AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0471890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471890 MtrunA17_Chr3g0127491 98.356 365 5 1 1 365 1 364 0.0 736
Msa0471890 MtrunA17_Chr3g0127491 83.333 48 8 0 401 448 309 356 4.70e-18 85.5
Msa0471890 MtrunA17_Chr3g0095421 41.284 327 178 7 35 352 33 354 1.64e-77 246
Msa0471890 MtrunA17_Chr7g0274061 27.841 352 206 12 45 377 21 343 3.32e-26 109
Msa0471890 MtrunA17_Chr7g0274071 26.488 336 212 12 33 352 4 320 3.21e-25 106
Msa0471890 MtrunA17_Chr1g0204651 28.060 335 196 14 36 350 4 313 2.96e-24 103
Msa0471890 MtrunA17_Chr7g0222171 28.523 298 170 12 72 350 38 311 9.16e-24 102
Msa0471890 MtrunA17_Chr7g0221791 27.703 296 174 12 72 350 38 310 2.24e-21 95.1
Msa0471890 MtrunA17_Chr7g0274041 25.526 333 201 14 39 350 9 315 2.11e-20 92.4
Msa0471890 MtrunA17_Chr1g0169691 25.220 341 216 14 36 356 2 323 3.97e-17 82.4
Msa0471890 MtrunA17_Chr1g0167421 25.000 360 202 12 16 334 57 389 6.23e-17 82.8
Msa0471890 MtrunA17_Chr6g0479981 25.424 295 170 9 72 351 34 293 2.15e-16 80.1
Msa0471890 MtrunA17_Chr8g0380261 29.545 264 145 11 45 278 49 301 4.55e-16 80.1
Msa0471890 MtrunA17_Chr6g0480011 24.918 305 171 10 70 356 32 296 4.72e-15 76.3
Msa0471890 MtrunA17_Chr4g0009531 29.570 186 101 6 177 362 138 293 1.82e-12 68.2
Msa0471890 MtrunA17_Chr7g0243551 22.910 323 181 8 46 352 22 292 4.39e-12 67.0
Msa0471890 MtrunA17_Chr4g0049341 25.581 301 181 13 45 333 11 280 4.95e-12 67.0
Msa0471890 MtrunA17_Chr4g0036261 26.667 180 107 4 172 351 3 157 5.60e-12 64.7
Msa0471890 MtrunA17_Chr3g0121001 23.448 290 168 10 80 352 45 297 5.95e-12 66.6
Msa0471890 MtrunA17_Chr8g0368921 24.412 340 188 14 47 367 16 305 8.93e-12 66.2
Msa0471890 MtrunA17_Chr1g0173621 23.793 290 166 9 80 351 45 297 2.96e-11 64.7
Msa0471890 MtrunA17_Chr4g0036051 22.540 315 179 10 50 343 14 284 3.65e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471890 AT5G53580.1 73.842 367 90 3 1 365 3 365 0.0 570
Msa0471890 AT5G53580.1 64.583 48 17 0 401 448 310 357 2.20e-14 75.1
Msa0471890 AT1G06690.1 39.823 339 178 8 29 352 38 365 1.41e-77 248
Msa0471890 AT1G60680.1 27.628 333 198 14 38 351 8 316 2.07e-22 98.6
Msa0471890 AT1G60710.1 28.614 332 195 15 38 351 8 315 3.16e-22 98.2
Msa0471890 AT1G04690.1 27.273 341 209 15 36 356 2 323 2.59e-21 95.1
Msa0471890 AT1G10810.1 28.440 327 194 16 38 347 8 311 3.74e-21 95.1
Msa0471890 AT1G60750.1 27.273 330 196 14 33 351 4 300 1.95e-20 92.8
Msa0471890 AT1G60690.1 27.139 339 201 16 33 351 3 315 1.24e-19 90.5
Msa0471890 AT1G60730.1 26.807 332 201 15 38 351 8 315 6.00e-19 88.6
Msa0471890 AT1G60680.2 28.755 233 136 11 38 261 8 219 3.84e-15 75.5
Msa0471890 AT1G04420.1 25.641 312 169 13 5 266 9 307 3.30e-14 74.7
Msa0471890 AT1G10810.2 27.826 230 137 10 38 259 8 216 5.17e-14 72.4
Msa0471890 AT2G37760.2 23.510 302 183 11 80 368 34 300 5.27e-13 70.1
Msa0471890 AT2G37760.1 23.510 302 183 11 80 368 34 300 5.27e-13 70.1
Msa0471890 AT2G27680.1 26.667 240 156 8 39 273 48 272 1.42e-12 69.7
Msa0471890 AT2G37770.2 25.000 272 158 9 79 338 37 274 1.99e-12 68.6
Msa0471890 AT2G37760.5 24.138 290 168 12 79 351 29 283 3.67e-12 67.4
Msa0471890 AT2G37760.4 24.138 290 168 12 79 351 29 283 4.06e-12 67.4
Msa0471890 AT2G37760.3 24.138 290 168 12 79 351 29 283 4.06e-12 67.4
Msa0471890 AT2G37760.6 22.968 283 171 10 98 368 7 254 1.51e-11 65.1
Msa0471890 AT2G37760.7 22.968 283 171 10 98 368 7 254 1.51e-11 65.1
Msa0471890 AT2G37790.1 23.432 303 184 10 78 367 36 303 5.28e-11 64.3
Msa0471890 AT2G21250.1 21.595 301 164 9 73 343 26 284 8.09e-11 63.5

Find 126 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGGGTAATCAGCTTCTT+TGG 0.177516 3_3:-74264563 Msa0471890:CDS
AACACAAGCAGAGGAAAATT+TGG 0.222359 3_3:-74260727 Msa0471890:CDS
ATGGGGTAATCAGCTTCTTT+GGG 0.232653 3_3:-74264562 Msa0471890:CDS
AGCACAAGCAGAGGAAAATT+TGG 0.232721 3_3:-74258574 Msa0471890:CDS
TATGGTACTGGAAGGTTTAA+TGG 0.252604 3_3:-74264450 Msa0471890:CDS
CCTTGGTCCAGTTGGAAGTT+TGG 0.261270 3_3:+74262743 None:intergenic
TTTGATACTGCTGATTCTTA+TGG 0.261312 3_3:-74264468 Msa0471890:CDS
GAGGTCCCATCTTGAGCTTT+TGG 0.268027 3_3:+74264619 None:intergenic
AAGTCACCTCGCAGGATTAA+AGG 0.282716 3_3:-74258492 Msa0471890:CDS
TGGACTGTTGGAGCTGCTTC+AGG 0.284269 3_3:-74258451 Msa0471890:CDS
ATTCACTTCCTCAGAGAAAA+AGG 0.291423 3_3:-74263918 Msa0471890:intron
CTAGGACTTGGAATGCTTAC+TGG 0.291744 3_3:-74262780 Msa0471890:CDS
ACATGGTTTGGAAAATGTTT+TGG 0.303013 3_3:+74258428 None:intergenic
CAAGAGTATTTGTGATTCTC+TGG 0.314126 3_3:-74262829 Msa0471890:CDS
AATAACATGTTCACATGGTT+TGG 0.319142 3_3:+74258416 None:intergenic
ATTATAGTTCAGATGTATAA+AGG 0.320105 3_3:-74258383 None:intergenic
AGGATGCAGATTGAGCAAAT+TGG 0.320844 3_3:-74263703 Msa0471890:CDS
GATTTGAACCCACGCCCTTT+CGG 0.321544 3_3:+74264925 None:intergenic
CTATTTAAGCAAATACTTCC+AGG 0.333869 3_3:-74262604 Msa0471890:CDS
GGTCAAAGTGAGAAACTTCT+TGG 0.335668 3_3:-74264429 Msa0471890:CDS
ATTGACTTGACTCCGGGAAT+TGG 0.356618 3_3:+74258597 None:intergenic
AGAGGAAAATTTGGGTGCTC+TGG 0.361866 3_3:-74260718 Msa0471890:CDS
ATTGACTTGACTCCAGGAAT+TGG 0.370976 3_3:+74260750 None:intergenic
AATGTGATAACTATAGATTT+TGG 0.372920 3_3:+74259079 None:intergenic
GGCTCTGGTCCGAAAGGGCG+TGG 0.380475 3_3:-74264934 None:intergenic
CAACAGTCCAACTGAAGGTT+TGG 0.381674 3_3:+74258464 None:intergenic
TGTATCTTCAAAAGCTGCTT+TGG 0.383259 3_3:+74263326 None:intergenic
ACATAACACAAAATCAGTTT+TGG 0.387848 3_3:+74264771 None:intergenic
TATGTCAGGTTGCAATAAAT+TGG 0.388740 3_3:-74260794 Msa0471890:intron
TCTCTCAGGGAACTCAATAA+AGG 0.394660 3_3:+74262574 None:intergenic
GGCAGTTCGTCGATGCTTGC+AGG 0.397750 3_3:-74263832 Msa0471890:intron
AGCTCTTTGGGATGGTTTAG+TGG 0.402880 3_3:-74263629 Msa0471890:CDS
AGTGTGTCTCCAATGGGTTT+TGG 0.403932 3_3:-74264594 Msa0471890:CDS
CCTACCTTTGCAAAAGTAGA+TGG 0.403975 3_3:+74259034 None:intergenic
GCTGTTGGAGTGAGTAATTA+TGG 0.410867 3_3:-74263350 Msa0471890:CDS
GAGGAAAATTTGGGTGCTCT+TGG 0.425110 3_3:-74258564 Msa0471890:CDS
CGACGAACTGCCCTGGTGTA+AGG 0.426017 3_3:+74263843 None:intergenic
AAAGGTACAATTCCAATTCC+TGG 0.430013 3_3:-74260762 Msa0471890:CDS
GGATGCAGATTGAGCAAATT+GGG 0.430878 3_3:-74263702 Msa0471890:CDS
ACCTCTGAGTGTGTCTCCAA+TGG 0.431891 3_3:-74264601 Msa0471890:CDS
GTGGATCAGTTTGGTCGCTT+AGG 0.445211 3_3:+74264848 None:intergenic
CAAAGAGCTAATTCTTGAAA+AGG 0.445627 3_3:+74263643 None:intergenic
GCACAAGCAGAGGAAAATTT+GGG 0.448374 3_3:-74258573 Msa0471890:CDS
TTTAGTGGCAATGTATGATA+AGG 0.450190 3_3:-74263614 Msa0471890:intron
CAAACCTTCAGTTGGACTGT+TGG 0.456572 3_3:-74258463 Msa0471890:CDS
CCTCTGAGTGTGTCTCCAAT+GGG 0.457314 3_3:-74264600 Msa0471890:CDS
