AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050960 MtrunA17_Chr7g0220231 98.163 762 13 1 1 762 1 761 0.0 1537
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050960 AT5G38880.1 70.166 781 205 6 4 761 6 781 0.0 1102

Find 230 sgRNAs with CRISPR-Local

Find 623 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTACAGTATCCACTTTA+TGG 0.131855 7_2:-17219510 Msa1050960:CDS
AGAGGTTTCTTTCTTGTTCT+TGG 0.168300 7_2:+17214483 None:intergenic
TTCTTGTTCTTGGGGTTTCT+TGG 0.176756 7_2:+17214493 None:intergenic
TCTAATTAGTGACTCGTTAT+TGG 0.179445 7_2:-17222597 Msa1050960:five_prime_UTR
GTTAGTTATGTTATGTTTAA+TGG 0.182783 7_2:+17222670 None:intergenic
ATCTCGGCTTAGTCGCTTCT+TGG 0.189413 7_2:-17222640 Msa1050960:five_prime_UTR
TATAGTAACAGAGACGTTTA+TGG 0.205757 7_2:+17220370 None:intergenic
TGCAGGATGCTGCTTCATTT+TGG 0.252455 7_2:-17217165 Msa1050960:intron
GAGGTTTCTTTCTTGTTCTT+GGG 0.257118 7_2:+17214484 None:intergenic
CAGTAATTGCCTGAAGTAAT+AGG 0.266699 7_2:+17219998 None:intergenic
AAGAGAAGTTGCTGGTTTAA+AGG 0.281025 7_2:-17217911 Msa1050960:CDS
GAAGAGAGAAGGGGAGGAAG+TGG 0.281721 7_2:-17222227 Msa1050960:CDS
TAAGAAGGGGTTATTCTCTT+TGG 0.297881 7_2:+17222744 None:intergenic
TTGATGAACGGGCGAATTAC+AGG 0.306303 7_2:-17222069 Msa1050960:intron
GCACAAGATCCCGTCTAATA+TGG 0.306533 7_2:+17215435 None:intergenic
TGGAAGCTTGCAAATATGTT+TGG 0.312539 7_2:-17215072 Msa1050960:CDS
AGCTGTTTATTCTACTGTTA+AGG 0.323612 7_2:-17220262 Msa1050960:CDS
CATGTATTCAGCTAGATGTT+TGG 0.326608 7_2:-17217942 Msa1050960:intron
GGAAGCTTGCAAATATGTTT+GGG 0.327032 7_2:-17215071 Msa1050960:CDS
GGAAGTGGAGGTTGCGTTGA+TGG 0.329516 7_2:-17222212 Msa1050960:CDS
ATGTATTCAGCTAGATGTTT+GGG 0.331353 7_2:-17217941 Msa1050960:intron
CTCCGGCGCTGGCGGCGTAT+TGG 0.336927 7_2:+17222419 None:intergenic
GTACTTCAAGCATTTACTTT+GGG 0.340628 7_2:-17214549 Msa1050960:CDS
CCTCGTAACACGTGCGAAAT+CGG 0.342227 7_2:-17222323 Msa1050960:CDS
CACGGTGAAGGGGATGGTGG+TGG 0.347298 7_2:-17222262 Msa1050960:CDS
CTTTATGGAAATGGAAAACT+TGG 0.352170 7_2:-17219495 Msa1050960:CDS
CAGTATCCACTTTATGGAAA+TGG 0.356840 7_2:-17219504 Msa1050960:CDS
GATGTTACTTCTCGTTCAAT+TGG 0.357862 7_2:-17219239 Msa1050960:CDS
TGGAAGTCTTAGACAACTTC+AGG 0.363351 7_2:-17219192 Msa1050960:intron
TTTAAGAAGTGCGGTGTATA+TGG 0.370811 7_2:+17217753 None:intergenic
AGTAATTGCCTGAAGTAATA+GGG 0.377154 7_2:+17219999 None:intergenic
CGGCATCGACGGTTGTCGAC+TGG 0.377291 7_2:-17214786 Msa1050960:CDS
CGAATGGCTTCACAAAGAAA+TGG 0.379940 7_2:-17222458 Msa1050960:CDS
TTTGAATGCTCAGCAGAGTT+TGG 0.382937 7_2:-17215092 Msa1050960:CDS
GGAAGAAGGAGAAGAGAGAA+GGG 0.385063 7_2:-17222237 Msa1050960:CDS
TTCTTAATGCGCAGGCTTGG+AGG 0.387723 7_2:-17215567 Msa1050960:intron
GCTGTTTATTCTACTGTTAA+GGG 0.389280 7_2:-17220261 Msa1050960:CDS
TCAAGCAGAAGCAGCGAAGC+TGG 0.397262 7_2:-17220091 Msa1050960:CDS
AAAGTAAATGCTTGAAGTAC+TGG 0.399325 7_2:+17214552 None:intergenic
TCATGCCTACTTTGTTCAAC+AGG 0.399440 7_2:-17215390 Msa1050960:CDS
GGCTTAGTCGCTTCTTGGAC+CGG 0.403530 7_2:-17222635 Msa1050960:five_prime_UTR
GAAGAGGATGCTTGATGAAC+GGG 0.405836 7_2:-17222080 Msa1050960:CDS
AGAAGGAGGTTGAGAGGTTG+AGG 0.408148 7_2:-17222174 Msa1050960:CDS
CGTGGATTCTTCCGTTGAAA+TGG 0.408715 7_2:-17220316 Msa1050960:CDS
GAGTCCTCCCCTATTACTTC+AGG 0.412492 7_2:-17220007 Msa1050960:CDS
TTAATGGTTGGATCTGATAC+TGG 0.414055 7_2:+17222686 None:intergenic
GGAGAGGGATTCGGTGAAGA+AGG 0.415697 7_2:-17222191 Msa1050960:CDS
GTAATAGGGGAGGACTCTTT+AGG 0.420923 7_2:+17220013 None:intergenic
TGATGAGTGGTGGGAGCAAC+CGG 0.422273 7_2:-17214806 Msa1050960:CDS
AGCATGTAGAGGCTATTATC+TGG 0.424373 7_2:+17217013 None:intergenic
GGCTTGGAGGGTTCAGATGC+TGG 0.426927 7_2:-17215554 Msa1050960:CDS
CAGGCACTGCTTGAGGCCAT+CGG 0.427432 7_2:-17216096 Msa1050960:CDS
ATCGGGTCCAGTGGATCATC+TGG 0.429603 7_2:-17216078 Msa1050960:CDS
ATGGATGTTTCCTCTTCTGA+TGG 0.430234 7_2:-17219540 Msa1050960:CDS
AGTACTTCAAGCATTTACTT+TGG 0.430411 7_2:-17214550 Msa1050960:CDS
TGCGTTGATGGAGAGGGATT+CGG 0.432482 7_2:-17222200 Msa1050960:CDS
GCTGAGACCCGACATATTGA+TGG 0.433205 7_2:+17215976 None:intergenic
ACTTCTCGTTCAATTGGGAT+TGG 0.433276 7_2:-17219233 Msa1050960:CDS
TCGCTTCTTGGACCGGATAC+CGG 0.439475 7_2:-17222628 Msa1050960:five_prime_UTR
GATGATCCGGTGTTTGTTGT+TGG 0.439934 7_2:+17222784 None:intergenic
CGCACTTCTTAAAGCAAATA+CGG 0.440398 7_2:-17217743 Msa1050960:intron
CTGCCGCGGGAACATGATTC+CGG 0.443342 7_2:-17222356 Msa1050960:CDS
GGATGGTGGTGGGAGGAAGA+AGG 0.444216 7_2:-17222251 Msa1050960:CDS
GAATGTGAGGAGGAATATTA+CGG 0.449349 7_2:-17222287 Msa1050960:CDS
ATATGAAAATAACATAGTTA+TGG 0.453264 7_2:-17219559 Msa1050960:CDS
TGGTTCAGAAGCTAGTGTTT+TGG 0.454086 7_2:-17215486 Msa1050960:CDS
AGGAAGAAGGAGAAGAGAGA+AGG 0.454517 7_2:-17222238 Msa1050960:CDS
AGCTTCGCTGCTTCTGCTTG+AGG 0.455594 7_2:+17220093 None:intergenic
ATGTTACTTCTCGTTCAATT+GGG 0.456308 7_2:-17219238 Msa1050960:CDS
CACTAATTAGACTGTGTATC+CGG 0.457866 7_2:+17222609 None:intergenic
TGATGGGCAGATTCCGGATG+AGG 0.464339 7_2:-17220058 Msa1050960:CDS
CTTGGGGCTGATGTGCCTCC+AGG 0.466724 7_2:-17219477 Msa1050960:CDS
GGGAAGAAGCGGAGAGGAAG+AGG 0.466854 7_2:-17222096 Msa1050960:CDS
CATGCTTCCTTCTTCACCAC+AGG 0.472095 7_2:-17216996 Msa1050960:intron
TTCTGCAGCTTGATGAGTGG+TGG 0.472825 7_2:-17214816 Msa1050960:intron
ATAACTGTTCTAACCTCATC+CGG 0.473562 7_2:+17220045 None:intergenic
GAATAAAGACCTGTCTTTCA+AGG 0.474678 7_2:+17219436 None:intergenic
AGGTTTCTTTCTTGTTCTTG+GGG 0.477971 7_2:+17214485 None:intergenic
GTTATGTTATGTTTAATGGT+TGG 0.477982 7_2:+17222674 None:intergenic
AAAACACCAGTCTTGAGTTC+AGG 0.477991 7_2:+17215112 None:intergenic
TTAACTCTAATGAGTAAGAA+GGG 0.478353 7_2:+17222730 None:intergenic
GACAGCAAGAGCTGGTGCTC+GGG 0.478476 7_2:-17216013 Msa1050960:CDS
GTCGACTGGGTGACAGTGGA+TGG 0.478572 7_2:-17214772 Msa1050960:CDS
TAGACTGTGTATCCGGTATC+CGG 0.478984 7_2:+17222616 None:intergenic
AAATCAGCTCCTTGAAAGAC+AGG 0.479838 7_2:-17219445 Msa1050960:intron
GAAGGAGAAGAGAGAAGGGG+AGG 0.480900 7_2:-17222233 Msa1050960:CDS
GGCCAATACGCCGCCAGCGC+CGG 0.481521 7_2:-17222421 Msa1050960:CDS
TTCATCACATTGGCGGTCAT+AGG 0.482889 7_2:+17220416 None:intergenic
AGGCACTGCTTGAGGCCATC+GGG 0.484747 7_2:-17216095 Msa1050960:CDS
CAAGCAGAAGCAGCGAAGCT+GGG 0.485794 7_2:-17220090 Msa1050960:CDS
TTTAACTCTAATGAGTAAGA+AGG 0.489019 7_2:+17222729 None:intergenic
ATCTTCGGCTTCTTTCCTCT+CGG 0.489665 7_2:+17217837 None:intergenic
TTCAAGCATTTACTTTGGGA+TGG 0.490306 7_2:-17214545 Msa1050960:CDS
GCAAAGGAAAGAGAAGTTGC+TGG 0.490620 7_2:-17217919 Msa1050960:CDS
GTGAAGGGGATGGTGGTGGG+AGG 0.491173 7_2:-17222258 Msa1050960:CDS
GAGAGAAGGGGAGGAAGTGG+AGG 0.492293 7_2:-17222224 Msa1050960:CDS
GCAAGGGATGCTCAAAGATC+AGG 0.494346 7_2:-17220339 Msa1050960:CDS
TGGATGTTTCCTCTTCTGAT+GGG 0.496110 7_2:-17219539 Msa1050960:CDS
TGCTGGTCTAGCATCCGTAC+TGG 0.496331 7_2:-17215537 Msa1050960:CDS
TGACAGCAAGAGCTGGTGCT+CGG 0.497816 7_2:-17216014 Msa1050960:CDS
GGCAATTCCATCAATATGTC+GGG 0.498007 7_2:-17215983 Msa1050960:CDS
ACGCCACTTCCTTCGTAAGC+AGG 0.500417 7_2:+17220126 None:intergenic
TTTCGGATCGATTCGACTGA+CGG 0.501011 7_2:+17222382 None:intergenic
GGCATCGACGGTTGTCGACT+GGG 0.501409 7_2:-17214785 Msa1050960:CDS
GAATGGCTTCACAAAGAAAT+GGG 0.502140 7_2:-17222457 Msa1050960:CDS
GCTGCACTTCAGTATGCTGC+TGG 0.502447 7_2:-17215955 Msa1050960:CDS
CTTTGTCTTGTGTTGAGTAG+AGG 0.504792 7_2:+17222813 None:intergenic
AGCCATTCGAGTATCACTTC+CGG 0.507370 7_2:+17222472 None:intergenic
TTATAAACCTGTGGTGAAGA+AGG 0.508261 7_2:+17216989 None:intergenic
TTAATCTTGTCCATATTAGA+CGG 0.508890 7_2:-17215445 Msa1050960:CDS
TGTTGTGAGGAGACAGAGGA+AGG 0.512237 7_2:-17222149 Msa1050960:CDS
ATATTACGGTTCACGGTGAA+GGG 0.512455 7_2:-17222273 Msa1050960:CDS
CAGGCATAAGCAAGTGATGT+TGG 0.512719 7_2:-17220442 Msa1050960:CDS
TTGCAAATATGTTTGGGGAT+TGG 0.513243 7_2:-17215065 Msa1050960:intron
CGGTGAAGAAGGAGGTTGAG+AGG 0.514023 7_2:-17222180 Msa1050960:CDS
TTTCCTGCTTACGAAGGAAG+TGG 0.514296 7_2:-17220129 Msa1050960:CDS
TCTGCAGCTTGATGAGTGGT+GGG 0.516666 7_2:-17214815 Msa1050960:intron
ATCTTTCTGATGTGATGATC+CGG 0.516949 7_2:+17222771 None:intergenic
AATATTACGGTTCACGGTGA+AGG 0.519453 7_2:-17222274 Msa1050960:CDS
GGAGGTTGCGTTGATGGAGA+GGG 0.522089 7_2:-17222206 Msa1050960:CDS
GGAATGTTGTGAGGAGACAG+AGG 0.522586 7_2:-17222153 Msa1050960:CDS
CGAAATCGGAGAAGACGGTT+AGG 0.523499 7_2:-17222309 Msa1050960:CDS
CGAGGATGCTAGAGGTTTCG+AGG 0.524771 7_2:-17222117 Msa1050960:CDS
ACAATCTTCATCGCCGTCAC+CGG 0.528251 7_2:-17222491 Msa1050960:CDS
AGCTGGTGCTCGGGATCCGT+CGG 0.529057 7_2:-17216004 Msa1050960:CDS
TCGAAGCTTCATCACATTGG+CGG 0.529322 7_2:+17220409 None:intergenic
AGCATCCGTACTGGAGTCCC+TGG 0.531380 7_2:-17215528 Msa1050960:CDS
CACACTTCTGAAGAGAAAGA+AGG 0.534065 7_2:+17214431 None:intergenic
