AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0620230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620230 MtrunA17_Chr8g0386251 97.840 324 7 0 1 324 1 324 0.0 657
Msa0620230 MtrunA17_Chr5g0431171 34.395 157 97 2 15 171 80 230 1.79e-14 74.3
Msa0620230 MtrunA17_Chr5g0431151 35.669 157 95 3 15 171 81 231 1.94e-14 74.3
Msa0620230 MtrunA17_Chr4g0024601 28.571 203 125 6 10 207 2 189 5.84e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620230 AT4G24940.1 71.562 320 91 0 4 323 2 321 2.63e-178 496
Msa0620230 AT5G50580.2 71.519 316 90 0 4 319 2 317 4.89e-174 485
Msa0620230 AT5G50680.1 71.519 316 90 0 4 319 2 317 4.89e-174 485
Msa0620230 AT5G50580.1 70.886 316 90 1 4 319 2 315 1.59e-170 476
Msa0620230 AT5G50680.2 70.886 316 90 1 4 319 2 315 1.59e-170 476
Msa0620230 AT2G30110.1 36.943 157 93 2 15 171 77 227 1.37e-16 81.3
Msa0620230 AT5G06460.1 34.395 157 97 3 15 171 74 224 2.09e-14 74.7
Msa0620230 AT2G32410.3 29.861 144 95 3 10 150 2 142 3.25e-12 67.4
Msa0620230 AT2G32410.1 29.861 144 95 3 10 150 2 142 3.29e-12 67.4
Msa0620230 AT2G32410.2 29.861 144 95 3 10 150 2 142 3.96e-12 67.0
Msa0620230 AT1G05180.1 28.671 143 96 3 16 155 24 163 8.26e-11 63.2

Find 133 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGTTTCTGCTGTTAT+TGG 0.120073 4_2:-71601683 Msa0620230:CDS
AAAGCTCATGTCTTAGTTTA+TGG 0.134275 4_2:-71606904 Msa0620230:CDS
GGAAATCTTGGTTGTTAATA+TGG 0.151575 4_2:-71601412 Msa0620230:three_prime_UTR
ATTTAGAGCGTTGACGATTT+AGG 0.185755 4_2:-71601295 Msa0620230:three_prime_UTR
CTCCAGTTTCTGCTGTTATT+GGG 0.194555 4_2:-71601682 Msa0620230:CDS
GAGGTTATCAAAGCAATTTC+TGG 0.209705 4_2:-71601563 Msa0620230:CDS
AAATATAACCAGCTTCTTTC+GGG 0.238266 4_2:+71601162 None:intergenic
CAATGTTCTTAAGCTGAAAA+AGG 0.245988 4_2:-71601867 Msa0620230:CDS
AAAGCTTATGTTTATGATCT+AGG 0.255464 4_2:-71601064 Msa0620230:three_prime_UTR
TGACCGTCAGATTAGGGTTT+GGG 0.273281 4_2:-71607133 Msa0620230:CDS
TTTAGAGCGTTGACGATTTA+GGG 0.278454 4_2:-71601294 Msa0620230:three_prime_UTR
AAGCAGAAAATCGCGGTTAA+TGG 0.278696 4_2:+71607315 None:intergenic
TATCGGGCTCGAGTGTATTT+TGG 0.289757 4_2:-71600771 Msa0620230:three_prime_UTR
AGTGTGTATGTTTAGGAATT+AGG 0.291933 4_2:+71600871 None:intergenic
CTACACGTTTGGAAGCTTTC+CGG 0.296580 4_2:+71605827 None:intergenic
TTCTGAGTCACTGGAAATCT+TGG 0.301471 4_2:-71601424 Msa0620230:three_prime_UTR
TAAATATAACCAGCTTCTTT+CGG 0.302781 4_2:+71601161 None:intergenic
AGCTGGTTATATTTATGTTC+TGG 0.304268 4_2:-71601153 Msa0620230:three_prime_UTR
TCATGTGCCTGATACTCTTC+TGG 0.307495 4_2:-71601735 Msa0620230:CDS
CTTTGTATGACCGTCAGATT+AGG 0.312758 4_2:-71607140 Msa0620230:CDS
TTATTGTTCTCAGACAAATA+TGG 0.331390 4_2:-71600623 Msa0620230:three_prime_UTR
AACTTCAAAGACAGGTTTAC+CGG 0.332460 4_2:+71601121 None:intergenic
GACATATCTGATTCAAATAC+TGG 0.335424 4_2:-71601476 Msa0620230:CDS
GGCAGTGTTAAGGAGTAAAA+TGG 0.346884 4_2:+71600807 None:intergenic
GGCTTGTGATGGTTCTCTTC+CGG 0.351890 4_2:-71601093 Msa0620230:three_prime_UTR
GCTGGTTATATTTATGTTCT+GGG 0.359205 4_2:-71601152 Msa0620230:three_prime_UTR
GTTCGTGTCTTTGTGGATAA+AGG 0.360856 4_2:-71606183 Msa0620230:intron
AGCTTGTTATGTCTATGTTC+TGG 0.364920 4_2:-71600977 Msa0620230:three_prime_UTR
CCTGATGAGAATGTGTATAA+TGG 0.366364 4_2:-71606258 Msa0620230:CDS
TCGTCCAAGTGTGTATGTTT+AGG 0.372967 4_2:+71600864 None:intergenic
TAATCCAGTAGAGTACTAAA+TGG 0.374623 4_2:+71600700 None:intergenic
TCCTATGGTTCGTGTCTTTG+TGG 0.380042 4_2:-71606190 Msa0620230:CDS
AATCTTTCCAGAAGAGTATC+AGG 0.384196 4_2:+71601728 None:intergenic
GACCGGTCTATCGTCAATTA+AGG 0.388703 4_2:+71606317 None:intergenic
ACCTGTCTTTGAAGTTAGAA+AGG 0.389798 4_2:-71601114 Msa0620230:three_prime_UTR
AGTATAAAATGCTACACGTT+TGG 0.407403 4_2:+71605816 None:intergenic
TCAAAGCAATTTCTGGGAAA+GGG 0.415897 4_2:-71601556 Msa0620230:CDS
CCATTATACACATTCTCATC+AGG 0.427583 4_2:+71606258 None:intergenic
TGCAAGAATATTGTTCTGGC+TGG 0.429331 4_2:-71606354 Msa0620230:CDS
ATGACCGTCAGATTAGGGTT+TGG 0.429457 4_2:-71607134 Msa0620230:CDS
AAATCCATTTAGTACTCTAC+TGG 0.431792 4_2:-71600704 Msa0620230:three_prime_UTR
TGAGAATGAAAATTCGTCTC+AGG 0.433611 4_2:+71607360 None:intergenic
GACTGTTGTTGGCAGTGTTA+AGG 0.435615 4_2:+71600797 None:intergenic
AGCTTTGATGTAGAATTCTT+CGG 0.436477 4_2:-71606006 Msa0620230:CDS
CGGCGACGGCGAAGAGTTAA+CGG 0.442404 4_2:-71607175 Msa0620230:CDS
TCCAGTTTCTGCTGTTATTG+GGG 0.444754 4_2:-71601681 Msa0620230:CDS
TTTGTATGACCGTCAGATTA+GGG 0.453191 4_2:-71607139 Msa0620230:CDS
GCCCGATAGGTGACTGTTGT+TGG 0.454305 4_2:+71600786 None:intergenic
ACTTAAAGACTTCAATCCTA+TGG 0.454595 4_2:-71606205 Msa0620230:CDS
AGGTTATCAAAGCAATTTCT+GGG 0.456843 4_2:-71601562 Msa0620230:CDS
AACCTACATACCTCAAAACT+TGG 0.457034 4_2:+71603272 None:intergenic
TTCAAAAGACAGCTTGCCCT+TGG 0.458407 4_2:+71601211 None:intergenic
TGATACTCTTCTGGAAAGAT+TGG 0.460712 4_2:-71601726 Msa0620230:CDS
GTCTCAGGGCGCGGAGGAGA+AGG 0.461835 4_2:+71607375 None:intergenic
ATCTAGCCCGTGCTTGGCAC+GGG 0.463226 4_2:-71607460 Msa0620230:five_prime_UTR
TGAAAATTCGTCTCAGGGCG+CGG 0.471764 4_2:+71607366 None:intergenic
TATGTTCTGGGTTCTCCAGC+CGG 0.477087 4_2:-71601140 Msa0620230:three_prime_UTR
GAAGTTACAAATCCTCATGA+TGG 0.484490 4_2:-71601191 Msa0620230:three_prime_UTR
GCCTTTCTAACTTCAAAGAC+AGG 0.487916 4_2:+71601113 None:intergenic
TGCCAACAACAGTCACCTAT+CGG 0.495963 4_2:-71600788 Msa0620230:three_prime_UTR
AATCTAGCCCGTGCTTGGCA+CGG 0.496222 4_2:-71607461 Msa0620230:five_prime_UTR
GTCTTAGTTTATGGAATGAA+AGG 0.496608 4_2:-71606895 Msa0620230:CDS
ATCAAAGCAATTTCTGGGAA+AGG 0.498227 4_2:-71601557 Msa0620230:CDS
GATTCTCCAGCGGGTAAACC+TGG 0.505734 4_2:-71600955 Msa0620230:three_prime_UTR
TCGACAATCTAGCCCGTGCT+TGG 0.509149 4_2:-71607466 Msa0620230:five_prime_UTR
GAGGCTGAAGGACGTAGTGC+GGG 0.514026 4_2:-71601914 Msa0620230:CDS
TGTATGTTTAGGAATTAGGA+TGG 0.516406 4_2:+71600875 None:intergenic
TACCTTGGAGGGCTCTTCAC+AGG 0.517069 4_2:-71602526 Msa0620230:CDS
AATATTGTTCTGGCTGGAGT+TGG 0.520269 4_2:-71606348 Msa0620230:CDS
CAAAGCAATTTCTGGGAAAG+GGG 0.521786 4_2:-71601555 Msa0620230:CDS
TACTGGAAAGTGACATCTCT+AGG 0.523786 4_2:-71601459 Msa0620230:exon
TGGACACCCGTGCCAAGCAC+GGG 0.524066 4_2:+71607454 None:intergenic
GCAGGACTATAAATATCAAA+AGG 0.525364 4_2:-71605752 Msa0620230:intron
ATGCTCTATCAGTACCTTGG+AGG 0.531201 4_2:-71602538 Msa0620230:CDS