TAGGGTTTAGTTCAAGCTGT+TGG 0.459684 3_3:-74263365 Msa0471890:CDS
ACACAAGCAGAGGAAAATTT+GGG 0.461452 3_3:-74260726 Msa0471890:CDS
AAAGGTACAACTCCAATTCC+CGG 0.462816 3_3:-74258609 Msa0471890:CDS
CAACTGAAGTAGCTCGTTTG+AGG 0.463411 3_3:+74260683 None:intergenic
GCTTATAGTCCTCTAGGACT+TGG 0.463947 3_3:-74262792 Msa0471890:CDS
TGAAAGGAAAGGATGGTAAA+GGG 0.465765 3_3:+74264676 None:intergenic
ACTGCTGATTCTTATGGTAC+TGG 0.471003 3_3:-74264462 Msa0471890:CDS
TGTGTTATTGACTTGACTCC+AGG 0.471797 3_3:+74260744 None:intergenic
TGGGGTAATCAGCTTCTTTG+GGG 0.474196 3_3:-74264561 Msa0471890:CDS
CTTTCAAATTCCCTTCCCTA+TGG 0.474412 3_3:-74264659 Msa0471890:CDS
TCAGCATCCAAACTTCCAAC+TGG 0.478271 3_3:-74262750 Msa0471890:CDS
TTGAAAGGAAAGGATGGTAA+AGG 0.480670 3_3:+74264675 None:intergenic
TGTGCTATTGACTTGACTCC+GGG 0.482862 3_3:+74258591 None:intergenic
CTCAATAAAGGATCCAGTCC+TGG 0.487530 3_3:+74262586 None:intergenic
CAGCACAGCAATCGCCTCGC+AGG 0.488464 3_3:-74260653 Msa0471890:CDS
TATCCATGGCGCCTTACACC+AGG 0.489325 3_3:-74263854 Msa0471890:CDS
AGTATCGTTGTGGATCAGTT+TGG 0.492247 3_3:+74264839 None:intergenic
CAAGCATCGACGAACTGCCC+TGG 0.494104 3_3:+74263836 None:intergenic
GAGGAAAATTTGGGTGCTCT+GGG 0.495873 3_3:-74260717 Msa0471890:CDS
AAAATTTGGGTGCTCTTGGT+TGG 0.496808 3_3:-74258560 Msa0471890:CDS
ATTAGACAAGCTGCTTCAGT+TGG 0.497010 3_3:-74258529 Msa0471890:CDS
CTCAAACGAGCTACTTCAGT+TGG 0.502646 3_3:-74260682 Msa0471890:CDS
GTCAAAGTGAGAAACTTCTT+GGG 0.505278 3_3:-74264428 Msa0471890:CDS
TTTGGGTGGATGATGGCCAT+AGG 0.506984 3_3:+74264643 None:intergenic
TAAGCAAATACTTCCAGGAC+TGG 0.510322 3_3:-74262599 Msa0471890:CDS
AAAATTTGGGTGCTCTGGGT+TGG 0.513121 3_3:-74260713 Msa0471890:CDS
CAAAGTTTGCTGCTTATCCA+TGG 0.513583 3_3:-74263868 Msa0471890:CDS
GTAATTGCTTATAGTCCTCT+AGG 0.521768 3_3:-74262798 Msa0471890:CDS
TTTATTTGCAATATCTCTCA+GGG 0.524302 3_3:+74262561 None:intergenic
TAGGACTTGGAATGCTTACT+GGG 0.528436 3_3:-74262779 Msa0471890:CDS
GTGGATGATGGCCATAGGGA+AGG 0.533632 3_3:+74264648 None:intergenic
TTGGGTGGATGATGGCCATA+GGG 0.533850 3_3:+74264644 None:intergenic
TGGATGATGGCCATAGGGAA+GGG 0.537699 3_3:+74264649 None:intergenic
TTGTGCTATTGACTTGACTC+CGG 0.537889 3_3:+74258590 None:intergenic
TTTAACACGGCTGTTGAGAA+TGG 0.538207 3_3:-74264501 Msa0471890:CDS
TGCCCTGGTGTAAGGCGCCA+TGG 0.540496 3_3:+74263851 None:intergenic
GGGAATTTGAAAGGAAAGGA+TGG 0.541243 3_3:+74264669 None:intergenic
TTTCCTCACAATCATCTGAA+AGG 0.541564 3_3:-74259115 Msa0471890:CDS
CAAGAATTAGCTCTTTGGGA+TGG 0.548031 3_3:-74263637 Msa0471890:CDS
GGAAGGGAATTTGAAAGGAA+AGG 0.548679 3_3:+74264665 None:intergenic
TTGGGATAGGACAACTGCAT+TGG 0.550671 3_3:-74263684 Msa0471890:CDS
AAGAGTATTTGTGATTCTCT+GGG 0.553509 3_3:-74262828 Msa0471890:CDS
CAGATTGAGCAAATTGGGAT+AGG 0.555313 3_3:-74263697 Msa0471890:CDS
CCAAAACCAAAAGCTCAAGA+TGG 0.558116 3_3:-74264625 Msa0471890:CDS
CTGATTCTTATGGTACTGGA+AGG 0.564524 3_3:-74264458 Msa0471890:CDS
AAACGAGCTACTTCAGTTGG+AGG 0.564890 3_3:-74260679 Msa0471890:CDS
GCCCAAGTTCCAAAACCCAT+TGG 0.565398 3_3:+74264585 None:intergenic
ATTTAGGCTCTGGTCCGAAA+GGG 0.567130 3_3:-74264939 None:intergenic
GGGGTAATCAGCTTCTTTGG+GGG 0.567179 3_3:-74264560 Msa0471890:CDS
GATTTAGGCTCTGGTCCGAA+AGG 0.570412 3_3:-74264940 None:intergenic
TCAACACACCTTGGTCCAGT+TGG 0.576474 3_3:+74262735 None:intergenic
ATAAATTAGTGCATATGCAA+AGG 0.576623 3_3:-74258627 Msa0471890:intron
CATAGGGAAGGGAATTTGAA+AGG 0.580453 3_3:+74264660 None:intergenic
TTGCTGTAGATCATCATCCA+TGG 0.587813 3_3:+74264527 None:intergenic
TATCACATTAAGCATGCGCA+TGG 0.589630 3_3:-74259065 Msa0471890:CDS
TATACCTGGGCTGAGCATAA+CGG 0.590430 3_3:+74263278 None:intergenic
CAAGTCAATAGCACAAGCAG+AGG 0.593232 3_3:-74258583 Msa0471890:CDS
ATAAATTGGTGCATATGCAA+AGG 0.597596 3_3:-74260780 Msa0471890:CDS
CAAAACCAAAAGCTCAAGAT+GGG 0.598155 3_3:-74264624 Msa0471890:CDS
AAGACGCAAAACCATGTCAC+AGG 0.598290 3_3:-74262539 Msa0471890:intron
CAAGTCAATAACACAAGCAG+AGG 0.602257 3_3:-74260736 Msa0471890:CDS
AGTTCCGTTATGCTCAGCCC+AGG 0.606490 3_3:-74263282 Msa0471890:intron
CAGCACAGAAGTCACCTCGC+AGG 0.606710 3_3:-74258500 Msa0471890:CDS
AGCTCCAACAGTCCAACTGA+AGG 0.607477 3_3:+74258459 None:intergenic
TACATTGATAACAATAACAA+TGG 0.614398 3_3:-74264748 Msa0471890:exon
GCTCTGGTCCGAAAGGGCGT+GGG 0.614503 3_3:-74264933 None:intergenic
GAAACATCACAGTATCGTTG+TGG 0.616711 3_3:+74264829 None:intergenic
ATCCATGGCGCCTTACACCA+GGG 0.616890 3_3:-74263853 Msa0471890:CDS
TAGCAATCACAATTTCACTC+CGG 0.618717 3_3:+74263891 None:intergenic
GCTCCTTTCAGATGATTGTG+AGG 0.627083 3_3:+74259112 None:intergenic
AAAAGAATAACATGTTCACA+TGG 0.628583 3_3:+74258411 None:intergenic
GTAGTTAATTCGCTGTGTGG+TGG 0.636978 3_3:+74264793 None:intergenic
TTGGTAGTTAATTCGCTGTG+TGG 0.663391 3_3:+74264790 None:intergenic
CCAAACTTCCAACTGGACCA+AGG 0.674362 3_3:-74262743 Msa0471890:intron
GAAAATCCTTTAATCCTGCG+AGG 0.686989 3_3:+74258486 None:intergenic
CCCATTGGAGACACACTCAG+AGG 0.704747 3_3:+74264600 None:intergenic
CATGATTACTTGAAAGACCG+CGG 0.705238 3_3:-74263305 Msa0471890:CDS
GTAAGCATTCCAAGTCCTAG+AGG 0.710131 3_3:+74262783 None:intergenic
CTGAGCATAACGGAACTCCG+CGG 0.744710 3_3:+74263288 None:intergenic
TCTACAGCAAGTGTTTAACA+CGG 0.750193 3_3:-74264514 Msa0471890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTTGCTTTATTAATT+TGG - chr3_3:74259539-74259558 Msa0471890:intron 10.0%
!!! TTAATCCATTTTATTTAATT+TGG - chr3_3:74261132-74261151 Msa0471890:intron 10.0%
!! TAATTCCAAATTAAATAAAA+TGG + chr3_3:74261140-74261159 None:intergenic 10.0%
!! ATAATAGATTATTCAATTAA+AGG - chr3_3:74262220-74262239 Msa0471890:intron 10.0%
!! AATAAAGCAAATAATTGTAA+TGG + chr3_3:74259535-74259554 None:intergenic 15.0%
!! AATAATTCATGTTTAATAGT+AGG - chr3_3:74259726-74259745 Msa0471890:intron 15.0%
!! TTATATTTATATTGTCATCT+AGG - chr3_3:74259929-74259948 Msa0471890:intron 15.0%
!! TATATTTATATTGTCATCTA+GGG - chr3_3:74259930-74259949 Msa0471890:intron 15.0%
!!! TGTAATAATTTTGACATTTA+AGG - chr3_3:74260418-74260437 Msa0471890:intron 15.0%
!!! TACATTGATAACAATAACAA+TGG - chr3_3:74258565-74258584 Msa0471890:CDS 20.0%
!!! TTGAATGAAATGAATTTTCA+GGG - chr3_3:74259576-74259595 Msa0471890:intron 20.0%
!!! TTAGCATCAATAACTTTTTT+CGG - chr3_3:74260649-74260668 Msa0471890:CDS 20.0%
!!! TGATTTGGAATTAATAACAA+AGG + chr3_3:74260679-74260698 None:intergenic 20.0%
!! TAAAAAAAAACGAAAGTAGT+AGG + chr3_3:74260820-74260839 None:intergenic 20.0%
!!! GTCTTCTTTTTTTTTTGAAA+CGG - chr3_3:74261436-74261455 Msa0471890:intron 20.0%
!! TGGAAAAAAAAACAAATACA+AGG - chr3_3:74261510-74261529 Msa0471890:intron 20.0%
!! GGAAAAAAAAACAAATACAA+GGG - chr3_3:74261511-74261530 Msa0471890:intron 20.0%