ATAGTCCTGTTGAACAAAGT+AGG 0.534887 7_2:+17215385 None:intergenic
TTAGTGACTCGTTATTGGAC+CGG 0.537065 7_2:-17222592 Msa1050960:five_prime_UTR
GTCCAGTGGATCATCTGGAC+AGG 0.537413 7_2:-17216073 Msa1050960:CDS
TGGAGGTTGCGTTGATGGAG+AGG 0.537697 7_2:-17222207 Msa1050960:CDS
TCTTAATGCGCAGGCTTGGA+GGG 0.537896 7_2:-17215566 Msa1050960:intron
TAATCTTGTCCATATTAGAC+GGG 0.538291 7_2:-17215444 Msa1050960:CDS
ACACTTCTGAAGAGAAAGAA+GGG 0.539150 7_2:+17214432 None:intergenic
TGAATCTCTTGTAGCTTACA+TGG 0.539346 7_2:-17220172 Msa1050960:CDS
AAAACTATTTACCATTTCAA+CGG 0.539456 7_2:+17220305 None:intergenic
TTTGTCTTGTGTTGAGTAGA+GGG 0.540267 7_2:+17222814 None:intergenic
GCATATTCCCTTGCAGTCGA+TGG 0.540701 7_2:+17217133 None:intergenic
GCGTTGTATTTCAGACATCA+AGG 0.541137 7_2:+17217876 None:intergenic
GAAGAAGGAGAAGAGAGAAG+GGG 0.541221 7_2:-17222236 Msa1050960:CDS
GTCAGCAACCATCGACTGCA+AGG 0.542373 7_2:-17217141 Msa1050960:CDS
CAGTCGACAACCGTCGATGC+CGG 0.544298 7_2:+17214787 None:intergenic
TTCTCGAAGCTTCATCACAT+TGG 0.544752 7_2:+17220406 None:intergenic
GTTACTATATAAATCAAGCA+AGG 0.546325 7_2:-17220356 Msa1050960:CDS
AGGAGGAATATTACGGTTCA+CGG 0.547542 7_2:-17222280 Msa1050960:CDS
GAGGGATTCGGTGAAGAAGG+AGG 0.548565 7_2:-17222188 Msa1050960:CDS
ATAACTAACTAACTCGATCT+CGG 0.550371 7_2:-17222656 Msa1050960:five_prime_UTR
ACGGTGAAGGGGATGGTGGT+GGG 0.550521 7_2:-17222261 Msa1050960:CDS
TCAGCTAGATGTTTGGGCAA+AGG 0.550594 7_2:-17217935 Msa1050960:intron
TTGTTCAACAGGACTATGAA+AGG 0.552540 7_2:-17215379 Msa1050960:intron
GTTGAGTAGAGGGAAATTGT+TGG 0.553007 7_2:+17222824 None:intergenic
GTGGGAGCAACCGGCATCGA+CGG 0.554649 7_2:-17214797 Msa1050960:CDS
GACGTTTCAAGCAAAACTCC+AGG 0.555173 7_2:+17215510 None:intergenic
TTCTTCTGCAGCTTGATGAG+TGG 0.555882 7_2:-17214819 Msa1050960:intron
TAAACAATGCTGCAGAAGCA+AGG 0.557173 7_2:-17219304 Msa1050960:CDS
TCTGGTTCAGGCACTGCTTG+AGG 0.561058 7_2:-17216103 Msa1050960:intron
TTCCTGTCCAGATGATCCAC+TGG 0.561115 7_2:+17216071 None:intergenic
TTTATGGAAATGGAAAACTT+GGG 0.564742 7_2:-17219494 Msa1050960:CDS
CGGCAATTCCATCAATATGT+CGG 0.564930 7_2:-17215984 Msa1050960:CDS
TCGAGTATCACTTCCGGTGA+CGG 0.566165 7_2:+17222478 None:intergenic
TCAACAACAGCAGAACATGC+TGG 0.570268 7_2:+17217094 None:intergenic
GAGCTGATGCAGAGATCTTG+AGG 0.571777 7_2:-17219918 Msa1050960:intron
AAACTTATGAAACGTCTGCA+TGG 0.572224 7_2:-17219269 Msa1050960:CDS
ACGGTTCACGGTGAAGGGGA+TGG 0.572577 7_2:-17222268 Msa1050960:CDS
GAGGGAAAAGAATATTAGAA+AGG 0.573113 7_2:-17220199 Msa1050960:CDS
GGAGCCACCTCTCAAAATGT+TGG 0.573681 7_2:-17219212 Msa1050960:CDS
CTTGAGGCCATCGGGTCCAG+TGG 0.580795 7_2:-17216087 Msa1050960:CDS
CGTATTTGCTTTAAGAAGTG+CGG 0.581014 7_2:+17217744 None:intergenic
AAACTCCAGGGACTCCAGTA+CGG 0.583455 7_2:+17215523 None:intergenic
TGGTTGCCTGAACTCAAGAC+TGG 0.584766 7_2:-17215118 Msa1050960:CDS
GGAAGAGGATGCTTGATGAA+CGG 0.585097 7_2:-17222081 Msa1050960:CDS
AAACAATGCTGCAGAAGCAA+GGG 0.586745 7_2:-17219303 Msa1050960:CDS
AGAACAAGAAAGAGCTGTCA+CGG 0.587048 7_2:-17215146 Msa1050960:CDS
AGGAGAGCTCCCATCAGAAG+AGG 0.587302 7_2:+17219530 None:intergenic
GCGGGAACATGATTCCGGTA+TGG 0.589206 7_2:-17222351 Msa1050960:CDS
CCATAAAGTGGATACTGTAG+AGG 0.590208 7_2:+17219510 None:intergenic
GAAGCTTGCAAATATGTTTG+GGG 0.591476 7_2:-17215070 Msa1050960:CDS
AGAGGTTTCGAGGGAAGAAG+CGG 0.591929 7_2:-17222107 Msa1050960:CDS
ACGTGCGAAATCGGAGAAGA+CGG 0.591994 7_2:-17222314 Msa1050960:CDS
GAGGATGCTAGAGGTTTCGA+GGG 0.592917 7_2:-17222116 Msa1050960:CDS
AAGCAGAAGCAGCGAAGCTG+GGG 0.592988 7_2:-17220089 Msa1050960:CDS
GCATAAGCAAGTGATGTTGG+AGG 0.594477 7_2:-17220439 Msa1050960:CDS
TGAGACTTCAAATAGTGCAA+AGG 0.605516 7_2:-17217074 Msa1050960:CDS
TTACTATATAAATCAAGCAA+GGG 0.605937 7_2:-17220355 Msa1050960:CDS
GAGTAGAGGGAAATTGTTGG+TGG 0.606278 7_2:+17222827 None:intergenic
AGATGATCCACTGGACCCGA+TGG 0.607871 7_2:+17216080 None:intergenic
TTATGGAAATGGAAAACTTG+GGG 0.612636 7_2:-17219493 Msa1050960:CDS
TCGACTGGGTGACAGTGGAT+GGG 0.613672 7_2:-17214771 Msa1050960:CDS
CACCGGAAGTGATACTCGAA+TGG 0.614871 7_2:-17222474 Msa1050960:CDS
AAAATCAACAGGTGGAGGAG+AGG 0.616530 7_2:+17214465 None:intergenic
CTGGCGGCGTATTGGCCGAG+TGG 0.620113 7_2:+17222427 None:intergenic
GTTCACGGTGAAGGGGATGG+TGG 0.622464 7_2:-17222265 Msa1050960:CDS
GGATGCTCAAAGATCAGGCG+TGG 0.622609 7_2:-17220334 Msa1050960:CDS
TCTGATACTGGATGGTGGAG+TGG 0.622951 7_2:+17222698 None:intergenic
GTAATTGCCTGAAGTAATAG+GGG 0.623240 7_2:+17220000 None:intergenic
TAACTCTAATGAGTAAGAAG+GGG 0.623288 7_2:+17222731 None:intergenic
ACAACACCAACAACAAACAC+CGG 0.624079 7_2:-17222790 Msa1050960:five_prime_UTR
AGAGGTTGAGGAATGTTGTG+AGG 0.624388 7_2:-17222162 Msa1050960:CDS
GGCTGCTTCACAGCAACTCG+AGG 0.627593 7_2:+17214573 None:intergenic
GCACTTCAGTATGCTGCTGG+TGG 0.632432 7_2:-17215952 Msa1050960:intron
CACTTCTGAAGAGAAAGAAG+GGG 0.633656 7_2:+17214433 None:intergenic
TTTGAAAGCGAGGATGCTAG+AGG 0.637353 7_2:-17222125 Msa1050960:CDS
CATATTGATGGAATTGCCGA+CGG 0.639784 7_2:+17215988 None:intergenic
TCAGCAACCATCGACTGCAA+GGG 0.640424 7_2:-17217140 Msa1050960:CDS
GTGAAGAAGGAAGCATGTAG+AGG 0.641857 7_2:+17217002 None:intergenic
AGACGGTTAGGAATGTGAGG+AGG 0.646417 7_2:-17222297 Msa1050960:CDS
AGAGGAAGGATTTGAAAGCG+AGG 0.646849 7_2:-17222135 Msa1050960:CDS
TATTACGGTTCACGGTGAAG+GGG 0.647653 7_2:-17222272 Msa1050960:CDS
AGACGGGATCTTGTGCAAAG+TGG 0.651848 7_2:-17215428 Msa1050960:CDS
GAAATGGGATACAGACCACT+CGG 0.655763 7_2:-17222442 Msa1050960:CDS
AGAAGACGGTTAGGAATGTG+AGG 0.658381 7_2:-17222300 Msa1050960:CDS
GTTACGAGGAAATTCCATAC+CGG 0.668082 7_2:+17222337 None:intergenic
TTTCGAGGGAAGAAGCGGAG+AGG 0.668597 7_2:-17222102 Msa1050960:CDS
TGCAAATGCAGAAATAAGTG+CGG 0.669100 7_2:-17216043 Msa1050960:CDS
GGTTGTCGACTGGGTGACAG+TGG 0.670105 7_2:-17214776 Msa1050960:CDS
ATTGCCTGAAGTAATAGGGG+AGG 0.671022 7_2:+17220003 None:intergenic
ACGAGTTTAACTCAGTGACT+CGG 0.671811 7_2:+17222538 None:intergenic
ACGTTTCAAGCAAAACTCCA+GGG 0.675911 7_2:+17215511 None:intergenic
TGGTTGGATCTGATACTGGA+TGG 0.678955 7_2:+17222690 None:intergenic
GGGGCTGATGTGCCTCCAGG+AGG 0.680711 7_2:-17219474 Msa1050960:CDS
AAAGTAGGCATGATTCAACA+AGG 0.689759 7_2:+17215400 None:intergenic
TTGGATCTGATACTGGATGG+TGG 0.699314 7_2:+17222693 None:intergenic
ATACCGGAATCATGTTCCCG+CGG 0.700361 7_2:+17222353 None:intergenic
ACTTCTGAAGAGAAAGAAGG+GGG 0.704062 7_2:+17214434 None:intergenic
CTTATGAAACGTCTGCATGG+AGG 0.715108 7_2:-17219266 Msa1050960:CDS
AATTGAACGAGAAGTAACAT+CGG 0.724131 7_2:+17219241 None:intergenic
TGAATAAGTTATGTGCCGAG+AGG 0.730094 7_2:-17217852 Msa1050960:CDS
CATTGTCATTGAAACCACGA+GGG 0.732985 7_2:-17220217 Msa1050960:CDS
TCATTGTCATTGAAACCACG+AGG 0.733906 7_2:-17220218 Msa1050960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAAAAAAAAAATA+GGG + chr7_2:17220020-17220039 None:intergenic 0.0%
!! TTATTAAAAAAAAAAAAAAT+AGG + chr7_2:17220021-17220040 None:intergenic 0.0%
!!! ACAATTTTTATATATTTTGT+TGG - chr7_2:17218249-17218268 Msa1050960:intron 10.0%
!! TAAGTTCAATTAAATTATTT+AGG - chr7_2:17219105-17219124 Msa1050960:intron 10.0%
!!! TTTTTTTACATCAAAATTTA+TGG - chr7_2:17219248-17219267 Msa1050960:CDS 10.0%
!!! GAATTGAAAATATTTTATAA+CGG + chr7_2:17221512-17221531 None:intergenic 10.0%
!! AATTTAGTAAATTCATTTAT+AGG - chr7_2:17221927-17221946 Msa1050960:intron 10.0%
!! TTAGTTAAGTTAAAAAAACT+CGG + chr7_2:17214674-17214693 None:intergenic 15.0%
!! ATAATAGACTATAAAGTTAT+TGG - chr7_2:17215861-17215880 Msa1050960:intron 15.0%
!!! TTTGTGACTATAATTTTTTA+AGG - chr7_2:17217398-17217417 Msa1050960:intron 15.0%
!! ATATGAAAATAACATAGTTA+TGG - chr7_2:17217678-17217697 Msa1050960:intron 15.0%
!!! TTTAAAACTTATAGTGAATT+AGG - chr7_2:17218077-17218096 Msa1050960:intron 15.0%
!!! TATATTTAACTTGCTTAAAA+AGG + chr7_2:17218104-17218123 None:intergenic 15.0%
!!! ATTTTTTTTGATATAGTTCA+TGG - chr7_2:17218869-17218888 Msa1050960:intron 15.0%
!!! TTTTTTTTGATATAGTTCAT+GGG - chr7_2:17218870-17218889 Msa1050960:intron 15.0%
!!! ATTTTCATAATTAAACATGT+CGG + chr7_2:17219000-17219019 None:intergenic 15.0%
!!! AAATTTCTAGCATTAATAAT+TGG + chr7_2:17219230-17219249 None:intergenic 15.0%
!! AAATATATCTGTTGAAATTT+GGG + chr7_2:17219880-17219899 None:intergenic 15.0%
!! TAAATATATCTGTTGAAATT+TGG + chr7_2:17219881-17219900 None:intergenic 15.0%
!!! TTATTTGATTTGCTAAAAAA+AGG + chr7_2:17220996-17221015 None:intergenic 15.0%
!! CTTATATTTATCATATATTC+TGG - chr7_2:17221116-17221135 Msa1050960:intron 15.0%
!! GTTAGTTATGTTATGTTTAA+TGG + chr7_2:17214570-17214589 None:intergenic 20.0%
!! AACTACAAAACATCAAAATT+AGG + chr7_2:17215213-17215232 None:intergenic 20.0%
!!! TTTGATGTTTTGTAGTTAAT+TGG - chr7_2:17215216-17215235 Msa1050960:intron 20.0%
!! ATAAACTATGAAGTTATTGA+AGG - chr7_2:17215360-17215379 Msa1050960:intron 20.0%
!! TAAACTATGAAGTTATTGAA+GGG - chr7_2:17215361-17215380 Msa1050960:intron 20.0%