CTGGACACCCGTGCCAAGCA+CGG 0.534417 4_2:+71607453 None:intergenic
TCAAAGACAGGTTTACCGGC+TGG 0.535673 4_2:+71601125 None:intergenic
CCAGTTTCTGCTGTTATTGG+GGG 0.535744 4_2:-71601680 Msa0620230:CDS
GGTTCTGTCCCGAAAGAAGC+TGG 0.535753 4_2:-71601170 Msa0620230:three_prime_UTR
TTTGATGCTTCTGATGGGAA+GGG 0.536125 4_2:-71601509 Msa0620230:CDS
GCCAACAACAGTCACCTATC+GGG 0.539211 4_2:-71600787 Msa0620230:three_prime_UTR
GAAGTTAGAAAGGCTTGTGA+TGG 0.546828 4_2:-71601104 Msa0620230:three_prime_UTR
AAGCTGTACTTTGCAATGAG+AGG 0.549242 4_2:-71602494 Msa0620230:intron
CGGCGAAGAGTTAACGGCGC+AGG 0.555211 4_2:-71607169 Msa0620230:CDS
AAAGGAGCTTTGTACTGCAC+AGG 0.559597 4_2:-71601849 Msa0620230:intron
GACCTTAATTGACGATAGAC+CGG 0.560595 4_2:-71606319 Msa0620230:CDS
TATGTTCTGGATTCTCCAGC+GGG 0.561241 4_2:-71600964 Msa0620230:three_prime_UTR
TGCTCTATCAGTACCTTGGA+GGG 0.563387 4_2:-71602537 Msa0620230:CDS
ACCAATAAAATACCTGTCCA+AGG 0.563530 4_2:+71601654 None:intergenic
GAAAGCAATTCCTCAGTGAC+CGG 0.564416 4_2:+71606300 None:intergenic
GAAGGACCTTCTTTGAGCAT+CGG 0.566700 4_2:+71607107 None:intergenic
TCAAAGACAGGTTTACCCGC+TGG 0.570135 4_2:+71601037 None:intergenic
GACCATCAAAACATTCTCCA+AGG 0.571682 4_2:-71601228 Msa0620230:three_prime_UTR
GTCGTGAAACAGGTTGCGGT+TGG 0.571778 4_2:-71607205 Msa0620230:intron
GACCGTCAGATTAGGGTTTG+GGG 0.571834 4_2:-71607132 Msa0620230:CDS
TCTCAGGGCGCGGAGGAGAA+GGG 0.572989 4_2:+71607376 None:intergenic
GGGGTGCCGATGCTCAAAGA+AGG 0.577600 4_2:-71607113 Msa0620230:intron
AAAATACACTCGAGCCCGAT+AGG 0.578312 4_2:+71600773 None:intergenic
TATGATCTAGGTTCTCCAGC+GGG 0.583654 4_2:-71601052 Msa0620230:three_prime_UTR
GTTAATGGAAGTTGAATTCG+CGG 0.583732 4_2:+71607330 None:intergenic
AGTAATAGAGAAGTTTGAAG+AGG 0.585773 4_2:-71601933 Msa0620230:CDS
AATTAACCAGGTTTACCCGC+TGG 0.586277 4_2:+71600949 None:intergenic
AAGTTATAAAAGCCTCGTGA+TGG 0.589116 4_2:-71601015 Msa0620230:three_prime_UTR
GCGGAGGAGAAGGGAACTGT+CGG 0.589251 4_2:+71607385 None:intergenic
AGGATGCTCTATCAGTACCT+TGG 0.589322 4_2:-71602541 Msa0620230:CDS
AATTCCTAAACATACACACT+TGG 0.589713 4_2:-71600868 Msa0620230:three_prime_UTR
CTATGTTCTGGATTCTCCAG+CGG 0.598323 4_2:-71600965 Msa0620230:three_prime_UTR
GAACTGTCGGTGACTGTGAG+TGG 0.598402 4_2:+71607398 None:intergenic
GAGAAGTTTGAAGAGGCTGA+AGG 0.603485 4_2:-71601926 Msa0620230:CDS
GAGAATGAAAATTCGTCTCA+GGG 0.609737 4_2:+71607361 None:intergenic
CACCCCAAACCCTAATCTGA+CGG 0.611151 4_2:+71607130 None:intergenic
AGAGGCTGAAGGACGTAGTG+CGG 0.615684 4_2:-71601915 Msa0620230:CDS
CTCCTGTGAAGAGCCCTCCA+AGG 0.616479 4_2:+71602524 None:intergenic
ATCACAACAAAGCTGAGCAA+TGG 0.625931 4_2:+71606230 None:intergenic
TTCGGGACAGAACCATCATG+AGG 0.628267 4_2:+71601179 None:intergenic
TCCACAAAGACACGAACCAT+AGG 0.628657 4_2:+71606189 None:intergenic
TGTGCTGATTCAATTTGCGA+AGG 0.628672 4_2:+71600663 None:intergenic
CGGTGACTGTGAGTGGAATG+AGG 0.630545 4_2:+71607405 None:intergenic
ATGTATGAGTACAATTAACC+AGG 0.632707 4_2:+71600937 None:intergenic
TTATACACATTCTCATCAGG+AGG 0.644434 4_2:+71606261 None:intergenic
ACCATCAAAACATTCTCCAA+GGG 0.646004 4_2:-71601227 Msa0620230:three_prime_UTR
CGGTTGGAAATGAACGGCGA+CGG 0.646571 4_2:-71607189 Msa0620230:exon
GTGCTGATTCAATTTGCGAA+GGG 0.662799 4_2:+71600664 None:intergenic
GTATGTTTAGGAATTAGGAT+GGG 0.665857 4_2:+71600876 None:intergenic
AACAAATAAGCAGAAAATCG+CGG 0.667773 4_2:+71607308 None:intergenic
AATGAAAGGAACTATTGCTG+AGG 0.679461 4_2:-71606881 Msa0620230:intron
GTTGACTGTAGAGATTCTTG+CGG 0.683545 4_2:-71605793 Msa0620230:CDS
TTCAGAACAGAACCATCACG+AGG 0.685793 4_2:+71601003 None:intergenic
CCAATAACAGCAGAAACTGG+AGG 0.697573 4_2:+71601683 None:intergenic
TTATGATCTAGGTTCTCCAG+CGG 0.697682 4_2:-71601053 Msa0620230:three_prime_UTR
AAATTCGTCTCAGGGCGCGG+AGG 0.699412 4_2:+71607369 None:intergenic
AGGTTGCGGTTGGAAATGAA+CGG 0.718698 4_2:-71607195 Msa0620230:exon
TGACGATAGACCGGTCACTG+AGG 0.739868 4_2:-71606310 Msa0620230:CDS
AATCTGACGGTCATACAAAG+CGG 0.741130 4_2:+71607143 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATTAGCAAAAATT+AGG + chr4_2:71601039-71601058 None:intergenic 10.0%
!! TAAAATAAAGTTAAATTGTT+TGG - chr4_2:71601356-71601375 Msa0620230:three_prime_UTR 10.0%
!!! AAATAGAAAAAGTTTTTTAT+GGG + chr4_2:71606538-71606557 None:intergenic 10.0%
!!! AAAATAGAAAAAGTTTTTTA+TGG + chr4_2:71606539-71606558 None:intergenic 10.0%
!! TAGTAATTTAGAAAATAGAA+AGG + chr4_2:71600983-71601002 None:intergenic 15.0%
!!! TTTTTTCCTAATGATTTATT+AGG - chr4_2:71601662-71601681 Msa0620230:intron 15.0%
!!! ACTTGTTTTTTTTTTTTTTG+TGG - chr4_2:71601948-71601967 Msa0620230:intron 15.0%
!! TGAACAATTAAAATTACAAT+TGG + chr4_2:71602917-71602936 None:intergenic 15.0%
!! TCTTATAAAAAAAAATGGTT+TGG + chr4_2:71603289-71603308 None:intergenic 15.0%
!! AAAATCCTTTAATTAAACTT+AGG - chr4_2:71604868-71604887 Msa0620230:intron 15.0%
!! AAATCCTTTAATTAAACTTA+GGG - chr4_2:71604869-71604888 Msa0620230:intron 15.0%
!!! TCAAAATTATTGAATTTTGT+TGG - chr4_2:71605196-71605215 Msa0620230:intron 15.0%
!!! ATTTTAGTTTATTACTAGTC+TGG + chr4_2:71600634-71600653 None:intergenic 20.0%
!! AATTTAGAAAATAGAAAGGA+AGG + chr4_2:71600979-71600998 None:intergenic 20.0%
!!! TAAGTAACTTTTGTTAGTTT+AGG - chr4_2:71601007-71601026 Msa0620230:three_prime_UTR 20.0%
!!! AAAAGCTATTTCTATAACTA+AGG - chr4_2:71601332-71601351 Msa0620230:three_prime_UTR 20.0%
!! AAAAGAAAACAACTTGATAA+GGG + chr4_2:71601924-71601943 None:intergenic 20.0%
!! AAAAAGAAAACAACTTGATA+AGG + chr4_2:71601925-71601944 None:intergenic 20.0%
!!! AGACTTCAAGTTTTTTTTTT+CGG - chr4_2:71601973-71601992 Msa0620230:intron 20.0%
!! AGTATTCTTAATGATGTTTA+TGG - chr4_2:71602829-71602848 Msa0620230:intron 20.0%
!! AGATAAATGTGATATCAATT+CGG + chr4_2:71602944-71602963 None:intergenic 20.0%
!! GCAGTTCTTATAAAAAAAAA+TGG + chr4_2:71603294-71603313 None:intergenic 20.0%
!! AAAAGAGAAAAATCAGAAAA+TGG + chr4_2:71603415-71603434 None:intergenic 20.0%
!!! CAATTTTTATAGACATAGTT+CGG - chr4_2:71604441-71604460 Msa0620230:intron 20.0%
!!! GGATTTTTAACAAAAGATAA+AGG + chr4_2:71604855-71604874 None:intergenic 20.0%
!! TAATGTTACAATAGTAAATC+TGG + chr4_2:71606479-71606498 None:intergenic 20.0%
!! ATTTACTATTGTAACATTAC+AGG - chr4_2:71606480-71606499 Msa0620230:intron 20.0%
!!! AAACATAAGCTTTTTTTTTC+CGG + chr4_2:71606994-71607013 None:intergenic 20.0%