!! GAAAAAAAAACAAATACAAG+GGG - chr3_3:74261512-74261531 Msa0471890:intron 20.0%
!!! AAATTAAAGTATTATCTTGG+AGG + chr3_3:74262042-74262061 None:intergenic 20.0%
!!! AGGAAATTAAAGTATTATCT+TGG + chr3_3:74262045-74262064 None:intergenic 20.0%
!!! TTATGCTGAGTTTTTAATAT+TGG + chr3_3:74262156-74262175 None:intergenic 20.0%
!! GACAATGAATTTATTTGATT+GGG + chr3_3:74262483-74262502 None:intergenic 20.0%
!! AGACAATGAATTTATTTGAT+TGG + chr3_3:74262484-74262503 None:intergenic 20.0%
!! TTATCCAGTTTATCAATTAT+AGG - chr3_3:74262718-74262737 Msa0471890:intron 20.0%
!! TTTATTAACCTTGAAATATC+TGG + chr3_3:74262744-74262763 None:intergenic 20.0%
!! AATATGATTCAACTTTAACA+AGG - chr3_3:74263129-74263148 Msa0471890:intron 20.0%
!!! GTTGACAATCATATATTTTT+AGG - chr3_3:74263154-74263173 Msa0471890:intron 20.0%
!! CATTAAGTAATTGGTATTAT+TGG + chr3_3:74264125-74264144 None:intergenic 20.0%
!! ATAATACCAATTACTTAATG+AGG - chr3_3:74264125-74264144 Msa0471890:intron 20.0%
!! GGAAAATAAATTCTACAAAA+TGG + chr3_3:74264183-74264202 None:intergenic 20.0%
!!! AATGTGATAACTATAGATTT+TGG + chr3_3:74264237-74264256 None:intergenic 20.0%
!! TTTAAAAAAGTAAGTTGTGT+TGG + chr3_3:74264519-74264538 None:intergenic 20.0%
!!! AACACAACTTACTTTTTTAA+AGG - chr3_3:74264518-74264537 Msa0471890:CDS 20.0%
!! AAACAGTGAATTTATTTGAT+CGG + chr3_3:74264637-74264656 None:intergenic 20.0%
! AAAAAATAATTGACAGCTGT+GGG + chr3_3:74258413-74258432 None:intergenic 25.0%
! AAAAAAATAATTGACAGCTG+TGG + chr3_3:74258414-74258433 None:intergenic 25.0%
!! ACATAACACAAAATCAGTTT+TGG + chr3_3:74258545-74258564 None:intergenic 25.0%
! AAATACACACAGAAATGAAA+AGG + chr3_3:74258961-74258980 None:intergenic 25.0%
!!! TTTTTTTTAATATGCCATCG+TGG - chr3_3:74259009-74259028 Msa0471890:intron 25.0%
!! GCACTTATAGTATAACTTTT+TGG + chr3_3:74259169-74259188 None:intergenic 25.0%
!!! ATGCAAACATTGACTTAATA+TGG - chr3_3:74259204-74259223 Msa0471890:intron 25.0%
! TAATGTGCTAGTAAAAGAAA+AGG + chr3_3:74259266-74259285 None:intergenic 25.0%
!! TTCATTTCATTCAAGTTCAA+CGG + chr3_3:74259570-74259589 None:intergenic 25.0%
!! CTTGAATGAAATGAATTTTC+AGG - chr3_3:74259575-74259594 Msa0471890:intron 25.0%
!!! TTTTCAAGAATTAGCTCTTT+GGG - chr3_3:74259672-74259691 Msa0471890:intron 25.0%
! TTTAAAGAATGGTTCACTTA+AGG + chr3_3:74259763-74259782 None:intergenic 25.0%
! ATACATTCAAATATTGCCTT+TGG - chr3_3:74260082-74260101 Msa0471890:intron 25.0%
! TATTCACTACTGAGATTAAA+AGG + chr3_3:74260115-74260134 None:intergenic 25.0%
! TCTAATTTGACAATAAACCA+TGG + chr3_3:74260142-74260161 None:intergenic 25.0%
! TGTTATTAATTCCAAATCAC+AGG - chr3_3:74260680-74260699 Msa0471890:CDS 25.0%
! GTTATTAATTCCAAATCACA+GGG - chr3_3:74260681-74260700 Msa0471890:CDS 25.0%
! TTATTAATTCCAAATCACAG+GGG - chr3_3:74260682-74260701 Msa0471890:CDS 25.0%
! TTTATTTGCAATATCTCTCA+GGG + chr3_3:74260755-74260774 None:intergenic 25.0%
!!! TTTTATTTGCAATATCTCTC+AGG + chr3_3:74260756-74260775 None:intergenic 25.0%
!!! TAAGGCATTTTTTTATCAGT+AGG - chr3_3:74261001-74261020 Msa0471890:intron 25.0%
!! GCTTGTTGGTTAATAATATT+TGG + chr3_3:74261462-74261481 None:intergenic 25.0%
!! GAGTTTTTAATATTGGCATT+TGG + chr3_3:74262149-74262168 None:intergenic 25.0%
! ACGACATTAAAAAATGAAGT+GGG + chr3_3:74262327-74262346 None:intergenic 25.0%
!!! TCCAAAATATTTTTCAAACC+AGG - chr3_3:74262687-74262706 Msa0471890:intron 25.0%
!!! ACCTGGTTTGAAAAATATTT+TGG + chr3_3:74262691-74262710 None:intergenic 25.0%
! TAAAAATGACGATTGCTTTA+GGG + chr3_3:74262974-74262993 None:intergenic 25.0%
! TTAAAAATGACGATTGCTTT+AGG + chr3_3:74262975-74262994 None:intergenic 25.0%
! AAAAACTATTGAGCATTCTT+GGG + chr3_3:74263216-74263235 None:intergenic 25.0%
! TACTTGTATAAGTCTTCAAT+CGG + chr3_3:74263308-74263327 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr3_3:74263402-74263421 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr3_3:74263401-74263420 Msa0471890:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr3_3:74263414-74263433 Msa0471890:intron 25.0%
! TTTGAATAGTGTATACTACA+TGG + chr3_3:74263587-74263606 None:intergenic 25.0%
! TTATCAGTGAAAATCGAATT+TGG - chr3_3:74263953-74263972 Msa0471890:intron 25.0%
!!! TAACTATAGATTTTGGTAGT+TGG + chr3_3:74264230-74264249 None:intergenic 25.0%
! ATAAATTAGTGCATATGCAA+AGG - chr3_3:74264686-74264705 Msa0471890:CDS 25.0%
! AAAAGAATAACATGTTCACA+TGG + chr3_3:74264905-74264924 None:intergenic 25.0%
!! TTTGATACTGCTGATTCTTA+TGG - chr3_3:74258845-74258864 Msa0471890:intron 30.0%
CATGTGATTAAACTGTTGTA+AGG + chr3_3:74259050-74259069 None:intergenic 30.0%
AAACAGCTATGAAACAACTA+AGG + chr3_3:74259097-74259116 None:intergenic 30.0%
ACATTAATGTGACTGTGTAA+GGG - chr3_3:74259280-74259299 Msa0471890:intron 30.0%
CAAAGAGCTAATTCTTGAAA+AGG + chr3_3:74259673-74259692 None:intergenic 30.0%
!! CTTTTCAAGAATTAGCTCTT+TGG - chr3_3:74259671-74259690 Msa0471890:intron 30.0%
TTTAGTGGCAATGTATGATA+AGG - chr3_3:74259699-74259718 Msa0471890:intron 30.0%
TTTAATAGTAGGATCGCATA+AGG - chr3_3:74259737-74259756 Msa0471890:intron 30.0%
! ACCATTCTTTAAAGACATTC+AGG - chr3_3:74259770-74259789 Msa0471890:intron 30.0%
! CCATTCTTTAAAGACATTCA+GGG - chr3_3:74259771-74259790 Msa0471890:intron 30.0%
!! ATTAAAAGGCATTTCTCCAA+AGG + chr3_3:74260101-74260120 None:intergenic 30.0%
TCAGTAGTGAATAATAACCA+TGG - chr3_3:74260122-74260141 Msa0471890:intron 30.0%
! TTTTCTGTTGTAGTTTCTCA+AGG + chr3_3:74260174-74260193 None:intergenic 30.0%
TTGAGAAACTACAACAGAAA+AGG - chr3_3:74260173-74260192 Msa0471890:intron 30.0%
AACAGAAAAGGAAAACGATA+AGG - chr3_3:74260185-74260204 Msa0471890:intron 30.0%
!! CACTTTTCTTTGAGTTATTC+TGG + chr3_3:74260319-74260338 None:intergenic 30.0%
ATACTGACAGCATAATTTCA+AGG + chr3_3:74260345-74260364 None:intergenic 30.0%
TGACAATAAATGAATGGTTG+TGG + chr3_3:74260369-74260388 None:intergenic 30.0%
CAACCATTCATTTATTGTCA+TGG - chr3_3:74260369-74260388 Msa0471890:intron 30.0%
AGACCATGACAATAAATGAA+TGG + chr3_3:74260375-74260394 None:intergenic 30.0%
! CAATTTTCTTTGCTAAGCAT+GGG - chr3_3:74260443-74260462 Msa0471890:intron 30.0%
! AATTTTCTTTGCTAAGCATG+GGG - chr3_3:74260444-74260463 Msa0471890:intron 30.0%
!! AAGAGTATTTGTGATTCTCT+GGG - chr3_3:74260485-74260504 Msa0471890:intron 30.0%
CTATTTAAGCAAATACTTCC+AGG - chr3_3:74260709-74260728 Msa0471890:CDS 30.0%
CGAAAGTAGTAGGTAAAAAT+AGG + chr3_3:74260810-74260829 None:intergenic 30.0%
TTTGACTGTCAATTCATTTG+AGG - chr3_3:74260914-74260933 Msa0471890:intron 30.0%
AGTAGTATATGAGTGGTTTA+AGG - chr3_3:74260983-74261002 Msa0471890:intron 30.0%
CGAGGAAAATATCTACAAAA+TGG + chr3_3:74261238-74261257 None:intergenic 30.0%
! TAATGTGAAACTACAGGTTT+TGG + chr3_3:74261289-74261308 None:intergenic 30.0%