!! TATAAGAGATACTATTAAGA+AGG - chr7_2:17215698-17215717 Msa1050960:intron 20.0%
!! TGTATCAATGATATATTTGA+AGG - chr7_2:17216695-17216714 Msa1050960:intron 20.0%
!! TTACTATATAAATCAAGCAA+GGG - chr7_2:17216882-17216901 Msa1050960:intron 20.0%
!! AAAACTATTTACCATTTCAA+CGG + chr7_2:17216935-17216954 None:intergenic 20.0%
!!! TGACTATAATTTTTTAAGGT+TGG - chr7_2:17217402-17217421 Msa1050960:intron 20.0%
!!! ATTTACAAAGCATTTAAAAG+AGG - chr7_2:17217502-17217521 Msa1050960:intron 20.0%
!! TAATTGAAAATATGCAAGTT+TGG + chr7_2:17217651-17217670 None:intergenic 20.0%
!!! AAACTTGCATATTTTCAATT+AGG - chr7_2:17217650-17217669 Msa1050960:intron 20.0%
!!! TTTTTGCTTAAATATAGAAC+TGG + chr7_2:17218201-17218220 None:intergenic 20.0%
!!! AATGTGTTATTGAAAATAGT+AGG - chr7_2:17218495-17218514 Msa1050960:intron 20.0%
!!! TTTCACATCTAATTATTTTG+AGG - chr7_2:17218799-17218818 Msa1050960:intron 20.0%
!! AATTATCAAATCAGATTTAC+AGG + chr7_2:17218828-17218847 None:intergenic 20.0%
!!! GTAAATCTGATTTGATAATT+TGG - chr7_2:17218828-17218847 Msa1050960:intron 20.0%
!!! TTTTTTTGATATAGTTCATG+GGG - chr7_2:17218871-17218890 Msa1050960:intron 20.0%
!!! GTTTTTAATTCAGTTTTACT+GGG + chr7_2:17218919-17218938 None:intergenic 20.0%
!! TAAAACTGAATTAAAAACCA+AGG - chr7_2:17218921-17218940 Msa1050960:intron 20.0%
!!! TTTTCATAATTAAACATGTC+GGG + chr7_2:17218999-17219018 None:intergenic 20.0%
!! TAAAAAATTTATTGTAGGGT+AGG - chr7_2:17219032-17219051 Msa1050960:intron 20.0%
!! TATTAAAAGCAAAGATTCAT+CGG + chr7_2:17219087-17219106 None:intergenic 20.0%
!!! AGAGTATTGGAAAATAAAAA+CGG + chr7_2:17219133-17219152 None:intergenic 20.0%
!!! TTTTACATCAAAATTTATGG+TGG - chr7_2:17219251-17219270 Msa1050960:CDS 20.0%
!! TTTACATCAAAATTTATGGT+GGG - chr7_2:17219252-17219271 Msa1050960:CDS 20.0%
!!! TTCATTGATTTCTGTATTTA+CGG - chr7_2:17219531-17219550 Msa1050960:CDS 20.0%
!! AATATATCTGTTGAAATTTG+GGG + chr7_2:17219879-17219898 None:intergenic 20.0%
!! ATTTCAACAGATATATTTAC+TGG - chr7_2:17219882-17219901 Msa1050960:intron 20.0%
!!! TTTGTTTTCTTATATATTGC+AGG - chr7_2:17220055-17220074 Msa1050960:CDS 20.0%
!! CAGTTATATTTAAATGAACT+TGG + chr7_2:17220429-17220448 None:intergenic 20.0%
!! TAAATATAACTGAAACAGAT+TGG - chr7_2:17220437-17220456 Msa1050960:CDS 20.0%
!! AAATATAACTGAAACAGATT+GGG - chr7_2:17220438-17220457 Msa1050960:CDS 20.0%
!! TATTGTTACTCATTAAACTA+CGG + chr7_2:17220871-17220890 None:intergenic 20.0%
!!! TTGATTTAAAACTTGATCAT+GGG + chr7_2:17220940-17220959 None:intergenic 20.0%
!!! TTTGATTTAAAACTTGATCA+TGG + chr7_2:17220941-17220960 None:intergenic 20.0%
!! AATATGCAATAGTAATATAG+AGG + chr7_2:17221555-17221574 None:intergenic 20.0%
!!! TTTCAAAGGTATTTACTATT+GGG - chr7_2:17221599-17221618 Msa1050960:intron 20.0%
!!! TGTTTTGGAAGATTTATTAA+AGG - chr7_2:17221766-17221785 Msa1050960:intron 20.0%
!! AAATTATTAACTATGACTGT+AGG + chr7_2:17221912-17221931 None:intergenic 20.0%
!!! GACCAATTTTTCTTTAAATT+TGG - chr7_2:17222064-17222083 Msa1050960:intron 20.0%
!! TGCCAAATTTAAAGAAAAAT+TGG + chr7_2:17222069-17222088 None:intergenic 20.0%
!!! CTTTTTCACATGATTATAAT+AGG + chr7_2:17222505-17222524 None:intergenic 20.0%
! TTAACTCTAATGAGTAAGAA+GGG + chr7_2:17214510-17214529 None:intergenic 25.0%
! TTTAACTCTAATGAGTAAGA+AGG + chr7_2:17214511-17214530 None:intergenic 25.0%
! GTTATGTTATGTTTAATGGT+TGG + chr7_2:17214566-17214585 None:intergenic 25.0%
!!! GTTAATTGGTGATTTTGATT+TGG - chr7_2:17215230-17215249 Msa1050960:intron 25.0%
!!! TTTGATTTTGCTCCTAATTA+AGG - chr7_2:17215253-17215272 Msa1050960:intron 25.0%
! TTCTTCACTAAACCTTAATT+AGG + chr7_2:17215268-17215287 None:intergenic 25.0%
!! GTATCTCTTATAGTTTTTCT+AGG + chr7_2:17215690-17215709 None:intergenic 25.0%
! ATTTATCACAAATTCAACCA+GGG + chr7_2:17215840-17215859 None:intergenic 25.0%
! TATTTATCACAAATTCAACC+AGG + chr7_2:17216142-17216161 None:intergenic 25.0%
!! TCGTGTTATTAAATTGTTAC+CGG + chr7_2:17216367-17216386 None:intergenic 25.0%
! CAACAATGATATTTAATCTC+AGG + chr7_2:17216647-17216666 None:intergenic 25.0%
! GTTACTATATAAATCAAGCA+AGG - chr7_2:17216881-17216900 Msa1050960:intron 25.0%
!! TTTTAGTGCAAAAAATGAGA+AGG - chr7_2:17216951-17216970 Msa1050960:intron 25.0%
!!! ATCAATTTTCTCTATTTCTC+TGG + chr7_2:17217295-17217314 None:intergenic 25.0%
!! TTATTGATGATTTCTACAGA+AGG + chr7_2:17217429-17217448 None:intergenic 25.0%
!!! GGATATTTTTTGGTAAAGTT+AGG + chr7_2:17217469-17217488 None:intergenic 25.0%
!! TTGTAAATTTAGCATTTTGG+CGG + chr7_2:17217490-17217509 None:intergenic 25.0%
!! GCTTTGTAAATTTAGCATTT+TGG + chr7_2:17217493-17217512 None:intergenic 25.0%
!! AAAGAGGCATACAATAATTT+AGG - chr7_2:17217518-17217537 Msa1050960:intron 25.0%
! ACAAATATACTATTGTACTC+TGG + chr7_2:17217555-17217574 None:intergenic 25.0%
! TTTATGGAAATGGAAAACTT+GGG - chr7_2:17217743-17217762 Msa1050960:intron 25.0%
!! AGTGTTTATTAGAAGTTTTG+TGG + chr7_2:17218175-17218194 None:intergenic 25.0%
! TTCACTTTACAATGTAAATG+TGG - chr7_2:17218363-17218382 Msa1050960:intron 25.0%
!! TCACCTCATTTAATTTAAGT+TGG + chr7_2:17218521-17218540 None:intergenic 25.0%
! ACATGTTTACATGATTGATT+TGG - chr7_2:17218709-17218728 Msa1050960:intron 25.0%
!!! TTTTTTGATATAGTTCATGG+GGG - chr7_2:17218872-17218891 Msa1050960:intron 25.0%
!!! GGTTTTTAATTCAGTTTTAC+TGG + chr7_2:17218920-17218939 None:intergenic 25.0%
!!! CTTTTTTTTCAGAGAATCTT+CGG + chr7_2:17219418-17219437 None:intergenic 25.0%
!! AAGATTCTCTGAAAAAAAAG+TGG - chr7_2:17219418-17219437 Msa1050960:intron 25.0%
! AAAAAGATTGAAGAGTTTGA+TGG - chr7_2:17219441-17219460 Msa1050960:intron 25.0%
! ACAGACAAATATATTATCCT+AGG + chr7_2:17219614-17219633 None:intergenic 25.0%
! AATAACAAAATGCATCAACA+TGG + chr7_2:17219641-17219660 None:intergenic 25.0%
!!! CATTTTGTTATTGATATCGT+TGG - chr7_2:17219649-17219668 Msa1050960:intron 25.0%
!!! TTGATTTGCTAAAAAAAGGT+TGG + chr7_2:17220992-17221011 None:intergenic 25.0%
!!! TTTATCATATATTCTGGTTC+AGG - chr7_2:17221122-17221141 Msa1050960:intron 25.0%
!!! ACAGATTCAATAGTTTTGTT+AGG + chr7_2:17221458-17221477 None:intergenic 25.0%
!!! GTTTCAAAGGTATTTACTAT+TGG - chr7_2:17221598-17221617 Msa1050960:intron 25.0%
!!! TTCAAAGGTATTTACTATTG+GGG - chr7_2:17221600-17221619 Msa1050960:intron 25.0%
! ATCATTTACTGCATTAGAAT+AGG + chr7_2:17221649-17221668 None:intergenic 25.0%
! TTAATCTTGTCCATATTAGA+CGG - chr7_2:17221792-17221811 Msa1050960:intron 25.0%
! AATTCATTTATAGGTGTCAA+AGG - chr7_2:17221936-17221955 Msa1050960:intron 25.0%
! AAGCTTCAAACAAATTATCA+AGG + chr7_2:17222006-17222025 None:intergenic 25.0%
! GATATTTGATATAATGATGC+AGG - chr7_2:17222039-17222058 Msa1050960:intron 25.0%
! ATAGTTATCAAAGAAGAGAT+TGG + chr7_2:17222366-17222385 None:intergenic 25.0%
! AATCTAAAAAAATCAACAGG+TGG + chr7_2:17222783-17222802 None:intergenic 25.0%
TAACTCTAATGAGTAAGAAG+GGG + chr7_2:17214509-17214528 None:intergenic 30.0%
ATAACTAACTAACTCGATCT+CGG - chr7_2:17214581-17214600 Msa1050960:CDS 30.0%
TCTAATTAGTGACTCGTTAT+TGG - chr7_2:17214640-17214659 Msa1050960:intron 30.0%
AGTTAAAAAAACTCGGTATC+CGG + chr7_2:17214667-17214686 None:intergenic 30.0%
CATTACTGTATTGTAATCAC+TGG - chr7_2:17215289-17215308 Msa1050960:intron 30.0%
TATGAAGTTATTGAAGGGAA+GGG - chr7_2:17215366-17215385 Msa1050960:intron 30.0%
! AAGGGAAGGGAAAATTTTAT+CGG - chr7_2:17215379-17215398 Msa1050960:intron 30.0%
ATGACAACATTAGAGAGAAT+TGG - chr7_2:17215538-17215557 Msa1050960:CDS 30.0%
TGACAACATTAGAGAGAATT+GGG - chr7_2:17215539-17215558 Msa1050960:CDS 30.0%
! AGATTAATGAGTTGGAGAAA+TGG - chr7_2:17215727-17215746 Msa1050960:intron 30.0%
TCTATAAACTTCACTCTCTT+TGG - chr7_2:17215912-17215931 Msa1050960:intron 30.0%
!! CACAAAGTGTTGTTAAATAG+CGG - chr7_2:17216017-17216036 Msa1050960:CDS 30.0%
TTGCAGAATGCAAAATATAG+TGG + chr7_2:17216079-17216098 None:intergenic 30.0%
ATTGGACGATTCTTAATCTA+AGG + chr7_2:17216113-17216132 None:intergenic 30.0%
!! AATTTTCCTGGTTCTTCATT+GGG - chr7_2:17216301-17216320 Msa1050960:intron 30.0%
ACTATGTAGCATCATAACTT+CGG + chr7_2:17216458-17216477 None:intergenic 30.0%
TTTCTATCTCACAACAAAGT+CGG + chr7_2:17216493-17216512 None:intergenic 30.0%
TGAATGGTTGAGATAATTAG+TGG - chr7_2:17216758-17216777 Msa1050960:intron 30.0%
GAATGGTTGAGATAATTAGT+GGG - chr7_2:17216759-17216778 Msa1050960:intron 30.0%
TATAGTAACAGAGACGTTTA+TGG + chr7_2:17216870-17216889 None:intergenic 30.0%
AGCTGTTTATTCTACTGTTA+AGG - chr7_2:17216975-17216994 Msa1050960:intron 30.0%
GCTGTTTATTCTACTGTTAA+GGG - chr7_2:17216976-17216995 Msa1050960:intron 30.0%
GAGGGAAAAGAATATTAGAA+AGG - chr7_2:17217038-17217057 Msa1050960:CDS 30.0%
AGTAATTGCCTGAAGTAATA+GGG + chr7_2:17217241-17217260 None:intergenic 30.0%
ATATACTATTGTACTCTGGT+TGG + chr7_2:17217551-17217570 None:intergenic 30.0%
! AGTTTTCCATTTCCATAAAG+TGG + chr7_2:17217742-17217761 None:intergenic 30.0%