!!! TTTTTACTGTTGGTTAAGTT+TGG - chr4_2:71600791-71600810 Msa0620230:three_prime_UTR 25.0%
!! CGTTAAAGGAAATTTGAAAT+TGG + chr4_2:71600841-71600860 None:intergenic 25.0%
! TTAAACTGTTTATCCAAACA+TGG + chr4_2:71601267-71601286 None:intergenic 25.0%
!!! ACAGTTTAATTTGAAGCTTA+TGG - chr4_2:71601278-71601297 Msa0620230:three_prime_UTR 25.0%
! ACATAATTGCTTATGATAAG+TGG + chr4_2:71601402-71601421 None:intergenic 25.0%
! TTGTGAAAAACAAGTTATCT+TGG - chr4_2:71601483-71601502 Msa0620230:CDS 25.0%
! AAGAACCTGTAAGATAATTT+CGG + chr4_2:71601573-71601592 None:intergenic 25.0%
!! TTAAATAAGGCATTCCAAAA+AGG - chr4_2:71601609-71601628 Msa0620230:intron 25.0%
! CTAATGATTTATTAGGACTT+CGG - chr4_2:71601669-71601688 Msa0620230:CDS 25.0%
! AAAGAAAACAACTTGATAAG+GGG + chr4_2:71601923-71601942 None:intergenic 25.0%
!!! GACTTCAAGTTTTTTTTTTC+GGG - chr4_2:71601974-71601993 Msa0620230:intron 25.0%
! TCATATGATAACCAATAGTT+AGG - chr4_2:71602457-71602476 Msa0620230:intron 25.0%
! AAGAAGATAGTCAATGTAAA+GGG + chr4_2:71602558-71602577 None:intergenic 25.0%
! AAAGAAGATAGTCAATGTAA+AGG + chr4_2:71602559-71602578 None:intergenic 25.0%
! ATCATGAAAATAAATGCATG+GGG + chr4_2:71602598-71602617 None:intergenic 25.0%
! CATCATGAAAATAAATGCAT+GGG + chr4_2:71602599-71602618 None:intergenic 25.0%
! TCATCATGAAAATAAATGCA+TGG + chr4_2:71602600-71602619 None:intergenic 25.0%
!!! TGCATTTATTTTCATGATGA+TGG - chr4_2:71602600-71602619 Msa0620230:intron 25.0%
! ATTTATGACACTGATGAATA+TGG - chr4_2:71602648-71602667 Msa0620230:intron 25.0%
! ATTGATATCACATTTATCTC+AGG - chr4_2:71602945-71602964 Msa0620230:intron 25.0%
! CTAAAATGTTCATCACAATT+AGG - chr4_2:71602980-71602999 Msa0620230:intron 25.0%
! GTACTTCTAAACTATTGTTA+TGG + chr4_2:71603045-71603064 None:intergenic 25.0%
! TTCTAAACTATTGTTATGGT+CGG + chr4_2:71603041-71603060 None:intergenic 25.0%
! GTACTTCTAAACTATTGTTA+TGG + chr4_2:71603045-71603064 None:intergenic 25.0%
! AAAATTGTATAGAGACAGAT+CGG + chr4_2:71603259-71603278 None:intergenic 25.0%
!!! AACTGCTATACCATTTTTTT+TGG - chr4_2:71603308-71603327 Msa0620230:CDS 25.0%
! AGAAAAAGAATCAGAGATAT+GGG + chr4_2:71603337-71603356 None:intergenic 25.0%
! AAGAAAAAGAATCAGAGATA+TGG + chr4_2:71603338-71603357 None:intergenic 25.0%
! AATAGAGAGAATGAAAGAAA+AGG - chr4_2:71604285-71604304 Msa0620230:intron 25.0%
! ATAGAGAGAATGAAAGAAAA+GGG - chr4_2:71604286-71604305 Msa0620230:intron 25.0%
! CAAAAAAAGAATCAGATATG+TGG - chr4_2:71604369-71604388 Msa0620230:intron 25.0%
! GCAGTTCTTCATAAAATAAA+CGG - chr4_2:71604412-71604431 Msa0620230:intron 25.0%
! TCTTCATAAAATAAACGGTT+TGG - chr4_2:71604417-71604436 Msa0620230:intron 25.0%
!!! GCAATTTGTTACAAAGATAT+GGG + chr4_2:71604637-71604656 None:intergenic 25.0%
!!! AGCAATTTGTTACAAAGATA+TGG + chr4_2:71604638-71604657 None:intergenic 25.0%
! TTTAATGTTCAATTCTTCCT+TGG - chr4_2:71604728-71604747 Msa0620230:intron 25.0%
! TAAAATGCAACAATAATGAC+AGG + chr4_2:71604821-71604840 None:intergenic 25.0%
! AAGACCCTAAGTTTAATTAA+AGG + chr4_2:71604876-71604895 None:intergenic 25.0%
!! TTCCAATGATAGTTTTTATG+TGG - chr4_2:71604932-71604951 Msa0620230:intron 25.0%
! TTCCACATAAAAACTATCAT+TGG + chr4_2:71604937-71604956 None:intergenic 25.0%
! AAATAGAAGATCTGCAATTA+GGG - chr4_2:71605253-71605272 Msa0620230:intron 25.0%
! TGATCTTCTATGTATATGTT+TGG - chr4_2:71605299-71605318 Msa0620230:intron 25.0%
! GATCTTCTATGTATATGTTT+GGG - chr4_2:71605300-71605319 Msa0620230:intron 25.0%
! TGGATAAAATGTGTGAAATA+AGG - chr4_2:71605619-71605638 Msa0620230:intron 25.0%
!!! TAGTTGATTTGGTTTCATTT+TGG - chr4_2:71605815-71605834 Msa0620230:CDS 25.0%
!!! TTTTGGATTTACTGTTGATT+TGG - chr4_2:71605832-71605851 Msa0620230:CDS 25.0%
! TAAATATAACCAGCTTCTTT+CGG + chr4_2:71606907-71606926 None:intergenic 25.0%
! AAAGCTTATGTTTATGATCT+AGG - chr4_2:71607001-71607020 Msa0620230:intron 25.0%
!!! TTTGGTATTTTTGCAATGTT+TGG - chr4_2:71607312-71607331 Msa0620230:five_prime_UTR 25.0%
!!! TTGGTATTTTTGCAATGTTT+GGG - chr4_2:71607313-71607332 Msa0620230:five_prime_UTR 25.0%
! TTATTGTTCTCAGACAAATA+TGG - chr4_2:71607442-71607461 Msa0620230:five_prime_UTR 25.0%
AACAAATAAGCAGAAAATCG+CGG + chr4_2:71600760-71600779 None:intergenic 30.0%
!!! GTTTCTCACTTTTTTACTGT+TGG - chr4_2:71600781-71600800 Msa0620230:three_prime_UTR 30.0%
AAAGCTCATGTCTTAGTTTA+TGG - chr4_2:71601161-71601180 Msa0620230:three_prime_UTR 30.0%
GTCTTAGTTTATGGAATGAA+AGG - chr4_2:71601170-71601189 Msa0620230:three_prime_UTR 30.0%
AAACCTATCACTTGTCTATA+TGG - chr4_2:71601208-71601227 Msa0620230:three_prime_UTR 30.0%
TTACCATATAGACAAGTGAT+AGG + chr4_2:71601214-71601233 None:intergenic 30.0%
TGACTTAGACCAACATAATT+AGG - chr4_2:71601241-71601260 Msa0620230:three_prime_UTR 30.0%
TCAGTTGACAAGCTTAAATA+AGG - chr4_2:71601596-71601615 Msa0620230:intron 30.0%
CGAAGTCCTAATAAATCATT+AGG + chr4_2:71601671-71601690 None:intergenic 30.0%
! GTTTTGCAAGAATATTGTTC+TGG - chr4_2:71601707-71601726 Msa0620230:CDS 30.0%
ACTTAAAGACTTCAATCCTA+TGG - chr4_2:71601860-71601879 Msa0620230:CDS 30.0%
! AGCTTTGATGTAGAATTCTT+CGG - chr4_2:71602059-71602078 Msa0620230:intron 30.0%
AGTATAAAATGCTACACGTT+TGG + chr4_2:71602252-71602271 None:intergenic 30.0%
GCAGGACTATAAATATCAAA+AGG - chr4_2:71602313-71602332 Msa0620230:intron 30.0%
TCAAATTCGACATACATACT+CGG + chr4_2:71602408-71602427 None:intergenic 30.0%
TATGTATGTCGAATTTGAAC+CGG - chr4_2:71602410-71602429 Msa0620230:intron 30.0%
AACCAATAGTTAGGCATATA+CGG - chr4_2:71602466-71602485 Msa0620230:intron 30.0%
!!! TTGGTAACGCATTTTGTTTT+CGG + chr4_2:71602523-71602542 None:intergenic 30.0%
CTTAATGATGTTTATGGTAG+TGG - chr4_2:71602835-71602854 Msa0620230:intron 30.0%
!! ATAGTTTAGAAGTACTGAAC+TGG - chr4_2:71603050-71603069 Msa0620230:intron 30.0%
ATATGGGGAACCAAAAAAAA+TGG + chr4_2:71603321-71603340 None:intergenic 30.0%
GAAAAAGAATCAGAGATATG+GGG + chr4_2:71603336-71603355 None:intergenic 30.0%
AGAGAAAAATCAGAAAATGG+TGG + chr4_2:71603412-71603431 None:intergenic 30.0%
CTACAAATGATTGTATTACG+AGG - chr4_2:71603462-71603481 Msa0620230:intron 30.0%
!! ATGGAAGATGCAATTTTGAT+AGG - chr4_2:71603730-71603749 Msa0620230:intron 30.0%
AAAAATAGACTCTTAAGTCG+TGG + chr4_2:71603905-71603924 None:intergenic 30.0%
!! CGAGATTTTGATAGAAGATA+GGG + chr4_2:71603931-71603950 None:intergenic 30.0%
!! ACGAGATTTTGATAGAAGAT+AGG + chr4_2:71603932-71603951 None:intergenic 30.0%
