Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0499900 | XP_003599925.1 | 99.467 | 375 | 2 | 0 | 1 | 375 | 1 | 375 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0499900 | sp|Q9SJW6|ARC1B_ARATH | 77.984 | 377 | 76 | 5 | 1 | 373 | 1 | 374 | 0.0 | 591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0499900 | G7IZZ4 | 99.467 | 375 | 2 | 0 | 1 | 375 | 1 | 375 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0499900 | 0.804439 | 2.159103e-49 | -8.615850e-47 |
| Msa0085370 | Msa0499900 | 0.815852 | 7.474790e-52 | -8.615850e-47 |
| Msa0221000 | Msa0499900 | 0.825314 | 5.014490e-54 | -8.615850e-47 |
| Msa0225220 | Msa0499900 | 0.820585 | 6.345234e-53 | -8.615850e-47 |
| Msa0237210 | Msa0499900 | 0.805867 | 1.084739e-49 | -8.615850e-47 |
| Msa0365100 | Msa0499900 | 0.808213 | 3.458235e-50 | -8.615850e-47 |
| Msa0376630 | Msa0499900 | 0.822247 | 2.623711e-53 | -8.615850e-47 |
| Msa0378970 | Msa0499900 | 0.803070 | 4.154298e-49 | -8.615850e-47 |
| Msa0406770 | Msa0499900 | 0.882287 | 1.181855e-70 | -8.615850e-47 |
| Msa0427120 | Msa0499900 | 0.804538 | 2.059189e-49 | -8.615850e-47 |
| Msa0428580 | Msa0499900 | 0.820313 | 7.325994e-53 | -8.615850e-47 |
| Msa0428920 | Msa0499900 | 0.826905 | 2.098461e-54 | -8.615850e-47 |
| Msa0452710 | Msa0499900 | 0.823912 | 1.073019e-53 | -8.615850e-47 |
| Msa0474940 | Msa0499900 | 0.806916 | 6.518517e-50 | -8.615850e-47 |
| Msa0479170 | Msa0499900 | 0.828317 | 9.614511e-55 | -8.615850e-47 |
| Msa0479200 | Msa0499900 | 0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0253290 | Msa0499900 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0267920 | Msa0499900 | 0.818186 | 2.235874e-52 | -8.615850e-47 |
| Msa0300270 | Msa0499900 | 0.837487 | 5.049995e-57 | -8.615850e-47 |
| Msa0300320 | Msa0499900 | 0.835119 | 2.019841e-56 | -8.615850e-47 |
| Msa0315690 | Msa0499900 | 0.802085 | 6.631327e-49 | -8.615850e-47 |
| Msa0337700 | Msa0499900 | 0.820976 | 5.160868e-53 | -8.615850e-47 |
| Msa0342010 | Msa0499900 | 0.827480 | 1.528922e-54 | -8.615850e-47 |
| Msa0360210 | Msa0499900 | 0.886009 | 4.963563e-72 | -8.615850e-47 |
| Msa0499900 | Msa0529890 | 0.800430 | 1.446468e-48 | -8.615850e-47 |
| Msa0499900 | Msa0574390 | 0.805518 | 1.284028e-49 | -8.615850e-47 |
| Msa0499900 | Msa0576680 | 0.811492 | 6.814217e-51 | -8.615850e-47 |
| Msa0499900 | Msa0588090 | 0.802056 | 6.722901e-49 | -8.615850e-47 |
| Msa0499900 | Msa0620230 | 0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0499900 | Msa0667050 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa0499900 | Msa0687020 | 0.816088 | 6.623415e-52 | -8.615850e-47 |
| Msa0499900 | Msa0704920 | 0.825019 | 5.889872e-54 | -8.615850e-47 |
| Msa0499900 | Msa0878510 | 0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0499900 | Msa0880450 | 0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa0499900 | Msa0900620 | 0.816384 | 5.686706e-52 | -8.615850e-47 |
| Msa0499900 | Msa0926470 | 0.822956 | 1.795072e-53 | -8.615850e-47 |
| Msa0499900 | Msa0967870 | 0.806184 | 9.302707e-50 | -8.615850e-47 |
| Msa0499900 | Msa1034500 | 0.800557 | 1.362660e-48 | -8.615850e-47 |
| Msa0499900 | Msa1050910 | 0.815102 | 1.098102e-51 | -8.615850e-47 |
| Msa0499900 | Msa1050960 | 0.807585 | 4.703806e-50 | -8.615850e-47 |
| Msa0499900 | Msa1204630 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0499900 | Msa1228200 | 0.808745 | 2.663097e-50 | -8.615850e-47 |
| Msa0499900 | Msa1276660 | 0.815006 | 1.153158e-51 | -8.615850e-47 |
| Msa0499900 | Msa1307560 | 0.815573 | 8.627979e-52 | -8.615850e-47 |
| Msa0499900 | Msa1353980 | 0.826020 | 3.411248e-54 | -8.615850e-47 |
| Msa0499900 | Msa1385890 | 0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa0499900 | Msa1393570 | 0.810526 | 1.103281e-50 | -8.615850e-47 |
| Msa0499900 | Msa1425880 | 0.839821 | 1.259778e-57 | -8.615850e-47 |
| Msa0499900 | Msa1439610 | 0.816300 | 5.936629e-52 | -8.615850e-47 |
| Msa0499900 | Msa1463900 | 0.820289 | 7.419114e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0499900 | MtrunA17_Chr3g0097821 | 99.467 | 375 | 2 | 0 | 1 | 375 | 1 | 375 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0499900 | AT2G31300.1 | 77.984 | 377 | 76 | 5 | 1 | 373 | 1 | 374 | 0.0 | 591 |
| Msa0499900 | AT2G30910.3 | 77.454 | 377 | 77 | 6 | 1 | 372 | 1 | 374 | 0.0 | 590 |
| Msa0499900 | AT2G30910.1 | 77.454 | 377 | 77 | 6 | 1 | 372 | 1 | 374 | 0.0 | 590 |
| Msa0499900 | AT2G30910.2 | 75.332 | 377 | 85 | 6 | 1 | 372 | 1 | 374 | 0.0 | 571 |
| Msa0499900 | AT2G31300.2 | 78.116 | 361 | 72 | 5 | 1 | 357 | 1 | 358 | 0.0 | 565 |
Find 113 sgRNAs with CRISPR-Local
Find 631 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGCATTGTAGATTTAATT+TGG | 0.199929 | 3_4:-39360902 | Msa0499900:three_prime_UTR |
| AGAGAGACCAAAAGTGAATT+TGG | 0.202586 | 3_4:+39370986 | None:intergenic |
| TGTCACTTCGGTGTTCATTT+TGG | 0.217584 | 3_4:+39371023 | None:intergenic |
| AGTACATCTGATATGAAATT+TGG | 0.233687 | 3_4:-39363876 | Msa0499900:CDS |
| CAGCATGATCAGGTAATATC+TGG | 0.263285 | 3_4:-39367489 | Msa0499900:CDS |
| GTCTCATATTCTATATGTTT+TGG | 0.264007 | 3_4:-39360782 | Msa0499900:three_prime_UTR |
| GGTTGGTTGGTTGGTTGGTT+GGG | 0.282053 | 3_4:+39370913 | None:intergenic |
| TATCAGTTCTCTGAAGCATT+TGG | 0.292881 | 3_4:-39361424 | Msa0499900:intron |
| AACATACCCAAATTCACTTT+TGG | 0.297880 | 3_4:-39370993 | Msa0499900:five_prime_UTR |
| CTTCAGTGACAAGTGTTTCA+TGG | 0.301682 | 3_4:-39365279 | Msa0499900:CDS |
| TAAATGTATCCATGGATATT+AGG | 0.315930 | 3_4:+39360678 | None:intergenic |
| AATCACGGAACACGACATTC+TGG | 0.316967 | 3_4:+39363036 | None:intergenic |
| TTAATTTGGTTGTGAGGAAT+TGG | 0.321207 | 3_4:-39360888 | Msa0499900:three_prime_UTR |
| AAGAATTGCTGTATGGGATT+TGG | 0.350947 | 3_4:-39360983 | Msa0499900:CDS |
| GTTTCTGAGAGAACGGTAAT+AGG | 0.350950 | 3_4:-39362881 | Msa0499900:CDS |
| TGATGTGGGTCCTTCTCCTT+TGG | 0.364729 | 3_4:-39363060 | Msa0499900:CDS |
| CGCAAGAATACCAACATTAT+CGG | 0.368715 | 3_4:+39365252 | None:intergenic |
| GTACCCATTCTGATCCTTCA+AGG | 0.371878 | 3_4:+39367270 | None:intergenic |
| CTCTCATCATCTTGGACATT+CGG | 0.378975 | 3_4:-39363523 | Msa0499900:CDS |
| AGGTTGGTTGGTTGGTTGGT+TGG | 0.380168 | 3_4:+39370912 | None:intergenic |
| ATAGCATATACAAACAGTTT+TGG | 0.380254 | 3_4:+39366601 | None:intergenic |
| CTGCAGATGAAAGAGGAGTT+TGG | 0.391042 | 3_4:-39362826 | Msa0499900:intron |
| ATCAGTTCTCTGAAGCATTT+GGG | 0.393609 | 3_4:-39361423 | Msa0499900:intron |
| AGCTTGATCTCTCATCATCT+TGG | 0.394251 | 3_4:-39363531 | Msa0499900:CDS |
| ATCGTTTCCCACACCATACT+TGG | 0.404007 | 3_4:+39361384 | None:intergenic |
| TTGTACCACAACGATCTTAA+GGG | 0.408999 | 3_4:+39360636 | None:intergenic |
| ATGTGAACTTCATTATTGTT+TGG | 0.410386 | 3_4:+39368665 | None:intergenic |
| AACAAGGTTGGTTGGTTGGT+TGG | 0.411941 | 3_4:+39370908 | None:intergenic |
| TTTGTACCACAACGATCTTA+AGG | 0.419289 | 3_4:+39360635 | None:intergenic |
| GTGCTGCTCTTTGTGTTCAA+TGG | 0.424300 | 3_4:-39367220 | Msa0499900:CDS |
| GAGAGACCAAAAGTGAATTT+GGG | 0.436500 | 3_4:+39370987 | None:intergenic |
| TGGTATATTGAATATCAGTT+TGG | 0.443987 | 3_4:-39360712 | Msa0499900:three_prime_UTR |
| GTAGATTGGTCGAAGACAAA+TGG | 0.453328 | 3_4:-39368640 | Msa0499900:CDS |
| ACACAGGCACTCACGAATTC+CGG | 0.465538 | 3_4:+39367418 | None:intergenic |
| GTATCATCTGGATCAAGATA+TGG | 0.468909 | 3_4:-39362611 | Msa0499900:CDS |
| TTCATCAGATCTCACTCCGT+TGG | 0.476345 | 3_4:-39370887 | Msa0499900:five_prime_UTR |
| TTCCCACACCATACTTGGAT+TGG | 0.478929 | 3_4:+39361389 | None:intergenic |
| TGAAGTTCACATCTGTAGAT+TGG | 0.482915 | 3_4:-39368654 | Msa0499900:CDS |
| AGGTAATATCTGGGATAGAC+TGG | 0.489400 | 3_4:-39367479 | Msa0499900:CDS |
| ATCATACCTCTTGGTGAGCA+TGG | 0.490694 | 3_4:-39361157 | Msa0499900:CDS |
| TGTGTTCAATGGAGTCCAAA+AGG | 0.493426 | 3_4:-39367209 | Msa0499900:intron |
| TGTAGTTCTATCATACCTCT+TGG | 0.495135 | 3_4:-39361166 | Msa0499900:intron |
| ATCACGGAACACGACATTCT+GGG | 0.498335 | 3_4:+39363037 | None:intergenic |
| TAGATTGGTCGAAGACAAAT+GGG | 0.498387 | 3_4:-39368639 | Msa0499900:CDS |
| AACAAGTTTGCAGTGGGAAG+TGG | 0.503387 | 3_4:-39366626 | Msa0499900:CDS |
| AAAGGTGCATGTTCTTCAAA+AGG | 0.504464 | 3_4:-39368615 | Msa0499900:intron |
| AATGCATCACTTGTCACGCT+TGG | 0.505275 | 3_4:-39370813 | Msa0499900:CDS |
| GAGCGGAAGACAGTATCATC+TGG | 0.508128 | 3_4:-39362623 | Msa0499900:CDS |
| GATGAACAAGGTTGGTTGGT+TGG | 0.511182 | 3_4:+39370904 | None:intergenic |
| ATTATGAGCAGGAAAACAAC+TGG | 0.512153 | 3_4:-39366580 | Msa0499900:intron |
| TGAGGAATTGGAAGTGGTCA+AGG | 0.515676 | 3_4:-39360876 | Msa0499900:three_prime_UTR |
| TGGATGGAAGAATTGCTGTA+TGG | 0.522720 | 3_4:-39360990 | Msa0499900:CDS |
| AATTTCATGCAATGAATCAC+TGG | 0.522841 | 3_4:-39360750 | Msa0499900:three_prime_UTR |
| GCAAGAATACCAACATTATC+GGG | 0.523262 | 3_4:+39365253 | None:intergenic |
| TACCAACTCTTGTTATCCTT+AGG | 0.525803 | 3_4:-39367250 | Msa0499900:CDS |
| AGAGTGGTTACTAGATTGAT+CGG | 0.525825 | 3_4:+39370786 | None:intergenic |
| GCACTCACGAATTCCGGTCG+TGG | 0.527821 | 3_4:+39367424 | None:intergenic |
| TTGTATATGCTATTATGAGC+AGG | 0.529086 | 3_4:-39366591 | Msa0499900:CDS |
| AGATATGTCTGGAACCTTGA+AGG | 0.529442 | 3_4:-39367284 | Msa0499900:CDS |
| GGATGGAAGAATTGCTGTAT+GGG | 0.529737 | 3_4:-39360989 | Msa0499900:CDS |
| ATTATTTGTTTCTGAGAGAA+CGG | 0.529928 | 3_4:-39362888 | Msa0499900:CDS |
