATGGCAGACCTCACAA+TGG - chr4_3:51227700-51227719 Msa0645780:intron 45.0%
!! AGCCGGACTGACTCTTTTTA+TGG - chr4_3:51228110-51228129 Msa0645780:intron 45.0%
! AACCGATTCCAACGACTTTC+CGG + chr4_3:51228217-51228236 None:intergenic 45.0%
! AAGTCGTTGGAATCGGTTCT+TGG - chr4_3:51228219-51228238 Msa0645780:intron 45.0%
GTTGAAAAACGTGAACGCGT+TGG - chr4_3:51228262-51228281 Msa0645780:intron 45.0%
TGGAAAACGAAACACCAAGC+AGG + chr4_3:51228353-51228372 None:intergenic 45.0%
!!! AGAAATCCGGATTTTCGGGT+CGG - chr4_3:51228372-51228391 Msa0645780:intron 45.0%
AGGACCATGAGATCGTGAAT+CGG + chr4_3:51228693-51228712 None:intergenic 45.0%
GATCCTAAGTAAGATCGGGT+AGG + chr4_3:51228713-51228732 None:intergenic 45.0%
CTGAGTCACCATTATGTGCA+AGG + chr4_3:51228749-51228768 None:intergenic 45.0%
TATGAAGCACAGACACTCCT+CGG - chr4_3:51228995-51229014 Msa0645780:intron 45.0%
AGATCTATGAAGCACGGACA+CGG + chr4_3:51229152-51229171 None:intergenic 45.0%
TCCCTAGAATCCGTAAACCA+TGG - chr4_3:51229540-51229559 Msa0645780:intron 45.0%
TACTTCTTCTCCCAAAAGCC+TGG + chr4_3:51229674-51229693 None:intergenic 45.0%
AGAGTAAAATTCAGGAGGCG+AGG - chr4_3:51229834-51229853 Msa0645780:intron 45.0%
CACCTTGGTTGAAGTCCTAA+AGG + chr4_3:51229992-51230011 None:intergenic 45.0%
ACTAAATGGGGTCTGCTACA+TGG + chr4_3:51230438-51230457 None:intergenic 45.0%
ATGTAGCAGACCCCATTTAG+TGG - chr4_3:51230437-51230456 Msa0645780:intron 45.0%
TGTAGCAGACCCCATTTAGT+GGG - chr4_3:51230438-51230457 Msa0645780:intron 45.0%
ACCAAGCCTTCCCACTAAAT+GGG + chr4_3:51230451-51230470 None:intergenic 45.0%
AACCAAGCCTTCCCACTAAA+TGG + chr4_3:51230452-51230471 None:intergenic 45.0%
! GAAGGCTTGGTTGTTGTTGT+TGG - chr4_3:51230460-51230479 Msa0645780:intron 45.0%
TGCAAACCAAGTATGTCCCT+AGG + chr4_3:51230922-51230941 None:intergenic 45.0%
GCCTTTGACATCTCATTTGC+AGG + chr4_3:51231317-51231336 None:intergenic 45.0%
! GACGACACTGTCAGATCTTT+TGG + chr4_3:51231875-51231894 None:intergenic 45.0%
GTTGTCTAACCGGTGAAAGA+AGG - chr4_3:51232939-51232958 Msa0645780:intron 45.0%
! CCATGCAGATTTAGGACTTC+GGG + chr4_3:51233775-51233794 None:intergenic 45.0%
!! TAGTTTATTAAAAAAAAATT+GGG - chr4_3:51231649-51231668 Msa0645780:intron 5.0%
!! TTCAATGGGCTAAGGGAAGG+GGG + chr4_3:51225573-51225592 None:intergenic 50.0%
CGCAAACATCGAAGAACGAG+AGG - chr4_3:51225602-51225621 Msa0645780:three_prime_UTR 50.0%
GAAGATTGAAGTGGTGCGGA+GGG + chr4_3:51225787-51225806 None:intergenic 50.0%
AGAAGATTGAAGTGGTGCGG+AGG + chr4_3:51225788-51225807 None:intergenic 50.0%
! GAGAGGCTTTCTGAGAGAAG+AGG + chr4_3:51225815-51225834 None:intergenic 50.0%
! TCAAGCTTTTCCCAAGGGAG+GGG - chr4_3:51226530-51226549 Msa0645780:intron 50.0%