TGAAGTTAGAACTTGAAGAA+TGG - chr4_2:71604096-71604115 Msa0620230:intron 30.0%
TTAAAAAAAAACGGTGGTGT+TGG - chr4_2:71604152-71604171 Msa0620230:intron 30.0%
TAGATTGGCAATGTGAAATT+AGG - chr4_2:71604206-71604225 Msa0620230:intron 30.0%
TTCTTCTTCAAACTATGCTA+CGG + chr4_2:71604267-71604286 None:intergenic 30.0%
GAATGAAAGAAAAGGGAAAA+TGG - chr4_2:71604293-71604312 Msa0620230:intron 30.0%
TGTTATAATGTTAGCTGAAC+CGG + chr4_2:71604481-71604500 None:intergenic 30.0%
CAGCTAACATTATAACAGTT+TGG - chr4_2:71604484-71604503 Msa0620230:intron 30.0%
!! TTGTAACAAATTGCTTTTGC+TGG - chr4_2:71604643-71604662 Msa0620230:intron 30.0%
!! TGTAACAAATTGCTTTTGCT+GGG - chr4_2:71604644-71604663 Msa0620230:intron 30.0%
! GTGCTAATTATCTAGAACTT+TGG + chr4_2:71604671-71604690 None:intergenic 30.0%
!! CAAAACTTGGATATTTTAGG+TGG + chr4_2:71604783-71604802 None:intergenic 30.0%
! CCTCAAAACTTGGATATTTT+AGG + chr4_2:71604786-71604805 None:intergenic 30.0%
! CCTAAAATATCCAAGTTTTG+AGG - chr4_2:71604783-71604802 Msa0620230:intron 30.0%
TCTAATGCAAGTAAATGACT+GGG + chr4_2:71605028-71605047 None:intergenic 30.0%
ATCTAATGCAAGTAAATGAC+TGG + chr4_2:71605029-71605048 None:intergenic 30.0%
TGAATTTAACATAACCCCAT+GGG + chr4_2:71605053-71605072 None:intergenic 30.0%
ATGAATTTAACATAACCCCA+TGG + chr4_2:71605054-71605073 None:intergenic 30.0%
AGAGAATCTAATGTACAACA+TGG + chr4_2:71605168-71605187 None:intergenic 30.0%
!!! TTGGTTTTGCTTTAAGACAA+TGG - chr4_2:71605215-71605234 Msa0620230:intron 30.0%
CAAATAGAAGATCTGCAATT+AGG - chr4_2:71605252-71605271 Msa0620230:intron 30.0%
!!! ATGAGTTTGTTTTGGACATA+AGG + chr4_2:71605396-71605415 None:intergenic 30.0%
!! TACATAGCATGAGTTTGTTT+TGG + chr4_2:71605404-71605423 None:intergenic 30.0%
! GTTTAGAACTTCATATTCCT+AGG - chr4_2:71605479-71605498 Msa0620230:intron 30.0%
! AAAAAGAAAAAGGCATACCT+AGG + chr4_2:71605499-71605518 None:intergenic 30.0%
ATCCTGTAGCAAAAAGAAAA+AGG + chr4_2:71605509-71605528 None:intergenic 30.0%
!!! TAAGCTATGCAACTTTTTTG+TGG - chr4_2:71605599-71605618 Msa0620230:intron 30.0%
TATTCAAGTCAATTAAGAGC+TGG - chr4_2:71605648-71605667 Msa0620230:intron 30.0%
AATTGCAATCGATAAACTTC+AGG + chr4_2:71606059-71606078 None:intergenic 30.0%
AGTAATAGAGAAGTTTGAAG+AGG - chr4_2:71606132-71606151 Msa0620230:intron 30.0%
!!! CTTTTTCAGCTTAAGAACAT+TGG + chr4_2:71606200-71606219 None:intergenic 30.0%
CAATGTTCTTAAGCTGAAAA+AGG - chr4_2:71606198-71606217 Msa0620230:CDS 30.0%
TGTAATGTAAACAGAAGGAT+TGG + chr4_2:71606295-71606314 None:intergenic 30.0%
! AGGTATTTTATTGGTCATCA+TGG - chr4_2:71606419-71606438 Msa0620230:intron 30.0%
TACTATTGTAACATTACAGG+AGG - chr4_2:71606483-71606502 Msa0620230:intron 30.0%
AGGTTATCAAAGCAATTTCT+GGG - chr4_2:71606503-71606522 Msa0620230:intron 30.0%
!!! TTCTATTTTGATGCTTCTGA+TGG - chr4_2:71606550-71606569 Msa0620230:intron 30.0%
!!! TCTATTTTGATGCTTCTGAT+GGG - chr4_2:71606551-71606570 Msa0620230:intron 30.0%
GACATATCTGATTCAAATAC+TGG - chr4_2:71606589-71606608 Msa0620230:intron 30.0%
GGAAATCTTGGTTGTTAATA+TGG - chr4_2:71606653-71606672 Msa0620230:intron 30.0%
AAATATAACCAGCTTCTTTC+GGG + chr4_2:71606906-71606925 None:intergenic 30.0%
AGCTGGTTATATTTATGTTC+TGG - chr4_2:71606912-71606931 Msa0620230:CDS 30.0%
GCTGGTTATATTTATGTTCT+GGG - chr4_2:71606913-71606932 Msa0620230:CDS 30.0%
! GCTTTTATAACTTCAAAGAC+AGG + chr4_2:71607043-71607062 None:intergenic 30.0%
ATGTATGAGTACAATTAACC+AGG + chr4_2:71607131-71607150 None:intergenic 30.0%
GTATGTTTAGGAATTAGGAT+GGG + chr4_2:71607192-71607211 None:intergenic 30.0%
TGTATGTTTAGGAATTAGGA+TGG + chr4_2:71607193-71607212 None:intergenic 30.0%
AGTGTGTATGTTTAGGAATT+AGG + chr4_2:71607197-71607216 None:intergenic 30.0%
AATTCCTAAACATACACACT+TGG - chr4_2:71607197-71607216 Msa0620230:intron 30.0%
AAATCCATTTAGTACTCTAC+TGG - chr4_2:71607361-71607380 Msa0620230:five_prime_UTR 30.0%
! TAATCCAGTAGAGTACTAAA+TGG + chr4_2:71607368-71607387 None:intergenic 30.0%
GAGAATGAAAATTCGTCTCA+GGG + chr4_2:71600707-71600726 None:intergenic 35.0%
TGAGAATGAAAATTCGTCTC+AGG + chr4_2:71600708-71600727 None:intergenic 35.0%
GTTAATGGAAGTTGAATTCG+CGG + chr4_2:71600738-71600757 None:intergenic 35.0%
TTTGTATGACCGTCAGATTA+GGG - chr4_2:71600926-71600945 Msa0620230:three_prime_UTR 35.0%
AATGAAAGGAACTATTGCTG+AGG - chr4_2:71601184-71601203 Msa0620230:three_prime_UTR 35.0%
CAAACATGGCCTAATTATGT+TGG + chr4_2:71601253-71601272 None:intergenic 35.0%
CAACATAATTAGGCCATGTT+TGG - chr4_2:71601251-71601270 Msa0620230:three_prime_UTR 35.0%
GTTCTCCGAAATTATCTTAC+AGG - chr4_2:71601565-71601584 Msa0620230:CDS 35.0%
! TTTCACACACTAAGCCTTTT+TGG + chr4_2:71601626-71601645 None:intergenic 35.0%
AAAAGGCTTAGTGTGTGAAA+TGG - chr4_2:71601626-71601645 Msa0620230:intron 35.0%
AAAGGCTTAGTGTGTGAAAT+GGG - chr4_2:71601627-71601646 Msa0620230:intron 35.0%
TTATACACATTCTCATCAGG+AGG + chr4_2:71601807-71601826 None:intergenic 35.0%
CCATTATACACATTCTCATC+AGG + chr4_2:71601810-71601829 None:intergenic 35.0%
CCTGATGAGAATGTGTATAA+TGG - chr4_2:71601807-71601826 Msa0620230:intron 35.0%
AAAACAACTTGATAAGGGGA+GGG + chr4_2:71601919-71601938 None:intergenic 35.0%
! AAGGAGTTTTCACTGTACTT+TGG + chr4_2:71602126-71602145 None:intergenic 35.0%
AGTAGCAAAAACATGGAAGA+AGG + chr4_2:71602145-71602164 None:intergenic 35.0%
AACTAGCCAATGAAAAATGC+CGG - chr4_2:71602219-71602238 Msa0620230:intron 35.0%
! TGAAGTTTTTGTTGATCTGC+AGG - chr4_2:71602295-71602314 Msa0620230:intron 35.0%
TGTGACAAATTAGATCCACA+GGG + chr4_2:71602345-71602364 None:intergenic 35.0%
AACAAGAGATCAATTGTGAC+CGG + chr4_2:71602432-71602451 None:intergenic 35.0%
ATCCGTATATGCCTAACTAT+TGG + chr4_2:71602471-71602490 None:intergenic 35.0%
TAAAGGGAAGTAACACAGTT+TGG + chr4_2:71602542-71602561 None:intergenic 35.0%
AATAAATGCATGGGGATTGA+CGG + chr4_2:71602590-71602609 None:intergenic 35.0%
TAAAGTCATCATCGTCTGTA+AGG - chr4_2:71602682-71602701 Msa0620230:intron 35.0%
!!! ATTTTCCCTTACTGACTTCT+AGG + chr4_2:71602734-71602753 None:intergenic 35.0%
AGTCAGTAAGGGAAAATTTG+AGG - chr4_2:71602737-71602756 Msa0620230:intron 35.0%
GTTTCCTGCTTTATGTGATT+TGG + chr4_2:71602764-71602783 None:intergenic 35.0%
!! TGATGTTTATGGTAGTGGAT+AGG - chr4_2:71602840-71602859 Msa0620230:intron 35.0%
! CAGTTAATTTCAGTGCGTTT+TGG + chr4_2:71602892-71602911 None:intergenic 35.0%