| ACTGATATTCAATATACCAT+TGG | 0.530493 | 3_4:+39360716 | None:intergenic |
| GAGCAGCACGGTTTAGCCTA+AGG | 0.537294 | 3_4:+39367234 | None:intergenic |
| GAACCTTGAAGGATCAGAAT+GGG | 0.538758 | 3_4:-39367273 | Msa0499900:CDS |
| CATTTACAGCCTAATATCCA+TGG | 0.541773 | 3_4:-39360687 | Msa0499900:three_prime_UTR |
| GTCTTCTGTGTTGAAACCAA+CGG | 0.542167 | 3_4:+39370871 | None:intergenic |
| GTAGATTTAATTTGGTTGTG+AGG | 0.542874 | 3_4:-39360894 | Msa0499900:three_prime_UTR |
| TACTCTGCACTTCCCATCCG+TGG | 0.545713 | 3_4:+39364036 | None:intergenic |
| ATGAGACTATGTCATCATAC+AGG | 0.545906 | 3_4:+39360798 | None:intergenic |
| TTTCTTACCTACATAAGCTA+GGG | 0.545926 | 3_4:+39363474 | None:intergenic |
| CACTCACGAATTCCGGTCGT+GGG | 0.548871 | 3_4:+39367425 | None:intergenic |
| TGGTTGTGAGGAATTGGAAG+TGG | 0.549209 | 3_4:-39360882 | Msa0499900:three_prime_UTR |
| AGCCTAAGGATAACAAGAGT+TGG | 0.549485 | 3_4:+39367248 | None:intergenic |
| ATGGGATTTGGAAAATGAGC+AGG | 0.551586 | 3_4:-39360971 | Msa0499900:CDS |
| GGTCGAAGACAAATGGGAAA+AGG | 0.558159 | 3_4:-39368633 | Msa0499900:CDS |
| GCAGAAAACAAGTTTGCAGT+GGG | 0.561048 | 3_4:-39366632 | Msa0499900:intron |
| CCTGAAACTACAGGATTGGA+TGG | 0.561224 | 3_4:-39361006 | Msa0499900:intron |
| GAGTGGTTACTAGATTGATC+GGG | 0.563409 | 3_4:+39370787 | None:intergenic |
| AGAGGCTGTAAATGTATCCA+TGG | 0.566063 | 3_4:+39360670 | None:intergenic |
| GGCAGAAAACAAGTTTGCAG+TGG | 0.567517 | 3_4:-39366633 | Msa0499900:intron |
| ATCTGATGAACAAGGTTGGT+TGG | 0.569524 | 3_4:+39370900 | None:intergenic |
| ATGTTATTGCGATGTCACTT+CGG | 0.570772 | 3_4:+39371011 | None:intergenic |
| GGAACCTTGAAGGATCAGAA+TGG | 0.576474 | 3_4:-39367274 | Msa0499900:CDS |
| AGCATGATCAGGTAATATCT+GGG | 0.579626 | 3_4:-39367488 | Msa0499900:CDS |
| TAGTTACTTCATCCCACGAC+CGG | 0.580689 | 3_4:-39367437 | Msa0499900:CDS |
| GGCCAATCCAAGTATGGTGT+GGG | 0.581786 | 3_4:-39361391 | Msa0499900:CDS |
| ACATTCTGGGCCAAAGGAGA+AGG | 0.582007 | 3_4:+39363050 | None:intergenic |
| AATAAGCTTATAATTCAAGA+AGG | 0.583387 | 3_4:+39360947 | None:intergenic |
| GAGAGAACGGTAATAGGTGT+GGG | 0.585251 | 3_4:-39362875 | Msa0499900:CDS |
| CTTGCGACAACATCCACGGA+TGG | 0.586607 | 3_4:-39364049 | Msa0499900:CDS |
| TGAGAGAACGGTAATAGGTG+TGG | 0.589873 | 3_4:-39362876 | Msa0499900:CDS |
| TGGATCAAGATATGGCTCAC+AGG | 0.591647 | 3_4:-39362603 | Msa0499900:intron |
| GGCAATACCCTAGCTTATGT+AGG | 0.594026 | 3_4:-39363481 | Msa0499900:intron |
| CAATTCCCTTAAGATCGTTG+TGG | 0.597184 | 3_4:-39360641 | None:intergenic |
| TGGCCAATCCAAGTATGGTG+TGG | 0.598684 | 3_4:-39361392 | Msa0499900:CDS |
| TTAAGGGAATTGAATATGAG+AGG | 0.598892 | 3_4:+39360652 | None:intergenic |
| ACTGGAAAATATATAACCAA+TGG | 0.601287 | 3_4:-39360732 | Msa0499900:three_prime_UTR |
| TTGCGACAACATCCACGGAT+GGG | 0.605771 | 3_4:-39364048 | Msa0499900:CDS |
| TAAGCTAGGGTATTGCCACT+TGG | 0.608759 | 3_4:+39363487 | None:intergenic |
| AACACGACATTCTGGGCCAA+AGG | 0.611884 | 3_4:+39363044 | None:intergenic |
| TCTTCTTGCGACAACATCCA+CGG | 0.612313 | 3_4:-39364053 | Msa0499900:CDS |
| ATCTGATATGAAATTTGGAG+AGG | 0.617391 | 3_4:-39363871 | Msa0499900:intron |
| GGGATATGATTGTAACCCAA+TGG | 0.637775 | 3_4:-39362855 | Msa0499900:CDS |
| CATCACGGAGAGGCAAATCA+CGG | 0.642366 | 3_4:+39363021 | None:intergenic |
| TTGTCAGGTATCTTGGAGAG+CGG | 0.646625 | 3_4:-39362640 | Msa0499900:CDS |
| CTTGGACATTCGGAGTCAAG+TGG | 0.649894 | 3_4:-39363513 | Msa0499900:CDS |
| ATTGAACACAAAGAGCAGCA+CGG | 0.658833 | 3_4:+39367222 | None:intergenic |
| AATGTTCCATGCTCACCAAG+AGG | 0.660956 | 3_4:+39361151 | None:intergenic |
| TGCTGACCCACATCACGGAG+AGG | 0.674971 | 3_4:+39363011 | None:intergenic |
| TGAGATCTGATGAACAAGGT+TGG | 0.691301 | 3_4:+39370896 | None:intergenic |
| GTGAGCATGGAACATTGACA+AGG | 0.696012 | 3_4:-39361144 | Msa0499900:CDS |
| GGAGTCAAGTGGTCACCAAG+TGG | 0.703568 | 3_4:-39363502 | Msa0499900:CDS |
| GGAGTGAGATCTGATGAACA+AGG | 0.766499 | 3_4:+39370892 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATTAATTATTAATTT+GGG | + | chr3_4:39363101-39363120 | None:intergenic | 0.0% |
| !! | TAAAAATAAATAAATTATAT+AGG | + | chr3_4:39364836-39364855 | None:intergenic | 0.0% |
| !!! | ATATAATTTATTTATTTTTA+TGG | - | chr3_4:39364836-39364855 | Msa0499900:intron | 0.0% |
| !! | ATAATTTATAAAAGAGAAAT+TGG | + | chr3_4:39364321-39364340 | None:intergenic | 10.0% |
| !!! | GAATTAAATTAACATTTTTA+TGG | - | chr3_4:39364524-39364543 | Msa0499900:intron | 10.0% |
| !! | AAATAAATAAATTATATAGG+TGG | + | chr3_4:39364833-39364852 | None:intergenic | 10.0% |
| !!! | TTTTTCAGAAAAAAATAATA+TGG | - | chr3_4:39365447-39365466 | Msa0499900:intron | 10.0% |
| !!! | TTTTTTTTTTTAAAAGAAAC+AGG | + | chr3_4:39366101-39366120 | None:intergenic | 10.0% |
| !! | AATTTCAAAAAAAAAATCAT+TGG | - | chr3_4:39366295-39366314 | Msa0499900:intron | 10.0% |
| !! | ATTTCAAAAAAAAAATCATT+GGG | - | chr3_4:39366296-39366315 | Msa0499900:intron | 10.0% |
| !!! | ATTTTGAAACAATTTTTTTT+TGG | - | chr3_4:39366741-39366760 | Msa0499900:intron | 10.0% |
| !!! | ATAAGAATATATTTTGATAT+AGG | + | chr3_4:39367237-39367256 | None:intergenic | 10.0% |
| !! | AAATGAATTAAAAAATTTGT+TGG | - | chr3_4:39367400-39367419 | Msa0499900:intron | 10.0% |
| !! | TTATTAAAATAGTACTATTA+AGG | - | chr3_4:39368359-39368378 | Msa0499900:intron | 10.0% |
| !! | TATTAAAATAGTACTATTAA+GGG | - | chr3_4:39368360-39368379 | Msa0499900:intron | 10.0% |
| !!! | TTTTTAAAAAAGAATACAAA+CGG | + | chr3_4:39368448-39368467 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTAAAAATATTTG+GGG | - | chr3_4:39368454-39368473 | Msa0499900:intron | 10.0% |
| !! | TATTTAGACTTATATATCAT+TGG | - | chr3_4:39362846-39362865 | Msa0499900:CDS | 15.0% |
| !! | AATTAAATTAAAAGTTCAGA+AGG | - | chr3_4:39363255-39363274 | Msa0499900:intron | 15.0% |
| !! | AACTTATGTCTTTAATATTT+GGG | + | chr3_4:39363334-39363353 | None:intergenic | 15.0% |
| !! | AAACTTATGTCTTTAATATT+TGG | + | chr3_4:39363335-39363354 | None:intergenic | 15.0% |
| !! | AAATTCAATCATGATAATAT+TGG | + | chr3_4:39363908-39363927 | None:intergenic | 15.0% |
| !! | TTATAAATAAAAATGCATCA+GGG | + | chr3_4:39363933-39363952 | None:intergenic | 15.0% |
| !! | ATTATAAATAAAAATGCATC+AGG | + | chr3_4:39363934-39363953 | None:intergenic | 15.0% |
| !!! | TTATAATAAAGCTTCTATTT+TGG | - | chr3_4:39364107-39364126 | Msa0499900:intron | 15.0% |
| !! | AATGTTAATTTAATTCTAGA+AGG | + | chr3_4:39364520-39364539 | None:intergenic | 15.0% |
| !! | GAAATATTAAGACAATTATT+TGG | + | chr3_4:39364869-39364888 | None:intergenic | 15.0% |
| !! | AATAATGTAAACATATGAAA+TGG | + | chr3_4:39366014-39366033 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr3_4:39366637-39366656 | Msa0499900:intron | 15.0% |
| !! | TTTCAAAAATAGTAAAGTAT+CGG | + | chr3_4:39367488-39367507 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAAGAATACAAAC+GGG | + | chr3_4:39368447-39368466 | None:intergenic | 15.0% |
| !!! | TCTTTTTTAAAAATATTTGG+GGG | - | chr3_4:39368455-39368474 | Msa0499900:intron | 15.0% |
| !! | ATGAAATTATTTAGAGAAAA+TGG | - | chr3_4:39369443-39369462 | Msa0499900:intron | 15.0% |
| !! | TGAAATTATTTAGAGAAAAT+GGG | - | chr3_4:39369444-39369463 | Msa0499900:intron | 15.0% |
| !!! | AATGTTAAAAAGTTTTAAAC+AGG | - | chr3_4:39369998-39370017 | Msa0499900:intron | 15.0% |
| !! | ATACTAACATAAAATATGAT+TGG | + | chr3_4:39370027-39370046 | None:intergenic | 15.0% |
| !! | ATATATAATATAACCAACTA+TGG | + | chr3_4:39370395-39370414 | None:intergenic | 15.0% |
| !! | AAAAACAATGAAATCAAACA+AGG | + | chr3_4:39360932-39360951 | None:intergenic | 20.0% |
| !!! | TTAATATGTTTGCTAATGTT+AGG | - | chr3_4:39361190-39361209 | Msa0499900:intron | 20.0% |
| !!! | ATTGTTTCTATAAACTATCT+TGG | - | chr3_4:39361484-39361503 | Msa0499900:intron | 20.0% |
| !!! | GTTTTTGTCTAATTTTCATT+AGG | + | chr3_4:39361513-39361532 | None:intergenic | 20.0% |
| !! | TATAAAATAATCTGTAACAG+TGG | - | chr3_4:39361866-39361885 | Msa0499900:intron | 20.0% |
| !! | AACATTACTTGTGAAATATT+TGG | + | chr3_4:39362088-39362107 | None:intergenic | 20.0% |
| !! | AGAAGGAAAGAAAAAAAAAA+GGG | + | chr3_4:39362263-39362282 | None:intergenic | 20.0% |
| !! | TAGAAGGAAAGAAAAAAAAA+AGG | + | chr3_4:39362264-39362283 | None:intergenic | 20.0% |
| !!! | ATTGTTTGCCATTTTTAAAA+GGG | + | chr3_4:39362456-39362475 | None:intergenic | 20.0% |
| !!! | AATTGTTTGCCATTTTTAAA+AGG | + | chr3_4:39362457-39362476 | None:intergenic | 20.0% |
| !! | TAAAAATGGCAAACAATTAT+TGG | - | chr3_4:39362459-39362478 | Msa0499900:intron | 20.0% |
| !!! | AACCTATAATTTTGCTAATT+GGG | + | chr3_4:39362616-39362635 | None:intergenic | 20.0% |
| !! | GTCATTAAACAGAAAAAAAA+AGG | + | chr3_4:39362813-39362832 | None:intergenic | 20.0% |
| !! | ACTTATGTCTTTAATATTTG+GGG | + | chr3_4:39363333-39363352 | None:intergenic | 20.0% |
| !! | TAATGATGAAACAACTAATT+TGG | - | chr3_4:39363950-39363969 | Msa0499900:intron | 20.0% |
| !! | AAAAAGAAATACATCAAGAA+AGG | + | chr3_4:39364074-39364093 | None:intergenic | 20.0% |
| !!! | TTAATTTAATTCTAGAAGGT+CGG | + | chr3_4:39364516-39364535 | None:intergenic | 20.0% |
| !! | TGTAATGTAAATGTAAATAC+TGG | - | chr3_4:39364755-39364774 | Msa0499900:intron | 20.0% |
| !! | GTAATGTAAATGTAAATACT+GGG | - | chr3_4:39364756-39364775 | Msa0499900:intron | 20.0% |
| !! | TAATGTAAATGTAAATACTG+GGG | - | chr3_4:39364757-39364776 | Msa0499900:intron | 20.0% |