TCATGCATCTTCAAGGGGAG+GGG - chr4_3:51226633-51226652 Msa0645780:intron 50.0%
!! AAGGTTTTAGCGATGCTCGC+AGG + chr4_3:51227536-51227555 None:intergenic 50.0%
ACGGCGTAGAGTTCCAATCA+AGG + chr4_3:51227555-51227574 None:intergenic 50.0%
AAACTCGCGATCCAACTCGT+AGG - chr4_3:51228154-51228173 Msa0645780:intron 50.0%
ACTTGGACGATCCTACGAGT+TGG + chr4_3:51228168-51228187 None:intergenic 50.0%
GGGATGTGAGATCGTGAACT+TGG + chr4_3:51228185-51228204 None:intergenic 50.0%
ATTCCAACGACTTTCCGGCA+CGG + chr4_3:51228212-51228231 None:intergenic 50.0%
TGCCGGAAAGTCGTTGGAAT+CGG - chr4_3:51228212-51228231 Msa0645780:intron 50.0%
! TCGTTGGAATCGGTTCTTGG+TGG - chr4_3:51228222-51228241 Msa0645780:intron 50.0%
AACCCAGAAAACCGGGTTCT+CGG - chr4_3:51228315-51228334 Msa0645780:intron 50.0%
GACCCGAAAATCCGGATTTC+TGG + chr4_3:51228373-51228392 None:intergenic 50.0%
!!! GAAATCCGGATTTTCGGGTC+GGG - chr4_3:51228373-51228392 Msa0645780:intron 50.0%
ACAAACCCGACCCGAAAATC+CGG + chr4_3:51228381-51228400 None:intergenic 50.0%
AATCGGGGGATATCGTCACA+CGG + chr4_3:51228676-51228695 None:intergenic 50.0%
ACCATGAGATCGTGAATCGG+GGG + chr4_3:51228690-51228709 None:intergenic 50.0%
GACCATGAGATCGTGAATCG+GGG + chr4_3:51228691-51228710 None:intergenic 50.0%
GGACCATGAGATCGTGAATC+GGG + chr4_3:51228692-51228711 None:intergenic 50.0%
GGTCCTACCCGATCTTACTT+AGG - chr4_3:51228707-51228726 Msa0645780:intron 50.0%
CTAGGCATGATGCCTAAGGA+AGG - chr4_3:51229353-51229372 Msa0645780:intron 50.0%
AACCAAGGTGAGTGAGATGC+TGG - chr4_3:51230002-51230021 Msa0645780:intron 50.0%
ACCAAGGTGAGTGAGATGCT+GGG - chr4_3:51230003-51230022 Msa0645780:intron 50.0%
CCAAGCCTTCCCACTAAATG+GGG + chr4_3:51230450-51230469 None:intergenic 50.0%
GTACGTAACTCTGCTGGACA+TGG + chr4_3:51230663-51230682 None:intergenic 50.0%
GCTAAGGTACGTAACTCTGC+TGG + chr4_3:51230669-51230688 None:intergenic 50.0%
CTGACCTAGAGCTTCAGCTT+GGG + chr4_3:51230776-51230795 None:intergenic 50.0%
ACTGACCTAGAGCTTCAGCT+TGG + chr4_3:51230777-51230796 None:intergenic 50.0%
TTCTGCGCGAGAATGAGAGA+GGG + chr4_3:51231533-51231552 None:intergenic 50.0%
CTATACGAGACCCATGACGT+TGG + chr4_3:51231570-51231589 None:intergenic 50.0%
AACAGATCGGCGACGATGAA+CGG - chr4_3:51231934-51231953 Msa0645780:intron 50.0%
CGACGATGAACGATGCAGAA+AGG - chr4_3:51231983-51232002 Msa0645780:intron 50.0%
GCAGAAAGGCAGTCTCAATG+TGG - chr4_3:51231997-51232016 Msa0645780:intron 50.0%
! TCGTAATGGAGTTCCAGTCC+TGG + chr4_3:51233132-51233151 None:intergenic 50.0%
AGGAGGAAGCAAAAACCTGC+GGG + chr4_3:51233520-51233539 None:intergenic 50.0%
CAGGAGGAAGCAAAAACCTG+CGG + chr4_3:51233521-51233540 None:intergenic 50.0%
CCCGAAGTCCTAAATCTGCA+TGG - chr4_3:51233772-51233791 Msa0645780:five_prime_UTR 50.0%