CTTTATGGAAATGGAAAACT+TGG - chr7_2:17217742-17217761 Msa1050960:intron 30.0%
TTATGGAAATGGAAAACTTG+GGG - chr7_2:17217744-17217763 Msa1050960:CDS 30.0%
!!! CTTAGACTGAATAGTTTTGT+CGG - chr7_2:17217827-17217846 Msa1050960:CDS 30.0%
AATTGAACGAGAAGTAACAT+CGG + chr7_2:17217999-17218018 None:intergenic 30.0%
! ATGTTACTTCTCGTTCAATT+GGG - chr7_2:17217999-17218018 Msa1050960:intron 30.0%
!! GTTTATTAGAAGTTTTGTGG+TGG + chr7_2:17218172-17218191 None:intergenic 30.0%
TTGCTTAAATATAGAACTGG+AGG + chr7_2:17218198-17218217 None:intergenic 30.0%
TAATAACTGAACACAGACAA+GGG + chr7_2:17218307-17218326 None:intergenic 30.0%
AGGCCAACTTAAATTAAATG+AGG - chr7_2:17218515-17218534 Msa1050960:intron 30.0%
! TTTATGCTTCTGTTTGAAAC+CGG - chr7_2:17218602-17218621 Msa1050960:intron 30.0%
ACAAGTGTTCATAATTTCCT+TGG + chr7_2:17218941-17218960 None:intergenic 30.0%
TCCAATACTCTTCAAGAATT+AGG - chr7_2:17219142-17219161 Msa1050960:intron 30.0%
! TCCTAATTCTTGAAGAGTAT+TGG + chr7_2:17219146-17219165 None:intergenic 30.0%
! TGTATGAGTTGGAAGAAAAA+AGG - chr7_2:17219174-17219193 Msa1050960:intron 30.0%
ATAATTGGATAGAACAGAAC+AGG + chr7_2:17219215-17219234 None:intergenic 30.0%
GAATACATGTAAGTATAAGC+TGG + chr7_2:17219284-17219303 None:intergenic 30.0%
ATGTATTCAGCTAGATGTTT+GGG - chr7_2:17219296-17219315 Msa1050960:CDS 30.0%
GGATAATATATTTGTCTGTG+TGG - chr7_2:17219615-17219634 Msa1050960:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr7_2:17219808-17219827 Msa1050960:intron 30.0%
ACTAGAAATATCCATTGTCT+AGG + chr7_2:17219911-17219930 None:intergenic 30.0%
AGGGAAAAATAATGTGTTGT+TGG + chr7_2:17220001-17220020 None:intergenic 30.0%
!!! AAGAAGTGTCTGCTTTTTAT+CGG - chr7_2:17220198-17220217 Msa1050960:CDS 30.0%
! ATTAGAGCATTATAAACCTG+TGG + chr7_2:17220260-17220279 None:intergenic 30.0%
ATTCAGATGAAACTGAAAGA+AGG - chr7_2:17220501-17220520 Msa1050960:intron 30.0%
CTGAAAGAAGGAAAATACAA+CGG - chr7_2:17220513-17220532 Msa1050960:intron 30.0%
TGAAAGAAGGAAAATACAAC+GGG - chr7_2:17220514-17220533 Msa1050960:intron 30.0%
GTATCTTGAGCTTTCATATT+TGG + chr7_2:17220558-17220577 None:intergenic 30.0%
! GGAAATTACTGAGGATTTTT+CGG - chr7_2:17220729-17220748 Msa1050960:intron 30.0%
CTCGTTCTCAAAAATGTATT+GGG + chr7_2:17221021-17221040 None:intergenic 30.0%
ATATCAGACATCTATGATAG+GGG + chr7_2:17221366-17221385 None:intergenic 30.0%
CATATCAGACATCTATGATA+GGG + chr7_2:17221367-17221386 None:intergenic 30.0%
TAGAGGACAAATATTGAGTA+AGG + chr7_2:17221538-17221557 None:intergenic 30.0%
ACTTACAAACGTAGTTTCAA+AGG - chr7_2:17221585-17221604 Msa1050960:intron 30.0%
!! TCAAAGGTATTTACTATTGG+GGG - chr7_2:17221601-17221620 Msa1050960:intron 30.0%
! AAATGATTTTCTTAATGCGC+AGG - chr7_2:17221662-17221681 Msa1050960:intron 30.0%
TAATCTTGTCCATATTAGAC+GGG - chr7_2:17221793-17221812 Msa1050960:intron 30.0%
TATTAACTATGACTGTAGGT+AGG + chr7_2:17221908-17221927 None:intergenic 30.0%
!! AATTTCCAGCACTGTTTTAA+GGG + chr7_2:17222232-17222251 None:intergenic 30.0%
! AAATTTCCAGCACTGTTTTA+AGG + chr7_2:17222233-17222252 None:intergenic 30.0%
CAATTTGATATGCAATCTCT+TGG - chr7_2:17222334-17222353 Msa1050960:CDS 30.0%
TGCAATGTAAGACTAGAAAT+GGG + chr7_2:17222396-17222415 None:intergenic 30.0%
TTGCAATGTAAGACTAGAAA+TGG + chr7_2:17222397-17222416 None:intergenic 30.0%
TAGAATTGTAATGCACCTAA+AGG - chr7_2:17222562-17222581 Msa1050960:five_prime_UTR 30.0%
AGAATTGTAATGCACCTAAA+GGG - chr7_2:17222563-17222582 Msa1050960:five_prime_UTR 30.0%
GAGAAAATTTAAGTCCCTTT+AGG + chr7_2:17222580-17222599 None:intergenic 30.0%
AAAGTAAATGCTTGAAGTAC+TGG + chr7_2:17222688-17222707 None:intergenic 30.0%
AGTACTTCAAGCATTTACTT+TGG - chr7_2:17222687-17222706 Msa1050960:five_prime_UTR 30.0%
GTACTTCAAGCATTTACTTT+GGG - chr7_2:17222688-17222707 Msa1050960:five_prime_UTR 30.0%
GGGAATCTAAAAAAATCAAC+AGG + chr7_2:17222786-17222805 None:intergenic 30.0%
TTTGTCTTGTGTTGAGTAGA+GGG + chr7_2:17214426-17214445 None:intergenic 35.0%
ATCTTTCTGATGTGATGATC+CGG + chr7_2:17214469-17214488 None:intergenic 35.0%
TAAGAAGGGGTTATTCTCTT+TGG + chr7_2:17214496-17214515 None:intergenic 35.0%
TTAATGGTTGGATCTGATAC+TGG + chr7_2:17214554-17214573 None:intergenic 35.0%
CACTAATTAGACTGTGTATC+CGG + chr7_2:17214631-17214650 None:intergenic 35.0%
GAATGGCTTCACAAAGAAAT+GGG - chr7_2:17214780-17214799 Msa1050960:CDS 35.0%
GAATGTGAGGAGGAATATTA+CGG - chr7_2:17214950-17214969 Msa1050960:intron 35.0%
CTATGAAGTTATTGAAGGGA+AGG - chr7_2:17215365-17215384 Msa1050960:intron 35.0%
GACAACATTAGAGAGAATTG+GGG - chr7_2:17215540-17215559 Msa1050960:CDS 35.0%
GAATTGGGGTATAGAAAAGA+TGG - chr7_2:17215554-17215573 Msa1050960:CDS 35.0%
AGATGGTAGAAACTAGACTT+AGG - chr7_2:17215571-17215590 Msa1050960:intron 35.0%
GCATATAGATAGAAGAACTG+TGG - chr7_2:17215602-17215621 Msa1050960:intron 35.0%
! GAACTGTGGATTTTGTAGTT+AGG - chr7_2:17215616-17215635 Msa1050960:intron 35.0%
AGTTAGGAGAGTAGATTAGA+TGG - chr7_2:17215632-17215651 Msa1050960:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG - chr7_2:17215719-17215738 Msa1050960:intron 35.0%
TATGTATCCGATTCACTTAG+TGG - chr7_2:17215781-17215800 Msa1050960:intron 35.0%
ATGTATCCGATTCACTTAGT+GGG - chr7_2:17215782-17215801 Msa1050960:intron 35.0%
TCTTATCCCACTAAGTGAAT+CGG + chr7_2:17215791-17215810 None:intergenic 35.0%
GGTTTAGTGTTGTCATATAG+CGG - chr7_2:17215933-17215952 Msa1050960:intron 35.0%
ACAGTGCATCATGAAACAAT+GGG + chr7_2:17215993-17216012 None:intergenic 35.0%
AACAGTGCATCATGAAACAA+TGG + chr7_2:17215994-17216013 None:intergenic 35.0%
!! GAATTTTCCTGGTTCTTCAT+TGG - chr7_2:17216300-17216319 Msa1050960:intron 35.0%
GCAAAAAGATGAATAAGCCA+TGG - chr7_2:17216323-17216342 Msa1050960:intron 35.0%
CTGAATGTTATTACATGTGC+CGG - chr7_2:17216393-17216412 Msa1050960:intron 35.0%
TGGTAGTCGAAACTAAAAAC+TGG - chr7_2:17216535-17216554 Msa1050960:intron 35.0%
ATCACCTTGATTATTGTCGT+AGG - chr7_2:17216584-17216603 Msa1050960:intron 35.0%
TATGCCTACGACAATAATCA+AGG + chr7_2:17216591-17216610 None:intergenic 35.0%
TTATTGTCGTAGGCATATTG+TGG - chr7_2:17216594-17216613 Msa1050960:intron 35.0%
! TAATGAACGTGTCATTGTTC+TGG - chr7_2:17216732-17216751 Msa1050960:intron 35.0%
! TCTAATATTCTTTTCCCTCG+TGG + chr7_2:17217037-17217056 None:intergenic 35.0%
TGAATCTCTTGTAGCTTACA+TGG - chr7_2:17217065-17217084 Msa1050960:CDS 35.0%
ATAACTGTTCTAACCTCATC+CGG + chr7_2:17217195-17217214 None:intergenic 35.0%
GTAATTGCCTGAAGTAATAG+GGG + chr7_2:17217240-17217259 None:intergenic 35.0%
CAGTAATTGCCTGAAGTAAT+AGG + chr7_2:17217242-17217261 None:intergenic 35.0%
!! GCATTTTGGCGGATATTTTT+TGG + chr7_2:17217479-17217498 None:intergenic 35.0%
CAGTATCCACTTTATGGAAA+TGG - chr7_2:17217733-17217752 Msa1050960:intron 35.0%
GAATAAAGACCTGTCTTTCA+AGG + chr7_2:17217804-17217823 None:intergenic 35.0%
CGACAAAACTATTCAGTCTA+AGG + chr7_2:17217829-17217848 None:intergenic 35.0%
TGTGAACAGAGATACAACAT+TGG + chr7_2:17217872-17217891 None:intergenic 35.0%
AAACTTATGAAACGTCTGCA+TGG - chr7_2:17217968-17217987 Msa1050960:intron 35.0%
! GATGTTACTTCTCGTTCAAT+TGG - chr7_2:17217998-17218017 Msa1050960:intron 35.0%
! AAGACTTCCAACATTTTGAG+AGG + chr7_2:17218035-17218054 None:intergenic 35.0%
CTAATAACTGAACACAGACA+AGG + chr7_2:17218308-17218327 None:intergenic 35.0%
TGTGAATTAACGATGTTCAG+TGG - chr7_2:17218336-17218355 Msa1050960:intron 35.0%
!! AGACCTTTATGCTCTGAAAT+GGG - chr7_2:17218402-17218421 Msa1050960:intron 35.0%
CAAGAAGAAGATAAGATGGA+CGG + chr7_2:17218437-17218456 None:intergenic 35.0%
CTTCCAAGAAGAAGATAAGA+TGG + chr7_2:17218441-17218460 None:intergenic 35.0%
CTTATCTTCTTCTTGGAAGA+TGG - chr7_2:17218442-17218461 Msa1050960:intron 35.0%
GACAATGTCTGAATAAACAC+TGG + chr7_2:17218652-17218671 None:intergenic 35.0%
! GGATTTTCTACTGTATGAGT+TGG - chr7_2:17219163-17219182 Msa1050960:intron 35.0%
CATGTATTCAGCTAGATGTT+TGG - chr7_2:17219295-17219314 Msa1050960:CDS 35.0%
!! AAGAGAAGTTGCTGGTTTAA+AGG - chr7_2:17219326-17219345 Msa1050960:CDS 35.0%
! TTTAAGAAGTGCGGTGTATA+TGG + chr7_2:17219487-17219506 None:intergenic 35.0%
!! CGTATTTGCTTTAAGAAGTG+CGG + chr7_2:17219496-17219515 None:intergenic 35.0%
CGCACTTCTTAAAGCAAATA+CGG - chr7_2:17219494-17219513 Msa1050960:CDS 35.0%
GGTAATAATGGTTCCTTGTT+TGG - chr7_2:17219586-17219605 Msa1050960:intron 35.0%
ATTATCCTAGGATCCAAACA+AGG + chr7_2:17219602-17219621 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr7_2:17219811-17219830 Msa1050960:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr7_2:17219855-17219874 None:intergenic 35.0%
AAATGAATACCATTAAGGCC+TGG + chr7_2:17219956-17219975 None:intergenic 35.0%
GAGGGAAATGAATACCATTA+AGG + chr7_2:17219961-17219980 None:intergenic 35.0%
TGAGACTTCAAATAGTGCAA+AGG - chr7_2:17220163-17220182 Msa1050960:CDS 35.0%
TTATAAACCTGTGGTGAAGA+AGG + chr7_2:17220251-17220270 None:intergenic 35.0%
!! GACACAATGTTCTGAGTTTT+TGG - chr7_2:17220313-17220332 Msa1050960:CDS 35.0%