| !! | TAAAACCATATAACTTCTAA+AGG | + | chr3_4:39364992-39365011 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAAGAAACAGGTT+GGG | + | chr3_4:39366096-39366115 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAAAGAAACAGGT+TGG | + | chr3_4:39366097-39366116 | None:intergenic | 20.0% |
| !! | ATTCTATTTATATCAACTAG+AGG | + | chr3_4:39366265-39366284 | None:intergenic | 20.0% |
| !! | AATGATTAAGAGAAAGATAA+TGG | - | chr3_4:39366580-39366599 | Msa0499900:intron | 20.0% |
| !! | AATAGCTAATAAGGATAATT+TGG | + | chr3_4:39366614-39366633 | None:intergenic | 20.0% |
| !! | AAATTATCCTTATTAGCTAT+TGG | - | chr3_4:39366613-39366632 | Msa0499900:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr3_4:39366700-39366719 | Msa0499900:intron | 20.0% |
| !! | AAACAACAATCAAAGTAATA+AGG | + | chr3_4:39366909-39366928 | None:intergenic | 20.0% |
| !!! | GAATATATTTTGATATAGGT+AGG | + | chr3_4:39367233-39367252 | None:intergenic | 20.0% |
| !! | TTTGTAGTTAAAATGATGTA+AGG | - | chr3_4:39367290-39367309 | Msa0499900:intron | 20.0% |
| !! | AAAAAATATCAGACACATAT+AGG | - | chr3_4:39367442-39367461 | Msa0499900:CDS | 20.0% |
| !! | CGTTAAAATATATTTGATGT+CGG | - | chr3_4:39367544-39367563 | Msa0499900:intron | 20.0% |
| !! | ATCTTGAAAATAAAGAGAAA+AGG | + | chr3_4:39367720-39367739 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTGAACTTTTAAT+AGG | - | chr3_4:39367940-39367959 | Msa0499900:intron | 20.0% |
| !! | AACATGAAAAAGAAACATAT+AGG | + | chr3_4:39368266-39368285 | None:intergenic | 20.0% |
| !!! | AAAAATGTATTGATGCTATT+AGG | - | chr3_4:39368384-39368403 | Msa0499900:intron | 20.0% |
| !!! | ATATATTTTGTTGATGATGT+GGG | - | chr3_4:39368593-39368612 | Msa0499900:intron | 20.0% |
| !! | GAAAATATCAGTAAATCATT+CGG | + | chr3_4:39368722-39368741 | None:intergenic | 20.0% |
| !!! | AATGATTTACTGATATTTTC+TGG | - | chr3_4:39368722-39368741 | Msa0499900:intron | 20.0% |
| !! | GAAATTATTTAGAGAAAATG+GGG | - | chr3_4:39369445-39369464 | Msa0499900:intron | 20.0% |
| !! | AAATTATTTAGAGAAAATGG+GGG | - | chr3_4:39369446-39369465 | Msa0499900:intron | 20.0% |
| !! | TCATCAATGGTTATAATATT+TGG | - | chr3_4:39369774-39369793 | Msa0499900:intron | 20.0% |
| !! | TTATTAAACTCTATGAACTT+TGG | + | chr3_4:39369964-39369983 | None:intergenic | 20.0% |
| !!! | TTTTTCTCTCTGTTAAATTA+AGG | - | chr3_4:39370183-39370202 | Msa0499900:intron | 20.0% |
| !! | AATAAGCTTATAATTCAAGA+AGG | + | chr3_4:39370723-39370742 | None:intergenic | 20.0% |
| ! | AAACAAGGTTTGAATCAAAA+AGG | + | chr3_4:39360917-39360936 | None:intergenic | 25.0% |
| ! | CTACTTATAGACGTATTATA+AGG | - | chr3_4:39361532-39361551 | Msa0499900:intron | 25.0% |
| ! | CTTGTGAAATATTTGGTATA+CGG | + | chr3_4:39362081-39362100 | None:intergenic | 25.0% |
| !! | TTGCGTATTTTCTAATTATG+AGG | - | chr3_4:39362142-39362161 | Msa0499900:intron | 25.0% |
| ! | AAATTGAAAAGTCAAGTAGT+AGG | - | chr3_4:39362168-39362187 | Msa0499900:intron | 25.0% |
| ! | AAAAAAAAAGGGACAAAAAG+AGG | + | chr3_4:39362252-39362271 | None:intergenic | 25.0% |
| !!! | TCTTATTTGAGAGTTTTAGA+AGG | + | chr3_4:39362280-39362299 | None:intergenic | 25.0% |
| !!! | TTCTAAAACTCTCAAATAAG+AGG | - | chr3_4:39362279-39362298 | Msa0499900:intron | 25.0% |
| !! | TCTAAAACTCTCAAATAAGA+GGG | - | chr3_4:39362280-39362299 | Msa0499900:intron | 25.0% |
| !!! | TTGTTTGCCATTTTTAAAAG+GGG | + | chr3_4:39362455-39362474 | None:intergenic | 25.0% |
| !!! | AATAATGAAAGCATCACTAA+GGG | + | chr3_4:39362504-39362523 | None:intergenic | 25.0% |
| !!! | TAATAATGAAAGCATCACTA+AGG | + | chr3_4:39362505-39362524 | None:intergenic | 25.0% |
| !! | CAACCTATAATTTTGCTAAT+TGG | + | chr3_4:39362617-39362636 | None:intergenic | 25.0% |
| ! | TAATATTTGAAAGAGATGTG+TGG | + | chr3_4:39362943-39362962 | None:intergenic | 25.0% |
| ! | ATGTGAACTTCATTATTGTT+TGG | + | chr3_4:39363005-39363024 | None:intergenic | 25.0% |
| ! | ATGAAGATAAAATAACAGTG+TGG | - | chr3_4:39363174-39363193 | Msa0499900:intron | 25.0% |
| ! | ACATGTTAGTAGTGATTTAA+AGG | + | chr3_4:39363233-39363252 | None:intergenic | 25.0% |
| ! | AACTATAAAGTAACATTCAC+AGG | - | chr3_4:39363294-39363313 | Msa0499900:intron | 25.0% |
| ! | TTAATAATATTTCATGAGCC+AGG | + | chr3_4:39363667-39363686 | None:intergenic | 25.0% |
| ! | GGCTCATGAAATATTATTAA+TGG | - | chr3_4:39363667-39363686 | Msa0499900:intron | 25.0% |
| ! | TTAATAATATTTCATGAGCC+AGG | + | chr3_4:39363667-39363686 | None:intergenic | 25.0% |
| !!! | AATAAAGCTTCTATTTTGGT+TGG | - | chr3_4:39364111-39364130 | Msa0499900:intron | 25.0% |
| ! | TATAAAAGAGAAATTGGCAA+CGG | + | chr3_4:39364315-39364334 | None:intergenic | 25.0% |
| !! | ATAGCATATACAAACAGTTT+TGG | + | chr3_4:39365069-39365088 | None:intergenic | 25.0% |
| !!! | TATGTTGGGTGATTTTTTAT+TGG | - | chr3_4:39365296-39365315 | Msa0499900:CDS | 25.0% |
| !!! | TGATTTTTTATTGGTTTGCA+AGG | - | chr3_4:39365305-39365324 | Msa0499900:CDS | 25.0% |
| !!! | CCATTCTAAAAGATTAGTTT+GGG | + | chr3_4:39365343-39365362 | None:intergenic | 25.0% |
| !! | TCCATTCTAAAAGATTAGTT+TGG | + | chr3_4:39365344-39365363 | None:intergenic | 25.0% |
| ! | TAAATGGTTAAGTAATACCA+AGG | + | chr3_4:39365396-39365415 | None:intergenic | 25.0% |
| ! | CTTAACCATTTAAATTGATG+AGG | - | chr3_4:39365404-39365423 | Msa0499900:intron | 25.0% |
| ! | CTATACCTCATCAATTTAAA+TGG | + | chr3_4:39365412-39365431 | None:intergenic | 25.0% |
| !!! | TGTTTTGATTTTGTAGGAAA+AGG | + | chr3_4:39365506-39365525 | None:intergenic | 25.0% |
| ! | TTTCCTACAAAATCAAAACA+TGG | - | chr3_4:39365506-39365525 | Msa0499900:intron | 25.0% |
| ! | GTTTGTATATGATTTATGAC+AGG | - | chr3_4:39366052-39366071 | Msa0499900:intron | 25.0% |
| ! | ATAATTTATATTACCTCTGC+AGG | - | chr3_4:39366331-39366350 | Msa0499900:intron | 25.0% |
| ! | AAACTAACCAATAGCTAATA+AGG | + | chr3_4:39366623-39366642 | None:intergenic | 25.0% |
| ! | ATTACAATTGTGCTTATAGT+TGG | - | chr3_4:39367331-39367350 | Msa0499900:intron | 25.0% |
| !! | GTATTTTCCACCTTTATAAA+AGG | - | chr3_4:39367651-39367670 | Msa0499900:intron | 25.0% |
| ! | AGTACATCTGATATGAAATT+TGG | - | chr3_4:39367791-39367810 | Msa0499900:intron | 25.0% |
| !! | AACTTAAAAAGTATGTACTC+AGG | + | chr3_4:39367871-39367890 | None:intergenic | 25.0% |
| ! | AAAGTACATTATACATCCTT+TGG | - | chr3_4:39368056-39368075 | Msa0499900:intron | 25.0% |
| ! | AAAATGACTAAATAAGCAGA+AGG | + | chr3_4:39368091-39368110 | None:intergenic | 25.0% |
| !! | TTTTATACTAGCTGAAGTTA+TGG | - | chr3_4:39368234-39368253 | Msa0499900:intron | 25.0% |
| ! | TTTATACTAGCTGAAGTTAT+GGG | - | chr3_4:39368235-39368254 | Msa0499900:intron | 25.0% |
| ! | ATGAAAAAGAAACATATAGG+TGG | + | chr3_4:39368263-39368282 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAATATTTGGGGG+CGG | - | chr3_4:39368458-39368477 | Msa0499900:intron | 25.0% |
| ! | GTAATAGCAATAAATACAGT+TGG | + | chr3_4:39368555-39368574 | None:intergenic | 25.0% |
| !! | TGTATTTATTGCTATTACAC+AGG | - | chr3_4:39368557-39368576 | Msa0499900:intron | 25.0% |
| !!! | GATATATTTTGTTGATGATG+TGG | - | chr3_4:39368592-39368611 | Msa0499900:intron | 25.0% |
| !!! | TCTATCCATTTAGTTTTTCA+TGG | - | chr3_4:39368688-39368707 | Msa0499900:intron | 25.0% |
| !!! | ATTATTTGTTTCTGAGAGAA+CGG | - | chr3_4:39368779-39368798 | Msa0499900:intron | 25.0% |
| ! | AAAGAGAATTCAAAACAAGT+TGG | + | chr3_4:39368931-39368950 | None:intergenic | 25.0% |
| !! | TAATGAAATTGACTTCTAAC+TGG | + | chr3_4:39369143-39369162 | None:intergenic | 25.0% |
| ! | AAGCTTGAGAATAAGAATAT+CGG | - | chr3_4:39369256-39369275 | Msa0499900:intron | 25.0% |
| ! | AGATATCCAAATGAAACTAA+TGG | + | chr3_4:39369307-39369326 | None:intergenic | 25.0% |
| ! | AGTTTCATTTGGATATCTAA+TGG | - | chr3_4:39369309-39369328 | Msa0499900:intron | 25.0% |
| !!! | ATCAGAAGTTGTCATTTTTA+AGG | - | chr3_4:39369417-39369436 | Msa0499900:intron | 25.0% |
| !!! | ACATGAATTATGTGTTTTAG+AGG | + | chr3_4:39369492-39369511 | None:intergenic | 25.0% |
| ! | ATCAATGCTATTATTTCAGT+TGG | + | chr3_4:39369516-39369535 | None:intergenic | 25.0% |
| !! | TACTTTTACAGTGTAAAAAG+AGG | + | chr3_4:39369586-39369605 | None:intergenic | 25.0% |
| !!! | GTTAAGAAATAGTGGATAAA+TGG | + | chr3_4:39369680-39369699 | None:intergenic | 25.0% |
| !!! | AAAGGTTTTTTCAGGTTTTA+AGG | + | chr3_4:39369749-39369768 | None:intergenic | 25.0% |
| !!! | TGATCTATAAAGGTTTTTTC+AGG | + | chr3_4:39369757-39369776 | None:intergenic | 25.0% |
| ! | AAACCTTTATAGATCATCAA+TGG | - | chr3_4:39369761-39369780 | Msa0499900:intron | 25.0% |
| !! | TAACCATTGATGATCTATAA+AGG | + | chr3_4:39369767-39369786 | None:intergenic | 25.0% |
| ! | GTCTATTCAAATAATCAAAC+AGG | + | chr3_4:39369886-39369905 | None:intergenic | 25.0% |
| !!! | GAAATTTTTGTAGCTACTTT+AGG | + | chr3_4:39370070-39370089 | None:intergenic | 25.0% |
| ! | AAAGACAGAATTTGGTAAAA+CGG | + | chr3_4:39370223-39370242 | None:intergenic | 25.0% |
| ! | AACTGATAAAAGACAGAATT+TGG | + | chr3_4:39370231-39370250 | None:intergenic | 25.0% |
| !! | GAAAAAGTACAAGATCATTA+GGG | + | chr3_4:39370369-39370388 | None:intergenic | 25.0% |
| ! | ATAATATAACCAACTATGGT+TGG | + | chr3_4:39370391-39370410 | None:intergenic | 25.0% |
| ! | TTTGATTGAAAGTAGATTTC+AGG | - | chr3_4:39370428-39370447 | Msa0499900:intron | 25.0% |
| !! | GTCTCATATTCTATATGTTT+TGG | - | chr3_4:39370885-39370904 | Msa0499900:five_prime_UTR | 25.0% |
| ! | ACTGGAAAATATATAACCAA+TGG | - | chr3_4:39370935-39370954 | Msa0499900:five_prime_UTR | 25.0% |
| ! | ACTGATATTCAATATACCAT+TGG | + | chr3_4:39370954-39370973 | None:intergenic | 25.0% |