AAGCAGTATTCGGCGCAAGA+AGG - chr4_3:51233803-51233822 Msa0645780:five_prime_UTR 50.0%
CCTCTCGCCACTTCCTTCTT+CGG - chr4_3:51225829-51225848 Msa0645780:three_prime_UTR 55.0%
! TCTGGTGCCGAAGAAGGAAG+TGG + chr4_3:51225839-51225858 None:intergenic 55.0%
GAAACCCTGGGCTGAATAGC+CGG - chr4_3:51228093-51228112 Msa0645780:intron 55.0%
! GAATCGGTTCTTGGTGGTCG+CGG - chr4_3:51228228-51228247 Msa0645780:intron 55.0%
ACCCAGAAAACCGGGTTCTC+GGG - chr4_3:51228316-51228335 Msa0645780:intron 55.0%
! ACCCGAGAACCCGGTTTTCT+GGG + chr4_3:51228320-51228339 None:intergenic 55.0%
! AACCCGAGAACCCGGTTTTC+TGG + chr4_3:51228321-51228340 None:intergenic 55.0%
AGAAAACCGGGTTCTCGGGT+TGG - chr4_3:51228320-51228339 Msa0645780:intron 55.0%
TCCCCCGATTCACGATCTCA+TGG - chr4_3:51228686-51228705 Msa0645780:CDS 55.0%
GCACAGACACTCCTCGGATT+AGG - chr4_3:51229001-51229020 Msa0645780:intron 55.0%
! TCCTCGGATTAGGCTTGTCC+CGG - chr4_3:51229011-51229030 Msa0645780:intron 55.0%
GATTAGGCTTGTCCCGGTGT+CGG - chr4_3:51229017-51229036 Msa0645780:intron 55.0%
ACATGACACGCATCCGACAC+CGG + chr4_3:51229033-51229052 None:intergenic 55.0%
GTCAATGTCCGTGTCGTGTC+CGG - chr4_3:51229123-51229142 Msa0645780:intron 55.0%
TCCCAGCATCTCACTCACCT+TGG + chr4_3:51230007-51230026 None:intergenic 55.0%
GCAGACCCCATTTAGTGGGA+AGG - chr4_3:51230442-51230461 Msa0645780:intron 55.0%
CCCCATTTAGTGGGAAGGCT+TGG - chr4_3:51230447-51230466 Msa0645780:intron 55.0%
GAGTCCCAAGCTGAAGCTCT+AGG - chr4_3:51230769-51230788 Msa0645780:intron 55.0%
GTTCTGCGCGAGAATGAGAG+AGG + chr4_3:51231534-51231553 None:intergenic 55.0%
CAGAAAGGAGAGCTTCCTCC+TGG - chr4_3:51233095-51233114 Msa0645780:intron 55.0%
!! CTGGTGCTACTTCTTCCAGG+AGG + chr4_3:51233113-51233132 None:intergenic 55.0%
CTCCTGGAAGAAGTAGCACC+AGG - chr4_3:51233111-51233130 Msa0645780:intron 55.0%
!! GTCCTGGTGCTACTTCTTCC+AGG + chr4_3:51233116-51233135 None:intergenic 55.0%
GGAAGAAGTAGCACCAGGAC+TGG - chr4_3:51233116-51233135 Msa0645780:intron 55.0%
CCGAAGAAGGAAGTGGCGAG+AGG + chr4_3:51225832-51225851 None:intergenic 60.0%
TCCTTCTTCGGCACCAGACC+AGG - chr4_3:51225841-51225860 Msa0645780:three_prime_UTR 60.0%
! ACCTGGTCTGGTGCCGAAGA+AGG + chr4_3:51225845-51225864 None:intergenic 60.0%
AAGATTGCGAAGCCGGTGCG+AGG - chr4_3:51225978-51225997 Msa0645780:intron 60.0%
CAGTCCGGCTATTCAGCCCA+GGG + chr4_3:51228100-51228119 None:intergenic 60.0%
TCAGTCCGGCTATTCAGCCC+AGG + chr4_3:51228101-51228120 None:intergenic 60.0%
! GGTTCTTGGTGGTCGCGGTT+TGG - chr4_3:51228233-51228252 Msa0645780:intron 60.0%
CACGAACCAACCCGAGAACC+CGG + chr4_3:51228329-51228348 None:intergenic 60.0%
!! GGGTTGGTTCGTGACCTGCT+TGG - chr4_3:51228336-51228355 Msa0645780:intron 60.0%