GTTGATTAATGTGAAACTAC+AGG + chr3_3:74261295-74261314 None:intergenic 30.0%
AGTTATGTTCTCCAAAAGAT+GGG + chr3_3:74261370-74261389 None:intergenic 30.0%
AAGTTATGTTCTCCAAAAGA+TGG + chr3_3:74261371-74261390 None:intergenic 30.0%
CAAAAAAAAAAGAAGACCGA+AGG + chr3_3:74261433-74261452 None:intergenic 30.0%
AAACAAATACAAGGGGAAAT+CGG - chr3_3:74261519-74261538 Msa0471890:intron 30.0%
!!! TTGTTTTGGGTGGTTTTTTA+GGG + chr3_3:74261576-74261595 None:intergenic 30.0%
! TTAAAGTATTATCTTGGAGG+TGG + chr3_3:74262039-74262058 None:intergenic 30.0%
AGTTGTAGTGTACAAAAGAT+TGG + chr3_3:74262106-74262125 None:intergenic 30.0%
!! GAATAGTTCTGATGTTGTTA+CGG + chr3_3:74262305-74262324 None:intergenic 30.0%
CACGACATTAAAAAATGAAG+TGG + chr3_3:74262328-74262347 None:intergenic 30.0%
!! AACACAGCTTACTTTTGTAA+AGG - chr3_3:74262354-74262373 Msa0471890:intron 30.0%
!! TTGGTTGGTCTTTCTTTAAA+GGG + chr3_3:74262390-74262409 None:intergenic 30.0%
TGAATTTATTTGATTGGGCA+AGG + chr3_3:74262478-74262497 None:intergenic 30.0%
! TATGTCAGGTTGCAATAAAT+TGG - chr3_3:74262519-74262538 Msa0471890:intron 30.0%
ATAAATTGGTGCATATGCAA+AGG - chr3_3:74262533-74262552 Msa0471890:intron 30.0%
ATTATAGGCCAGATATTTCA+AGG - chr3_3:74262733-74262752 Msa0471890:intron 30.0%
AATAACAAGACAATGTCTCA+TGG - chr3_3:74262855-74262874 Msa0471890:CDS 30.0%
ATCTCATAACAAGAAAACCA+GGG - chr3_3:74262886-74262905 Msa0471890:intron 30.0%
!! TTAAGTTGGATGATCATGAT+TGG + chr3_3:74263048-74263067 None:intergenic 30.0%
TGATCATCCAACTTAATACT+TGG - chr3_3:74263052-74263071 Msa0471890:intron 30.0%
TGATTGTCCAAGTATTAAGT+TGG + chr3_3:74263062-74263081 None:intergenic 30.0%
GAAAAACTATTGAGCATTCT+TGG + chr3_3:74263217-74263236 None:intergenic 30.0%
! GTTTTTCTTTCATCTGCAAA+AGG - chr3_3:74263230-74263249 Msa0471890:intron 30.0%
TATAAGTCTTCAATCGGTAT+AGG + chr3_3:74263302-74263321 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr3_3:74263376-74263395 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr3_3:74263427-74263446 Msa0471890:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr3_3:74263499-74263518 None:intergenic 30.0%
TTGTAGGATATCCTCATTTA+AGG + chr3_3:74263562-74263581 None:intergenic 30.0%
TGTATACTACATGGAATTGT+AGG + chr3_3:74263578-74263597 None:intergenic 30.0%
!!! CTCAAAGACATTTTAAGACT+TGG - chr3_3:74263684-74263703 Msa0471890:CDS 30.0%
!!! ATTTTAAGACTTGGTAGAAG+TGG - chr3_3:74263693-74263712 Msa0471890:CDS 30.0%
!!! TTTTAAGACTTGGTAGAAGT+GGG - chr3_3:74263694-74263713 Msa0471890:CDS 30.0%
ATCAGATTGAATAGATCAAC+TGG - chr3_3:74263798-74263817 Msa0471890:intron 30.0%
TCAGATTGAATAGATCAACT+GGG - chr3_3:74263799-74263818 Msa0471890:intron 30.0%
TATGTATGTTGTAAACTTCG+AGG + chr3_3:74263981-74264000 None:intergenic 30.0%
CATTGACCTCATTAAGTAAT+TGG + chr3_3:74264134-74264153 None:intergenic 30.0%
AGTTATATTCTCCAGAAGAT+GGG + chr3_3:74264319-74264338 None:intergenic 30.0%
AAGTTATATTCTCCAGAAGA+TGG + chr3_3:74264320-74264339 None:intergenic 30.0%
! CATTTAAGGTTTGTCTTCTT+TGG + chr3_3:74264465-74264484 None:intergenic 30.0%
TTGGATGGTAGTTCTTTAAA+GGG + chr3_3:74264554-74264573 None:intergenic 30.0%
TGAATTTATTTGATCGGACA+AGG + chr3_3:74264631-74264650 None:intergenic 30.0%
ATGTATCACATTGACATGTA+AGG - chr3_3:74264658-74264677 Msa0471890:CDS 30.0%
!! ACATGGTTTGGAAAATGTTT+TGG + chr3_3:74264888-74264907 None:intergenic 30.0%
AATAACATGTTCACATGGTT+TGG + chr3_3:74264900-74264919 None:intergenic 30.0%
TGAAAGGAAAGGATGGTAAA+GGG + chr3_3:74258640-74258659 None:intergenic 35.0%
TTGAAAGGAAAGGATGGTAA+AGG + chr3_3:74258641-74258660 None:intergenic 35.0%
!!! CATCTTGAGCTTTTGGTTTT+GGG + chr3_3:74258690-74258709 None:intergenic 35.0%
CAAAACCAAAAGCTCAAGAT+GGG - chr3_3:74258689-74258708 Msa0471890:intron 35.0%
TCTACAGCAAGTGTTTAACA+CGG - chr3_3:74258799-74258818 Msa0471890:intron 35.0%
! TATGGTACTGGAAGGTTTAA+TGG - chr3_3:74258863-74258882 Msa0471890:intron 35.0%
GTCAAAGTGAGAAACTTCTT+GGG - chr3_3:74258885-74258904 Msa0471890:intron 35.0%
! AAGTTCATTCGAGATTTTCG+AGG - chr3_3:74258908-74258927 Msa0471890:intron 35.0%
AAAGGAAGCAGACAATAAGT+TGG + chr3_3:74258943-74258962 None:intergenic 35.0%
! TATTTTCATAGACTCCACGA+TGG + chr3_3:74259026-74259045 None:intergenic 35.0%
! AAAAGGCACATACATATAGC+GGG + chr3_3:74259249-74259268 None:intergenic 35.0%
! GAAAAGGCACATACATATAG+CGG + chr3_3:74259250-74259269 None:intergenic 35.0%
CACATTAATGTGACTGTGTA+AGG - chr3_3:74259279-74259298 Msa0471890:intron 35.0%
CTCCTTGATACATGTTTGAT+GGG - chr3_3:74259316-74259335 Msa0471890:intron 35.0%
TTCCCATCAAACATGTATCA+AGG + chr3_3:74259321-74259340 None:intergenic 35.0%
ACACAATTGGTGAAAACATG+AGG + chr3_3:74259375-74259394 None:intergenic 35.0%
TGAGGAAGTGAATACACAAT+TGG + chr3_3:74259388-74259407 None:intergenic 35.0%
ATTCACTTCCTCAGAGAAAA+AGG - chr3_3:74259395-74259414 Msa0471890:intron 35.0%
TTCACTTCCTCAGAGAAAAA+GGG - chr3_3:74259396-74259415 Msa0471890:intron 35.0%
TAGCAATCACAATTTCACTC+CGG + chr3_3:74259425-74259444 None:intergenic 35.0%
! CCCTGAATGTCTTTAAAGAA+TGG + chr3_3:74259774-74259793 None:intergenic 35.0%
!!! TGTTTTTTCCTAGCAAGAAC+CGG + chr3_3:74259867-74259886 None:intergenic 35.0%
TGTATCTTCAAAAGCTGCTT+TGG + chr3_3:74259990-74260009 None:intergenic 35.0%
TCATGCAAAACACTATACCT+GGG + chr3_3:74260051-74260070 None:intergenic 35.0%
ATCATGCAAAACACTATACC+TGG + chr3_3:74260052-74260071 None:intergenic 35.0%
CATTTATTGTCATGGTCTTC+TGG - chr3_3:74260377-74260396 Msa0471890:intron 35.0%
! GCAATTTTCTTTGCTAAGCA+TGG - chr3_3:74260442-74260461 Msa0471890:intron 35.0%
! ATTTTCTTTGCTAAGCATGG+GGG - chr3_3:74260445-74260464 Msa0471890:intron 35.0%
!! CAAGAGTATTTGTGATTCTC+TGG - chr3_3:74260484-74260503 Msa0471890:intron 35.0%
GTAATTGCTTATAGTCCTCT+AGG - chr3_3:74260515-74260534 Msa0471890:intron 35.0%
GAAAAAGATTACCTGTGACA+TGG + chr3_3:74260788-74260807 None:intergenic 35.0%
TAAATATGTTCCAAGCCTGA+AGG - chr3_3:74260941-74260960 Msa0471890:intron 35.0%
AAATATGTTCCAAGCCTGAA+GGG - chr3_3:74260942-74260961 Msa0471890:intron 35.0%
ACTGTGTAGTAGTATATGAG+TGG - chr3_3:74260976-74260995 Msa0471890:intron 35.0%
TTATCAGTAGGATTCGAACT+TGG - chr3_3:74261013-74261032 Msa0471890:intron 35.0%
!!! TAGACTTTGGTAGTGGTTTT+AGG - chr3_3:74261086-74261105 Msa0471890:intron 35.0%
CAACAATAGTGCTAGTGAAT+GGG - chr3_3:74261179-74261198 Msa0471890:intron 35.0%
AACAATAGTGCTAGTGAATG+GGG - chr3_3:74261180-74261199 Msa0471890:intron 35.0%
!! AAACTACAGGTTTTGGTAGT+TGG + chr3_3:74261282-74261301 None:intergenic 35.0%
!! TGTTTTGGGTGGTTTTTTAG+GGG + chr3_3:74261575-74261594 None:intergenic 35.0%
!!! CTTGTTTTGGGTGGTTTTTT+AGG + chr3_3:74261577-74261596 None:intergenic 35.0%
CTAAAAAACCACCCAAAACA+AGG - chr3_3:74261575-74261594 Msa0471890:intron 35.0%