| ! | TGGTATATTGAATATCAGTT+TGG | - | chr3_4:39370955-39370974 | Msa0499900:five_prime_UTR | 25.0% |
| ! | TAAATGTATCCATGGATATT+AGG | + | chr3_4:39370992-39371011 | None:intergenic | 25.0% |
| ! | AACATACCCAAATTCACTTT+TGG | - | chr3_4:39360674-39360693 | Msa0499900:three_prime_UTR | 30.0% |
| TTCAACACAGAAGACAAAAA+TGG | - | chr3_4:39360804-39360823 | Msa0499900:three_prime_UTR | 30.0% | |
| TTCTAGATGCAGTTATGATT+TGG | - | chr3_4:39360979-39360998 | Msa0499900:CDS | 30.0% | |
| ATGCAGTTATGATCTTTGTT+TGG | - | chr3_4:39361034-39361053 | Msa0499900:intron | 30.0% | |
| TTGTAGATGTTAGATGAAAG+TGG | - | chr3_4:39361069-39361088 | Msa0499900:intron | 30.0% | |
| !!! | GTGGAAGATTTTTAACTTGT+TGG | - | chr3_4:39361088-39361107 | Msa0499900:intron | 30.0% |
| ! | TGATTTGAATCGGTTTATTG+CGG | - | chr3_4:39361144-39361163 | Msa0499900:CDS | 30.0% |
| GAGAATGTTATTGTTTGAGT+GGG | - | chr3_4:39361212-39361231 | Msa0499900:intron | 30.0% | |
| TTGAATGTACTAACATGTGT+CGG | - | chr3_4:39361328-39361347 | Msa0499900:intron | 30.0% | |
| AGTTAGTAGAAGTGATTAAG+AGG | - | chr3_4:39361400-39361419 | Msa0499900:CDS | 30.0% | |
| GTTAGTAGAAGTGATTAAGA+GGG | - | chr3_4:39361401-39361420 | Msa0499900:CDS | 30.0% | |
| TAAGCCTTTGTAAATGTTTG+TGG | - | chr3_4:39361563-39361582 | Msa0499900:intron | 30.0% | |
| CGAATTTGGAAGAACTTATA+TGG | + | chr3_4:39361610-39361629 | None:intergenic | 30.0% | |
| TATAAGTTCTTCCAAATTCG+CGG | - | chr3_4:39361610-39361629 | Msa0499900:intron | 30.0% | |
| ! | TGCAAACATGTAATTTGCAT+TGG | - | chr3_4:39361718-39361737 | Msa0499900:intron | 30.0% |
| ! | GCAAACATGTAATTTGCATT+GGG | - | chr3_4:39361719-39361738 | Msa0499900:intron | 30.0% |
| AATTTGCATTGGGAAATGTT+TGG | - | chr3_4:39361729-39361748 | Msa0499900:intron | 30.0% | |
| GAAGTGCAGTTGTAAAAATT+CGG | + | chr3_4:39361783-39361802 | None:intergenic | 30.0% | |
| ! | TTTTATAGAGTCAGAAACCA+AGG | + | chr3_4:39361853-39361872 | None:intergenic | 30.0% |
| AATGATAAGGTGAACTTCAA+AGG | + | chr3_4:39361904-39361923 | None:intergenic | 30.0% | |
| ! | TTTGAAGTTCACCTTATCAT+TGG | - | chr3_4:39361903-39361922 | Msa0499900:intron | 30.0% |
| TTGAAGTTCACCTTATCATT+GGG | - | chr3_4:39361904-39361923 | Msa0499900:intron | 30.0% | |
| AGAAAATACGCAATACTCTT+CGG | + | chr3_4:39362135-39362154 | None:intergenic | 30.0% | |
| ! | TTCAAGTTCATCCAAACAAA+GGG | + | chr3_4:39362201-39362220 | None:intergenic | 30.0% |
| !! | TTTCAAGTTCATCCAAACAA+AGG | + | chr3_4:39362202-39362221 | None:intergenic | 30.0% |
| GAACTTGAAAATGTTCGTAA+AGG | - | chr3_4:39362212-39362231 | Msa0499900:intron | 30.0% | |
| TTATGTTAGCTGGATATGTT+TGG | + | chr3_4:39362341-39362360 | None:intergenic | 30.0% | |
| TCACAACTAATTATGTTAGC+TGG | + | chr3_4:39362351-39362370 | None:intergenic | 30.0% | |
| TAAAACCACATAATTGAGCT+AGG | + | chr3_4:39362384-39362403 | None:intergenic | 30.0% | |
| !! | TGTTTTCCCCCTTTTAAAAA+TGG | - | chr3_4:39362445-39362464 | Msa0499900:intron | 30.0% |
| !!! | TGTTTGCCATTTTTAAAAGG+GGG | + | chr3_4:39362454-39362473 | None:intergenic | 30.0% |
| GTCCCAATTAGCAAAATTAT+AGG | - | chr3_4:39362611-39362630 | Msa0499900:CDS | 30.0% | |
| ACATTGAAGATGATAAAAGC+TGG | + | chr3_4:39362906-39362925 | None:intergenic | 30.0% | |
| TCATTGTATTGAAGTACATC+AGG | + | chr3_4:39363507-39363526 | None:intergenic | 30.0% | |
| TAATCATTCACTTAAATCGC+AGG | - | chr3_4:39363603-39363622 | Msa0499900:intron | 30.0% | |
| TAATCATTCACTTAAATCGC+AGG | - | chr3_4:39363603-39363622 | Msa0499900:intron | 30.0% | |
| ! | GAAGTGTGTAAAAAGCTTTT+AGG | + | chr3_4:39363778-39363797 | None:intergenic | 30.0% |
| TCATGATAATATTGGCATCA+AGG | + | chr3_4:39363900-39363919 | None:intergenic | 30.0% | |
| GATGAAACAACTAATTTGGT+TGG | - | chr3_4:39363954-39363973 | Msa0499900:intron | 30.0% | |
| TAATAGTTTCCAAGCAAGTA+TGG | - | chr3_4:39363985-39364004 | Msa0499900:intron | 30.0% | |
| AATATGTTGGGATAATCAAC+AGG | + | chr3_4:39364891-39364910 | None:intergenic | 30.0% | |
| ! | CTTTGCCTTTAGAAGTTATA+TGG | - | chr3_4:39364984-39365003 | Msa0499900:intron | 30.0% |
| !! | TGCATTGCTGAATTTTGTTT+TGG | - | chr3_4:39365013-39365032 | Msa0499900:intron | 30.0% |
| TTGTATATGCTATTATGAGC+AGG | - | chr3_4:39365076-39365095 | Msa0499900:intron | 30.0% | |
| ACTATGGTCAACAAAGATAA+TGG | + | chr3_4:39365209-39365228 | None:intergenic | 30.0% | |
| !! | TTCTAAAAGATTAGTTTGGG+TGG | + | chr3_4:39365340-39365359 | None:intergenic | 30.0% |
| !! | CCCAAACTAATCTTTTAGAA+TGG | - | chr3_4:39365340-39365359 | Msa0499900:intron | 30.0% |
| !!! | CATCCATGTTTTGATTTTGT+AGG | + | chr3_4:39365512-39365531 | None:intergenic | 30.0% |
| GAGATTGATGAAAAATCTCA+TGG | - | chr3_4:39365654-39365673 | Msa0499900:intron | 30.0% | |
| ! | AGGTTGAGTTAACGATATTT+TGG | + | chr3_4:39366230-39366249 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr3_4:39366531-39366550 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr3_4:39366532-39366551 | Msa0499900:intron | 30.0% |
| GTAATGTGCTGAGTATTAAT+TGG | - | chr3_4:39366662-39366681 | Msa0499900:intron | 30.0% | |
| ! | TATATGTTTTGTCAGCTACT+AGG | - | chr3_4:39366804-39366823 | Msa0499900:intron | 30.0% |
| ACTTGTGATCATAACAAGTA+GGG | - | chr3_4:39367065-39367084 | Msa0499900:intron | 30.0% | |
| TAAGGAAGATGTATTGTATC+CGG | - | chr3_4:39367308-39367327 | Msa0499900:intron | 30.0% | |
| CTATAAGCACAATTGTAATC+CGG | + | chr3_4:39367330-39367349 | None:intergenic | 30.0% | |
| ! | ATCTACACCTTTTATAAAGG+TGG | + | chr3_4:39367661-39367680 | None:intergenic | 30.0% |
| ! | TGCATCTACACCTTTTATAA+AGG | + | chr3_4:39367664-39367683 | None:intergenic | 30.0% |
| GATAATAACAACTCTGAATG+TGG | - | chr3_4:39367690-39367709 | Msa0499900:intron | 30.0% | |
| TTGATGTTTGCATGTCAAAT+TGG | - | chr3_4:39367750-39367769 | Msa0499900:intron | 30.0% | |
| ATCTGATATGAAATTTGGAG+AGG | - | chr3_4:39367796-39367815 | Msa0499900:intron | 30.0% | |
| CAAAATCAACAAATCACATG+AGG | + | chr3_4:39367840-39367859 | None:intergenic | 30.0% | |
| GGATGTATAATGTACTTTAC+AGG | + | chr3_4:39368054-39368073 | None:intergenic | 30.0% | |
| TTTCTTACCTACATAAGCTA+GGG | + | chr3_4:39368196-39368215 | None:intergenic | 30.0% | |
| ! | TTTTCTTACCTACATAAGCT+AGG | + | chr3_4:39368197-39368216 | None:intergenic | 30.0% |
| ! | TTGATGCTATTAGGTTTTCA+TGG | - | chr3_4:39368393-39368412 | Msa0499900:intron | 30.0% |
| TAAAAAACCATGGTTACTTG+TGG | - | chr3_4:39368486-39368505 | Msa0499900:intron | 30.0% | |
| TGGAAACTTTGTATCTTGTT+TGG | - | chr3_4:39368506-39368525 | Msa0499900:intron | 30.0% | |
| AACTAAATGGATAGAAAGAG+TGG | + | chr3_4:39368683-39368702 | None:intergenic | 30.0% | |
| GAAGACCATGAAAAACTAAA+TGG | + | chr3_4:39368696-39368715 | None:intergenic | 30.0% | |
| !!! | TTACTGATATTTTCTGGAAC+TGG | - | chr3_4:39368728-39368747 | Msa0499900:intron | 30.0% |
| TTCAGATACTTGTCTTTCTA+AGG | - | chr3_4:39368875-39368894 | Msa0499900:intron | 30.0% | |
| !! | ATACTTGTCTTTCTAAGGTT+TGG | - | chr3_4:39368880-39368899 | Msa0499900:intron | 30.0% |
| !!! | TTGTTTTGAATTCTCTTTCC+AGG | - | chr3_4:39368933-39368952 | Msa0499900:intron | 30.0% |
| ! | TGGAAGAGAAGTTAGTATTT+TGG | - | chr3_4:39368956-39368975 | Msa0499900:intron | 30.0% |
| GGAAAAAACACAACAAAAGA+AGG | + | chr3_4:39368997-39369016 | None:intergenic | 30.0% | |
| !!! | TTTGTTGTGTTTTTTCCTCT+AGG | - | chr3_4:39369000-39369019 | Msa0499900:intron | 30.0% |
| !!! | TTGTTGTGTTTTTTCCTCTA+GGG | - | chr3_4:39369001-39369020 | Msa0499900:intron | 30.0% |
| ACAGGTAAACTACATTTCTT+AGG | - | chr3_4:39369082-39369101 | Msa0499900:intron | 30.0% | |
| CTAATGTGAGAAAATTGAAG+AGG | - | chr3_4:39369176-39369195 | Msa0499900:intron | 30.0% | |
| AGCTTGAGAATAAGAATATC+GGG | - | chr3_4:39369257-39369276 | Msa0499900:intron | 30.0% | |
| !! | GCATTGATTGTAGTTGTATT+AGG | - | chr3_4:39369528-39369547 | Msa0499900:intron | 30.0% |
| TTAGGTCAAACTAGTGAAAT+CGG | - | chr3_4:39369546-39369565 | Msa0499900:intron | 30.0% | |
| ATGGTCTTCATTACATTATG+AGG | + | chr3_4:39369661-39369680 | None:intergenic | 30.0% | |
| ! | ATCCACTATTTCTTAACTTC+AGG | - | chr3_4:39369683-39369702 | Msa0499900:intron | 30.0% |
| !! | GGTTATAATATTTGGTTCTG+CGG | - | chr3_4:39369782-39369801 | Msa0499900:intron | 30.0% |
| AACTCGTATAAACTAAGCTT+TGG | + | chr3_4:39370129-39370148 | None:intergenic | 30.0% | |
| ! | GGAAAAAGTACAAGATCATT+AGG | + | chr3_4:39370370-39370389 | None:intergenic | 30.0% |
| ! | ATTTTATTCCTTGCCAGTTT+CGG | - | chr3_4:39370612-39370631 | Msa0499900:intron | 30.0% |
| GTCGCATTGTAGATTTAATT+TGG | - | chr3_4:39370765-39370784 | Msa0499900:intron | 30.0% | |
| !! | GTAGATTTAATTTGGTTGTG+AGG | - | chr3_4:39370773-39370792 | Msa0499900:intron | 30.0% |
| ! | TTAATTTGGTTGTGAGGAAT+TGG | - | chr3_4:39370779-39370798 | Msa0499900:intron | 30.0% |
| AATTTCATGCAATGAATCAC+TGG | - | chr3_4:39370917-39370936 | Msa0499900:five_prime_UTR | 30.0% | |
| TTAAGGGAATTGAATATGAG+AGG | + | chr3_4:39371018-39371037 | None:intergenic | 30.0% | |
| ! | ATGTTATTGCGATGTCACTT+CGG | + | chr3_4:39360659-39360678 | None:intergenic | 35.0% |
| GAGAGACCAAAAGTGAATTT+GGG | + | chr3_4:39360683-39360702 | None:intergenic | 35.0% | |
| AGAGAGACCAAAAGTGAATT+TGG | + | chr3_4:39360684-39360703 | None:intergenic | 35.0% | |
| AACACAGAAGACAAAAATGG+CGG | - | chr3_4:39360807-39360826 | Msa0499900:three_prime_UTR | 35.0% | |
| AGAGTGGTTACTAGATTGAT+CGG | + | chr3_4:39360884-39360903 | None:intergenic | 35.0% | |