ACCGGGACAAGCCTAATCCG+AGG + chr4_3:51229015-51229034 None:intergenic 60.0%
CATGACACGCATCCGACACC+GGG + chr4_3:51229032-51229051 None:intergenic 60.0%
TGAAGCACGGACACGGACAC+CGG + chr4_3:51229145-51229164 None:intergenic 60.0%
TCAGGAGGCGAGGTCGAAGA+AGG - chr4_3:51229844-51229863 Msa0645780:intron 60.0%
CGTAACAGACTCAGACCCGC+AGG - chr4_3:51233502-51233521 Msa0645780:CDS 60.0%
TCGGCGCAAGAAGGATGCAC+TGG - chr4_3:51233812-51233831 Msa0645780:five_prime_UTR 60.0%
ATTGCGAAGCCGGTGCGAGG+TGG - chr4_3:51225981-51226000 Msa0645780:intron 65.0%
ATCGCTCCTCCACCTCGCAC+CGG + chr4_3:51225993-51226012 None:intergenic 65.0%
GTGCGAGGTGGAGGAGCGAT+TGG - chr4_3:51225993-51226012 Msa0645780:intron 65.0%
GGTGGAGGAGCGATTGGTGC+AGG - chr4_3:51225999-51226018 Msa0645780:intron 65.0%
ACGACTTTCCGGCACGGCGA+GGG + chr4_3:51228206-51228225 None:intergenic 65.0%
AACGACTTTCCGGCACGGCG+AGG + chr4_3:51228207-51228226 None:intergenic 65.0%
TCGCCGTGCCGGAAAGTCGT+TGG - chr4_3:51228206-51228225 Msa0645780:intron 65.0%
CACGGACACCGGACACGACA+CGG + chr4_3:51229134-51229153 None:intergenic 65.0%
CTCACATCCCCTCGCCGTGC+CGG - chr4_3:51228195-51228214 Msa0645780:intron 70.0%
CGACTTTCCGGCACGGCGAG+GGG + chr4_3:51228205-51228224 None:intergenic 70.0%
GCGAAGCCGGTGCGAGGTGG+AGG - chr4_3:51225984-51226003 Msa0645780:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 51225569 51233912 51225569 ID=Msa0645780;Name=Msa0645780
chr4_3 mRNA 51225569 51233912 51225569 ID=Msa0645780-mRNA-1;Parent=Msa0645780;Name=Msa0645780-mRNA-1;_AED=0.14;_eAED=0.14;_QI=182|1|1|1|0.90|0.83|12|390|318
chr4_3 exon 51225569 51225957 51225569 ID=Msa0645780-mRNA-1:exon:12408;Parent=Msa0645780-mRNA-1
chr4_3 exon 51226272 51226383 51226272 ID=Msa0645780-mRNA-1:exon:12407;Parent=Msa0645780-mRNA-1
chr4_3 exon 51226647 51226721 51226647 ID=Msa0645780-mRNA-1:exon:12406;Parent=Msa0645780-mRNA-1
chr4_3 exon 51228659 51228723 51228659 ID=Msa0645780-mRNA-1:exon:12405;Parent=Msa0645780-mRNA-1
chr4_3 exon 51229403 51229485 51229403 ID=Msa0645780-mRNA-1:exon:12404;Parent=Msa0645780-mRNA-1
chr4_3 exon 51229584 51229654 51229584 ID=Msa0645780-mRNA-1:exon:12403;Parent=Msa0645780-mRNA-1
chr4_3 exon 51231464 51231538 51231464 ID=Msa0645780-mRNA-1:exon:12402;Parent=Msa0645780-mRNA-1
chr4_3 exon 51232173 51232254 51232173 ID=Msa0645780-mRNA-1:exon:12401;Parent=Msa0645780-mRNA-1
chr4_3 exon 51232342 51232406 51232342 ID=Msa0645780-mRNA-1:exon:12400;Parent=Msa0645780-mRNA-1
chr4_3 exon 51233227 51233337 51233227 ID=Msa0645780-mRNA-1:exon:12399;Parent=Msa0645780-mRNA-1
chr4_3 exon 51233423 51233529 51233423 ID=Msa0645780-mRNA-1:exon:12398;Parent=Msa0645780-mRNA-1