!! ATGTTCTGAGTTTTTGGATC+AGG - chr7_2:17220319-17220338 Msa1050960:CDS 35.0%
!! TGTTCTGAGTTTTTGGATCA+GGG - chr7_2:17220320-17220339 Msa1050960:CDS 35.0%
!! TCTTTATGGAGGTGTACTTT+TGG + chr7_2:17220348-17220367 None:intergenic 35.0%
ACCTCCATAAAGATGCTTTA+TGG - chr7_2:17220355-17220374 Msa1050960:CDS 35.0%
! TCCATAAAGCATCTTTATGG+AGG + chr7_2:17220359-17220378 None:intergenic 35.0%
TCCATAAAGATGCTTTATGG+AGG - chr7_2:17220358-17220377 Msa1050960:CDS 35.0%
! ACCTCCATAAAGCATCTTTA+TGG + chr7_2:17220362-17220381 None:intergenic 35.0%
TGGAAACTATGACTACCAAA+CGG + chr7_2:17220409-17220428 None:intergenic 35.0%
GAAAGAAGGAAAATACAACG+GGG - chr7_2:17220515-17220534 Msa1050960:intron 35.0%
AAAGAAGGAAAATACAACGG+GGG - chr7_2:17220516-17220535 Msa1050960:intron 35.0%
TGAAAGCTCAAGATACAATG+AGG - chr7_2:17220562-17220581 Msa1050960:intron 35.0%
! CAGTGTAATTTTTGCGTATC+AGG - chr7_2:17220600-17220619 Msa1050960:intron 35.0%
CCTAGACTTCTTATAGGATA+GGG + chr7_2:17220667-17220686 None:intergenic 35.0%
TCCTAGACTTCTTATAGGAT+AGG + chr7_2:17220668-17220687 None:intergenic 35.0%
CCTCGTTCTCAAAAATGTAT+TGG + chr7_2:17221022-17221041 None:intergenic 35.0%
!! CCAATACATTTTTGAGAACG+AGG - chr7_2:17221019-17221038 Msa1050960:intron 35.0%
! TGAGAACGAGGAACTTTTAA+TGG - chr7_2:17221031-17221050 Msa1050960:intron 35.0%
TGCAAATGCAGAAATAAGTG+CGG - chr7_2:17221194-17221213 Msa1050960:intron 35.0%
ATTATTGTTCATGCGCTGAA+AGG - chr7_2:17221318-17221337 Msa1050960:intron 35.0%
CCATATCAGACATCTATGAT+AGG + chr7_2:17221368-17221387 None:intergenic 35.0%
CCTATCATAGATGTCTGATA+TGG - chr7_2:17221365-17221384 Msa1050960:intron 35.0%
ATCATAGATGTCTGATATGG+AGG - chr7_2:17221368-17221387 Msa1050960:intron 35.0%
!!! GATGGAAGTTCTTGTTGTTT+TGG - chr7_2:17221400-17221419 Msa1050960:intron 35.0%
AAAGTAGGCATGATTCAACA+AGG + chr7_2:17221840-17221859 None:intergenic 35.0%
ATAGTCCTGTTGAACAAAGT+AGG + chr7_2:17221855-17221874 None:intergenic 35.0%
TTGTTCAACAGGACTATGAA+AGG - chr7_2:17221858-17221877 Msa1050960:intron 35.0%
AGGTTTGAATCTGAAAGAGA+TGG + chr7_2:17221986-17222005 None:intergenic 35.0%
TGGAAGCTTGCAAATATGTT+TGG - chr7_2:17222165-17222184 Msa1050960:CDS 35.0%
GGAAGCTTGCAAATATGTTT+GGG - chr7_2:17222166-17222185 Msa1050960:CDS 35.0%
GAAGCTTGCAAATATGTTTG+GGG - chr7_2:17222167-17222186 Msa1050960:CDS 35.0%
TTGCAAATATGTTTGGGGAT+TGG - chr7_2:17222172-17222191 Msa1050960:CDS 35.0%
! AAAACAGTGCTGGAAATTTC+AGG - chr7_2:17222234-17222253 Msa1050960:CDS 35.0%
GCTTCTAACATGTTATGATC+AGG - chr7_2:17222524-17222543 Msa1050960:five_prime_UTR 35.0%
GGGAATTGTTTAGACAATCT+GGG + chr7_2:17222607-17222626 None:intergenic 35.0%
TGGGAATTGTTTAGACAATC+TGG + chr7_2:17222608-17222627 None:intergenic 35.0%
TTCAATGTCGATAGCAAAGT+GGG + chr7_2:17222627-17222646 None:intergenic 35.0%
! TTCAAGCATTTACTTTGGGA+TGG - chr7_2:17222692-17222711 Msa1050960:five_prime_UTR 35.0%
AGGTTTCTTTCTTGTTCTTG+GGG + chr7_2:17222755-17222774 None:intergenic 35.0%
GAGGTTTCTTTCTTGTTCTT+GGG + chr7_2:17222756-17222775 None:intergenic 35.0%
AGAGGTTTCTTTCTTGTTCT+TGG + chr7_2:17222757-17222776 None:intergenic 35.0%
CTAAAAAAATCAACAGGTGG+AGG + chr7_2:17222780-17222799 None:intergenic 35.0%
! ACACTTCTGAAGAGAAAGAA+GGG + chr7_2:17222808-17222827 None:intergenic 35.0%
GTTGAGTAGAGGGAAATTGT+TGG + chr7_2:17214416-17214435 None:intergenic 40.0%
CTTTGTCTTGTGTTGAGTAG+AGG + chr7_2:17214427-17214446 None:intergenic 40.0%
ACAACACCAACAACAAACAC+CGG - chr7_2:17214447-17214466 Msa1050960:CDS 40.0%
TTAGTGACTCGTTATTGGAC+CGG - chr7_2:17214645-17214664 Msa1050960:intron 40.0%
ACGAGTTTAACTCAGTGACT+CGG + chr7_2:17214702-17214721 None:intergenic 40.0%
CGAATGGCTTCACAAAGAAA+TGG - chr7_2:17214779-17214798 Msa1050960:CDS 40.0%
GTTACGAGGAAATTCCATAC+CGG + chr7_2:17214903-17214922 None:intergenic 40.0%
AGGAGGAATATTACGGTTCA+CGG - chr7_2:17214957-17214976 Msa1050960:intron 40.0%
AATATTACGGTTCACGGTGA+AGG - chr7_2:17214963-17214982 Msa1050960:intron 40.0%
ATATTACGGTTCACGGTGAA+GGG - chr7_2:17214964-17214983 Msa1050960:intron 40.0%
! GGGAAAATTTTATCGGACAG+TGG - chr7_2:17215386-17215405 Msa1050960:CDS 40.0%
AGTTAAGCGTAACAGAGATG+AGG - chr7_2:17215469-17215488 Msa1050960:CDS 40.0%
TGGTAGAAACTAGACTTAGG+TGG - chr7_2:17215574-17215593 Msa1050960:intron 40.0%
AAACTAGACTTAGGTGGTCT+GGG - chr7_2:17215580-17215599 Msa1050960:intron 40.0%
TAGGAGAGTAGATTAGATGG+AGG - chr7_2:17215635-17215654 Msa1050960:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG - chr7_2:17215636-17215655 Msa1050960:intron 40.0%
TCACTTAGTGGGATAAGACT+TGG - chr7_2:17215793-17215812 Msa1050960:intron 40.0%
TTCAACCAGTGATTGCACTA+CGG + chr7_2:17215828-17215847 None:intergenic 40.0%
ATCACAAATTCAACCAGGGA+TGG + chr7_2:17216137-17216156 None:intergenic 40.0%
CTCTCCATAGATGAGTCAAA+TGG - chr7_2:17216243-17216262 Msa1050960:intron 40.0%
GGAACCATTTGACTCATCTA+TGG + chr7_2:17216250-17216269 None:intergenic 40.0%
! CAAGTGCTACTAACAACACA+AGG + chr7_2:17216271-17216290 None:intergenic 40.0%
! CTTGTGTTGTTAGTAGCACT+TGG - chr7_2:17216269-17216288 Msa1050960:intron 40.0%
TTAGTAGCACTTGGTTGAAG+TGG - chr7_2:17216278-17216297 Msa1050960:intron 40.0%
! TGGTTGAAGTGGAATTTTCC+TGG - chr7_2:17216289-17216308 Msa1050960:intron 40.0%
! TTTTTGCCCAATGAAGAACC+AGG + chr7_2:17216310-17216329 None:intergenic 40.0%
! CTTCGGATTGAAAGCATGTT+CGG + chr7_2:17216441-17216460 None:intergenic 40.0%
!!! GAAAGAACACTTTTTCCTGC+TGG - chr7_2:17216509-17216528 Msa1050960:intron 40.0%
! GTCATTGTTCTGGCATTGAA+TGG - chr7_2:17216742-17216761 Msa1050960:intron 40.0%
TTCTCGAAGCTTCATCACAT+TGG + chr7_2:17216834-17216853 None:intergenic 40.0%
TCATTGTCATTGAAACCACG+AGG - chr7_2:17217019-17217038 Msa1050960:CDS 40.0%
CATTGTCATTGAAACCACGA+GGG - chr7_2:17217020-17217039 Msa1050960:CDS 40.0%
! AGTTCTTTTCCTGCTTACGA+AGG - chr7_2:17217102-17217121 Msa1050960:CDS 40.0%
!! AAGCTGGGGTTTGATTTTGA+TGG - chr7_2:17217162-17217181 Msa1050960:CDS 40.0%
!! AGCTGGGGTTTGATTTTGAT+GGG - chr7_2:17217163-17217182 Msa1050960:CDS 40.0%
!! TGATTTTGATGGGCAGATTC+CGG - chr7_2:17217173-17217192 Msa1050960:intron 40.0%
ATGGATGTTTCCTCTTCTGA+TGG - chr7_2:17217697-17217716 Msa1050960:intron 40.0%
TGGATGTTTCCTCTTCTGAT+GGG - chr7_2:17217698-17217717 Msa1050960:intron 40.0%
CCATAAAGTGGATACTGTAG+AGG + chr7_2:17217730-17217749 None:intergenic 40.0%
CCTCTACAGTATCCACTTTA+TGG - chr7_2:17217727-17217746 Msa1050960:intron 40.0%
AAATCAGCTCCTTGAAAGAC+AGG - chr7_2:17217792-17217811 Msa1050960:CDS 40.0%
! AGCTCATGTTCAGCAGTTTT+TGG - chr7_2:17217895-17217914 Msa1050960:CDS 40.0%
TAAACAATGCTGCAGAAGCA+AGG - chr7_2:17217933-17217952 Msa1050960:CDS 40.0%
AAACAATGCTGCAGAAGCAA+GGG - chr7_2:17217934-17217953 Msa1050960:CDS 40.0%
ACTTCTCGTTCAATTGGGAT+TGG - chr7_2:17218004-17218023 Msa1050960:intron 40.0%
!! ACTTCCAACATTTTGAGAGG+TGG + chr7_2:17218032-17218051 None:intergenic 40.0%
TGGAAGTCTTAGACAACTTC+AGG - chr7_2:17218045-17218064 Msa1050960:intron 40.0%
!! AGAAGTTTTGTGGTGGTAGT+AGG + chr7_2:17218165-17218184 None:intergenic 40.0%
AACACAGACAAGGGTAATTC+GGG + chr7_2:17218298-17218317 None:intergenic 40.0%
GAACACAGACAAGGGTAATT+CGG + chr7_2:17218299-17218318 None:intergenic 40.0%
!! CAGACCTTTATGCTCTGAAA+TGG - chr7_2:17218401-17218420 Msa1050960:intron 40.0%
CTTCCCATTTCAGAGCATAA+AGG + chr7_2:17218408-17218427 None:intergenic 40.0%
CGTCCATCTTATCTTCTTCT+TGG - chr7_2:17218435-17218454 Msa1050960:intron 40.0%
CAACTATTAGTTACTCCCTC+CGG + chr7_2:17218624-17218643 None:intergenic 40.0%
GACATTGTCTTAAGCTGCTT+TGG - chr7_2:17218663-17218682 Msa1050960:intron 40.0%
ATAGTTCATGGGGGAAGATT+AGG - chr7_2:17218881-17218900 Msa1050960:intron 40.0%
GCGTTGTATTTCAGACATCA+AGG + chr7_2:17219364-17219383 None:intergenic 40.0%
TGAATAAGTTATGTGCCGAG+AGG - chr7_2:17219385-17219404 Msa1050960:intron 40.0%
TGTACTTATTGCCAAGCCTT+GGG - chr7_2:17219565-17219584 Msa1050960:CDS 40.0%
AACCATTATTACCCAAGGCT+TGG + chr7_2:17219579-17219598 None:intergenic 40.0%
CAAGGAACCATTATTACCCA+AGG + chr7_2:17219584-17219603 None:intergenic 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr7_2:17219669-17219688 Msa1050960:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG + chr7_2:17219709-17219728 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - chr7_2:17219751-17219770 Msa1050960:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - chr7_2:17219752-17219771 Msa1050960:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr7_2:17219853-17219872 Msa1050960:intron 40.0%
! TTTACTGGCTACCTAGACAA+TGG - chr7_2:17219897-17219916 Msa1050960:intron 40.0%
AGCATGTAGAGGCTATTATC+TGG + chr7_2:17220227-17220246 None:intergenic 40.0%
!! GCTTTATGGAGGTGTACTTT+TGG - chr7_2:17220369-17220388 Msa1050960:CDS 40.0%
GATCTTCCATTTCTACCGTT+TGG - chr7_2:17220391-17220410 Msa1050960:CDS 40.0%