| AAAAGGAAAGAAGAGAAGAG+TGG | + | chr3_4:39360900-39360919 | None:intergenic | 35.0% | |
| TTCGTGTGTGTGATTTGAAT+CGG | - | chr3_4:39361134-39361153 | Msa0499900:CDS | 35.0% | |
| GGAGAATGTTATTGTTTGAG+TGG | - | chr3_4:39361211-39361230 | Msa0499900:intron | 35.0% | |
| TGTATTACTCACATAGACAC+CGG | - | chr3_4:39361248-39361267 | Msa0499900:intron | 35.0% | |
| !! | GAAGTGATTAAGAGGGTATT+TGG | - | chr3_4:39361408-39361427 | Msa0499900:CDS | 35.0% |
| ACTACTAGATTAGAGCTCAT+AGG | - | chr3_4:39361435-39361454 | Msa0499900:intron | 35.0% | |
| CTACTAGATTAGAGCTCATA+GGG | - | chr3_4:39361436-39361455 | Msa0499900:intron | 35.0% | |
| ACCTCCACAAACATTTACAA+AGG | + | chr3_4:39361570-39361589 | None:intergenic | 35.0% | |
| ATAAGTTCTTCCAAATTCGC+GGG | - | chr3_4:39361611-39361630 | Msa0499900:intron | 35.0% | |
| TGGGAAATGTTTGGATGAAA+AGG | - | chr3_4:39361738-39361757 | Msa0499900:intron | 35.0% | |
| GGGAAATGTTTGGATGAAAA+GGG | - | chr3_4:39361739-39361758 | Msa0499900:intron | 35.0% | |
| GGAAATGTTTGGATGAAAAG+GGG | - | chr3_4:39361740-39361759 | Msa0499900:intron | 35.0% | |
| ! | AATCTGTAACAGTGGTAATG+AGG | - | chr3_4:39361874-39361893 | Msa0499900:intron | 35.0% |
| GTTATTCCTTCCCAATGATA+AGG | + | chr3_4:39361917-39361936 | None:intergenic | 35.0% | |
| ATACTCTTCGGTACAAGAAT+AGG | + | chr3_4:39362123-39362142 | None:intergenic | 35.0% | |
| TAGGTTTCTTTCCCTTTGTT+TGG | - | chr3_4:39362187-39362206 | Msa0499900:intron | 35.0% | |
| AAAAGCCTAGCTCAATTATG+TGG | - | chr3_4:39362376-39362395 | Msa0499900:intron | 35.0% | |
| TTTAAAAGGGGGAAAACATG+CGG | + | chr3_4:39362443-39362462 | None:intergenic | 35.0% | |
| !! | TTGTTGCTTTATGACCGAAT+TGG | - | chr3_4:39362691-39362710 | Msa0499900:intron | 35.0% |
| GAAAGAGATGTGTGGTAAAT+TGG | + | chr3_4:39362935-39362954 | None:intergenic | 35.0% | |
| TGAAGTTCACATCTGTAGAT+TGG | - | chr3_4:39363013-39363032 | Msa0499900:intron | 35.0% | |
| ! | TAGATTGGTCGAAGACAAAT+GGG | - | chr3_4:39363028-39363047 | Msa0499900:CDS | 35.0% |
| ! | AAAGGTGCATGTTCTTCAAA+AGG | - | chr3_4:39363052-39363071 | Msa0499900:CDS | 35.0% |
| AATAACAGTGTGGACATGTT+AGG | - | chr3_4:39363184-39363203 | Msa0499900:intron | 35.0% | |
| AAGTTTGTGACGACACAAAA+AGG | - | chr3_4:39363349-39363368 | Msa0499900:intron | 35.0% | |
| TGTTATCTCTCACACCATAA+AGG | + | chr3_4:39363474-39363493 | None:intergenic | 35.0% | |
| CTTCAATACAATGAACTGAG+CGG | - | chr3_4:39363513-39363532 | Msa0499900:CDS | 35.0% | |
| ! | AAAGCTTTTTACACACTTCC+TGG | - | chr3_4:39363779-39363798 | Msa0499900:intron | 35.0% |
| CTCAGATTGCGGTATATATA+CGG | + | chr3_4:39363820-39363839 | None:intergenic | 35.0% | |
| AATCCTATTCACTCAGATTG+CGG | + | chr3_4:39363831-39363850 | None:intergenic | 35.0% | |
| TCTGAGTGAATAGGATTGAA+AGG | - | chr3_4:39363834-39363853 | Msa0499900:intron | 35.0% | |
| AAGGTTGTCAAAATCGTAAC+TGG | + | chr3_4:39363881-39363900 | None:intergenic | 35.0% | |
| AAGACTGTCAAAATGGCAAT+CGG | + | chr3_4:39364026-39364045 | None:intergenic | 35.0% | |
| GTGTATGAAGACTGTCAAAA+TGG | + | chr3_4:39364033-39364052 | None:intergenic | 35.0% | |
| ! | TTTCTTTTACCAGCATGATC+AGG | - | chr3_4:39364168-39364187 | Msa0499900:intron | 35.0% |
| AGCATGATCAGGTAATATCT+GGG | - | chr3_4:39364179-39364198 | Msa0499900:intron | 35.0% | |
| TCCAATGTTCAAAATCACAC+AGG | + | chr3_4:39364268-39364287 | None:intergenic | 35.0% | |
| ! | GTTTTCTTGCTAGATATGTC+TGG | - | chr3_4:39364372-39364391 | Msa0499900:intron | 35.0% |
| ! | TACCAACTCTTGTTATCCTT+AGG | - | chr3_4:39364417-39364436 | Msa0499900:intron | 35.0% |
| ! | GGAATGTGTTTCATACCTTT+TGG | + | chr3_4:39364476-39364495 | None:intergenic | 35.0% |
| CTTTCAACTCTTAGATGACT+TGG | + | chr3_4:39364553-39364572 | None:intergenic | 35.0% | |
| CCACTAAGTTTAATCCAACA+GGG | + | chr3_4:39364617-39364636 | None:intergenic | 35.0% | |
| TCCACTAAGTTTAATCCAAC+AGG | + | chr3_4:39364618-39364637 | None:intergenic | 35.0% | |
| ! | AACTTAGTGGATGTGATTGA+AGG | - | chr3_4:39364627-39364646 | Msa0499900:intron | 35.0% |
| ! | AGCCAAAGTCTTTTATGTCT+TGG | - | chr3_4:39364725-39364744 | Msa0499900:intron | 35.0% |
| ! | GCCAAAGTCTTTTATGTCTT+GGG | - | chr3_4:39364726-39364745 | Msa0499900:intron | 35.0% |
| ACCCAAGACATAAAAGACTT+TGG | + | chr3_4:39364730-39364749 | None:intergenic | 35.0% | |
| ATTATGAGCAGGAAAACAAC+TGG | - | chr3_4:39365087-39365106 | Msa0499900:intron | 35.0% | |
| ! | AACTTGGTGAATGAAGTGTT+AGG | + | chr3_4:39365126-39365145 | None:intergenic | 35.0% |
| TTTCAGGGTGCAAATAAACT+TGG | + | chr3_4:39365142-39365161 | None:intergenic | 35.0% | |
| TTTGCACCCTGAAAATATGA+TGG | - | chr3_4:39365148-39365167 | Msa0499900:intron | 35.0% | |
| ! | TAGTTTTTGTGTTTGCACTC+TGG | - | chr3_4:39365178-39365197 | Msa0499900:intron | 35.0% |
| ! | ATGGTCAACAAAGATAATGG+TGG | + | chr3_4:39365206-39365225 | None:intergenic | 35.0% |
| ACAGTCAAGACTCAAAACTA+TGG | + | chr3_4:39365225-39365244 | None:intergenic | 35.0% | |
| GTGACTAGAATTCAACTTTG+AGG | - | chr3_4:39365479-39365498 | Msa0499900:intron | 35.0% | |
| TTGTGATCTTGTTGAGAATG+TGG | - | chr3_4:39365612-39365631 | Msa0499900:intron | 35.0% | |
| CTATCAATTTCTCTTCGCAA+TGG | + | chr3_4:39365681-39365700 | None:intergenic | 35.0% | |
| CACGAACATGAAATGAACAA+AGG | + | chr3_4:39365850-39365869 | None:intergenic | 35.0% | |
| ATTTATATTACCTCTGCAGG+TGG | - | chr3_4:39366334-39366353 | Msa0499900:intron | 35.0% | |
| TTTATATTACCTCTGCAGGT+GGG | - | chr3_4:39366335-39366354 | Msa0499900:intron | 35.0% | |
| GCAAGAATACCAACATTATC+GGG | + | chr3_4:39366417-39366436 | None:intergenic | 35.0% | |
| CGCAAGAATACCAACATTAT+CGG | + | chr3_4:39366418-39366437 | None:intergenic | 35.0% | |
| ATGTGCTGAGTATTAATTGG+AGG | - | chr3_4:39366665-39366684 | Msa0499900:intron | 35.0% | |
| TGTGCTGAGTATTAATTGGA+GGG | - | chr3_4:39366666-39366685 | Msa0499900:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr3_4:39366730-39366749 | Msa0499900:intron | 35.0% |
| CACTTGTGATCATAACAAGT+AGG | - | chr3_4:39367064-39367083 | Msa0499900:intron | 35.0% | |
| GTTCAAAGTCGAATTGGTTA+CGG | - | chr3_4:39367175-39367194 | Msa0499900:intron | 35.0% | |
| TATGTAACTATCCGTGTCTT+TGG | + | chr3_4:39367203-39367222 | None:intergenic | 35.0% | |
| CAGTCAAAAGAAAAACAACG+TGG | + | chr3_4:39367589-39367608 | None:intergenic | 35.0% | |
| AGAAAATTCTCTCCTCTTAC+TGG | - | chr3_4:39368211-39368230 | Msa0499900:intron | 35.0% | |
| GCTAGTATAAAACCAGTAAG+AGG | + | chr3_4:39368226-39368245 | None:intergenic | 35.0% | |
| AGATGACAACTAAACCTCAA+TGG | + | chr3_4:39368333-39368352 | None:intergenic | 35.0% | |
| AAAGTTTCCACAAGTAACCA+TGG | + | chr3_4:39368496-39368515 | None:intergenic | 35.0% | |
| ! | TATCTTGTTTGGTCTGTTTG+TGG | - | chr3_4:39368517-39368536 | Msa0499900:intron | 35.0% |
| !! | TCTGTTTGTGGTTTTACTTG+TGG | - | chr3_4:39368529-39368548 | Msa0499900:intron | 35.0% |
| !!! | TCACTGTATGACTTGTTTTC+AGG | - | chr3_4:39368755-39368774 | Msa0499900:intron | 35.0% |
| ! | TTTTGAATTCTCTTTCCAGG+TGG | - | chr3_4:39368936-39368955 | Msa0499900:intron | 35.0% |
| !!! | TGTTGTGTTTTTTCCTCTAG+GGG | - | chr3_4:39369002-39369021 | Msa0499900:intron | 35.0% |
| GTATCATCTGGATCAAGATA+TGG | - | chr3_4:39369056-39369075 | Msa0499900:intron | 35.0% | |
| TGAGAAAATTGAAGAGGTTG+TGG | - | chr3_4:39369182-39369201 | Msa0499900:intron | 35.0% | |
| ! | GCTTAAATTAGTCTCATGCT+AGG | + | chr3_4:39369240-39369259 | None:intergenic | 35.0% |
| TCTCTGTTTGCAAAAGTAAC+AGG | + | chr3_4:39369384-39369403 | None:intergenic | 35.0% | |
| CTCCTGAAGTTAAGAAATAG+TGG | + | chr3_4:39369688-39369707 | None:intergenic | 35.0% | |
| TGTGCTTAGCCATAAAAGAA+AGG | + | chr3_4:39369846-39369865 | None:intergenic | 35.0% | |
| ! | TCTTTTATGGCTAAGCACAT+TGG | - | chr3_4:39369847-39369866 | Msa0499900:intron | 35.0% |
| !! | TATCAGTTCTCTGAAGCATT+TGG | - | chr3_4:39370243-39370262 | Msa0499900:intron | 35.0% |
| !! | ATCAGTTCTCTGAAGCATTT+GGG | - | chr3_4:39370244-39370263 | Msa0499900:intron | 35.0% |
| !! | GAAGCATTTGGGAAGTTTTA+TGG | - | chr3_4:39370255-39370274 | Msa0499900:intron | 35.0% |
| ! | TTTTATGGCCAATCCAAGTA+TGG | - | chr3_4:39370270-39370289 | Msa0499900:intron | 35.0% |
| GTTGAAACTTCAAAAACACG+TGG | - | chr3_4:39370309-39370328 | Msa0499900:intron | 35.0% | |
| !!! | GTACTTTTTCCAACCATAGT+TGG | - | chr3_4:39370379-39370398 | Msa0499900:intron | 35.0% |
| !!! | GTGACTGATGTGTTTTTTTC+CGG | - | chr3_4:39370476-39370495 | Msa0499900:intron | 35.0% |
| ! | TGTAGTTCTATCATACCTCT+TGG | - | chr3_4:39370501-39370520 | Msa0499900:intron | 35.0% |
| AACTGGCAAGGAATAAAATC+AGG | + | chr3_4:39370611-39370630 | None:intergenic | 35.0% | |
| AAGAATTGCTGTATGGGATT+TGG | - | chr3_4:39370684-39370703 | Msa0499900:intron | 35.0% | |
| ATGAGACTATGTCATCATAC+AGG | + | chr3_4:39370872-39370891 | None:intergenic | 35.0% | |
| CATTTACAGCCTAATATCCA+TGG | - | chr3_4:39370980-39370999 | Msa0499900:five_prime_UTR | 35.0% | |
| !!! | TGTCACTTCGGTGTTCATTT+TGG | + | chr3_4:39360647-39360666 | None:intergenic | 40.0% |
| ! | ATCTGATGAACAAGGTTGGT+TGG | + | chr3_4:39360770-39360789 | None:intergenic | 40.0% |
| TGAGATCTGATGAACAAGGT+TGG | + | chr3_4:39360774-39360793 | None:intergenic | 40.0% | |
| GTCTTCTGTGTTGAAACCAA+CGG | + | chr3_4:39360799-39360818 | None:intergenic | 40.0% | |
| GAGTGGTTACTAGATTGATC+GGG | + | chr3_4:39360883-39360902 | None:intergenic | 40.0% | |
| GTCAGTTTCAGTATCATGTC+CGG | + | chr3_4:39361270-39361289 | None:intergenic | 40.0% | |