TGTTATGTGCTATCATCCTT+CGG + chr3_3:74261830-74261849 None:intergenic 35.0%
! TCTCTTTTATGAGTGGAGTT+GGG + chr3_3:74261987-74262006 None:intergenic 35.0%
! AAACTAAAACCAAGCTCTGA+TGG - chr3_3:74262180-74262199 Msa0471890:intron 35.0%
!! GTTGGTTGGTCTTTCTTTAA+AGG + chr3_3:74262391-74262410 None:intergenic 35.0%
TTTATTTGATTGGGCAAGGT+TGG + chr3_3:74262474-74262493 None:intergenic 35.0%
! AAAGGTACAATTCCAATTCC+TGG - chr3_3:74262551-74262570 Msa0471890:CDS 35.0%
AACACAAGCAGAGGAAAATT+TGG - chr3_3:74262586-74262605 Msa0471890:CDS 35.0%
ACACAAGCAGAGGAAAATTT+GGG - chr3_3:74262587-74262606 Msa0471890:CDS 35.0%
AACTGGATAACATGTATACC+TGG + chr3_3:74262708-74262727 None:intergenic 35.0%
CTGGCCTATAATTGATAAAC+TGG + chr3_3:74262725-74262744 None:intergenic 35.0%
CATCTCATAACAAGAAAACC+AGG - chr3_3:74262885-74262904 Msa0471890:intron 35.0%
AATTGTTCAACAATCTACCC+TGG + chr3_3:74262906-74262925 None:intergenic 35.0%
! TTGGGACTTGTTTGTTTGAA+TGG + chr3_3:74263198-74263217 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr3_3:74263494-74263513 Msa0471890:intron 35.0%
ATGTTTCATCGCCTTAAATG+AGG - chr3_3:74263548-74263567 Msa0471890:intron 35.0%
! TTTAAGACTTGGTAGAAGTG+GGG - chr3_3:74263695-74263714 Msa0471890:CDS 35.0%
AAAAATTGCCAAACACCTAG+AGG - chr3_3:74263726-74263745 Msa0471890:intron 35.0%
CAGATTGAATAGATCAACTG+GGG - chr3_3:74263800-74263819 Msa0471890:intron 35.0%
TGATCCATTCTGCATAAAGT+TGG + chr3_3:74263828-74263847 None:intergenic 35.0%
GTATGAATGTCACTAAACTG+CGG - chr3_3:74263875-74263894 Msa0471890:CDS 35.0%
!! GTTTAAGGCGTTGAATATAC+TGG - chr3_3:74264043-74264062 Msa0471890:intron 35.0%
!!! CTGAGTGGTTAGTTTTACAT+CGG + chr3_3:74264093-74264112 None:intergenic 35.0%
TATTGGAATTCAAAGCTGAG+TGG + chr3_3:74264108-74264127 None:intergenic 35.0%
TTTCCTCACAATCATCTGAA+AGG - chr3_3:74264198-74264217 Msa0471890:intron 35.0%
!! AGTTCCATCTACTTTTGCAA+AGG - chr3_3:74264275-74264294 Msa0471890:intron 35.0%
GAAGAAAGATGCTTTATAGC+CGG + chr3_3:74264365-74264384 None:intergenic 35.0%
TAAGGTTTGTCTTCTTTGGT+GGG + chr3_3:74264461-74264480 None:intergenic 35.0%
TTAAGGTTTGTCTTCTTTGG+TGG + chr3_3:74264462-74264481 None:intergenic 35.0%
AGCGAACGAATTGACATTTA+AGG + chr3_3:74264479-74264498 None:intergenic 35.0%
GTTGGATGGTAGTTCTTTAA+AGG + chr3_3:74264555-74264574 None:intergenic 35.0%
TTTATTTGATCGGACAAGGT+TGG + chr3_3:74264627-74264646 None:intergenic 35.0%
AGTATCGTTGTGGATCAGTT+TGG + chr3_3:74258477-74258496 None:intergenic 40.0%
GAAACATCACAGTATCGTTG+TGG + chr3_3:74258487-74258506 None:intergenic 40.0%
! TTGGTAGTTAATTCGCTGTG+TGG + chr3_3:74258526-74258545 None:intergenic 40.0%
!!! TCTTGCTGCAGTTTTGTTGT+TGG - chr3_3:74258596-74258615 Msa0471890:CDS 40.0%
GGGAATTTGAAAGGAAAGGA+TGG + chr3_3:74258647-74258666 None:intergenic 40.0%
GGAAGGGAATTTGAAAGGAA+AGG + chr3_3:74258651-74258670 None:intergenic 40.0%
CATAGGGAAGGGAATTTGAA+AGG + chr3_3:74258656-74258675 None:intergenic 40.0%
CTTTCAAATTCCCTTCCCTA+TGG - chr3_3:74258654-74258673 Msa0471890:intron 40.0%
!!! TTTTGGTTTTGGGTGGATGA+TGG + chr3_3:74258680-74258699 None:intergenic 40.0%
!!! CCATCTTGAGCTTTTGGTTT+TGG + chr3_3:74258691-74258710 None:intergenic 40.0%
CCAAAACCAAAAGCTCAAGA+TGG - chr3_3:74258688-74258707 Msa0471890:intron 40.0%
!!! TCCAATGGGTTTTGGAACTT+GGG - chr3_3:74258727-74258746 Msa0471890:intron 40.0%
ATGGGGTAATCAGCTTCTTT+GGG - chr3_3:74258751-74258770 Msa0471890:intron 40.0%
TTGCTGTAGATCATCATCCA+TGG + chr3_3:74258789-74258808 None:intergenic 40.0%
TTTAACACGGCTGTTGAGAA+TGG - chr3_3:74258812-74258831 Msa0471890:intron 40.0%
!! ACTGCTGATTCTTATGGTAC+TGG - chr3_3:74258851-74258870 Msa0471890:intron 40.0%
! CTGATTCTTATGGTACTGGA+AGG - chr3_3:74258855-74258874 Msa0471890:intron 40.0%
GGTCAAAGTGAGAAACTTCT+TGG - chr3_3:74258884-74258903 Msa0471890:intron 40.0%
GCTCCTTGATACATGTTTGA+TGG - chr3_3:74259315-74259334 Msa0471890:intron 40.0%
TCACTTCCTCAGAGAAAAAG+GGG - chr3_3:74259397-74259416 Msa0471890:intron 40.0%
!! CAAAGTTTGCTGCTTATCCA+TGG - chr3_3:74259445-74259464 Msa0471890:intron 40.0%
!! TTTTCAGGGCATCACTAGAT+AGG - chr3_3:74259590-74259609 Msa0471890:intron 40.0%
AGGATGCAGATTGAGCAAAT+TGG - chr3_3:74259610-74259629 Msa0471890:intron 40.0%
GGATGCAGATTGAGCAAATT+GGG - chr3_3:74259611-74259630 Msa0471890:intron 40.0%
CAGATTGAGCAAATTGGGAT+AGG - chr3_3:74259616-74259635 Msa0471890:intron 40.0%
! CAAGAATTAGCTCTTTGGGA+TGG - chr3_3:74259676-74259695 Msa0471890:intron 40.0%
AGCGTAAAAGACAAGTTCAC+CGG - chr3_3:74259845-74259864 Msa0471890:intron 40.0%
! TAGGGTTTAGTTCAAGCTGT+TGG - chr3_3:74259948-74259967 Msa0471890:intron 40.0%
GCTGTTGGAGTGAGTAATTA+TGG - chr3_3:74259963-74259982 Msa0471890:intron 40.0%
CATGATTACTTGAAAGACCG+CGG - chr3_3:74260008-74260027 Msa0471890:intron 40.0%
GGCAGAAGAAATGAACTGAT+AGG - chr3_3:74260206-74260225 Msa0471890:intron 40.0%
TCTCATTCAGCAACTCAATG+AGG + chr3_3:74260272-74260291 None:intergenic 40.0%
TAGGACTTGGAATGCTTACT+GGG - chr3_3:74260534-74260553 Msa0471890:intron 40.0%
AATAGCAATCCCCTGTGATT+TGG + chr3_3:74260694-74260713 None:intergenic 40.0%
TAAGCAAATACTTCCAGGAC+TGG - chr3_3:74260714-74260733 Msa0471890:CDS 40.0%
TCTCTCAGGGAACTCAATAA+AGG + chr3_3:74260742-74260761 None:intergenic 40.0%
AATATCACTCAGTTGCTCAG+AGG - chr3_3:74260866-74260885 Msa0471890:intron 40.0%
CCATTCACTAGCACTATTGT+TGG + chr3_3:74261181-74261200 None:intergenic 40.0%
CCAACAATAGTGCTAGTGAA+TGG - chr3_3:74261178-74261197 Msa0471890:intron 40.0%
TTGATGGAACTGTAAGCATG+CGG + chr3_3:74261317-74261336 None:intergenic 40.0%
GCTTACAGTTCCATCAACTT+TGG - chr3_3:74261320-74261339 Msa0471890:intron 40.0%
AGTTCCATCAACTTTGGCAA+AGG - chr3_3:74261326-74261345 Msa0471890:intron 40.0%
CCTGAGTATGACAGAAGAAT+AGG + chr3_3:74261397-74261416 None:intergenic 40.0%
CCTATTCTTCTGTCATACTC+AGG - chr3_3:74261394-74261413 Msa0471890:intron 40.0%
! CATGTTTCGAGGGTTCTTTT+TGG + chr3_3:74261704-74261723 None:intergenic 40.0%
AAAAGAACCCTCGAAACATG+AGG - chr3_3:74261704-74261723 Msa0471890:intron 40.0%
TTGTTCGTTTAGCAGCAGTT+TGG + chr3_3:74261787-74261806 None:intergenic 40.0%
ATTTCATGCCTTAGTAGGGA+AGG + chr3_3:74261959-74261978 None:intergenic 40.0%
TCCCTACTAAGGCATGAAAT+AGG - chr3_3:74261959-74261978 Msa0471890:intron 40.0%
CCCTATTTCATGCCTTAGTA+GGG + chr3_3:74261963-74261982 None:intergenic 40.0%
CCCTACTAAGGCATGAAATA+GGG - chr3_3:74261960-74261979 Msa0471890:intron 40.0%
ACCCTATTTCATGCCTTAGT+AGG + chr3_3:74261964-74261983 None:intergenic 40.0%
! GTCTCTTTTATGAGTGGAGT+TGG + chr3_3:74261988-74262007 None:intergenic 40.0%
! CGGTTTGTCTCTTTTATGAG+TGG + chr3_3:74261994-74262013 None:intergenic 40.0%