ATCACAATTAGGACTGTTCA+TGG - chr4_2:71602991-71603010 Msa0620230:intron 35.0%
ATCAAACCACTAATCCAGTT+CGG + chr4_2:71603101-71603120 None:intergenic 35.0%
!! ATAGTTTAGAAGTACTGACC+TGG - chr4_2:71603159-71603178 Msa0620230:intron 35.0%
AATCCAGTTCAGTTCAGTTT+GGG + chr4_2:71603199-71603218 None:intergenic 35.0%
TAATCCAGTTCAGTTCAGTT+TGG + chr4_2:71603200-71603219 None:intergenic 35.0%
AAGCGGTGATGTGAAAAATT+GGG + chr4_2:71603378-71603397 None:intergenic 35.0%
GATGACACTTCATCATTGTT+CGG + chr4_2:71603638-71603657 None:intergenic 35.0%
! TCATCGACTATGATGATGAA+GGG - chr4_2:71603653-71603672 Msa0620230:intron 35.0%
TGCATCTTCCATTCTATCTA+CGG + chr4_2:71603722-71603741 None:intergenic 35.0%
GAAACAATACTCTTAAGTCG+TGG - chr4_2:71603763-71603782 Msa0620230:intron 35.0%
TTGGCAATGTGAAATTAGGA+AGG - chr4_2:71604210-71604229 Msa0620230:intron 35.0%
TGGCAATGTGAAATTAGGAA+GGG - chr4_2:71604211-71604230 Msa0620230:intron 35.0%
TCTTCTTCAAACTATGCTAC+GGG + chr4_2:71604266-71604285 None:intergenic 35.0%
TGAAAGAAAAGGGAAAATGG+TGG - chr4_2:71604296-71604315 Msa0620230:intron 35.0%
! ACTCCTAATTTTTCACACCA+CGG + chr4_2:71604335-71604354 None:intergenic 35.0%
AGATATGGGCAAAACAAACA+AGG + chr4_2:71604623-71604642 None:intergenic 35.0%
TTCTAGATAATTAGCACCTG+TGG - chr4_2:71604674-71604693 Msa0620230:intron 35.0%
TCTTCCTTGGCAGAAAAAAA+TGG - chr4_2:71604741-71604760 Msa0620230:intron 35.0%
!!! ATCCAAGTTTTGAGGTATGT+AGG - chr4_2:71604791-71604810 Msa0620230:intron 35.0%
AACCTACATACCTCAAAACT+TGG + chr4_2:71604796-71604815 None:intergenic 35.0%
GAACATATTGAGAGTCTTTG+GGG + chr4_2:71604915-71604934 None:intergenic 35.0%
GGAACATATTGAGAGTCTTT+GGG + chr4_2:71604916-71604935 None:intergenic 35.0%
TGGAACATATTGAGAGTCTT+TGG + chr4_2:71604917-71604936 None:intergenic 35.0%
ATGTGATAACCTTGACATGA+AGG - chr4_2:71604970-71604989 Msa0620230:intron 35.0%
ACCTTGACATGAAGGATATT+TGG - chr4_2:71604978-71604997 Msa0620230:intron 35.0%
ACCAAATATCCTTCATGTCA+AGG + chr4_2:71604982-71605001 None:intergenic 35.0%
TGTACATTAGATTCTCTTGC+AGG - chr4_2:71605171-71605190 Msa0620230:intron 35.0%
CATAGAAGATCAACACAGAA+TGG + chr4_2:71605291-71605310 None:intergenic 35.0%
!!! CTTGTGTGTTTGTTTTGCAA+TGG + chr4_2:71605344-71605363 None:intergenic 35.0%
ACAAACACACAAGCTTCAAA+AGG - chr4_2:71605351-71605370 Msa0620230:intron 35.0%
! TGCCTTTTTCTTTTTGCTAC+AGG - chr4_2:71605504-71605523 Msa0620230:intron 35.0%
GGTGTCTGGTCTAATATATT+AGG - chr4_2:71605685-71605704 Msa0620230:intron 35.0%
!!! TTCACGGGTTAGTTTAGTTT+TGG - chr4_2:71605766-71605785 Msa0620230:CDS 35.0%
ATCAACTAAAGCAATCAGGT+TGG + chr4_2:71605803-71605822 None:intergenic 35.0%
CCAAATCAACTAAAGCAATC+AGG + chr4_2:71605807-71605826 None:intergenic 35.0%
CCTGATTGCTTTAGTTGATT+TGG - chr4_2:71605804-71605823 Msa0620230:CDS 35.0%
!! CTGTTGATTTGGTTTCATCT+CGG - chr4_2:71605843-71605862 Msa0620230:CDS 35.0%
AGTATAGAAACATGCCCTAA+TGG - chr4_2:71605976-71605995 Msa0620230:CDS 35.0%
GAGACTGTAATGTAAACAGA+AGG + chr4_2:71606300-71606319 None:intergenic 35.0%
!! AATCTTTCCAGAAGAGTATC+AGG + chr4_2:71606340-71606359 None:intergenic 35.0%
! TGATACTCTTCTGGAAAGAT+TGG - chr4_2:71606339-71606358 Msa0620230:CDS 35.0%
! TCCTTGGACAGGTATTTTAT+TGG - chr4_2:71606410-71606429 Msa0620230:intron 35.0%
ACCAATAAAATACCTGTCCA+AGG + chr4_2:71606414-71606433 None:intergenic 35.0%
GAGGTTATCAAAGCAATTTC+TGG - chr4_2:71606502-71606521 Msa0620230:intron 35.0%
! ATCAAAGCAATTTCTGGGAA+AGG - chr4_2:71606508-71606527 Msa0620230:intron 35.0%
! TCAAAGCAATTTCTGGGAAA+GGG - chr4_2:71606509-71606528 Msa0620230:intron 35.0%
! TGTTTCTTTTTCTGAGTCAC+TGG - chr4_2:71606632-71606651 Msa0620230:intron 35.0%
!! ATTTAGAGCGTTGACGATTT+AGG - chr4_2:71606770-71606789 Msa0620230:intron 35.0%
!! TTTAGAGCGTTGACGATTTA+GGG - chr4_2:71606771-71606790 Msa0620230:intron 35.0%
ACCATCAAAACATTCTCCAA+GGG - chr4_2:71606838-71606857 Msa0620230:intron 35.0%
GAAGTTACAAATCCTCATGA+TGG - chr4_2:71606874-71606893 Msa0620230:intron 35.0%
AACTTCAAAGACAGGTTTAC+CGG + chr4_2:71606947-71606966 None:intergenic 35.0%
!! ACCTGTCTTTGAAGTTAGAA+AGG - chr4_2:71606951-71606970 Msa0620230:intron 35.0%
AAGTTATAAAAGCCTCGTGA+TGG - chr4_2:71607050-71607069 Msa0620230:intron 35.0%
!! AGCTTGTTATGTCTATGTTC+TGG - chr4_2:71607088-71607107 Msa0620230:intron 35.0%
AAGCAGAAAATCGCGGTTAA+TGG + chr4_2:71600753-71600772 None:intergenic 40.0%
TTCCTTTAACGTCGTGAAAC+AGG - chr4_2:71600850-71600869 Msa0620230:three_prime_UTR 40.0%
AACCTGTTTCACGACGTTAA+AGG + chr4_2:71600855-71600874 None:intergenic 40.0%
AATCTGACGGTCATACAAAG+CGG + chr4_2:71600925-71600944 None:intergenic 40.0%
CTTTGTATGACCGTCAGATT+AGG - chr4_2:71600925-71600944 Msa0620230:three_prime_UTR 40.0%
TGCAAGAATATTGTTCTGGC+TGG - chr4_2:71601711-71601730 Msa0620230:CDS 40.0%
! AATATTGTTCTGGCTGGAGT+TGG - chr4_2:71601717-71601736 Msa0620230:CDS 40.0%
GACCTTAATTGACGATAGAC+CGG - chr4_2:71601746-71601765 Msa0620230:CDS 40.0%
ATCACAACAAAGCTGAGCAA+TGG + chr4_2:71601838-71601857 None:intergenic 40.0%
GTTCGTGTCTTTGTGGATAA+AGG - chr4_2:71601882-71601901 Msa0620230:CDS 40.0%
AAACAACTTGATAAGGGGAG+GGG + chr4_2:71601918-71601937 None:intergenic 40.0%
GAAAACAACTTGATAAGGGG+AGG + chr4_2:71601920-71601939 None:intergenic 40.0%
GACAAGACGAACAAAAGAGA+AGG + chr4_2:71602023-71602042 None:intergenic 40.0%
! CTTTTGTTCGTCTTGTCTTC+AGG - chr4_2:71602026-71602045 Msa0620230:intron 40.0%
!! CTTCCATGTTTTTGCTACTC+TGG - chr4_2:71602146-71602165 Msa0620230:intron 40.0%
AAGCCAGAGTAGCAAAAACA+TGG + chr4_2:71602152-71602171 None:intergenic 40.0%
! AGCTTTCCGGCATTTTTCAT+TGG + chr4_2:71602228-71602247 None:intergenic 40.0%
GTTGACTGTAGAGATTCTTG+CGG - chr4_2:71602272-71602291 Msa0620230:intron 40.0%
GTGACAAATTAGATCCACAG+GGG + chr4_2:71602344-71602363 None:intergenic 40.0%
CTGTGACAAATTAGATCCAC+AGG + chr4_2:71602346-71602365 None:intergenic 40.0%
AGGCTCTATCACTAATTGCA+AGG + chr4_2:71602714-71602733 None:intergenic 40.0%
ATAGAGCCTAGAAGTCAGTA+AGG - chr4_2:71602725-71602744 Msa0620230:intron 40.0%
TAGAGCCTAGAAGTCAGTAA+GGG - chr4_2:71602726-71602745 Msa0620230:intron 40.0%
AGGACCAAATCACATAAAGC+AGG - chr4_2:71602757-71602776 Msa0620230:intron 40.0%
!!! AGTTGGGCAGTTTTTTTACC+AGG + chr4_2:71602866-71602885 None:intergenic 40.0%
AATCCAGTTCGGTTCAGTTT+GGG + chr4_2:71603090-71603109 None:intergenic 40.0%