| GCCTTTGTAAATGTTTGTGG+AGG | - | chr3_4:39361566-39361585 | Msa0499900:intron | 40.0% | |
| ATCTTAGATTCCCGCGAATT+TGG | + | chr3_4:39361624-39361643 | None:intergenic | 40.0% | |
| AATGTTTGGATGAAAAGGGG+AGG | - | chr3_4:39361743-39361762 | Msa0499900:intron | 40.0% | |
| ATGTTTGGATGAAAAGGGGA+GGG | - | chr3_4:39361744-39361763 | Msa0499900:intron | 40.0% | |
| TTTCCCTCCTATTGTAGACA+GGG | - | chr3_4:39361815-39361834 | Msa0499900:intron | 40.0% | |
| AGTTCACCTTATCATTGGGA+AGG | - | chr3_4:39361908-39361927 | Msa0499900:intron | 40.0% | |
| TACAAGAATAGGTACATGGC+AGG | + | chr3_4:39362112-39362131 | None:intergenic | 40.0% | |
| TCGGTACAAGAATAGGTACA+TGG | + | chr3_4:39362116-39362135 | None:intergenic | 40.0% | |
| !! | TGTTCGTAAAGGCGTAGTTT+TGG | - | chr3_4:39362223-39362242 | Msa0499900:intron | 40.0% |
| TGGAGGAAATTGCAGTAGAA+AGG | + | chr3_4:39362317-39362336 | None:intergenic | 40.0% | |
| GTTAGCTGGATATGTTTGGA+TGG | + | chr3_4:39362337-39362356 | None:intergenic | 40.0% | |
| CATCACTAAGGGTCACTATT+TGG | + | chr3_4:39362493-39362512 | None:intergenic | 40.0% | |
| TTATGACCGAATTGGAGACT+TGG | - | chr3_4:39362699-39362718 | Msa0499900:intron | 40.0% | |
| TTTACAAAGACTACGTGTGG+AGG | + | chr3_4:39362725-39362744 | None:intergenic | 40.0% | |
| TCCACACGTAGTCTTTGTAA+AGG | - | chr3_4:39362724-39362743 | Msa0499900:intron | 40.0% | |
| TCCTTTACAAAGACTACGTG+TGG | + | chr3_4:39362728-39362747 | None:intergenic | 40.0% | |
| ! | ATAGTTACCTCCTTTTGCAG+TGG | - | chr3_4:39362968-39362987 | Msa0499900:intron | 40.0% |
| ! | GTAGATTGGTCGAAGACAAA+TGG | - | chr3_4:39363027-39363046 | Msa0499900:CDS | 40.0% |
| ! | TTCTTCAAAAGGTACACTGC+TGG | - | chr3_4:39363063-39363082 | Msa0499900:CDS | 40.0% |
| TTCTAGATGTGAGCACAGTT+AGG | - | chr3_4:39363134-39363153 | Msa0499900:intron | 40.0% | |
| TCTAGATGTGAGCACAGTTA+GGG | - | chr3_4:39363135-39363154 | Msa0499900:intron | 40.0% | |
| !! | TCGAAGTACTGAGCAAAACT+GGG | - | chr3_4:39363391-39363410 | Msa0499900:intron | 40.0% |
| AGAGACTATAGTTGAGTGAG+AGG | - | chr3_4:39363553-39363572 | Msa0499900:intron | 40.0% | |
| GAGACTATAGTTGAGTGAGA+GGG | - | chr3_4:39363554-39363573 | Msa0499900:intron | 40.0% | |
| ! | GTATATATACGGATTGAGGG+GGG | + | chr3_4:39363809-39363828 | None:intergenic | 40.0% |
| ! | GGTATATATACGGATTGAGG+GGG | + | chr3_4:39363810-39363829 | None:intergenic | 40.0% |
| ! | CGGTATATATACGGATTGAG+GGG | + | chr3_4:39363811-39363830 | None:intergenic | 40.0% |
| ! | GCGGTATATATACGGATTGA+GGG | + | chr3_4:39363812-39363831 | None:intergenic | 40.0% |
| ! | TGCGGTATATATACGGATTG+AGG | + | chr3_4:39363813-39363832 | None:intergenic | 40.0% |
| ATACCGCAATCTGAGTGAAT+AGG | - | chr3_4:39363825-39363844 | Msa0499900:intron | 40.0% | |
| CAACGAATTCCATACTTGCT+TGG | + | chr3_4:39363997-39364016 | None:intergenic | 40.0% | |
| CAAGCAAGTATGGAATTCGT+TGG | - | chr3_4:39363995-39364014 | Msa0499900:intron | 40.0% | |
| CAGATATTACCTGATCATGC+TGG | + | chr3_4:39364180-39364199 | None:intergenic | 40.0% | |
| CAGCATGATCAGGTAATATC+TGG | - | chr3_4:39364178-39364197 | Msa0499900:intron | 40.0% | |
| ! | AGGTAATATCTGGGATAGAC+TGG | - | chr3_4:39364188-39364207 | Msa0499900:intron | 40.0% |
| ! | GCCTGTGTGATTTTGAACAT+TGG | - | chr3_4:39364264-39364283 | Msa0499900:intron | 40.0% |
| ! | ACATTGGACTTTTCACCCTT+TGG | - | chr3_4:39364280-39364299 | Msa0499900:intron | 40.0% |
| ! | AGATATGTCTGGAACCTTGA+AGG | - | chr3_4:39364383-39364402 | Msa0499900:intron | 40.0% |
| GAACCTTGAAGGATCAGAAT+GGG | - | chr3_4:39364394-39364413 | Msa0499900:intron | 40.0% | |
| AGCCTAAGGATAACAAGAGT+TGG | + | chr3_4:39364422-39364441 | None:intergenic | 40.0% | |
| ATTGAACACAAAGAGCAGCA+CGG | + | chr3_4:39364448-39364467 | None:intergenic | 40.0% | |
| TGTGTTCAATGGAGTCCAAA+AGG | - | chr3_4:39364458-39364477 | Msa0499900:intron | 40.0% | |
| TAGAAGGTCGGAACAAAACT+GGG | + | chr3_4:39364504-39364523 | None:intergenic | 40.0% | |
| CCCTGTTGGATTAAACTTAG+TGG | - | chr3_4:39364614-39364633 | Msa0499900:intron | 40.0% | |
| ACAACGGCTTAACTAGAGTT+AGG | + | chr3_4:39364662-39364681 | None:intergenic | 40.0% | |
| !! | AGGGTAGTAATGGGCAAAAT+TGG | + | chr3_4:39364800-39364819 | None:intergenic | 40.0% |
| ! | AATTTTGCCCATTACTACCC+TGG | - | chr3_4:39364799-39364818 | Msa0499900:intron | 40.0% |
| GCAGAAAACAAGTTTGCAGT+GGG | - | chr3_4:39365035-39365054 | Msa0499900:intron | 40.0% | |
| ! | GCACAGCCATCATATTTTCA+GGG | + | chr3_4:39365157-39365176 | None:intergenic | 40.0% |
| TATGATTTATGACAGGCCCA+TGG | - | chr3_4:39366059-39366078 | Msa0499900:intron | 40.0% | |
| ATGATTTATGACAGGCCCAT+GGG | - | chr3_4:39366060-39366079 | Msa0499900:intron | 40.0% | |
| ACTGCTTTGATGAGCAGTTT+GGG | - | chr3_4:39366203-39366222 | Msa0499900:intron | 40.0% | |
| !! | TATCAACTAGAGGTGTCTGT+GGG | + | chr3_4:39366255-39366274 | None:intergenic | 40.0% |
| !! | ATATCAACTAGAGGTGTCTG+TGG | + | chr3_4:39366256-39366275 | None:intergenic | 40.0% |
| CTTCAGTGACAAGTGTTTCA+TGG | - | chr3_4:39366388-39366407 | Msa0499900:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_4:39366771-39366790 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3_4:39366771-39366790 | Msa0499900:intron | 40.0% |
| GTGATCATAACAAGTAGGGA+TGG | - | chr3_4:39367069-39367088 | Msa0499900:intron | 40.0% | |
| AGCTTGATGTTGTGAACACA+TGG | + | chr3_4:39367127-39367146 | None:intergenic | 40.0% | |
| TTTGCATGTCAAATTGGCAC+AGG | - | chr3_4:39367756-39367775 | Msa0499900:intron | 40.0% | |
| TTGCATGTCAAATTGGCACA+GGG | - | chr3_4:39367757-39367776 | Msa0499900:intron | 40.0% | |
| TGCATCAGTCTTCAAACAGT+GGG | + | chr3_4:39367911-39367930 | None:intergenic | 40.0% | |
| TTGCATCAGTCTTCAAACAG+TGG | + | chr3_4:39367912-39367931 | None:intergenic | 40.0% | |
| AGCTTGATCTCTCATCATCT+TGG | - | chr3_4:39368136-39368155 | Msa0499900:intron | 40.0% | |
| CTCTCATCATCTTGGACATT+CGG | - | chr3_4:39368144-39368163 | Msa0499900:intron | 40.0% | |
| CTTGATGTGAGTTTCCATTG+AGG | - | chr3_4:39368316-39368335 | Msa0499900:intron | 40.0% | |
| ! | GGCGGATTCTTAAAAAACCA+TGG | - | chr3_4:39368476-39368495 | Msa0499900:intron | 40.0% |
| !!! | CTGATATTTTCTGGAACTGG+TGG | - | chr3_4:39368731-39368750 | Msa0499900:intron | 40.0% |
| ! | GTTTCTGAGAGAACGGTAAT+AGG | - | chr3_4:39368786-39368805 | Msa0499900:intron | 40.0% |
| GGGATATGATTGTAACCCAA+TGG | - | chr3_4:39368812-39368831 | Msa0499900:intron | 40.0% | |
| CATCTGCAGCAAAAACCATT+GGG | + | chr3_4:39368830-39368849 | None:intergenic | 40.0% | |
| TCATCTGCAGCAAAAACCAT+TGG | + | chr3_4:39368831-39368850 | None:intergenic | 40.0% | |
| ! | GTTTTTGCTGCAGATGAAAG+AGG | - | chr3_4:39368834-39368853 | Msa0499900:intron | 40.0% |
| ATACTAACTTCTCTTCCACC+TGG | + | chr3_4:39368954-39368973 | None:intergenic | 40.0% | |
| GAAAAAAACAGTCAGCTCGA+GGG | - | chr3_4:39369279-39369298 | Msa0499900:intron | 40.0% | |
| AAAAAAACAGTCAGCTCGAG+GGG | - | chr3_4:39369280-39369299 | Msa0499900:intron | 40.0% | |
| ! | CTTTTGCAAACAGAGATGCA+TGG | - | chr3_4:39369388-39369407 | Msa0499900:intron | 40.0% |
| ATGAGGAAGCTAGCATATGT+AGG | + | chr3_4:39369644-39369663 | None:intergenic | 40.0% | |
| AGTTGAGGTTTAGCATTGTC+TGG | - | chr3_4:39369723-39369742 | Msa0499900:intron | 40.0% | |
| ! | TTCCTCGTGCCTTTCTTTTA+TGG | - | chr3_4:39369834-39369853 | Msa0499900:intron | 40.0% |
| GGTATGATAGAACTACAAGC+CGG | + | chr3_4:39370498-39370517 | None:intergenic | 40.0% | |
| !! | GTTTTAGCACATCAGGTTAG+TGG | - | chr3_4:39370547-39370566 | Msa0499900:intron | 40.0% |
| TGATACTTCCCTGAAACTAC+AGG | - | chr3_4:39370652-39370671 | Msa0499900:intron | 40.0% | |
| CATCCAATCCTGTAGTTTCA+GGG | + | chr3_4:39370663-39370682 | None:intergenic | 40.0% | |
| TGGATGGAAGAATTGCTGTA+TGG | - | chr3_4:39370677-39370696 | Msa0499900:intron | 40.0% | |
| GGATGGAAGAATTGCTGTAT+GGG | - | chr3_4:39370678-39370697 | Msa0499900:intron | 40.0% | |
| ATGGGATTTGGAAAATGAGC+AGG | - | chr3_4:39370696-39370715 | Msa0499900:intron | 40.0% | |
| AGAGGCTGTAAATGTATCCA+TGG | + | chr3_4:39371000-39371019 | None:intergenic | 40.0% | |
| ! | AACAAGGTTGGTTGGTTGGT+TGG | + | chr3_4:39360762-39360781 | None:intergenic | 45.0% |
| ! | GATGAACAAGGTTGGTTGGT+TGG | + | chr3_4:39360766-39360785 | None:intergenic | 45.0% |
| GGAGTGAGATCTGATGAACA+AGG | + | chr3_4:39360778-39360797 | None:intergenic | 45.0% | |
| TTCATCAGATCTCACTCCGT+TGG | - | chr3_4:39360780-39360799 | Msa0499900:three_prime_UTR | 45.0% | |
| AATGCATCACTTGTCACGCT+TGG | - | chr3_4:39360854-39360873 | Msa0499900:three_prime_UTR | 45.0% | |
| !! | AACATGTGTCGGTGTTGTGT+TGG | - | chr3_4:39361339-39361358 | Msa0499900:CDS | 45.0% |
| TCAGATGCACCTTTGATCAG+AGG | - | chr3_4:39361365-39361384 | Msa0499900:CDS | 45.0% | |
| GAAGAACCTGAGTGACAGAA+AGG | - | chr3_4:39361649-39361668 | Msa0499900:intron | 45.0% | |
| CAGAAAGGAGCTAGAAGTTG+TGG | - | chr3_4:39361664-39361683 | Msa0499900:intron | 45.0% | |
| ! | TCTGGAGTGAAGCAATGTGT+AGG | - | chr3_4:39361688-39361707 | Msa0499900:intron | 45.0% |
| CTTTCCCTCCTATTGTAGAC+AGG | - | chr3_4:39361814-39361833 | Msa0499900:intron | 45.0% | |
| TTCCCTCCTATTGTAGACAG+GGG | - | chr3_4:39361816-39361835 | Msa0499900:intron | 45.0% | |
| TCTTCTCCCCTGTCTACAAT+AGG | + | chr3_4:39361825-39361844 | None:intergenic | 45.0% | |
| TGTAGACAGGGGAGAAGAAA+AGG | - | chr3_4:39361827-39361846 | Msa0499900:intron | 45.0% | |