ATTGAGTAGGACGCATTTCT+CGG + chr3_3:74262014-74262033 None:intergenic 40.0%
TTTCTATGACCATCAGAGCT+TGG + chr3_3:74262192-74262211 None:intergenic 40.0%
TAGGACAAGGACAGTTATGT+GGG + chr3_3:74262413-74262432 None:intergenic 40.0%
TTGTCAGTTGTAACACACCT+AGG + chr3_3:74262432-74262451 None:intergenic 40.0%
ACGCATCACATTGTTATGTC+AGG - chr3_3:74262505-74262524 Msa0471890:intron 40.0%
!! ATTGACTTGACTCCAGGAAT+TGG + chr3_3:74262566-74262585 None:intergenic 40.0%
!! TGTGTTATTGACTTGACTCC+AGG + chr3_3:74262572-74262591 None:intergenic 40.0%
CAAGTCAATAACACAAGCAG+AGG - chr3_3:74262577-74262596 Msa0471890:CDS 40.0%
!! ATATTTTGGATCATCCTGCG+AGG + chr3_3:74262677-74262696 None:intergenic 40.0%
TTCGTCGTATGTATCTCTTC+TGG + chr3_3:74262943-74262962 None:intergenic 40.0%
AGTCTTCAATCGGTATAGGT+TGG + chr3_3:74263298-74263317 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr3_3:74263437-74263456 Msa0471890:intron 40.0%
CGGTAGTACTAAAACTCTCA+TGG - chr3_3:74263895-74263914 Msa0471890:CDS 40.0%
TATCACATTAAGCATGCGCA+TGG - chr3_3:74264248-74264267 Msa0471890:intron 40.0%
CCTACCTTTGCAAAAGTAGA+TGG + chr3_3:74264282-74264301 None:intergenic 40.0%
!! CCATCTACTTTTGCAAAGGT+AGG - chr3_3:74264279-74264298 Msa0471890:intron 40.0%
CCTATTCTGCTGTCATATTC+CGG - chr3_3:74264343-74264362 Msa0471890:intron 40.0%
!! GGTGATCTTGATAATGAGGT+CGG + chr3_3:74264440-74264459 None:intergenic 40.0%
! GTAAGTTGTGTTGGCAAACA+CGG + chr3_3:74264510-74264529 None:intergenic 40.0%
TTAGCGCAAGGACAATTATG+CGG + chr3_3:74264578-74264597 None:intergenic 40.0%
! AAAGGTACAACTCCAATTCC+CGG - chr3_3:74264704-74264723 Msa0471890:CDS 40.0%
!! TTGTGCTATTGACTTGACTC+CGG + chr3_3:74264726-74264745 None:intergenic 40.0%
AGCACAAGCAGAGGAAAATT+TGG - chr3_3:74264739-74264758 Msa0471890:exon 40.0%
GCACAAGCAGAGGAAAATTT+GGG - chr3_3:74264740-74264759 Msa0471890:exon 40.0%
AAAATTTGGGTGCTCTTGGT+TGG - chr3_3:74264753-74264772 Msa0471890:five_prime_UTR 40.0%
ATTAGACAAGCTGCTTCAGT+TGG - chr3_3:74264784-74264803 Msa0471890:five_prime_UTR 40.0%
GAAAATCCTTTAATCCTGCG+AGG + chr3_3:74264830-74264849 None:intergenic 40.0%
! GGATTTTCCAAACCTTCAGT+TGG - chr3_3:74264842-74264861 Msa0471890:five_prime_UTR 40.0%
GTAGTTAATTCGCTGTGTGG+TGG + chr3_3:74258523-74258542 None:intergenic 45.0%
!!! CTTGAGCTTTTGGTTTTGGG+TGG + chr3_3:74258687-74258706 None:intergenic 45.0%
!! AGTGTGTCTCCAATGGGTTT+TGG - chr3_3:74258719-74258738 Msa0471890:intron 45.0%
!!! CTCCAATGGGTTTTGGAACT+TGG - chr3_3:74258726-74258745 Msa0471890:intron 45.0%
CATGGGGTAATCAGCTTCTT+TGG - chr3_3:74258750-74258769 Msa0471890:intron 45.0%
TGGGGTAATCAGCTTCTTTG+GGG - chr3_3:74258752-74258771 Msa0471890:intron 45.0%
!! TTGGGGGTATCAAGAATCCA+TGG - chr3_3:74258769-74258788 Msa0471890:intron 45.0%
GATTGCACATCAACGCAGAA+AGG + chr3_3:74259510-74259529 None:intergenic 45.0%
TTGGGATAGGACAACTGCAT+TGG - chr3_3:74259629-74259648 Msa0471890:intron 45.0%
!! AGCTCTTTGGGATGGTTTAG+TGG - chr3_3:74259684-74259703 Msa0471890:intron 45.0%
TATACCTGGGCTGAGCATAA+CGG + chr3_3:74260038-74260057 None:intergenic 45.0%
TTCAGCAACTCAATGAGGCA+TGG + chr3_3:74260267-74260286 None:intergenic 45.0%
!! GCTTATAGTCCTCTAGGACT+TGG - chr3_3:74260521-74260540 Msa0471890:intron 45.0%
GTAAGCATTCCAAGTCCTAG+AGG + chr3_3:74260533-74260552 None:intergenic 45.0%
CTAGGACTTGGAATGCTTAC+TGG - chr3_3:74260533-74260552 Msa0471890:intron 45.0%
TCAGCATCCAAACTTCCAAC+TGG - chr3_3:74260563-74260582 Msa0471890:intron 45.0%
GCGTAAATGTCAACACACCT+TGG + chr3_3:74260590-74260609 None:intergenic 45.0%
CTCAATAAAGGATCCAGTCC+TGG + chr3_3:74260730-74260749 None:intergenic 45.0%
AAGACGCAAAACCATGTCAC+AGG - chr3_3:74260774-74260793 Msa0471890:CDS 45.0%
CTACTACACAGTACACCTTC+AGG + chr3_3:74260968-74260987 None:intergenic 45.0%
CCTACCTTTGCCAAAGTTGA+TGG + chr3_3:74261333-74261352 None:intergenic 45.0%
CCATCAACTTTGGCAAAGGT+AGG - chr3_3:74261330-74261349 Msa0471890:intron 45.0%
AGGCTCTATGCATCTTCCTT+CGG - chr3_3:74261414-74261433 Msa0471890:intron 45.0%
CTTATTAGTGCGTCTTGCAC+GGG + chr3_3:74261484-74261503 None:intergenic 45.0%
GCTTATTAGTGCGTCTTGCA+CGG + chr3_3:74261485-74261504 None:intergenic 45.0%
GCAAGACGCACTAATAAGCT+CGG - chr3_3:74261486-74261505 Msa0471890:intron 45.0%
CAAGACGCACTAATAAGCTC+GGG - chr3_3:74261487-74261506 Msa0471890:intron 45.0%
! TTAGGGGTTTTTGTTCGAGC+CGG + chr3_3:74261559-74261578 None:intergenic 45.0%
!!! GGTTTGTTCCTTGTTTTGGG+TGG + chr3_3:74261586-74261605 None:intergenic 45.0%
!!! GCGGGTTTGTTCCTTGTTTT+GGG + chr3_3:74261589-74261608 None:intergenic 45.0%
!! AGCGGGTTTGTTCCTTGTTT+TGG + chr3_3:74261590-74261609 None:intergenic 45.0%
AAAACAAGGAACAAACCCGC+TGG - chr3_3:74261589-74261608 Msa0471890:intron 45.0%
!! TTTCGAGGGTTCTTTTTGGC+AGG + chr3_3:74261700-74261719 None:intergenic 45.0%
ATAGCAGCCTCATGTTTCGA+GGG + chr3_3:74261714-74261733 None:intergenic 45.0%
TATAGCAGCCTCATGTTTCG+AGG + chr3_3:74261715-74261734 None:intergenic 45.0%
! GTTTAGCAGCAGTTTGGAGT+TGG + chr3_3:74261781-74261800 None:intergenic 45.0%
!!! CTATCATCCTTCGGTGCTTT+TGG + chr3_3:74261821-74261840 None:intergenic 45.0%
AGTAGGGAAGGAAGAAGGTA+GGG + chr3_3:74261947-74261966 None:intergenic 45.0%
TAGTAGGGAAGGAAGAAGGT+AGG + chr3_3:74261948-74261967 None:intergenic 45.0%
ACCTTCTTCCTTCCCTACTA+AGG - chr3_3:74261948-74261967 Msa0471890:intron 45.0%
CTTGGAGGTGGTTATTGAGT+AGG + chr3_3:74262027-74262046 None:intergenic 45.0%
! GAATGTGGCGGAAGAAATAG+TGG + chr3_3:74262068-74262087 None:intergenic 45.0%
TTTCTTCCGCCACATTCCTT+CGG - chr3_3:74262071-74262090 Msa0471890:intron 45.0%
ATCAGAAGACCGAAGGAATG+TGG + chr3_3:74262083-74262102 None:intergenic 45.0%
AGATTGGATCAGAAGACCGA+AGG + chr3_3:74262090-74262109 None:intergenic 45.0%
ACAAGGACAGTTATGTGGGT+TGG + chr3_3:74262409-74262428 None:intergenic 45.0%
CTAGGACAAGGACAGTTATG+TGG + chr3_3:74262414-74262433 None:intergenic 45.0%
CACATAACTGTCCTTGTCCT+AGG - chr3_3:74262412-74262431 Msa0471890:intron 45.0%
GTTGTAACACACCTAGGACA+AGG + chr3_3:74262426-74262445 None:intergenic 45.0%
AGAGGAAAATTTGGGTGCTC+TGG - chr3_3:74262595-74262614 Msa0471890:CDS 45.0%
GAGGAAAATTTGGGTGCTCT+GGG - chr3_3:74262596-74262615 Msa0471890:CDS 45.0%
! AAAATTTGGGTGCTCTGGGT+TGG - chr3_3:74262600-74262619 Msa0471890:CDS 45.0%
CAACTGAAGTAGCTCGTTTG+AGG + chr3_3:74262633-74262652 None:intergenic 45.0%
CTCAAACGAGCTACTTCAGT+TGG - chr3_3:74262631-74262650 Msa0471890:intron 45.0%
AAACGAGCTACTTCAGTTGG+AGG - chr3_3:74262634-74262653 Msa0471890:intron 45.0%
GGTGCCAACTTTATGCAGAA+TGG - chr3_3:74263821-74263840 Msa0471890:intron 45.0%
TAGACCTTCGTGGTGGTTTA+AGG - chr3_3:74264028-74264047 Msa0471890:intron 45.0%
GCTCCTTTCAGATGATTGTG+AGG + chr3_3:74264204-74264223 None:intergenic 45.0%