TGACTACCAAACGGTAGAAA+TGG + chr7_2:17220400-17220419 None:intergenic 40.0%
AAGAAGGAAAATACAACGGG+GGG - chr7_2:17220517-17220536 Msa1050960:intron 40.0%
CCCTATCCTATAAGAAGTCT+AGG - chr7_2:17220664-17220683 Msa1050960:intron 40.0%
CTTGCTCCTAGACTTCTTAT+AGG + chr7_2:17220673-17220692 None:intergenic 40.0%
TCCTCTGATTATTCTGCAAG+AGG - chr7_2:17220759-17220778 Msa1050960:intron 40.0%
TCTGATTATTCTGCAAGAGG+CGG - chr7_2:17220762-17220781 Msa1050960:intron 40.0%
AAAGTTGCATGTGAGAGAAG+TGG - chr7_2:17220785-17220804 Msa1050960:intron 40.0%
ACAGAGCAAAACAAGGGATA+CGG + chr7_2:17220917-17220936 None:intergenic 40.0%
CATATTGATGGAATTGCCGA+CGG + chr7_2:17221252-17221271 None:intergenic 40.0%
CGGCAATTCCATCAATATGT+CGG - chr7_2:17221253-17221272 Msa1050960:intron 40.0%
GGCAATTCCATCAATATGTC+GGG - chr7_2:17221254-17221273 Msa1050960:intron 40.0%
AACAACAAGAACTTCCATCC+TGG + chr7_2:17221399-17221418 None:intergenic 40.0%
! ATTTTCTTAATGCGCAGGCT+TGG - chr7_2:17221667-17221686 Msa1050960:intron 40.0%
ACGTTTCAAGCAAAACTCCA+GGG + chr7_2:17221729-17221748 None:intergenic 40.0%
! TGGTTCAGAAGCTAGTGTTT+TGG - chr7_2:17221751-17221770 Msa1050960:intron 40.0%
TCATGCCTACTTTGTTCAAC+AGG - chr7_2:17221847-17221866 Msa1050960:intron 40.0%
TATGACTGTAGGTAGGATTC+GGG + chr7_2:17221901-17221920 None:intergenic 40.0%
CTATGACTGTAGGTAGGATT+CGG + chr7_2:17221902-17221921 None:intergenic 40.0%
AGAACAAGAAAGAGCTGTCA+CGG - chr7_2:17222091-17222110 Msa1050960:CDS 40.0%
AAAGAGCTGTCACGGAAAAA+TGG - chr7_2:17222099-17222118 Msa1050960:CDS 40.0%
AAAACACCAGTCTTGAGTTC+AGG + chr7_2:17222128-17222147 None:intergenic 40.0%
TTTGAATGCTCAGCAGAGTT+TGG - chr7_2:17222145-17222164 Msa1050960:CDS 40.0%
GATATCCCTTAAAACAGTGC+TGG - chr7_2:17222224-17222243 Msa1050960:CDS 40.0%
CTTCAATGTCGATAGCAAAG+TGG + chr7_2:17222628-17222647 None:intergenic 40.0%
TTCTTGTTCTTGGGGTTTCT+TGG + chr7_2:17222747-17222766 None:intergenic 40.0%
! ACTTCTGAAGAGAAAGAAGG+GGG + chr7_2:17222806-17222825 None:intergenic 40.0%
! CACTTCTGAAGAGAAAGAAG+GGG + chr7_2:17222807-17222826 None:intergenic 40.0%
! CACACTTCTGAAGAGAAAGA+AGG + chr7_2:17222809-17222828 None:intergenic 40.0%
!! GATGATCCGGTGTTTGTTGT+TGG + chr7_2:17214456-17214475 None:intergenic 45.0%
TTGGATCTGATACTGGATGG+TGG + chr7_2:17214547-17214566 None:intergenic 45.0%
TGGTTGGATCTGATACTGGA+TGG + chr7_2:17214550-17214569 None:intergenic 45.0%
TAGACTGTGTATCCGGTATC+CGG + chr7_2:17214624-17214643 None:intergenic 45.0%
AGCCATTCGAGTATCACTTC+CGG + chr7_2:17214768-17214787 None:intergenic 45.0%
GAAATGGGATACAGACCACT+CGG - chr7_2:17214795-17214814 Msa1050960:CDS 45.0%
!! TTTCGGATCGATTCGACTGA+CGG + chr7_2:17214858-17214877 None:intergenic 45.0%
AGAAGACGGTTAGGAATGTG+AGG - chr7_2:17214937-17214956 Msa1050960:intron 45.0%
TATTACGGTTCACGGTGAAG+GGG - chr7_2:17214965-17214984 Msa1050960:intron 45.0%
AGGAAGAAGGAGAAGAGAGA+AGG - chr7_2:17214999-17215018 Msa1050960:intron 45.0%
GGAAGAAGGAGAAGAGAGAA+GGG - chr7_2:17215000-17215019 Msa1050960:intron 45.0%
GAAGAAGGAGAAGAGAGAAG+GGG - chr7_2:17215001-17215020 Msa1050960:intron 45.0%
AGAGGTTGAGGAATGTTGTG+AGG - chr7_2:17215075-17215094 Msa1050960:CDS 45.0%
AGAGGAAGGATTTGAAAGCG+AGG - chr7_2:17215102-17215121 Msa1050960:CDS 45.0%
TTTGAAAGCGAGGATGCTAG+AGG - chr7_2:17215112-17215131 Msa1050960:CDS 45.0%
GGAAGAGGATGCTTGATGAA+CGG - chr7_2:17215156-17215175 Msa1050960:CDS 45.0%
GAAGAGGATGCTTGATGAAC+GGG - chr7_2:17215157-17215176 Msa1050960:CDS 45.0%
TTGATGAACGGGCGAATTAC+AGG - chr7_2:17215168-17215187 Msa1050960:CDS 45.0%
! AACGGGCGAATTACAGGTTT+TGG - chr7_2:17215174-17215193 Msa1050960:CDS 45.0%
TTATCGGACAGTGGTAAGAC+TGG - chr7_2:17215395-17215414 Msa1050960:CDS 45.0%
CGCTTAACTTATGTTCGTGC+CGG + chr7_2:17215458-17215477 None:intergenic 45.0%
GGATGTGTGAGAAGACTAGA+CGG - chr7_2:17215502-17215521 Msa1050960:CDS 45.0%
GAAACTAGACTTAGGTGGTC+TGG - chr7_2:17215579-17215598 Msa1050960:intron 45.0%
GGAGAGTAGATTAGATGGAG+GGG - chr7_2:17215637-17215656 Msa1050960:intron 45.0%
GAGCCAAATCACTAGAGGTA+GGG - chr7_2:17215659-17215678 Msa1050960:intron 45.0%
AGCCAAATCACTAGAGGTAG+GGG - chr7_2:17215660-17215679 Msa1050960:intron 45.0%
TTCCCCTACCTCTAGTGATT+TGG + chr7_2:17215665-17215684 None:intergenic 45.0%
CTTAGTGGGATAAGACTTGG+TGG - chr7_2:17215796-17215815 Msa1050960:intron 45.0%
TAAGACCGTAGTGCAATCAC+TGG - chr7_2:17215820-17215839 Msa1050960:intron 45.0%
AATTCAACCAGGGATGGCAT+TGG + chr7_2:17216131-17216150 None:intergenic 45.0%
GTCTATGTGTCAGTGTTCCA+TGG + chr7_2:17216343-17216362 None:intergenic 45.0%
GAACACTGACACATAGACAC+CGG - chr7_2:17216345-17216364 Msa1050960:intron 45.0%
!!! ACACTTTTTCCTGCTGGCTT+TGG - chr7_2:17216515-17216534 Msa1050960:intron 45.0%
CAGGCATAAGCAAGTGATGT+TGG - chr7_2:17216795-17216814 Msa1050960:intron 45.0%
GCATAAGCAAGTGATGTTGG+AGG - chr7_2:17216798-17216817 Msa1050960:intron 45.0%
TTCATCACATTGGCGGTCAT+AGG + chr7_2:17216824-17216843 None:intergenic 45.0%
TCGAAGCTTCATCACATTGG+CGG + chr7_2:17216831-17216850 None:intergenic 45.0%
CGTGGATTCTTCCGTTGAAA+TGG - chr7_2:17216921-17216940 Msa1050960:intron 45.0%
TTTCCTGCTTACGAAGGAAG+TGG - chr7_2:17217108-17217127 Msa1050960:CDS 45.0%
GTAATAGGGGAGGACTCTTT+AGG + chr7_2:17217227-17217246 None:intergenic 45.0%
ATTGCCTGAAGTAATAGGGG+AGG + chr7_2:17217237-17217256 None:intergenic 45.0%
TATTGTACTCTGGTTGGCAG+GGG + chr7_2:17217545-17217564 None:intergenic 45.0%
CTATTGTACTCTGGTTGGCA+GGG + chr7_2:17217546-17217565 None:intergenic 45.0%
ACTATTGTACTCTGGTTGGC+AGG + chr7_2:17217547-17217566 None:intergenic 45.0%
!!! TGATTTTGACTTCCTCCTGG+AGG + chr7_2:17217778-17217797 None:intergenic 45.0%
!!! AGCTGATTTTGACTTCCTCC+TGG + chr7_2:17217781-17217800 None:intergenic 45.0%
CTTATGAAACGTCTGCATGG+AGG - chr7_2:17217971-17217990 Msa1050960:intron 45.0%
GTAGTAGGAATCGCACACAA+AGG + chr7_2:17218150-17218169 None:intergenic 45.0%
!! TGCTCTGAAATGGGAAGAAG+TGG - chr7_2:17218411-17218430 Msa1050960:intron 45.0%
CTTGGAAGATGGTAGTACAC+AGG - chr7_2:17218453-17218472 Msa1050960:intron 45.0%
! ATGCTTCTGTTTGAAACCGG+AGG - chr7_2:17218605-17218624 Msa1050960:intron 45.0%
! TGCTTCTGTTTGAAACCGGA+GGG - chr7_2:17218606-17218625 Msa1050960:intron 45.0%
TCAGCTAGATGTTTGGGCAA+AGG - chr7_2:17219302-17219321 Msa1050960:CDS 45.0%
GCAAAGGAAAGAGAAGTTGC+TGG - chr7_2:17219318-17219337 Msa1050960:CDS 45.0%
CTGTACTTATTGCCAAGCCT+TGG - chr7_2:17219564-17219583 Msa1050960:CDS 45.0%
TGCCAAGCCTTGGGTAATAA+TGG - chr7_2:17219574-17219593 Msa1050960:intron 45.0%
! TGGTTCCTTGTTTGGATCCT+AGG - chr7_2:17219594-17219613 Msa1050960:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG + chr7_2:17219721-17219740 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr7_2:17219744-17219763 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr7_2:17219742-17219761 Msa1050960:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr7_2:17219747-17219766 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG + chr7_2:17219753-17219772 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - chr7_2:17219750-17219769 Msa1050960:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG - chr7_2:17219753-17219772 Msa1050960:intron 45.0%
GAGTGCTATCTATCCGATGT+GGG + chr7_2:17219789-17219808 None:intergenic 45.0%
! AGAGTGCTATCTATCCGATG+TGG + chr7_2:17219790-17219809 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr7_2:17219846-17219865 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr7_2:17219843-17219862 Msa1050960:intron 45.0%
!! TGCAGGATGCTGCTTCATTT+TGG - chr7_2:17220072-17220091 Msa1050960:CDS 45.0%
TCAACAACAGCAGAACATGC+TGG + chr7_2:17220146-17220165 None:intergenic 45.0%
! GTGAAGAAGGAAGCATGTAG+AGG + chr7_2:17220238-17220257 None:intergenic 45.0%
!! GCAAGAGACTTTCTGAAGCT+CGG - chr7_2:17220688-17220707 Msa1050960:intron 45.0%
GCTGGCTAAGGAAATTACTG+AGG - chr7_2:17220720-17220739 Msa1050960:intron 45.0%
GCCTCTTGCAGAATAATCAG+AGG + chr7_2:17220763-17220782 None:intergenic 45.0%
TTGCATGTGAGAGAAGTGGT+TGG - chr7_2:17220789-17220808 Msa1050960:intron 45.0%
TGCATGTGAGAGAAGTGGTT+GGG - chr7_2:17220790-17220809 Msa1050960:intron 45.0%
CATGGGACAGAGCAAAACAA+GGG + chr7_2:17220923-17220942 None:intergenic 45.0%
TCATGGGACAGAGCAAAACA+AGG + chr7_2:17220924-17220943 None:intergenic 45.0%
!!! GCTATTTTGACAGCAAGAGC+TGG - chr7_2:17221216-17221235 Msa1050960:intron 45.0%
TCAGACATCTATGATAGGGG+TGG + chr7_2:17221363-17221382 None:intergenic 45.0%
GACGTTTCAAGCAAAACTCC+AGG + chr7_2:17221730-17221749 None:intergenic 45.0%
! GAGTTTTGCTTGAAACGTCG+TGG - chr7_2:17221731-17221750 Msa1050960:intron 45.0%
GCACAAGATCCCGTCTAATA+TGG + chr7_2:17221805-17221824 None:intergenic 45.0%
ATGACTGTAGGTAGGATTCG+GGG + chr7_2:17221900-17221919 None:intergenic 45.0%
TGCTTAGCAGAAGTTGCATC+AGG + chr7_2:17222265-17222284 None:intergenic 45.0%