| AGCTGGATATGTTTGGATGG+AGG | + | chr3_4:39362334-39362353 | None:intergenic | 45.0% | |
| ! | AGGAAAAGCGCATCTTAGTG+TGG | - | chr3_4:39362744-39362763 | Msa0499900:intron | 45.0% |
| CAAAATGCGACCACTGCAAA+AGG | + | chr3_4:39362981-39363000 | None:intergenic | 45.0% | |
| GGTCGAAGACAAATGGGAAA+AGG | - | chr3_4:39363034-39363053 | Msa0499900:CDS | 45.0% | |
| CTAGATGTGAGCACAGTTAG+GGG | - | chr3_4:39363136-39363155 | Msa0499900:intron | 45.0% | |
| !! | GTCGAAGTACTGAGCAAAAC+TGG | - | chr3_4:39363390-39363409 | Msa0499900:intron | 45.0% |
| GAGTGAGAGGGAAAGATACT+CGG | - | chr3_4:39363566-39363585 | Msa0499900:intron | 45.0% | |
| TAGTTACTTCATCCCACGAC+CGG | - | chr3_4:39364230-39364249 | Msa0499900:intron | 45.0% | |
| ! | GACTTTTCACCCTTTGGTCT+GGG | - | chr3_4:39364286-39364305 | Msa0499900:intron | 45.0% |
| GGAACCTTGAAGGATCAGAA+TGG | - | chr3_4:39364393-39364412 | Msa0499900:intron | 45.0% | |
| GTACCCATTCTGATCCTTCA+AGG | + | chr3_4:39364400-39364419 | None:intergenic | 45.0% | |
| ! | GTGCTGCTCTTTGTGTTCAA+TGG | - | chr3_4:39364447-39364466 | Msa0499900:intron | 45.0% |
| TCGGAACAAAACTGGGACAT+GGG | + | chr3_4:39364497-39364516 | None:intergenic | 45.0% | |
| CTAGAAGGTCGGAACAAAAC+TGG | + | chr3_4:39364505-39364524 | None:intergenic | 45.0% | |
| AATCCAACAGGGACAAGAGT+GGG | + | chr3_4:39364606-39364625 | None:intergenic | 45.0% | |
| TAATCCAACAGGGACAAGAG+TGG | + | chr3_4:39364607-39364626 | None:intergenic | 45.0% | |
| !! | AGTAATGGGCAAAATTGGCC+TGG | + | chr3_4:39364795-39364814 | None:intergenic | 45.0% |
| !! | GAAAGCACCAGGGTAGTAAT+GGG | + | chr3_4:39364809-39364828 | None:intergenic | 45.0% |
| !! | TGAAAGCACCAGGGTAGTAA+TGG | + | chr3_4:39364810-39364829 | None:intergenic | 45.0% |
| !! | TATAGGTGGTGAAAGCACCA+GGG | + | chr3_4:39364819-39364838 | None:intergenic | 45.0% |
| !! | ATATAGGTGGTGAAAGCACC+AGG | + | chr3_4:39364820-39364839 | None:intergenic | 45.0% |
| GGCAGAAAACAAGTTTGCAG+TGG | - | chr3_4:39365034-39365053 | Msa0499900:intron | 45.0% | |
| AACAAGTTTGCAGTGGGAAG+TGG | - | chr3_4:39365041-39365060 | Msa0499900:intron | 45.0% | |
| ! | CGCACAGCCATCATATTTTC+AGG | + | chr3_4:39365158-39365177 | None:intergenic | 45.0% |
| GAAACCAGTGTCAACACAGA+CGG | + | chr3_4:39365773-39365792 | None:intergenic | 45.0% | |
| AATCCAACCCACTCATCAAC+AGG | + | chr3_4:39366142-39366161 | None:intergenic | 45.0% | |
| !! | TGTTGATGAGTGGGTTGGAT+TGG | - | chr3_4:39366141-39366160 | Msa0499900:intron | 45.0% |
| TGCTCATCAAAGCAGTGGAT+GGG | + | chr3_4:39366199-39366218 | None:intergenic | 45.0% | |
| CAAACTGCTCATCAAAGCAG+TGG | + | chr3_4:39366204-39366223 | None:intergenic | 45.0% | |
| CACTGCTTTGATGAGCAGTT+TGG | - | chr3_4:39366202-39366221 | Msa0499900:intron | 45.0% | |
| TCATGGCATCCCGATAATGT+TGG | - | chr3_4:39366405-39366424 | Msa0499900:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_4:39366770-39366789 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3_4:39366770-39366789 | Msa0499900:intron | 45.0% |
| GCTACTAGGATGCACTTGAT+TGG | - | chr3_4:39366818-39366837 | Msa0499900:intron | 45.0% | |
| CCAATTCGACTTTGAACGCA+CGG | + | chr3_4:39367172-39367191 | None:intergenic | 45.0% | |
| TGGTTACGGTTCCAAAGACA+CGG | - | chr3_4:39367189-39367208 | Msa0499900:intron | 45.0% | |
| TCTTCTTGCGACAACATCCA+CGG | - | chr3_4:39367614-39367633 | Msa0499900:intron | 45.0% | |
| GCATCAGTCTTCAAACAGTG+GGG | + | chr3_4:39367910-39367929 | None:intergenic | 45.0% | |
| !! | CAGAAGGTACTCAGATCCAA+AGG | + | chr3_4:39368075-39368094 | None:intergenic | 45.0% |
| !! | TAAGCTAGGGTATTGCCACT+TGG | + | chr3_4:39368183-39368202 | None:intergenic | 45.0% |
| GGCAATACCCTAGCTTATGT+AGG | - | chr3_4:39368186-39368205 | Msa0499900:intron | 45.0% | |
| ATCACGGAACACGACATTCT+GGG | + | chr3_4:39368633-39368652 | None:intergenic | 45.0% | |
| AATCACGGAACACGACATTC+TGG | + | chr3_4:39368634-39368653 | None:intergenic | 45.0% | |
| TGAGAGAACGGTAATAGGTG+TGG | - | chr3_4:39368791-39368810 | Msa0499900:intron | 45.0% | |
| GAGAGAACGGTAATAGGTGT+GGG | - | chr3_4:39368792-39368811 | Msa0499900:intron | 45.0% | |
| CTGCAGATGAAAGAGGAGTT+TGG | - | chr3_4:39368841-39368860 | Msa0499900:intron | 45.0% | |
| !! | TTTCCTCTAGGGGTTTTGTC+AGG | - | chr3_4:39369012-39369031 | Msa0499900:intron | 45.0% |
| ATACCTGACAAAACCCCTAG+AGG | + | chr3_4:39369018-39369037 | None:intergenic | 45.0% | |
| !! | AGGGGTTTTGTCAGGTATCT+TGG | - | chr3_4:39369020-39369039 | Msa0499900:intron | 45.0% |
| TTGTCAGGTATCTTGGAGAG+CGG | - | chr3_4:39369027-39369046 | Msa0499900:intron | 45.0% | |
| TGGATCAAGATATGGCTCAC+AGG | - | chr3_4:39369064-39369083 | Msa0499900:intron | 45.0% | |
| AAGAGGTTGTGGCATGAAAC+TGG | - | chr3_4:39369193-39369212 | Msa0499900:intron | 45.0% | |
| AGTCTCATGCTAGGAAGATC+AGG | + | chr3_4:39369231-39369250 | None:intergenic | 45.0% | |
| GGAAAAAAACAGTCAGCTCG+AGG | - | chr3_4:39369278-39369297 | Msa0499900:intron | 45.0% | |
| AAAAAACAGTCAGCTCGAGG+GGG | - | chr3_4:39369281-39369300 | Msa0499900:intron | 45.0% | |
| ! | AGGGGGCCATTAGTTTCATT+TGG | - | chr3_4:39369298-39369317 | Msa0499900:intron | 45.0% |
| CACATGACATGACTCAGTTG+AGG | - | chr3_4:39369708-39369727 | Msa0499900:intron | 45.0% | |
| ! | AGCCATAAAAGAAAGGCACG+AGG | + | chr3_4:39369839-39369858 | None:intergenic | 45.0% |
| TTCCCACACCATACTTGGAT+TGG | + | chr3_4:39370281-39370300 | None:intergenic | 45.0% | |
| ATCGTTTCCCACACCATACT+TGG | + | chr3_4:39370286-39370305 | None:intergenic | 45.0% | |
| ATCATACCTCTTGGTGAGCA+TGG | - | chr3_4:39370510-39370529 | Msa0499900:intron | 45.0% | |
| AATGTTCCATGCTCACCAAG+AGG | + | chr3_4:39370519-39370538 | None:intergenic | 45.0% | |
| GTGAGCATGGAACATTGACA+AGG | - | chr3_4:39370523-39370542 | Msa0499900:intron | 45.0% | |
| !! | ACAAGGCGTTTTAGCACATC+AGG | - | chr3_4:39370540-39370559 | Msa0499900:intron | 45.0% |
| TTAGCACATCAGGTTAGTGG+TGG | - | chr3_4:39370550-39370569 | Msa0499900:intron | 45.0% | |
| TAGCACATCAGGTTAGTGGT+GGG | - | chr3_4:39370551-39370570 | Msa0499900:intron | 45.0% | |
| ! | TCAGGTTAGTGGTGGGAAAA+TGG | - | chr3_4:39370558-39370577 | Msa0499900:intron | 45.0% |
| CTTCCCTGAAACTACAGGAT+TGG | - | chr3_4:39370657-39370676 | Msa0499900:intron | 45.0% | |
| CCATCCAATCCTGTAGTTTC+AGG | + | chr3_4:39370664-39370683 | None:intergenic | 45.0% | |
| CCTGAAACTACAGGATTGGA+TGG | - | chr3_4:39370661-39370680 | Msa0499900:intron | 45.0% | |
| TGGTTGTGAGGAATTGGAAG+TGG | - | chr3_4:39370785-39370804 | Msa0499900:intron | 45.0% | |
| TGAGGAATTGGAAGTGGTCA+AGG | - | chr3_4:39370791-39370810 | Msa0499900:intron | 45.0% | |
| !! | ATATATATTATAAATAGAAA+AGG | - | chr3_4:39361957-39361976 | Msa0499900:intron | 5.0% |
| !! | CATATAATTAATTATTAATT+TGG | + | chr3_4:39363102-39363121 | None:intergenic | 5.0% |
| !! | AATAATAATAATAATATGTT+GGG | + | chr3_4:39364903-39364922 | None:intergenic | 5.0% |
| !! | TAATAATAATAATAATATGT+TGG | + | chr3_4:39364904-39364923 | None:intergenic | 5.0% |
| !! | TTAAATAAATTAATATATGT+TGG | - | chr3_4:39365281-39365300 | Msa0499900:CDS | 5.0% |
| !! | TAAATAAATTAATATATGTT+GGG | - | chr3_4:39365282-39365301 | Msa0499900:CDS | 5.0% |
| !! | AAAAAATTGTAAAATATTAA+GGG | + | chr3_4:39366933-39366952 | None:intergenic | 5.0% |
| !! | AAAAAAATTGTAAAATATTA+AGG | + | chr3_4:39366934-39366953 | None:intergenic | 5.0% |
| !!! | TATTCTTTTTTAAAAATATT+TGG | - | chr3_4:39368452-39368471 | Msa0499900:intron | 5.0% |
| !!! | ATTCTTTTTTAAAAATATTT+GGG | - | chr3_4:39368453-39368472 | Msa0499900:intron | 5.0% |
| ! | GGTTGGTTGGTTGGTTGGTT+GGG | + | chr3_4:39360757-39360776 | None:intergenic | 50.0% |
| ! | AGGTTGGTTGGTTGGTTGGT+TGG | + | chr3_4:39360758-39360777 | None:intergenic | 50.0% |
| ! | GCACCTTTGATCAGAGGTGT+CGG | - | chr3_4:39361371-39361390 | Msa0499900:CDS | 50.0% |
| CTAGCTCCTTTCTGTCACTC+AGG | + | chr3_4:39361658-39361677 | None:intergenic | 50.0% | |
| GGAGCTAGAAGTTGTGGTTC+TGG | - | chr3_4:39361670-39361689 | Msa0499900:intron | 50.0% | |
| CTCCCCTGTCTACAATAGGA+GGG | + | chr3_4:39361821-39361840 | None:intergenic | 50.0% | |
| TCTCCCCTGTCTACAATAGG+AGG | + | chr3_4:39361822-39361841 | None:intergenic | 50.0% | |
| TGGAGGCCAAGTCTCCAATT+CGG | + | chr3_4:39362708-39362727 | None:intergenic | 50.0% | |
| AATGCGACCACTGCAAAAGG+AGG | + | chr3_4:39362978-39362997 | None:intergenic | 50.0% | |
| TGCTTGCGTCTCAGCCTTTA+TGG | - | chr3_4:39363457-39363476 | Msa0499900:intron | 50.0% | |
| GAGGGAAAGATACTCGGACT+AGG | - | chr3_4:39363572-39363591 | Msa0499900:intron | 50.0% | |
| ACACAGGCACTCACGAATTC+CGG | + | chr3_4:39364252-39364271 | None:intergenic | 50.0% | |
| ! | GGACTTTTCACCCTTTGGTC+TGG | - | chr3_4:39364285-39364304 | Msa0499900:intron | 50.0% |
| GTCGGAACAAAACTGGGACA+TGG | + | chr3_4:39364498-39364517 | None:intergenic | 50.0% | |
| ATCCAACAGGGACAAGAGTG+GGG | + | chr3_4:39364605-39364624 | None:intergenic | 50.0% | |
| GCGTCAGACAAGCATGACAA+CGG | + | chr3_4:39364678-39364697 | None:intergenic | 50.0% | |
| GTTACCGCGCTCTTAAATGC+TGG | - | chr3_4:39365370-39365389 | Msa0499900:intron | 50.0% | |
| AAGGCCAGCATTTAAGAGCG+CGG | + | chr3_4:39365377-39365396 | None:intergenic | 50.0% | |
| ! | TATGCCGTCTGTGTTGACAC+TGG | - | chr3_4:39365766-39365785 | Msa0499900:intron | 50.0% |
| TTGGGTACAGTTGAGCCCAT+GGG | + | chr3_4:39366078-39366097 | None:intergenic | 50.0% | |
| ! | TACCCAGCCTGTTGATGAGT+GGG | - | chr3_4:39366132-39366151 | Msa0499900:intron | 50.0% |