TAATCCAGTTCGGTTCAGTT+TGG + chr4_2:71603091-71603110 None:intergenic 40.0%
!! GAACTGGATTAGTGGTTTGA+TGG - chr4_2:71603100-71603119 Msa0620230:intron 40.0%
ATCCAGTTCAGTTCAGTTTG+GGG + chr4_2:71603198-71603217 None:intergenic 40.0%
! ACTGAACTGAACTGGATTAG+CGG - chr4_2:71603201-71603220 Msa0620230:intron 40.0%
GTGATGTGAAAAATTGGGAG+TGG + chr4_2:71603373-71603392 None:intergenic 40.0%
GAAGCGGTGATGTGAAAAAT+TGG + chr4_2:71603379-71603398 None:intergenic 40.0%
CGAGGTTTAGAAGAAGACAA+TGG - chr4_2:71603480-71603499 Msa0620230:intron 40.0%
GTGAAATTGTGAAGGGGTTT+GGG + chr4_2:71603514-71603533 None:intergenic 40.0%
TGTGAAATTGTGAAGGGGTT+TGG + chr4_2:71603515-71603534 None:intergenic 40.0%
!! TGGTGCTGTGAAATTGTGAA+GGG + chr4_2:71603521-71603540 None:intergenic 40.0%
!! TTGGTGCTGTGAAATTGTGA+AGG + chr4_2:71603522-71603541 None:intergenic 40.0%
TTTCACAGCACCAATGTCAT+CGG - chr4_2:71603528-71603547 Msa0620230:intron 40.0%
TGAACAGCAATTGATACTGC+TGG + chr4_2:71603562-71603581 None:intergenic 40.0%
! GCAGTATCAATTGCTGTTCA+AGG - chr4_2:71603562-71603581 Msa0620230:intron 40.0%
!! GTGGGTGGTCATTGATTTAT+TGG + chr4_2:71603595-71603614 None:intergenic 40.0%
GGAAACAACCACTTGATTAG+GGG + chr4_2:71603617-71603636 None:intergenic 40.0%
CGGAAACAACCACTTGATTA+GGG + chr4_2:71603618-71603637 None:intergenic 40.0%
TCGGAAACAACCACTTGATT+AGG + chr4_2:71603619-71603638 None:intergenic 40.0%
! GTCATCGACTATGATGATGA+AGG - chr4_2:71603652-71603671 Msa0620230:intron 40.0%
AGAGAAGTTGCCGGATTATT+TGG - chr4_2:71603690-71603709 Msa0620230:intron 40.0%
ATCTTCCATTCTATCTACGG+CGG + chr4_2:71603719-71603738 None:intergenic 40.0%
AGAGTGACAGTGTGTACAAA+TGG - chr4_2:71603792-71603811 Msa0620230:intron 40.0%
ATGACGGTGAGTACAAATTG+TGG + chr4_2:71603873-71603892 None:intergenic 40.0%
ATCAACTTCTTCCTCACATC+TGG - chr4_2:71603987-71604006 Msa0620230:intron 40.0%
ATTGTTCAGAACCAATCGCT+TGG - chr4_2:71604051-71604070 Msa0620230:intron 40.0%
ACGGCGGCGTTAAAAAAAAA+CGG - chr4_2:71604143-71604162 Msa0620230:intron 40.0%
ACATTGCCAATCTACAAGTG+GGG + chr4_2:71604200-71604219 None:intergenic 40.0%
CACATTGCCAATCTACAAGT+GGG + chr4_2:71604201-71604220 None:intergenic 40.0%
TCACATTGCCAATCTACAAG+TGG + chr4_2:71604202-71604221 None:intergenic 40.0%
GGCAATGTGAAATTAGGAAG+GGG - chr4_2:71604212-71604231 Msa0620230:intron 40.0%
CTTCTTCAAACTATGCTACG+GGG + chr4_2:71604265-71604284 None:intergenic 40.0%
GTGGTGTGAAAAATTAGGAG+TGG - chr4_2:71604334-71604353 Msa0620230:intron 40.0%
TTCGGTTCAAAATTCAGAGC+CGG - chr4_2:71604459-71604478 Msa0620230:intron 40.0%
! TTGGTTCTTCACCACTGTTA+TGG - chr4_2:71604503-71604522 Msa0620230:intron 40.0%
ACTGAACAGAACCATAACAG+TGG + chr4_2:71604517-71604536 None:intergenic 40.0%
ACAAACTACAATCGACAGCT+AGG + chr4_2:71604561-71604580 None:intergenic 40.0%
! AGCTGTCGATTGTAGTTTGT+TGG - chr4_2:71604561-71604580 Msa0620230:intron 40.0%
TCCTTGGCAGAAAAAAATGG+AGG - chr4_2:71604744-71604763 Msa0620230:intron 40.0%
!!! TCCTCCATTTTTTTCTGCCA+AGG + chr4_2:71604748-71604767 None:intergenic 40.0%
!! ATATTGAGAGTCTTTGGGGT+TGG + chr4_2:71604911-71604930 None:intergenic 40.0%
TTACTTGCATTAGATGCCCA+TGG - chr4_2:71605034-71605053 Msa0620230:intron 40.0%
TACTTGCATTAGATGCCCAT+GGG - chr4_2:71605035-71605054 Msa0620230:intron 40.0%
! TCCTTTTCCTGTCATGTACT+AGG - chr4_2:71605132-71605151 Msa0620230:intron 40.0%
ACCTAGTACATGACAGGAAA+AGG + chr4_2:71605136-71605155 None:intergenic 40.0%
AAGCTGTACTTTGCAATGAG+AGG - chr4_2:71605571-71605590 Msa0620230:intron 40.0%
!! GAGCTGGAACTTTTAGTTGA+CGG - chr4_2:71605664-71605683 Msa0620230:intron 40.0%
!! AACTTTTAGTTGACGGTGTC+TGG - chr4_2:71605671-71605690 Msa0620230:intron 40.0%
ACTAAGTTAAGCCAAGAGAG+AGG - chr4_2:71605729-71605748 Msa0620230:intron 40.0%
TAAGCTCTCTCTCTCCATTA+GGG + chr4_2:71605993-71606012 None:intergenic 40.0%
CTCCAGTTTCTGCTGTTATT+GGG - chr4_2:71606383-71606402 Msa0620230:intron 40.0%
TCCAGTTTCTGCTGTTATTG+GGG - chr4_2:71606384-71606403 Msa0620230:intron 40.0%
! CAAAGCAATTTCTGGGAAAG+GGG - chr4_2:71606510-71606529 Msa0620230:intron 40.0%
! TTTTGATGCTTCTGATGGGA+AGG - chr4_2:71606555-71606574 Msa0620230:intron 40.0%
TTTGATGCTTCTGATGGGAA+GGG - chr4_2:71606556-71606575 Msa0620230:intron 40.0%
TACTGGAAAGTGACATCTCT+AGG - chr4_2:71606606-71606625 Msa0620230:intron 40.0%
TTCTGAGTCACTGGAAATCT+TGG - chr4_2:71606641-71606660 Msa0620230:intron 40.0%
GACCATCAAAACATTCTCCA+AGG - chr4_2:71606837-71606856 Msa0620230:intron 40.0%
GCCTTTCTAACTTCAAAGAC+AGG + chr4_2:71606955-71606974 None:intergenic 40.0%
GAAGTTAGAAAGGCTTGTGA+TGG - chr4_2:71606961-71606980 Msa0620230:intron 40.0%
TTATGATCTAGGTTCTCCAG+CGG - chr4_2:71607012-71607031 Msa0620230:intron 40.0%
TCGTCCAAGTGTGTATGTTT+AGG + chr4_2:71607204-71607223 None:intergenic 40.0%
GGCAGTGTTAAGGAGTAAAA+TGG + chr4_2:71607261-71607280 None:intergenic 40.0%
!! GTGCTGATTCAATTTGCGAA+GGG + chr4_2:71607404-71607423 None:intergenic 40.0%
!! TGTGCTGATTCAATTTGCGA+AGG + chr4_2:71607405-71607424 None:intergenic 40.0%
TAACGTCGTGAAACAGGTTG+CGG - chr4_2:71600856-71600875 Msa0620230:three_prime_UTR 45.0%
AGGTTGCGGTTGGAAATGAA+CGG - chr4_2:71600870-71600889 Msa0620230:three_prime_UTR 45.0%
ATGACCGTCAGATTAGGGTT+TGG - chr4_2:71600931-71600950 Msa0620230:three_prime_UTR 45.0%
TGACCGTCAGATTAGGGTTT+GGG - chr4_2:71600932-71600951 Msa0620230:three_prime_UTR 45.0%
GAAGGACCTTCTTTGAGCAT+CGG + chr4_2:71600961-71600980 None:intergenic 45.0%
GACCGGTCTATCGTCAATTA+AGG + chr4_2:71601751-71601770 None:intergenic 45.0%
GAAAGCAATTCCTCAGTGAC+CGG + chr4_2:71601768-71601787 None:intergenic 45.0%
TCCTATGGTTCGTGTCTTTG+TGG - chr4_2:71601875-71601894 Msa0620230:CDS 45.0%
TCCACAAAGACACGAACCAT+AGG + chr4_2:71601879-71601898 None:intergenic 45.0%
CTACACGTTTGGAAGCTTTC+CGG + chr4_2:71602241-71602260 None:intergenic 45.0%
ACAAATTAGATCCACAGGGG+TGG + chr4_2:71602341-71602360 None:intergenic 45.0%
AGGAAACCTAGAGAACGCAA+AGG - chr4_2:71602777-71602796 Msa0620230:intron 45.0%
AACCTAGAGAACGCAAAGGT+TGG - chr4_2:71602781-71602800 Msa0620230:intron 45.0%
ACCTAGAGAACGCAAAGGTT+GGG - chr4_2:71602782-71602801 Msa0620230:intron 45.0%
CAAAGGTTGGGATGGATGAA+AGG - chr4_2:71602794-71602813 Msa0620230:intron 45.0%
!! TTTATGGTAGTGGATAGGCC+TGG - chr4_2:71602845-71602864 Msa0620230:intron 45.0%
!!! CAGTGCGTTTTGGTTCAGTT+GGG + chr4_2:71602882-71602901 None:intergenic 45.0%