CCGGAATATGACAGCAGAAT+AGG + chr3_3:74264346-74264365 None:intergenic 45.0%
!! GGTGGGTGATCTTGATAATG+AGG + chr3_3:74264444-74264463 None:intergenic 45.0%
TAGCGCAAGGACAATTATGC+GGG + chr3_3:74264577-74264596 None:intergenic 45.0%
! CGACATTGTCATTTAGCGCA+AGG + chr3_3:74264590-74264609 None:intergenic 45.0%
!! ATTGACTTGACTCCGGGAAT+TGG + chr3_3:74264719-74264738 None:intergenic 45.0%
!! TGTGCTATTGACTTGACTCC+GGG + chr3_3:74264725-74264744 None:intergenic 45.0%
CAAGTCAATAGCACAAGCAG+AGG - chr3_3:74264730-74264749 Msa0471890:CDS 45.0%
GAGGAAAATTTGGGTGCTCT+TGG - chr3_3:74262596-74262615 Msa0471890:CDS 45.0%
AAGTCACCTCGCAGGATTAA+AGG - chr3_3:74264821-74264840 Msa0471890:five_prime_UTR 45.0%
CAACAGTCCAACTGAAGGTT+TGG + chr3_3:74264852-74264871 None:intergenic 45.0%
CAAACCTTCAGTTGGACTGT+TGG - chr3_3:74264850-74264869 Msa0471890:five_prime_UTR 45.0%
!! AACAAAATATAAAAAAATAT+TGG - chr3_3:74263615-74263634 Msa0471890:CDS 5.0%
GATTTGAACCCACGCCCTTT+CGG + chr3_3:74258391-74258410 None:intergenic 50.0%
GTGGATCAGTTTGGTCGCTT+AGG + chr3_3:74258468-74258487 None:intergenic 50.0%
! TGGATGATGGCCATAGGGAA+GGG + chr3_3:74258667-74258686 None:intergenic 50.0%
! TTGGGTGGATGATGGCCATA+GGG + chr3_3:74258672-74258691 None:intergenic 50.0%
! TTTGGGTGGATGATGGCCAT+AGG + chr3_3:74258673-74258692 None:intergenic 50.0%
! GAGGTCCCATCTTGAGCTTT+TGG + chr3_3:74258697-74258716 None:intergenic 50.0%
ACCTCTGAGTGTGTCTCCAA+TGG - chr3_3:74258712-74258731 Msa0471890:intron 50.0%
CCTCTGAGTGTGTCTCCAAT+GGG - chr3_3:74258713-74258732 Msa0471890:intron 50.0%
GCCCAAGTTCCAAAACCCAT+TGG + chr3_3:74258731-74258750 None:intergenic 50.0%
!!! TGGGTTTTGGAACTTGGGCA+TGG - chr3_3:74258732-74258751 Msa0471890:intron 50.0%
!!! GGGTTTTGGAACTTGGGCAT+GGG - chr3_3:74258733-74258752 Msa0471890:intron 50.0%
!!! GGTTTTGGAACTTGGGCATG+GGG - chr3_3:74258734-74258753 Msa0471890:intron 50.0%
GGGGTAATCAGCTTCTTTGG+GGG - chr3_3:74258753-74258772 Msa0471890:intron 50.0%
!! CAAGTTCACCGGTTCTTGCT+AGG - chr3_3:74259856-74259875 Msa0471890:intron 50.0%
CCTTGGTCCAGTTGGAAGTT+TGG + chr3_3:74260573-74260592 None:intergenic 50.0%
CCAAACTTCCAACTGGACCA+AGG - chr3_3:74260570-74260589 Msa0471890:intron 50.0%
TCAACACACCTTGGTCCAGT+TGG + chr3_3:74260581-74260600 None:intergenic 50.0%
CAACCACTTGCGCTAGACTT+TGG - chr3_3:74261073-74261092 Msa0471890:intron 50.0%
CTACCAAAGTCTAGCGCAAG+TGG + chr3_3:74261079-74261098 None:intergenic 50.0%
CTTGCGCTAGACTTTGGTAG+TGG - chr3_3:74261079-74261098 Msa0471890:intron 50.0%
GCTCTTGTCAAACAAGTGCG+AGG + chr3_3:74261256-74261275 None:intergenic 50.0%
ATCGGTTGCCGCTAAATCAC+CGG - chr3_3:74261537-74261556 Msa0471890:intron 50.0%
TGTTCGAGCCGGTGATTTAG+CGG + chr3_3:74261548-74261567 None:intergenic 50.0%
! GGCAGGCTGTCTTTTTCTGT+GGG + chr3_3:74261683-74261702 None:intergenic 50.0%
! TGGCAGGCTGTCTTTTTCTG+TGG + chr3_3:74261684-74261703 None:intergenic 50.0%
! GAGTTGGAGTCTCGGTTTTG+AGG + chr3_3:74261765-74261784 None:intergenic 50.0%
! GCAGTTTGGAGTTGGAGTCT+CGG + chr3_3:74261773-74261792 None:intergenic 50.0%
!! GAAACCACCAAAAGCACCGA+AGG - chr3_3:74261811-74261830 Msa0471890:intron 50.0%
!!! TCATCCTTCGGTGCTTTTGG+TGG + chr3_3:74261818-74261837 None:intergenic 50.0%
! GGTTTTGCTGGGGTAGTTCT+TGG + chr3_3:74261859-74261878 None:intergenic 50.0%
!! CTGCGTTTGTGGTTTTGCTG+GGG + chr3_3:74261869-74261888 None:intergenic 50.0%
!! GCTGCGTTTGTGGTTTTGCT+GGG + chr3_3:74261870-74261889 None:intergenic 50.0%
!! TGCTGCGTTTGTGGTTTTGC+TGG + chr3_3:74261871-74261890 None:intergenic 50.0%
AGCAAAACCACAAACGCAGC+AGG - chr3_3:74261870-74261889 Msa0471890:intron 50.0%
GCAAAACCACAAACGCAGCA+GGG - chr3_3:74261871-74261890 Msa0471890:intron 50.0%
CGTTTGGCAGCTAGCTGTTT+GGG + chr3_3:74261905-74261924 None:intergenic 50.0%
CCAAACAGCTAGCTGCCAAA+CGG - chr3_3:74261903-74261922 Msa0471890:intron 50.0%
GTAGGGAAGGAAGAAGGTAG+GGG + chr3_3:74261946-74261965 None:intergenic 50.0%
GCCTTAGTAGGGAAGGAAGA+AGG + chr3_3:74261952-74261971 None:intergenic 50.0%
! TGTGGCGGAAGAAATAGTGG+AGG + chr3_3:74262065-74262084 None:intergenic 50.0%
AGAAGACCGAAGGAATGTGG+CGG + chr3_3:74262080-74262099 None:intergenic 50.0%
TGGAGCTCAGAACAAGGACA+CGG + chr3_3:74262129-74262148 None:intergenic 50.0%
! GGCATTTGGAGCTCAGAACA+AGG + chr3_3:74262135-74262154 None:intergenic 50.0%
!! GGACAGTTATGTGGGTTGGT+TGG + chr3_3:74262405-74262424 None:intergenic 50.0%
AGTCTGCAACTTGAGCTGCT+GGG + chr3_3:74262832-74262851 None:intergenic 50.0%
TCAGTCAGCCTCTAGGTGTT+TGG + chr3_3:74263737-74263756 None:intergenic 50.0%
ACCTAGAGGCTGACTGAGAT+TGG - chr3_3:74263740-74263759 Msa0471890:intron 50.0%
AACGCCTTAAACCACCACGA+AGG + chr3_3:74264035-74264054 None:intergenic 50.0%
TTTGCAAAGGTAGGCCATGC+AGG - chr3_3:74264288-74264307 Msa0471890:intron 50.0%
!! GGACAATTATGCGGGTTGGA+TGG + chr3_3:74264569-74264588 None:intergenic 50.0%
GCAAGGACAATTATGCGGGT+TGG + chr3_3:74264573-74264592 None:intergenic 50.0%
AGCTCCAACAGTCCAACTGA+AGG + chr3_3:74264857-74264876 None:intergenic 50.0%
! GTGGATGATGGCCATAGGGA+AGG + chr3_3:74258668-74258687 None:intergenic 55.0%
CCCATTGGAGACACACTCAG+AGG + chr3_3:74258716-74258735 None:intergenic 55.0%
CCTCAGAGAAAAAGGGGAGC+CGG - chr3_3:74259403-74259422 Msa0471890:intron 55.0%
TATCCATGGCGCCTTACACC+AGG - chr3_3:74259459-74259478 Msa0471890:intron 55.0%
ATCCATGGCGCCTTACACCA+GGG - chr3_3:74259460-74259479 Msa0471890:intron 55.0%
! CTGAGCATAACGGAACTCCG+CGG + chr3_3:74260028-74260047 None:intergenic 55.0%
AGTTCCGTTATGCTCAGCCC+AGG - chr3_3:74260031-74260050 Msa0471890:intron 55.0%
AGTACACCTTCAGGCCCTTC+AGG + chr3_3:74260959-74260978 None:intergenic 55.0%
AAAGATGGGCCAAGCCTGCA+GGG + chr3_3:74261356-74261375 None:intergenic 55.0%
AAAAGATGGGCCAAGCCTGC+AGG + chr3_3:74261357-74261376 None:intergenic 55.0%
! TGCAGGCTTGGCCCATCTTT+TGG - chr3_3:74261356-74261375 Msa0471890:intron 55.0%
GACGCACTAATAAGCTCGGG+TGG - chr3_3:74261490-74261509 Msa0471890:intron 55.0%
CTGCTTCTGCTCAGCTGTTG+GGG + chr3_3:74261655-74261674 None:intergenic 55.0%
GCTGCTTCTGCTCAGCTGTT+GGG + chr3_3:74261656-74261675 None:intergenic 55.0%
! TGCTGCTTCTGCTCAGCTGT+TGG + chr3_3:74261657-74261676 None:intergenic 55.0%
TGAGGCTGTGGTATGCTCGT+TGG + chr3_3:74261747-74261766 None:intergenic 55.0%
!!! GAGTCTCGGTTTTGAGGCTG+TGG + chr3_3:74261759-74261778 None:intergenic 55.0%
CCGTTTGGCAGCTAGCTGTT+TGG + chr3_3:74261906-74261925 None:intergenic 55.0%
AAGGTAGGGGTGGCTTCTTG+GGG + chr3_3:74261933-74261952 None:intergenic 55.0%
GAAGGTAGGGGTGGCTTCTT+GGG + chr3_3:74261934-74261953 None:intergenic 55.0%
AGAAGGTAGGGGTGGCTTCT+TGG + chr3_3:74261935-74261954 None:intergenic 55.0%