| AACCCACTCATCAACAGGCT+GGG | + | chr3_4:39366137-39366156 | None:intergenic | 50.0% | |
| ATCAAAGCAGTGGATGGGAC+TGG | + | chr3_4:39366194-39366213 | None:intergenic | 50.0% | |
| CTGCTCATCAAAGCAGTGGA+TGG | + | chr3_4:39366200-39366219 | None:intergenic | 50.0% | |
| !! | ACTAGAGGTGTCTGTGGGTT+AGG | + | chr3_4:39366250-39366269 | None:intergenic | 50.0% |
| CCGTGCGTTCAAAGTCGAAT+TGG | - | chr3_4:39367169-39367188 | Msa0499900:intron | 50.0% | |
| TTGCGACAACATCCACGGAT+GGG | - | chr3_4:39367619-39367638 | Msa0499900:intron | 50.0% | |
| CTTGGACATTCGGAGTCAAG+TGG | - | chr3_4:39368154-39368173 | Msa0499900:intron | 50.0% | |
| TGATGTGGGTCCTTCTCCTT+TGG | - | chr3_4:39368607-39368626 | Msa0499900:intron | 50.0% | |
| ACATTCTGGGCCAAAGGAGA+AGG | + | chr3_4:39368620-39368639 | None:intergenic | 50.0% | |
| AACACGACATTCTGGGCCAA+AGG | + | chr3_4:39368626-39368645 | None:intergenic | 50.0% | |
| CATCACGGAGAGGCAAATCA+CGG | + | chr3_4:39368649-39368668 | None:intergenic | 50.0% | |
| ! | TGATTTGCCTCTCCGTGATG+TGG | - | chr3_4:39368649-39368668 | Msa0499900:CDS | 50.0% |
| GATTTGCCTCTCCGTGATGT+GGG | - | chr3_4:39368650-39368669 | Msa0499900:CDS | 50.0% | |
| GAGCGGAAGACAGTATCATC+TGG | - | chr3_4:39369044-39369063 | Msa0499900:intron | 50.0% | |
| TGGCCAATCCAAGTATGGTG+TGG | - | chr3_4:39370275-39370294 | Msa0499900:intron | 50.0% | |
| GGCCAATCCAAGTATGGTGT+GGG | - | chr3_4:39370276-39370295 | Msa0499900:intron | 50.0% | |
| CCAAAGCAACTAGCCGAAAC+TGG | + | chr3_4:39370628-39370647 | None:intergenic | 50.0% | |
| ! | CCAGTTTCGGCTAGTTGCTT+TGG | - | chr3_4:39370625-39370644 | Msa0499900:intron | 50.0% |
| ! | GCACCGACACCTCTGATCAA+AGG | + | chr3_4:39361377-39361396 | None:intergenic | 55.0% |
| CAGGGGAGAAGAAAAGGCCT+TGG | - | chr3_4:39361833-39361852 | Msa0499900:intron | 55.0% | |
| CACTCACGAATTCCGGTCGT+GGG | + | chr3_4:39364245-39364264 | None:intergenic | 55.0% | |
| CAACGGTCACCCAGACCAAA+GGG | + | chr3_4:39364298-39364317 | None:intergenic | 55.0% | |
| GAGCAGCACGGTTTAGCCTA+AGG | + | chr3_4:39364436-39364455 | None:intergenic | 55.0% | |
| TTCCCCACTCTTGTCCCTGT+TGG | - | chr3_4:39364600-39364619 | Msa0499900:intron | 55.0% | |
| CTGGGGTTTGATCCTCTACC+AGG | - | chr3_4:39364774-39364793 | Msa0499900:intron | 55.0% | |
| ! | GGGCAAAATTGGCCTGGTAG+AGG | + | chr3_4:39364789-39364808 | None:intergenic | 55.0% |
| ! | GCGCTCTTAAATGCTGGCCT+TGG | - | chr3_4:39365376-39365395 | Msa0499900:intron | 55.0% |
| GTTGGGTACAGTTGAGCCCA+TGG | + | chr3_4:39366079-39366098 | None:intergenic | 55.0% | |
| ! | GTACCCAGCCTGTTGATGAG+TGG | - | chr3_4:39366131-39366150 | Msa0499900:intron | 55.0% |
| CAACCCACTCATCAACAGGC+TGG | + | chr3_4:39366138-39366157 | None:intergenic | 55.0% | |
| ! | CAGCCTGTTGATGAGTGGGT+TGG | - | chr3_4:39366136-39366155 | Msa0499900:intron | 55.0% |
| ! | GTTTGCTAACCCACCTGCAG+AGG | + | chr3_4:39366347-39366366 | None:intergenic | 55.0% |
| CTTGCGACAACATCCACGGA+TGG | - | chr3_4:39367618-39367637 | Msa0499900:intron | 55.0% | |
| TACTCTGCACTTCCCATCCG+TGG | + | chr3_4:39367634-39367653 | None:intergenic | 55.0% | |
| GGAGTCAAGTGGTCACCAAG+TGG | - | chr3_4:39368165-39368184 | Msa0499900:intron | 55.0% | |
| GTGGATGCTGACCCACATCA+CGG | + | chr3_4:39368664-39368683 | None:intergenic | 55.0% | |
| GCAACTAGCCGAAACTGGCA+AGG | + | chr3_4:39370623-39370642 | None:intergenic | 55.0% | |
| CGACAACGACAGGTCGAGCT+GGG | + | chr3_4:39363632-39363651 | None:intergenic | 60.0% | |
| CCAGCTCGACCTGTCGTTGT+CGG | - | chr3_4:39363630-39363649 | Msa0499900:intron | 60.0% | |
| !! | CTGTCGTTGTCGGTGCTGCT+GGG | - | chr3_4:39363640-39363659 | Msa0499900:intron | 60.0% |
| !! | TGTCGTTGTCGGTGCTGCTG+GGG | - | chr3_4:39363641-39363660 | Msa0499900:intron | 60.0% |
| CAGGTTTCCCAGCTCGACGT+CGG | - | chr3_4:39363717-39363736 | Msa0499900:intron | 60.0% | |
| GCACTCACGAATTCCGGTCG+TGG | + | chr3_4:39364246-39364265 | None:intergenic | 60.0% | |
| GCAACGGTCACCCAGACCAA+AGG | + | chr3_4:39364299-39364318 | None:intergenic | 60.0% | |
| TGCTGACCCACATCACGGAG+AGG | + | chr3_4:39368659-39368678 | None:intergenic | 60.0% | |
| TGGCCCATGCCCGATCAATG+CGG | - | chr3_4:39368900-39368919 | Msa0499900:intron | 60.0% | |
| ! | CAGCCGCATTGATCGGGCAT+GGG | + | chr3_4:39368906-39368925 | None:intergenic | 60.0% |
| CATGCCCGATCAATGCGGCT+GGG | - | chr3_4:39368905-39368924 | Msa0499900:intron | 60.0% | |
| ! | TTGGCCCAGCCGCATTGATC+GGG | + | chr3_4:39368912-39368931 | None:intergenic | 60.0% |
| ! | GTTGGCCCAGCCGCATTGAT+CGG | + | chr3_4:39368913-39368932 | None:intergenic | 60.0% |
| CCGACAACGACAGGTCGAGC+TGG | + | chr3_4:39363633-39363652 | None:intergenic | 65.0% | |
| !! | CCAGCAGCACCGACAACGAC+AGG | + | chr3_4:39363642-39363661 | None:intergenic | 65.0% |
| !! | CCTGTCGTTGTCGGTGCTGC+TGG | - | chr3_4:39363639-39363658 | Msa0499900:intron | 65.0% |
| !! | AGCAGCACCGACGTCGAGCT+GGG | + | chr3_4:39363727-39363746 | None:intergenic | 65.0% |
| !! | AGCTCGACGTCGGTGCTGCT+GGG | - | chr3_4:39363727-39363746 | Msa0499900:intron | 65.0% |
| CGGATTGAGGGGGGATTGCC+AGG | + | chr3_4:39363800-39363819 | None:intergenic | 65.0% | |
| ! | CCAGCCGCATTGATCGGGCA+TGG | + | chr3_4:39368907-39368926 | None:intergenic | 65.0% |
| CCATGCCCGATCAATGCGGC+TGG | - | chr3_4:39368904-39368923 | Msa0499900:intron | 65.0% | |
| !! | TTGTCGGTGCTGCTGGGGCC+TGG | - | chr3_4:39363646-39363665 | Msa0499900:intron | 70.0% |
| !! | CAGCAGCACCGACGTCGAGC+TGG | + | chr3_4:39363728-39363747 | None:intergenic | 70.0% |
| !! | CAGCTCGACGTCGGTGCTGC+TGG | - | chr3_4:39363726-39363745 | Msa0499900:intron | 70.0% |
| !! | GCTCGACGTCGGTGCTGCTG+GGG | - | chr3_4:39363728-39363747 | Msa0499900:intron | 70.0% |
| !! | ACGTCGGTGCTGCTGGGGCC+TGG | - | chr3_4:39363733-39363752 | Msa0499900:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 39360644 | 39371045 | 39360644 | ID=Msa0499900;Name=Msa0499900 |
| chr3_4 | mRNA | 39360644 | 39371045 | 39360644 | ID=Msa0499900-mRNA-1;Parent=Msa0499900;Name=Msa0499900-mRNA-1;_AED=0.14;_eAED=0.14;_QI=179|1|1|1|1|1|15|310|375 |
| chr3_4 | exon | 39360644 | 39361015 | 39360644 | ID=Msa0499900-mRNA-1:exon:8086;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39361128 | 39361183 | 39361128 | ID=Msa0499900-mRNA-1:exon:8085;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39361334 | 39361440 | 39361334 | ID=Msa0499900-mRNA-1:exon:8084;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39362604 | 39362667 | 39362604 | ID=Msa0499900-mRNA-1:exon:8083;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39362827 | 39362912 | 39362827 | ID=Msa0499900-mRNA-1:exon:8082;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39363022 | 39363110 | 39363022 | ID=Msa0499900-mRNA-1:exon:8081;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39363482 | 39363563 | 39363482 | ID=Msa0499900-mRNA-1:exon:8080;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39363872 | 39363911 | 39363872 | ID=Msa0499900-mRNA-1:exon:8079;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39364004 | 39364077 | 39364004 | ID=Msa0499900-mRNA-1:exon:8078;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39365267 | 39365336 | 39365267 | ID=Msa0499900-mRNA-1:exon:8077;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39366581 | 39366650 | 39366581 | ID=Msa0499900-mRNA-1:exon:8076;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39367210 | 39367304 | 39367210 | ID=Msa0499900-mRNA-1:exon:8075;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39367432 | 39367508 | 39367432 | ID=Msa0499900-mRNA-1:exon:8074;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39368616 | 39368701 | 39368616 | ID=Msa0499900-mRNA-1:exon:8073;Parent=Msa0499900-mRNA-1 |
| chr3_4 | exon | 39370797 | 39371045 | 39370797 | ID=Msa0499900-mRNA-1:exon:8072;Parent=Msa0499900-mRNA-1 |
| chr3_4 | five_prime_UTR | 39370867 | 39371045 | 39370867 | ID=Msa0499900-mRNA-1:five_prime_utr;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39370797 | 39370866 | 39370797 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39368616 | 39368701 | 39368616 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39367432 | 39367508 | 39367432 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39367210 | 39367304 | 39367210 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39366581 | 39366650 | 39366581 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39365267 | 39365336 | 39365267 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39364004 | 39364077 | 39364004 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39363872 | 39363911 | 39363872 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39363482 | 39363563 | 39363482 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39363022 | 39363110 | 39363022 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39362827 | 39362912 | 39362827 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39362604 | 39362667 | 39362604 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39361334 | 39361440 | 39361334 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39361128 | 39361183 | 39361128 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | CDS | 39360954 | 39361015 | 39360954 | ID=Msa0499900-mRNA-1:cds;Parent=Msa0499900-mRNA-1 |
| chr3_4 | three_prime_UTR | 39360644 | 39360953 | 39360644 | ID=Msa0499900-mRNA-1:three_prime_utr;Parent=Msa0499900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