!!! TCAGTGCGTTTTGGTTCAGT+TGG + chr4_2:71602883-71602902 None:intergenic 45.0%
ATCCAGTTCGGTTCAGTTTG+GGG + chr4_2:71603089-71603108 None:intergenic 45.0%
! ACTGAACCGAACTGGATTAG+TGG - chr4_2:71603092-71603111 Msa0620230:intron 45.0%
! GGATTAGTGGTTTGATGGAG+CGG - chr4_2:71603105-71603124 Msa0620230:intron 45.0%
TGGGGTATAACTAACTGTCC+AGG + chr4_2:71603071-71603090 None:intergenic 45.0%
TACCCCAAACTGAACTGAAC+TGG - chr4_2:71603193-71603212 Msa0620230:intron 45.0%
!! GAACTGGATTAGCGGTTTGA+TGG - chr4_2:71603209-71603228 Msa0620230:intron 45.0%
!!! TGGTGGTTTTGAGAGTGAAG+CGG + chr4_2:71603395-71603414 None:intergenic 45.0%
! GGTGCTGTGAAATTGTGAAG+GGG + chr4_2:71603520-71603539 None:intergenic 45.0%
ACAACCACTTGATTAGGGGT+GGG + chr4_2:71603613-71603632 None:intergenic 45.0%
AACAACCACTTGATTAGGGG+TGG + chr4_2:71603614-71603633 None:intergenic 45.0%
AGTTGTGAGAGAGAAGTTGC+CGG - chr4_2:71603681-71603700 Msa0620230:intron 45.0%
ACGGCGGTTTCCAAATAATC+CGG + chr4_2:71603703-71603722 None:intergenic 45.0%
GTCGTGGAATCTGAGAATGA+CGG + chr4_2:71603889-71603908 None:intergenic 45.0%
GTCTTTCATTCTATCCGCAG+CGG - chr4_2:71603950-71603969 Msa0620230:intron 45.0%
GCATGATCTATAAACCGCTG+CGG + chr4_2:71603967-71603986 None:intergenic 45.0%
ATGAAGGGATTCCAGATGTG+AGG + chr4_2:71604001-71604020 None:intergenic 45.0%
! ATGGCGGCAATGATGATGAA+GGG + chr4_2:71604016-71604035 None:intergenic 45.0%
TCAGAACCAATCGCTTGGTT+AGG - chr4_2:71604056-71604075 Msa0620230:intron 45.0%
ATCGCTGCAGGTTAAAGCAA+CGG - chr4_2:71604124-71604143 Msa0620230:intron 45.0%
GCGGCGTTAAAAAAAAACGG+TGG - chr4_2:71604146-71604165 Msa0620230:intron 45.0%
TGAGTTCCCCACTTGTAGAT+TGG - chr4_2:71604191-71604210 Msa0620230:intron 45.0%
GAGCCGTGGTGTGAAAAATT+AGG - chr4_2:71604329-71604348 Msa0620230:intron 45.0%
AAAGCAAGCACAGTATCCAC+AGG + chr4_2:71604693-71604712 None:intergenic 45.0%
! TGGTGCACTGATAACCTTGA+TGG - chr4_2:71604998-71605017 Msa0620230:intron 45.0%
AATGACTGGGTAAGCCATCA+AGG + chr4_2:71605015-71605034 None:intergenic 45.0%
ACTTGCATTAGATGCCCATG+GGG - chr4_2:71605036-71605055 Msa0620230:intron 45.0%
TCCTGTCATGTACTAGGTCT+AGG - chr4_2:71605138-71605157 Msa0620230:intron 45.0%
ACCTAGACCTAGTACATGAC+AGG + chr4_2:71605142-71605161 None:intergenic 45.0%
AGGATGCTCTATCAGTACCT+TGG - chr4_2:71605524-71605543 Msa0620230:intron 45.0%
ATGCTCTATCAGTACCTTGG+AGG - chr4_2:71605527-71605546 Msa0620230:intron 45.0%
TGCTCTATCAGTACCTTGGA+GGG - chr4_2:71605528-71605547 Msa0620230:intron 45.0%
AAGTTAAGCCAAGAGAGAGG+TGG - chr4_2:71605732-71605751 Msa0620230:intron 45.0%
GTAAGCTCTCTCTCTCCATT+AGG + chr4_2:71605994-71606013 None:intergenic 45.0%
GAGAAGTTTGAAGAGGCTGA+AGG - chr4_2:71606139-71606158 Msa0620230:intron 45.0%
! AAAGGAGCTTTGTACTGCAC+AGG - chr4_2:71606216-71606235 Msa0620230:CDS 45.0%
! ACAGGTATGCTTGCTGGAAT+TGG - chr4_2:71606234-71606253 Msa0620230:CDS 45.0%
TCATGTGCCTGATACTCTTC+TGG - chr4_2:71606330-71606349 Msa0620230:CDS 45.0%
CCAATAACAGCAGAAACTGG+AGG + chr4_2:71606385-71606404 None:intergenic 45.0%
CCTCCAGTTTCTGCTGTTAT+TGG - chr4_2:71606382-71606401 Msa0620230:intron 45.0%
CCAGTTTCTGCTGTTATTGG+GGG - chr4_2:71606385-71606404 Msa0620230:intron 45.0%
!! GCCCTTGGAGAATGTTTTGA+TGG + chr4_2:71606842-71606861 None:intergenic 45.0%
TTCAAAAGACAGCTTGCCCT+TGG + chr4_2:71606857-71606876 None:intergenic 45.0%
TATGATCTAGGTTCTCCAGC+GGG - chr4_2:71607013-71607032 Msa0620230:intron 45.0%
TTCAGAACAGAACCATCACG+AGG + chr4_2:71607065-71607084 None:intergenic 45.0%
! CTATGTTCTGGATTCTCCAG+CGG - chr4_2:71607100-71607119 Msa0620230:intron 45.0%
! TATGTTCTGGATTCTCCAGC+GGG - chr4_2:71607101-71607120 Msa0620230:intron 45.0%
AATTAACCAGGTTTACCCGC+TGG + chr4_2:71607119-71607138 None:intergenic 45.0%
GACTGTTGTTGGCAGTGTTA+AGG + chr4_2:71607271-71607290 None:intergenic 45.0%
TGCCAACAACAGTCACCTAT+CGG - chr4_2:71607277-71607296 Msa0620230:intron 45.0%
AAAATACACTCGAGCCCGAT+AGG + chr4_2:71607295-71607314 None:intergenic 45.0%
! TATCGGGCTCGAGTGTATTT+TGG - chr4_2:71607294-71607313 Msa0620230:intron 45.0%
TGAAAATTCGTCTCAGGGCG+CGG + chr4_2:71600702-71600721 None:intergenic 50.0%
GACCGTCAGATTAGGGTTTG+GGG - chr4_2:71600933-71600952 Msa0620230:three_prime_UTR 50.0%
CACCCCAAACCCTAATCTGA+CGG + chr4_2:71600938-71600957 None:intergenic 50.0%
!! ATCAAAAGGTACCACCCCTG+TGG - chr4_2:71602327-71602346 Msa0620230:intron 50.0%
TCCCAACCTTTGCGTTCTCT+AGG + chr4_2:71602786-71602805 None:intergenic 50.0%
AGAGAACGCAAAGGTTGGGA+TGG - chr4_2:71602786-71602805 Msa0620230:intron 50.0%
TACCCCAAACTGAACCGAAC+TGG - chr4_2:71603084-71603103 Msa0620230:intron 50.0%
! GGATTAGCGGTTTGATGGAG+CGG - chr4_2:71603214-71603233 Msa0620230:intron 50.0%
GGTTGAAGCTCCGATGACAT+TGG + chr4_2:71603541-71603560 None:intergenic 50.0%
GGAAACCGCCGTAGATAGAA+TGG - chr4_2:71603711-71603730 Msa0620230:intron 50.0%
! GATGGCGGCAATGATGATGA+AGG + chr4_2:71604017-71604036 None:intergenic 50.0%
ATCATCATTGCCGCCATCGA+TGG - chr4_2:71604019-71604038 Msa0620230:intron 50.0%
CAATGACGAAGAGCCATCGA+TGG + chr4_2:71604035-71604054 None:intergenic 50.0%
ACCAATCGCTTGGTTAGGTG+TGG - chr4_2:71604061-71604080 Msa0620230:intron 50.0%
ACCACACCTAACCAAGCGAT+TGG + chr4_2:71604065-71604084 None:intergenic 50.0%
AGAATGGTGATCATCGCTGC+AGG - chr4_2:71604112-71604131 Msa0620230:intron 50.0%
! GGTGGAGAGCAAGGTATTCA+CGG - chr4_2:71605750-71605769 Msa0620230:intron 50.0%
! GTGGAGAGCAAGGTATTCAC+GGG - chr4_2:71605751-71605770 Msa0620230:intron 50.0%
TACTGCACAGGTATGCTTGC+TGG - chr4_2:71606228-71606247 Msa0620230:CDS 50.0%
CCCCCAATAACAGCAGAAAC+TGG + chr4_2:71606388-71606407 None:intergenic 50.0%
TTCGGGACAGAACCATCATG+AGG + chr4_2:71606889-71606908 None:intergenic 50.0%
! TATGTTCTGGGTTCTCCAGC+CGG - chr4_2:71606925-71606944 Msa0620230:intron 50.0%
TCAAAGACAGGTTTACCGGC+TGG + chr4_2:71606943-71606962 None:intergenic 50.0%
GGCTTGTGATGGTTCTCTTC+CGG - chr4_2:71606972-71606991 Msa0620230:intron 50.0%
TCAAAGACAGGTTTACCCGC+TGG + chr4_2:71607031-71607050 None:intergenic 50.0%
GCCAACAACAGTCACCTATC+GGG - chr4_2:71607278-71607297 Msa0620230:intron 50.0%
TCGACAATCTAGCCCGTGCT+TGG - chr4_2:71600599-71600618 Msa0620230:three_prime_UTR 55.0%
AATCTAGCCCGTGCTTGGCA+CGG - chr4_2:71600604-71600623 Msa0620230:three_prime_UTR 55.0%
CGGTGACTGTGAGTGGAATG+AGG + chr4_2:71600663-71600682 None:intergenic 55.0%