GTCTGCAACTTGAGCTGCTG+GGG + chr3_3:74262831-74262850 None:intergenic 55.0%
CAGTCTGCAACTTGAGCTGC+TGG + chr3_3:74262833-74262852 None:intergenic 55.0%
GCCAATCTCAGTCAGCCTCT+AGG + chr3_3:74263744-74263763 None:intergenic 55.0%
AAAGGTAGGCCATGCAGGCT+TGG - chr3_3:74264293-74264312 Msa0471890:intron 55.0%
TGGACTGTTGGAGCTGCTTC+AGG - chr3_3:74264862-74264881 Msa0471890:five_prime_UTR 55.0%
! CCGGCTCCCCTTTTTCTCTG+AGG + chr3_3:74259406-74259425 None:intergenic 60.0%
CGACGAACTGCCCTGGTGTA+AGG + chr3_3:74259473-74259492 None:intergenic 60.0%
!! CAAGCATCGACGAACTGCCC+TGG + chr3_3:74259480-74259499 None:intergenic 60.0%
GGCAGTTCGTCGATGCTTGC+AGG - chr3_3:74259481-74259500 Msa0471890:intron 60.0%
TCCAAGCCTGAAGGGCCTGA+AGG - chr3_3:74260950-74260969 Msa0471890:intron 60.0%
ACCTTCAGGCCCTTCAGGCT+TGG + chr3_3:74260954-74260973 None:intergenic 60.0%
TTGGCAAAGGTAGGCCCTGC+AGG - chr3_3:74261339-74261358 Msa0471890:intron 60.0%
AAAGGTAGGCCCTGCAGGCT+TGG - chr3_3:74261344-74261363 Msa0471890:intron 60.0%
TGCGTCTTGCACGGGCTTGT+TGG + chr3_3:74261476-74261495 None:intergenic 60.0%
AGGAACAAACCCGCTGGTCC+AGG - chr3_3:74261595-74261614 Msa0471890:intron 60.0%
CAAACCCGCTGGTCCAGGAA+CGG - chr3_3:74261600-74261619 Msa0471890:intron 60.0%
!! CTGTTGCTGGCTTCCGTTCC+TGG + chr3_3:74261616-74261635 None:intergenic 60.0%
CTGCAACGTGCAGCTGTTGC+TGG + chr3_3:74261629-74261648 None:intergenic 60.0%
CTGTCACCCTGCTGCGTTTG+TGG + chr3_3:74261880-74261899 None:intergenic 60.0%
GCTTCTTGGGGGGTTCCGTT+TGG + chr3_3:74261921-74261940 None:intergenic 60.0%
AGGTAGGGGTGGCTTCTTGG+GGG + chr3_3:74261932-74261951 None:intergenic 60.0%
GGGAAGGAAGAAGGTAGGGG+TGG + chr3_3:74261943-74261962 None:intergenic 60.0%
TCACCTGCGCTAGACCTTCG+TGG - chr3_3:74264018-74264037 Msa0471890:intron 60.0%
GAAGATGGGCCAAGCCTGCA+TGG + chr3_3:74264305-74264324 None:intergenic 60.0%
TGCAGGCTTGGCCCATCTTC+TGG - chr3_3:74264305-74264324 Msa0471890:intron 60.0%
CAGCACAGAAGTCACCTCGC+AGG - chr3_3:74264813-74264832 Msa0471890:five_prime_UTR 60.0%
! TGCCCTGGTGTAAGGCGCCA+TGG + chr3_3:74259465-74259484 None:intergenic 65.0%
GCTTCCGTTCCTGGACCAGC+GGG + chr3_3:74261607-74261626 None:intergenic 65.0%
GGCTTCCGTTCCTGGACCAG+CGG + chr3_3:74261608-74261627 None:intergenic 65.0%
GGTAGGGGTGGCTTCTTGGG+GGG + chr3_3:74261931-74261950 None:intergenic 65.0%
CAGCACAGCAATCGCCTCGC+AGG - chr3_3:74262660-74262679 Msa0471890:intron 65.0%
CCACCACGAAGGTCTAGCGC+AGG + chr3_3:74264024-74264043 None:intergenic 65.0%
CCTGCGCTAGACCTTCGTGG+TGG - chr3_3:74264021-74264040 Msa0471890:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74258386 74264949 74258386 ID=Msa0471890;Name=Msa0471890
chr3_3 mRNA 74258386 74264949 74258386 ID=Msa0471890-mRNA-1;Parent=Msa0471890;Name=Msa0471890-mRNA-1;_AED=0.18;_eAED=0.23;_QI=198|0.75|0.77|1|1|1|9|0|484
chr3_3 exon 74258386 74258640 74258386 ID=Msa0471890-mRNA-1:exon:18971;Parent=Msa0471890-mRNA-1
chr3_3 exon 74259039 74259144 74259039 ID=Msa0471890-mRNA-1:exon:18970;Parent=Msa0471890-mRNA-1
chr3_3 exon 74260627 74260808 74260627 ID=Msa0471890-mRNA-1:exon:18969;Parent=Msa0471890-mRNA-1
chr3_3 exon 74262540 74262633 74262540 ID=Msa0471890-mRNA-1:exon:18968;Parent=Msa0471890-mRNA-1
chr3_3 exon 74262744 74262895 74262744 ID=Msa0471890-mRNA-1:exon:18967;Parent=Msa0471890-mRNA-1
chr3_3 exon 74263283 74263384 74263283 ID=Msa0471890-mRNA-1:exon:18966;Parent=Msa0471890-mRNA-1
chr3_3 exon 74263615 74263738 74263615 ID=Msa0471890-mRNA-1:exon:18965;Parent=Msa0471890-mRNA-1
chr3_3 exon 74263833 74263926 74263833 ID=Msa0471890-mRNA-1:exon:18964;Parent=Msa0471890-mRNA-1
chr3_3 exon 74264406 74264949 74264406 ID=Msa0471890-mRNA-1:exon:18963;Parent=Msa0471890-mRNA-1
chr3_3 five_prime_UTR 74264752 74264949 74264752 ID=Msa0471890-mRNA-1:five_prime_utr;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74264406 74264751 74264406 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74263833 74263926 74263833 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74263615 74263738 74263615 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74263283 74263384 74263283 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74262744 74262895 74262744 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74262540 74262633 74262540 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74260627 74260808 74260627 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74259039 74259144 74259039 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
chr3_3 CDS 74258386 74258640 74258386 ID=Msa0471890-mRNA-1:cds;Parent=Msa0471890-mRNA-1
Gene Sequence

>Msa0471890

ATGGCACTCTCATCTTGCTGCAGTTTTGTTGTTGGTTCATCAAATATTAACAACCCTTTACCATCCTTTCCTTTCAAATTCCCTTCCCTATGGCCATCATCCACCCAAAACCAAAAGCTCAAGATGGGACCTCTGAGTGTGTCTCCAATGGGTTTTGGAACTTGGGCATGGGGTAATCAGCTTCTTTGGGGGTATCAAGAATCCATGGATGATGATCTACAGCAAGTGTTTAACACGGCTGTTGAGAATGGTGTTAATCTTTTTGATACTGCTGATTCTTATGGTACTGGAAGGTTTAATGGTCAAAGTGAGAAACTTCTTGGGAAGTTCATTCGAGATTTTCGAGAGAAAAAGGGGAGCCGGAGTGAAATTGTGATTGCTACAAAGTTTGCTGCTTATCCATGGCGCCTTACACCAGGGCAGTTCGTCGATGCTTGCAGGGCATCACTAGATAGGATGCAGATTGAGCAAATTGGGATAGGACAACTGCATTGGTCAACTGCAAATTACGCTCCTTTTCAAGAATTAGCTCTTTGGGATGGTTTAGTGGCAATGTATGATAAGGGTTTAGTTCAAGCTGTTGGAGTGAGTAATTATGGACCAAAGCAGCTTTTGAAGATACATGATTACTTGAAAGACCGCGGAGTTCCGTTATGCTCAGCCCAGGTGCAATTTTCTTTGCTAAGCATGGGGGAAGATCAATTAGAGATCAAGAGTATTTGTGATTCTCTGGGTATTCGCGTAATTGCTTATAGTCCTCTAGGACTTGGAATGCTTACTGGGAAATACTCAGCATCCAAACTTCCAACTGGACCAAGGGGATTGCTATTTAAGCAAATACTTCCAGGACTGGATCCTTTATTGAGTTCCCTGAGAGATATTGCAAATAAAAGACGCAAAACCATGTCACAGGTTGCAATAAATTGGTGCATATGCAAAGGTACAATTCCAATTCCTGGAGTCAAGTCAATAACACAAGCAGAGGAAAATTTGGGTGCTCTGGGTTGGCGTCTCTCCTCAAACGAGCTACTTCAGTTGGAGGATGCAGCACAGCAATCGCCTCGCAGGATGATCCAAAATATTTTTCAAACCAGAATTTATTTTCCTCACAATCATCTGAAAGGAGCATTCCAACTACCAAAATCTATAGTTATCACATTAAGCATGCGCATGGTTACAGTTCCATCTACTTTTGCAAAGTGCATATGCAAAGGTACAACTCCAATTCCCGGAGTCAAGTCAATAGCACAAGCAGAGGAAAATTTGGGTGCTCTTGGTTGGCGTCTTTCATTAGACAAGCTGCTTCAGTTGGAGTATGCAGCACAGAAGTCACCTCGCAGGATTAAAGGATTTTCCAAACCTTCAGTTGGACTGTTGGAGCTGCTTCAGGCCAAAACATTTTCCAAACCATGTGAACATGTTATTCTTTTCAAAAATTATAGTTCAGATGTATAA

Protein sequence

>Msa0471890

MALSSCCSFVVGSSNINNPLPSFPFKFPSLWPSSTQNQKLKMGPLSVSPMGFGTWAWGNQLLWGYQESMDDDLQQVFNTAVENGVNLFDTADSYGTGRFNGQSEKLLGKFIRDFREKKGSRSEIVIATKFAAYPWRLTPGQFVDACRASLDRMQIEQIGIGQLHWSTANYAPFQELALWDGLVAMYDKGLVQAVGVSNYGPKQLLKIHDYLKDRGVPLCSAQVQFSLLSMGEDQLEIKSICDSLGIRVIAYSPLGLGMLTGKYSASKLPTGPRGLLFKQILPGLDPLLSSLRDIANKRRKTMSQVAINWCICKGTIPIPGVKSITQAEENLGALGWRLSSNELLQLEDAAQQSPRRMIQNIFQTRIYFPHNHLKGAFQLPKSIVITLSMRMVTVPSTFAKCICKGTTPIPGVKSIAQAEENLGALGWRLSLDKLLQLEYAAQKSPRRIKGFSKPSVGLLELLQAKTFSKPCEHVILFKNYSSDV*