TTCTTCTGCAGCTTGATGAG+TGG - chr7_2:17222418-17222437 Msa1050960:CDS 45.0%
AAAATCAACAGGTGGAGGAG+AGG + chr7_2:17222775-17222794 None:intergenic 45.0%
!! TATATTAAAAAATTTATTGT+AGG - chr7_2:17219027-17219046 Msa1050960:intron 5.0%
!! ATATTAAAAAATTTATTGTA+GGG - chr7_2:17219028-17219047 Msa1050960:intron 5.0%
!! TCTGATACTGGATGGTGGAG+TGG + chr7_2:17214542-17214561 None:intergenic 50.0%
ATCTCGGCTTAGTCGCTTCT+TGG - chr7_2:17214597-17214616 Msa1050960:intron 50.0%
ACAATCTTCATCGCCGTCAC+CGG - chr7_2:17214746-17214765 Msa1050960:CDS 50.0%
TCGAGTATCACTTCCGGTGA+CGG + chr7_2:17214762-17214781 None:intergenic 50.0%
CACCGGAAGTGATACTCGAA+TGG - chr7_2:17214763-17214782 Msa1050960:CDS 50.0%
! CGGTGAATGCGATTTTCCTC+CGG + chr7_2:17214838-17214857 None:intergenic 50.0%
TCGATCCGAAAAATCTGCCG+CGG - chr7_2:17214867-17214886 Msa1050960:intron 50.0%
! TGTTCCCGCGGCAGATTTTT+CGG + chr7_2:17214875-17214894 None:intergenic 50.0%
ATACCGGAATCATGTTCCCG+CGG + chr7_2:17214887-17214906 None:intergenic 50.0%
CCTCGTAACACGTGCGAAAT+CGG - chr7_2:17214914-17214933 Msa1050960:intron 50.0%
ACGTGCGAAATCGGAGAAGA+CGG - chr7_2:17214923-17214942 Msa1050960:intron 50.0%
CGAAATCGGAGAAGACGGTT+AGG - chr7_2:17214928-17214947 Msa1050960:intron 50.0%
AGACGGTTAGGAATGTGAGG+AGG - chr7_2:17214940-17214959 Msa1050960:intron 50.0%
! TGCGTTGATGGAGAGGGATT+CGG - chr7_2:17215037-17215056 Msa1050960:intron 50.0%
AGAAGGAGGTTGAGAGGTTG+AGG - chr7_2:17215063-17215082 Msa1050960:intron 50.0%
GGAATGTTGTGAGGAGACAG+AGG - chr7_2:17215084-17215103 Msa1050960:CDS 50.0%
TGTTGTGAGGAGACAGAGGA+AGG - chr7_2:17215088-17215107 Msa1050960:CDS 50.0%
GAGGATGCTAGAGGTTTCGA+GGG - chr7_2:17215121-17215140 Msa1050960:CDS 50.0%
AGAGGTTTCGAGGGAAGAAG+CGG - chr7_2:17215130-17215149 Msa1050960:CDS 50.0%
TGTTGTTCGAGACGGAGTGT+TGG - chr7_2:17215421-17215440 Msa1050960:CDS 50.0%
! GTTGTTCGAGACGGAGTGTT+GGG - chr7_2:17215422-17215441 Msa1050960:CDS 50.0%
! AGTGTTGGGCGGTAAAGAAC+CGG - chr7_2:17215436-17215455 Msa1050960:CDS 50.0%
GGAGCCAAATCACTAGAGGT+AGG - chr7_2:17215658-17215677 Msa1050960:intron 50.0%
CGGCTATAGCGATGACATAG+TGG - chr7_2:17215953-17215972 Msa1050960:CDS 50.0%
TTTCGACTACCAAAGCCAGC+AGG + chr7_2:17216527-17216546 None:intergenic 50.0%
TCACTTGCTTATGCCTGCAG+AGG + chr7_2:17216792-17216811 None:intergenic 50.0%
GCAAGGGATGCTCAAAGATC+AGG - chr7_2:17216898-17216917 Msa1050960:intron 50.0%
GAGTCCTCCCCTATTACTTC+AGG - chr7_2:17217230-17217249 Msa1050960:intron 50.0%
GAGCTGATGCAGAGATCTTG+AGG - chr7_2:17217319-17217338 Msa1050960:intron 50.0%
GGAGCCACCTCTCAAAATGT+TGG - chr7_2:17218025-17218044 Msa1050960:intron 50.0%
GTCGCAATTTAGGCGACTAG+GGG + chr7_2:17219699-17219718 None:intergenic 50.0%
GGTCGCAATTTAGGCGACTA+GGG + chr7_2:17219700-17219719 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG + chr7_2:17219701-17219720 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG - chr7_2:17219702-17219721 Msa1050960:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr7_2:17219773-17219792 Msa1050960:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr7_2:17219841-17219860 None:intergenic 50.0%
TTGCGTATACTGTTCCTGCC+AGG - chr7_2:17219935-17219954 Msa1050960:CDS 50.0%
GAATACCATTAAGGCCTGGC+AGG + chr7_2:17219952-17219971 None:intergenic 50.0%
GAGTCACTTGCACGACTTGA+GGG + chr7_2:17219979-17219998 None:intergenic 50.0%
! TCAGCAACCATCGACTGCAA+GGG - chr7_2:17220097-17220116 Msa1050960:CDS 50.0%
GCATATTCCCTTGCAGTCGA+TGG + chr7_2:17220107-17220126 None:intergenic 50.0%
CATGCTTCCTTCTTCACCAC+AGG - chr7_2:17220241-17220260 Msa1050960:CDS 50.0%
AAGGAAAATACAACGGGGGG+TGG - chr7_2:17220520-17220539 Msa1050960:intron 50.0%
AAGTGGTTGGGTGAGAGAGT+TGG - chr7_2:17220802-17220821 Msa1050960:intron 50.0%
AGTGGTTGGGTGAGAGAGTT+GGG - chr7_2:17220803-17220822 Msa1050960:intron 50.0%
TTCCTGTCCAGATGATCCAC+TGG + chr7_2:17221169-17221188 None:intergenic 50.0%
GCTGAGACCCGACATATTGA+TGG + chr7_2:17221264-17221283 None:intergenic 50.0%
! TCTGATATGGAGGCATGTCC+AGG - chr7_2:17221378-17221397 Msa1050960:intron 50.0%
! ATATGGAGGCATGTCCAGGA+TGG - chr7_2:17221382-17221401 Msa1050960:intron 50.0%
! ATTGGGGGTATGCATATGCG+TGG - chr7_2:17221616-17221635 Msa1050960:intron 50.0%
! TTGGGGGTATGCATATGCGT+GGG - chr7_2:17221617-17221636 Msa1050960:intron 50.0%
TTCTTAATGCGCAGGCTTGG+AGG - chr7_2:17221670-17221689 Msa1050960:intron 50.0%
TCTTAATGCGCAGGCTTGGA+GGG - chr7_2:17221671-17221690 Msa1050960:intron 50.0%
AAACTCCAGGGACTCCAGTA+CGG + chr7_2:17221717-17221736 None:intergenic 50.0%
AGACGGGATCTTGTGCAAAG+TGG - chr7_2:17221809-17221828 Msa1050960:intron 50.0%
TGACTGTAGGTAGGATTCGG+GGG + chr7_2:17221899-17221918 None:intergenic 50.0%
TGGTTGCCTGAACTCAAGAC+TGG - chr7_2:17222119-17222138 Msa1050960:CDS 50.0%
TTCTGCAGCTTGATGAGTGG+TGG - chr7_2:17222421-17222440 Msa1050960:CDS 50.0%
TCTGCAGCTTGATGAGTGGT+GGG - chr7_2:17222422-17222441 Msa1050960:CDS 50.0%
GGCTTAGTCGCTTCTTGGAC+CGG - chr7_2:17214602-17214621 Msa1050960:intron 55.0%
TCGCTTCTTGGACCGGATAC+CGG - chr7_2:17214609-17214628 Msa1050960:intron 55.0%
CGATCCGAAAAATCTGCCGC+GGG - chr7_2:17214868-17214887 Msa1050960:intron 55.0%
GCGGGAACATGATTCCGGTA+TGG - chr7_2:17214886-17214905 Msa1050960:intron 55.0%
CCGATTTCGCACGTGTTACG+AGG + chr7_2:17214917-17214936 None:intergenic 55.0%
GAAGGAGAAGAGAGAAGGGG+AGG - chr7_2:17215004-17215023 Msa1050960:intron 55.0%
GAAGAGAGAAGGGGAGGAAG+TGG - chr7_2:17215010-17215029 Msa1050960:intron 55.0%
GGAAGTGGAGGTTGCGTTGA+TGG - chr7_2:17215025-17215044 Msa1050960:intron 55.0%
! TGGAGGTTGCGTTGATGGAG+AGG - chr7_2:17215030-17215049 Msa1050960:intron 55.0%
! GGAGGTTGCGTTGATGGAGA+GGG - chr7_2:17215031-17215050 Msa1050960:intron 55.0%
!! GGAGAGGGATTCGGTGAAGA+AGG - chr7_2:17215046-17215065 Msa1050960:intron 55.0%
!! GAGGGATTCGGTGAAGAAGG+AGG - chr7_2:17215049-17215068 Msa1050960:intron 55.0%
CGGTGAAGAAGGAGGTTGAG+AGG - chr7_2:17215057-17215076 Msa1050960:intron 55.0%
CGAGGATGCTAGAGGTTTCG+AGG - chr7_2:17215120-17215139 Msa1050960:CDS 55.0%
TTTCGAGGGAAGAAGCGGAG+AGG - chr7_2:17215135-17215154 Msa1050960:CDS 55.0%
TCGGACAGTGGTAAGACTGG+CGG - chr7_2:17215398-17215417 Msa1050960:CDS 55.0%
!! ACTGGCGGTGTTGTTCGAGA+CGG - chr7_2:17215413-17215432 Msa1050960:CDS 55.0%
CAGAGATGAGGATGCTGCGT+TGG - chr7_2:17215481-17215500 Msa1050960:CDS 55.0%
GAGGGGAGCCAAATCACTAG+AGG - chr7_2:17215654-17215673 Msa1050960:intron 55.0%
GAATCGTCCAATGCCATCCC+TGG - chr7_2:17216121-17216140 Msa1050960:intron 55.0%
CCGAGATGTGTCAGTGTCAC+CGG + chr7_2:17216415-17216434 None:intergenic 55.0%
CCGGTGACACTGACACATCT+CGG - chr7_2:17216412-17216431 Msa1050960:intron 55.0%
! AGTGGGTTCGTTACCTCTGC+AGG - chr7_2:17216776-17216795 Msa1050960:intron 55.0%
GGATGCTCAAAGATCAGGCG+TGG - chr7_2:17216903-17216922 Msa1050960:intron 55.0%
ACGCCACTTCCTTCGTAAGC+AGG + chr7_2:17217114-17217133 None:intergenic 55.0%
AGCTTCGCTGCTTCTGCTTG+AGG + chr7_2:17217147-17217166 None:intergenic 55.0%
TCAAGCAGAAGCAGCGAAGC+TGG - chr7_2:17217146-17217165 Msa1050960:CDS 55.0%
CAAGCAGAAGCAGCGAAGCT+GGG - chr7_2:17217147-17217166 Msa1050960:CDS 55.0%
AAGCAGAAGCAGCGAAGCTG+GGG - chr7_2:17217148-17217167 Msa1050960:CDS 55.0%
! TGATGGGCAGATTCCGGATG+AGG - chr7_2:17217179-17217198 Msa1050960:intron 55.0%
AGGAGAGCTCCCATCAGAAG+AGG + chr7_2:17217710-17217729 None:intergenic 55.0%
CTAGGGGTGGACCGCAATTA+AGG + chr7_2:17219683-17219702 None:intergenic 55.0%
GCAATTTAGGCGACTAGGGG+TGG + chr7_2:17219696-17219715 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr7_2:17219732-17219751 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG - chr7_2:17219756-17219775 Msa1050960:intron 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr7_2:17219833-17219852 Msa1050960:intron 55.0%
CTGTTCCTGCCAGGCCTTAA+TGG - chr7_2:17219944-17219963 Msa1050960:CDS 55.0%
GGAGTCACTTGCACGACTTG+AGG + chr7_2:17219980-17219999 None:intergenic 55.0%
! GTCAGCAACCATCGACTGCA+AGG - chr7_2:17220096-17220115 Msa1050960:CDS 55.0%
! GAAGCTCGGTGAGTTTGAGC+TGG - chr7_2:17220702-17220721 Msa1050960:intron 55.0%
CGGTGAGTTTGAGCTGGCTA+AGG - chr7_2:17220708-17220727 Msa1050960:intron 55.0%
GTGAGAGAGTTGGGAGTGAG+AGG - chr7_2:17220812-17220831 Msa1050960:intron 55.0%
! TCTGGTTCAGGCACTGCTTG+AGG - chr7_2:17221134-17221153 Msa1050960:intron 55.0%
AGATGATCCACTGGACCCGA+TGG + chr7_2:17221160-17221179 None:intergenic 55.0%
ATCGGGTCCAGTGGATCATC+TGG - chr7_2:17221159-17221178 Msa1050960:intron 55.0%
GTCCAGTGGATCATCTGGAC+AGG - chr7_2:17221164-17221183 Msa1050960:intron 55.0%
TGACAGCAAGAGCTGGTGCT+CGG - chr7_2:17221223-17221242 Msa1050960:intron 55.0%
GCTGCACTTCAGTATGCTGC+TGG - chr7_2:17221282-17221301 Msa1050960:intron 55.0%
GCACTTCAGTATGCTGCTGG+TGG - chr7_2:17221285-17221304 Msa1050960:intron 55.0%