chr4_3 exon 51233619 51233912 51233619 ID=Msa0645780-mRNA-1:exon:12397;Parent=Msa0645780-mRNA-1
chr4_3 five_prime_UTR 51233731 51233912 51233731 ID=Msa0645780-mRNA-1:five_prime_utr;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51233619 51233730 51233619 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51233423 51233529 51233423 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51233227 51233337 51233227 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51232342 51232406 51232342 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51232173 51232254 51232173 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51231464 51231538 51231464 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51229584 51229654 51229584 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51229403 51229485 51229403 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51228659 51228723 51228659 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51226647 51226721 51226647 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 CDS 51226273 51226383 51226273 ID=Msa0645780-mRNA-1:cds;Parent=Msa0645780-mRNA-1
chr4_3 three_prime_UTR 51226272 51226272 51226272 ID=Msa0645780-mRNA-1:three_prime_utr;Parent=Msa0645780-mRNA-1
chr4_3 three_prime_UTR 51225569 51225957 51225569 ID=Msa0645780-mRNA-1:three_prime_utr;Parent=Msa0645780-mRNA-1
Gene Sequence

>Msa0645780

ATGGCGACGAAGCTTCAAATATTTACACAATTACCCTCCGCACCACTTCAATCTTCTTCTTCCTCTTCTCTCAGAAAGCCTCTCGCCACTTCCTTCTTCGGCACCAGACCAGCAAACACCGTGAAATTCAGAGGAATGAAGATTGCGAAGCCGGTGCGAGGTGGAGGAGCGATTGGTGCAGGCATGAACTTATTTGAAAGATTTACGAGAGTCGTGAAGTCATACGCAAATGCTATTGTAAGTTCGTTTGAGGATCCCGAGAAAATTTTGGAGCAAGCTGTGCTTGAAATGAACGATGATTTGACTAAAATGCGCCAAGCTACAGCACAAGTGTTGGCATCTCAAAAACGGATGGAAAATAAATACAAGGCTGCAACACAAGCTTCTGAAGAGTGGTATCGTAAAGCACAACTTGCTCTTCAGAAAGGGGAAGAAGATCTTGCTCGTGAAGCACTTAAGCGGCGTAAATCTTTTGCAGAGAATGCCAGTGCTTTGAAAGCTCAACTTGATCAGCAAAAGGGTGTTGTTGACAGTCTTGTCTCAAATACACGGCTTTTGGAGAGTAAAATTCAGGAGGCGAGGTCGAAGAAGGATACTCTAAAAGCCAGAGCTCAATCTGCAAAGACTTCAACCAAGGTGAGTGAGATGCTGGGAAATGTCAATACAAGTGGTGCCCTTTCAGCTTTTGAAAAAATGGAAGAGAAAGTTATGACAATGGAGTCCCAAGCTGAAGCTCTAGGTCAGTTGACAAGTGATGATCTTGAAGGGAAGTTTGCAATGCTTGAGAGTTCATCAGTTGATGATGACCTTGCAAATTTGAAGAAAGAATTATCTGGTAGCTCAAAGAAAGGAGAGCTTCCTCCTGGAAGAAGTAGCACCAGGACTGGAACTCCATTACGAGATGCTGATATTGAGATGGAACTTGATCAACTGAGACAAAGATCAAAGGAGTTTTAA

Protein sequence

>Msa0645780

MATKLQIFTQLPSAPLQSSSSSSLRKPLATSFFGTRPANTVKFRGMKIAKPVRGGGAIGAGMNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFAENASALKAQLDQQKGVVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGRSSTRTGTPLRDADIEMELDQLRQRSKEF*