GAACTGTCGGTGACTGTGAG+TGG + chr4_2:71600670-71600689 None:intergenic 55.0%
GTCGTGAAACAGGTTGCGGT+TGG - chr4_2:71600860-71600879 Msa0620230:three_prime_UTR 55.0%
CGGTTGGAAATGAACGGCGA+CGG - chr4_2:71600876-71600895 Msa0620230:three_prime_UTR 55.0%
TGACGATAGACCGGTCACTG+AGG - chr4_2:71601755-71601774 Msa0620230:intron 55.0%
ACCACCCACCCCTAATCAAG+TGG - chr4_2:71603606-71603625 Msa0620230:intron 55.0%
ACCACTTGATTAGGGGTGGG+TGG + chr4_2:71603610-71603629 None:intergenic 55.0%
TGACGAAGAGCCATCGATGG+CGG + chr4_2:71604032-71604051 None:intergenic 55.0%
GCTGCAGGTTAAAGCAACGG+CGG - chr4_2:71604127-71604146 Msa0620230:intron 55.0%
!!! GTGGTTTTGAGAGTGAGCCG+TGG - chr4_2:71604315-71604334 Msa0620230:intron 55.0%
TACCTTGGAGGGCTCTTCAC+AGG - chr4_2:71605539-71605558 Msa0620230:intron 55.0%
CTTGCTCTCCACCTCTCTCT+TGG + chr4_2:71605743-71605762 None:intergenic 55.0%
CAAGAGAGAGGTGGAGAGCA+AGG - chr4_2:71605741-71605760 Msa0620230:intron 55.0%
AGAGGCTGAAGGACGTAGTG+CGG - chr4_2:71606150-71606169 Msa0620230:intron 55.0%
!! GCTGTTATTGGGGGCATCCT+TGG - chr4_2:71606394-71606413 Msa0620230:intron 55.0%
!! TATTGGGGGCATCCTTGGAC+AGG - chr4_2:71606399-71606418 Msa0620230:intron 55.0%
GGTTCTGTCCCGAAAGAAGC+TGG - chr4_2:71606895-71606914 Msa0620230:CDS 55.0%
GATTCTCCAGCGGGTAAACC+TGG - chr4_2:71607110-71607129 Msa0620230:intron 55.0%
GCCCGATAGGTGACTGTTGT+TGG + chr4_2:71607282-71607301 None:intergenic 55.0%
ATCTAGCCCGTGCTTGGCAC+GGG - chr4_2:71600605-71600624 Msa0620230:three_prime_UTR 60.0%
GCGGAGGAGAAGGGAACTGT+CGG + chr4_2:71600683-71600702 None:intergenic 60.0%
AAATTCGTCTCAGGGCGCGG+AGG + chr4_2:71600699-71600718 None:intergenic 60.0%
CGGCGACGGCGAAGAGTTAA+CGG - chr4_2:71600890-71600909 Msa0620230:three_prime_UTR 60.0%
!! GGGGTGCCGATGCTCAAAGA+AGG - chr4_2:71600952-71600971 Msa0620230:three_prime_UTR 60.0%
CTCCTGTGAAGAGCCCTCCA+AGG + chr4_2:71605544-71605563 None:intergenic 60.0%
GAGGCTGAAGGACGTAGTGC+GGG - chr4_2:71606151-71606170 Msa0620230:intron 60.0%
TGGACACCCGTGCCAAGCAC+GGG + chr4_2:71600614-71600633 None:intergenic 65.0%
CTGGACACCCGTGCCAAGCA+CGG + chr4_2:71600615-71600634 None:intergenic 65.0%
TCTCAGGGCGCGGAGGAGAA+GGG + chr4_2:71600692-71600711 None:intergenic 65.0%
CGGCGAAGAGTTAACGGCGC+AGG - chr4_2:71600896-71600915 Msa0620230:three_prime_UTR 65.0%
GTCTCAGGGCGCGGAGGAGA+AGG + chr4_2:71600693-71600712 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71600590 71607497 71600590 ID=Msa0620230;Name=Msa0620230
chr4_2 mRNA 71600590 71607497 71600590 ID=Msa0620230-mRNA-1;Parent=Msa0620230;Name=Msa0620230-mRNA-1;_AED=0.12;_eAED=0.12;_QI=200|1|1|1|0.7|0.72|11|879|325
chr4_2 exon 71600590 71601585 71600590 ID=Msa0620230-mRNA-1:exon:21231;Parent=Msa0620230-mRNA-1
chr4_2 exon 71601667 71601771 71601667 ID=Msa0620230-mRNA-1:exon:21230;Parent=Msa0620230-mRNA-1
chr4_2 exon 71601850 71601953 71601850 ID=Msa0620230-mRNA-1:exon:21229;Parent=Msa0620230-mRNA-1
chr4_2 exon 71602495 71602561 71602495 ID=Msa0620230-mRNA-1:exon:21228;Parent=Msa0620230-mRNA-1
chr4_2 exon 71603283 71603333 71603283 ID=Msa0620230-mRNA-1:exon:21227;Parent=Msa0620230-mRNA-1
chr4_2 exon 71605753 71605869 71605753 ID=Msa0620230-mRNA-1:exon:21226;Parent=Msa0620230-mRNA-1
chr4_2 exon 71605960 71606039 71605960 ID=Msa0620230-mRNA-1:exon:21225;Parent=Msa0620230-mRNA-1
chr4_2 exon 71606184 71606379 71606184 ID=Msa0620230-mRNA-1:exon:21224;Parent=Msa0620230-mRNA-1
chr4_2 exon 71606882 71606933 71606882 ID=Msa0620230-mRNA-1:exon:21223;Parent=Msa0620230-mRNA-1
chr4_2 exon 71607114 71607215 71607114 ID=Msa0620230-mRNA-1:exon:21222;Parent=Msa0620230-mRNA-1
chr4_2 exon 71607311 71607497 71607311 ID=Msa0620230-mRNA-1:exon:21221;Parent=Msa0620230-mRNA-1
chr4_2 five_prime_UTR 71607311 71607497 71607311 ID=Msa0620230-mRNA-1:five_prime_utr;Parent=Msa0620230-mRNA-1
chr4_2 five_prime_UTR 71607203 71607215 71607203 ID=Msa0620230-mRNA-1:five_prime_utr;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71607114 71607202 71607114 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71606882 71606933 71606882 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71606184 71606379 71606184 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71605960 71606039 71605960 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71605753 71605869 71605753 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71603283 71603333 71603283 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71602495 71602561 71602495 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71601850 71601953 71601850 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71601667 71601771 71601667 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 CDS 71601469 71601585 71601469 ID=Msa0620230-mRNA-1:cds;Parent=Msa0620230-mRNA-1
chr4_2 three_prime_UTR 71600590 71601468 71600590 ID=Msa0620230-mRNA-1:three_prime_utr;Parent=Msa0620230-mRNA-1
Gene Sequence

>Msa0620230

ATGAACGGCGACGGCGAAGAGTTAACGGCGCAGGAAACCGCTTTGTATGACCGTCAGATTAGGGTTTGGGGTGCCGATGCTCAAAGAAGATTAAGCAAAGCTCATGTCTTAGTTTATGGAATGAAAGGAACTATTGCTGAGTTTTGCAAGAATATTGTTCTGGCTGGAGTTGGTAGTCTGACCTTAATTGACGATAGACCGGTCACTGAGGAATTGCTTTCTTCAAATTTTCTTATTCCTCCTGATGAGAATGTGTATAATGGAAAAACCATTGCTCAGCTTTGTTGTGATTCACTTAAAGACTTCAATCCTATGGTTCGTGTCTTTGTGGATAAAGGTGATTTGTCAAGCTTTGATGTAGAATTCTTCGGCAAATTCGATGTTGTTGTTGTCAGTTGTTGCTCACGTTCAGCCAAAAAACTAGCCAATGAAAAATGCCGGAAAGCTTCCAAACGTGTAGCATTTTATACTGTTGACTGTAGAGATTCTTGCGGTGAAGTTTTTGTTGATCTGCAGGACTATAAATATCAAAAGAAAAAAATGGAGGAAACTATTGAATGCCACCTAAAATATCCAAGTTTTGAGGATGCTCTATCAGTACCTTGGAGGGCTCTTCACAGGAGAATGTCAAAGCTGTACTTTGCAATGAGAGTAATAGAGAAGTTTGAAGAGGCTGAAGGACGTAGTGCGGGAGATGTTTCTGATGCAGATCTTTCCAATGTTCTTAAGCTGAAAAAGGAGCTTTGTACTGCACAGTCTCTCAATGAATCTCATGTGCCTGATACTCTTCTGGAAAGATTGGTAGCAGATACAACAGAATTTCCTCCAGTTTCTGCTGTTATTGGGGGCATCCTTGGACAGGAGGTTATCAAAGCAATTTCTGGGAAAGGGGATCCCATAAAAAACTTTTTCTATTTTGATGCTTCTGATGGGAAGGGTATCATAGAAGACATATCTGATTCAAATACTGGAAAGTGA

Protein sequence

>Msa0620230

MNGDGEELTAQETALYDRQIRVWGADAQRRLSKAHVLVYGMKGTIAEFCKNIVLAGVGSLTLIDDRPVTEELLSSNFLIPPDENVYNGKTIAQLCCDSLKDFNPMVRVFVDKGDLSSFDVEFFGKFDVVVVSCCSRSAKKLANEKCRKASKRVAFYTVDCRDSCGEVFVDLQDYKYQKKKMEETIECHLKYPSFEDALSVPWRALHRRMSKLYFAMRVIEKFEEAEGRSAGDVSDADLSNVLKLKKELCTAQSLNESHVPDTLLERLVADTTEFPPVSAVIGGILGQEVIKAISGKGDPIKNFFYFDASDGKGIIEDISDSNTGK*