!! ATAGGGGTGGACTGTGCACT+AGG + chr7_2:17221350-17221369 None:intergenic 55.0%
! TGCTGGTCTAGCATCCGTAC+TGG - chr7_2:17221700-17221719 Msa1050960:intron 55.0%
! TGATGAGTGGTGGGAGCAAC+CGG - chr7_2:17222431-17222450 Msa1050960:CDS 55.0%
TCGACTGGGTGACAGTGGAT+GGG - chr7_2:17222466-17222485 Msa1050960:CDS 55.0%
! ATGCGATTTTCCTCCGGCGC+TGG + chr7_2:17214832-17214851 None:intergenic 60.0%
CTGCCGCGGGAACATGATTC+CGG - chr7_2:17214881-17214900 Msa1050960:intron 60.0%
ACGGTTCACGGTGAAGGGGA+TGG - chr7_2:17214969-17214988 Msa1050960:intron 60.0%
GTTCACGGTGAAGGGGATGG+TGG - chr7_2:17214972-17214991 Msa1050960:intron 60.0%
! ACGGTGAAGGGGATGGTGGT+GGG - chr7_2:17214976-17214995 Msa1050960:intron 60.0%
!! GGATGGTGGTGGGAGGAAGA+AGG - chr7_2:17214986-17215005 Msa1050960:intron 60.0%
GAGAGAAGGGGAGGAAGTGG+AGG - chr7_2:17215013-17215032 Msa1050960:intron 60.0%
GGGAAGAAGCGGAGAGGAAG+AGG - chr7_2:17215141-17215160 Msa1050960:CDS 60.0%
!! GTTCGAGACGGAGTGTTGGG+CGG - chr7_2:17215425-17215444 Msa1050960:CDS 60.0%
GGGGTGGACCGCAATTAAGG+CGG + chr7_2:17219680-17219699 None:intergenic 60.0%
! CAGGCACTGCTTGAGGCCAT+CGG - chr7_2:17221141-17221160 Msa1050960:intron 60.0%
! AGGCACTGCTTGAGGCCATC+GGG - chr7_2:17221142-17221161 Msa1050960:intron 60.0%
GACAGCAAGAGCTGGTGCTC+GGG - chr7_2:17221224-17221243 Msa1050960:intron 60.0%
GGCTTGGAGGGTTCAGATGC+TGG - chr7_2:17221683-17221702 Msa1050960:intron 60.0%
AGCATCCGTACTGGAGTCCC+TGG - chr7_2:17221709-17221728 Msa1050960:intron 60.0%
CAGTCGACAACCGTCGATGC+CGG + chr7_2:17222453-17222472 None:intergenic 60.0%
!! GGCATCGACGGTTGTCGACT+GGG - chr7_2:17222452-17222471 Msa1050960:CDS 60.0%
! GGTTGTCGACTGGGTGACAG+TGG - chr7_2:17222461-17222480 Msa1050960:CDS 60.0%
GTCGACTGGGTGACAGTGGA+TGG - chr7_2:17222465-17222484 Msa1050960:CDS 60.0%
GGCTGCTTCACAGCAACTCG+AGG + chr7_2:17222667-17222686 None:intergenic 60.0%
!! CGATTTTCCTCCGGCGCTGG+CGG + chr7_2:17214829-17214848 None:intergenic 65.0%
! CACGGTGAAGGGGATGGTGG+TGG - chr7_2:17214975-17214994 Msa1050960:intron 65.0%
!! GTGAAGGGGATGGTGGTGGG+AGG - chr7_2:17214979-17214998 Msa1050960:intron 65.0%
CTTGGGGCTGATGTGCCTCC+AGG - chr7_2:17217760-17217779 Msa1050960:CDS 65.0%
CTTGAGGCCATCGGGTCCAG+TGG - chr7_2:17221150-17221169 Msa1050960:intron 65.0%
AGCTGGTGCTCGGGATCCGT+CGG - chr7_2:17221233-17221252 Msa1050960:intron 65.0%
! GTGGGAGCAACCGGCATCGA+CGG - chr7_2:17222440-17222459 Msa1050960:CDS 65.0%
!! CGGCATCGACGGTTGTCGAC+TGG - chr7_2:17222451-17222470 Msa1050960:CDS 65.0%
! CTGGCGGCGTATTGGCCGAG+TGG + chr7_2:17214813-17214832 None:intergenic 70.0%
GGGGCTGATGTGCCTCCAGG+AGG - chr7_2:17217763-17217782 Msa1050960:CDS 70.0%
GGCCAATACGCCGCCAGCGC+CGG - chr7_2:17214816-17214835 Msa1050960:intron 75.0%
!! CTCCGGCGCTGGCGGCGTAT+TGG + chr7_2:17214821-17214840 None:intergenic 75.0%
! CAATACGCCGCCAGCGCCGG+AGG - chr7_2:17214819-17214838 Msa1050960:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 17214411 17222848 17214411 ID=Msa1050960;Name=Msa1050960
chr7_2 mRNA 17214411 17222848 17214411 ID=Msa1050960-mRNA-1;Parent=Msa1050960;Name=Msa1050960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=330|0.9|0.81|1|1|1|11|0|827
chr7_2 exon 17214411 17214611 17214411 ID=Msa1050960-mRNA-1:exon:3870;Parent=Msa1050960-mRNA-1
chr7_2 exon 17214744 17214830 17214744 ID=Msa1050960-mRNA-1:exon:3869;Parent=Msa1050960-mRNA-1
chr7_2 exon 17215066 17215198 17215066 ID=Msa1050960-mRNA-1:exon:3868;Parent=Msa1050960-mRNA-1
chr7_2 exon 17215380 17215575 17215380 ID=Msa1050960-mRNA-1:exon:3867;Parent=Msa1050960-mRNA-1
chr7_2 exon 17215953 17216115 17215953 ID=Msa1050960-mRNA-1:exon:3866;Parent=Msa1050960-mRNA-1
chr7_2 exon 17216997 17217182 17216997 ID=Msa1050960-mRNA-1:exon:3865;Parent=Msa1050960-mRNA-1
chr7_2 exon 17217744 17217953 17217744 ID=Msa1050960-mRNA-1:exon:3864;Parent=Msa1050960-mRNA-1
chr7_2 exon 17219193 17219366 17219193 ID=Msa1050960-mRNA-1:exon:3863;Parent=Msa1050960-mRNA-1
chr7_2 exon 17219446 17219587 17219446 ID=Msa1050960-mRNA-1:exon:3862;Parent=Msa1050960-mRNA-1
chr7_2 exon 17219919 17220461 17219919 ID=Msa1050960-mRNA-1:exon:3861;Parent=Msa1050960-mRNA-1
chr7_2 exon 17222070 17222848 17222070 ID=Msa1050960-mRNA-1:exon:3860;Parent=Msa1050960-mRNA-1
chr7_2 five_prime_UTR 17222519 17222848 17222519 ID=Msa1050960-mRNA-1:five_prime_utr;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17222070 17222518 17222070 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17219919 17220461 17219919 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17219446 17219587 17219446 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17219193 17219366 17219193 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17217744 17217953 17217744 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17216997 17217182 17216997 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17215953 17216115 17215953 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17215380 17215575 17215380 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17215066 17215198 17215066 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17214744 17214830 17214744 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
chr7_2 CDS 17214411 17214611 17214411 ID=Msa1050960-mRNA-1:cds;Parent=Msa1050960-mRNA-1
Gene Sequence

>Msa1050960

ATGCAACAATCTTCATCGCCGTCACCGGAAGTGATACTCGAATGGCTTCACAAAGAAATGGGATACAGACCACTCGGCCAATACGCCGCCAGCGCCGGAGGAAAATCGCATTCACCGTCAGTCGAATCGATCCGAAAAATCTGCCGCGGGAACATGATTCCGGTATGGAATTTCCTCGTAACACGTGCGAAATCGGAGAAGACGGTTAGGAATGTGAGGAGGAATATTACGGTTCACGGTGAAGGGGATGGTGGTGGGAGGAAGAAGGAGAAGAGAGAAGGGGAGGAAGTGGAGGTTGCGTTGATGGAGAGGGATTCGGTGAAGAAGGAGGTTGAGAGGTTGAGGAATGTTGTGAGGAGACAGAGGAAGGATTTGAAAGCGAGGATGCTAGAGGTTTCGAGGGAAGAAGCGGAGAGGAAGAGGATGCTTGATGAACGGGCGAATTACAGGCATAAGCAAGTGATGTTGGAGGCCTATGACCGCCAATGTGATGAAGCTTCGAGAATATTTGCTGAATACCATAAACGTCTCTGTTACTATATAAATCAAGCAAGGGATGCTCAAAGATCAGGCGTGGATTCTTCCGTTGAAATGGTAAATAGTTTTAGTGCAAAAAATGAGAAGGAAGCTGTTTATTCTACTGTTAAGGGCAGTAAATCTTCAGATGATGTCATTGTCATTGAAACCACGAGGGAAAAGAATATTAGAAAGGCGTGTGAATCTCTTGTAGCTTACATGGTTGAGAAAATACAAAGTTCTTTTCCTGCTTACGAAGGAAGTGGCGTTCTAGCAAATCCTCAAGCAGAAGCAGCGAAGCTGGGGTTTGATTTTGATGGGCAGATTCCGGATGAGGTTAGAACAGTTATTGTGAATTGCCTAAAGAGTCCTCCCCTATTACTTCAGGCAATTACTGCATACACTTCTCACTTGAAAAGTCTAATATCCAGAGAAATAGAGAAAATTGATGTTAGAGCTGATGCAGAGATCTTGAGGTACAAATATGAAAATAACATAGTTATGGATGTTTCCTCTTCTGATGGGAGCTCTCCTCTACAGTATCCACTTTATGGAAATGGAAAACTTGGGGCTGATGTGCCTCCAGGAGGAAGTCAAAATCAGCTCCTTGAAAGACAGAAAGCTCATGTTCAGCAGTTTTTGGCTACTGAAGATGCACTAAACAATGCTGCAGAAGCAAGGGACTTGTGTGAAAAACTTATGAAACGTCTGCATGGAGGCACCGATGTTACTTCTCGTTCAATTGGGATTGGAGCCACCTCTCAAAATGTTGGAAGTCTTAGACAACTTCAGCTAGATGTTTGGGCAAAGGAAAGAGAAGTTGCTGGTTTAAAGGCAAGTTTAAACACCTTGATGTCTGAAATACAACGCTTGAATAAGTTATGTGCCGAGAGGAAAGAAGCCGAAGATTCTCTGAAAAAAAAGTGGAAAAAGATTGAAGAGTTTGATGGTCGTAGATCAGAGCTTGAGTCCATATACACCGCACTTCTTAAAGCAAATACGGATGCTGCTTCATTTTGGAGTCAGCAACCATCGACTGCAAGGGAATATGCTTTAAGCACTATAATTCCAGCATGTTCTGCTGTTGTTGAGACTTCAAATAGTGCAAAGGATCTTATTGAGAAAGAAGTGTCTGCTTTTTATCGGAGTCCAGATAATAGCCTCTACATGCTTCCTTCTTCACCACAGGCACTGCTTGAGGCCATCGGGTCCAGTGGATCATCTGGACAGGAAGCAGTTGCAAATGCAGAAATAAGTGCGGCTATTTTGACAGCAAGAGCTGGTGCTCGGGATCCGTCGGCAATTCCATCAATATGTCGGGTCTCAGCTGCACTTCAGTATGCTGCTGGTGGCTTGGAGGGTTCAGATGCTGGTCTAGCATCCGTACTGGAGTCCCTGGAGTTTTGCTTGAAACGTCGTGGTTCAGAAGCTAGTGTTTTGGAAGATTTATTAAAGGCTATTAATCTTGTCCATATTAGACGGGATCTTGTGCAAAGTGGTCATGCCTTGTTGAATCATGCCTACTTTGTTCAACAGGACTATGAAAGGACGACCAATTTTTCTTTAAATTTGGCAGCAGAACAAGAAAGAGCTGTCACGGAAAAATGGTTGCCTGAACTCAAGACTGGTGTTTTGAATGCTCAGCAGAGTTTGGAAGCTTGCAAATATGTTTGGGGATTGCTTGATGAGTGGTGGGAGCAACCGGCATCGACGGTTGTCGACTGGGTGACAGTGGATGGGCAAAATGTAGCTGCCTATTATAATCATACTTTATATTCTTCAGCCTCGAGTTGCTGTGAAGCAGCCAGTACTTCAAGCATTTACTTTGGGATGGAATGTGCAGCTGTTGTTGTTGTTGATAGACCAAGAAACCCCAAGAACAAGAAAGAAACCTCTCCTCCACCTGTTGATTTTTTTAGATTCCCCCTTCTTTCTCTTCAGAAGTGTGATGTGTATTATAACTTATAA
Protein sequence

>Msa1050960

MQQSSSPSPEVILEWLHKEMGYRPLGQYAASAGGKSHSPSVESIRKICRGNMIPVWNFLVTRAKSEKTVRNVRRNITVHGEGDGGGRKKEKREGEEVEVALMERDSVKKEVERLRNVVRRQRKDLKARMLEVSREEAERKRMLDERANYRHKQVMLEAYDRQCDEASRIFAEYHKRLCYYINQARDAQRSGVDSSVEMVNSFSAKNEKEAVYSTVKGSKSSDDVIVIETTREKNIRKACESLVAYMVEKIQSSFPAYEGSGVLANPQAEAAKLGFDFDGQIPDEVRTVIVNCLKSPPLLLQAITAYTSHLKSLISREIEKIDVRADAEILRYKYENNIVMDVSSSDGSSPLQYPLYGNGKLGADVPPGGSQNQLLERQKAHVQQFLATEDALNNAAEARDLCEKLMKRLHGGTDVTSRSIGIGATSQNVGSLRQLQLDVWAKEREVAGLKASLNTLMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDGRRSELESIYTALLKANTDAASFWSQQPSTAREYALSTIIPACSAVVETSNSAKDLIEKEVSAFYRSPDNSLYMLPSSPQALLEAIGSSGSSGQEAVANAEISAAILTARAGARDPSAIPSICRVSAALQYAAGGLEGSDAGLASVLESLEFCLKRRGSEASVLEDLLKAINLVHIRRDLVQSGHALLNHAYFVQQDYERTTNFSLNLAAEQERAVTEKWLPELKTGVLNAQQSLEACKYVWGLLDEWWEQPASTVVDWVTVDGQNVAAYYNHTLYSSASSCCEAASTSSIYFGMECAAVVVVDRPRNPKNKKETSPPPVDFFRFPLLSLQKCDVYYNL*