Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055180 | XP_003588709.2 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.10e-89 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055180 | sp|Q9C944|H2AV3_ARATH | 88.060 | 134 | 16 | 0 | 1 | 134 | 1 | 134 | 5.18e-75 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055180 | G7I6D5 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 5.27e-90 | 266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001290 | Msa0055180 | -0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0002750 | Msa0055180 | 0.832658 | 8.334847e-56 | -8.615850e-47 |
| Msa0002790 | Msa0055180 | 0.822632 | 2.135238e-53 | -8.615850e-47 |
| Msa0003640 | Msa0055180 | 0.825956 | 3.532753e-54 | -8.615850e-47 |
| Msa0003780 | Msa0055180 | 0.836517 | 8.931867e-57 | -8.615850e-47 |
| Msa0004980 | Msa0055180 | 0.812059 | 5.128299e-51 | -8.615850e-47 |
| Msa0006380 | Msa0055180 | 0.829212 | 5.841198e-55 | -8.615850e-47 |
| Msa0006910 | Msa0055180 | 0.811808 | 5.816616e-51 | -8.615850e-47 |
| Msa0011960 | Msa0055180 | 0.817643 | 2.964990e-52 | -8.615850e-47 |
| Msa0012240 | Msa0055180 | 0.822913 | 1.836374e-53 | -8.615850e-47 |
| Msa0023000 | Msa0055180 | 0.839308 | 1.712772e-57 | -8.615850e-47 |
| Msa0023010 | Msa0055180 | 0.817686 | 2.899027e-52 | -8.615850e-47 |
| Msa0025730 | Msa0055180 | 0.850275 | 1.886562e-60 | -8.615850e-47 |
| Msa0027230 | Msa0055180 | 0.809974 | 1.451325e-50 | -8.615850e-47 |
| Msa0027260 | Msa0055180 | 0.895774 | 6.963656e-76 | -8.615850e-47 |
| Msa0032260 | Msa0055180 | 0.821828 | 3.281110e-53 | -8.615850e-47 |
| Msa0032580 | Msa0055180 | 0.855387 | 6.528578e-62 | -8.615850e-47 |
| Msa0033110 | Msa0055180 | 0.829381 | 5.313233e-55 | -8.615850e-47 |
| Msa0033260 | Msa0055180 | 0.826602 | 2.479559e-54 | -8.615850e-47 |
| Msa0040690 | Msa0055180 | 0.860387 | 2.140732e-63 | -8.615850e-47 |
| Msa0043660 | Msa0055180 | 0.818319 | 2.085516e-52 | -8.615850e-47 |
| Msa0044000 | Msa0055180 | 0.805293 | 1.431887e-49 | -8.615850e-47 |
| Msa0047160 | Msa0055180 | 0.841773 | 3.876192e-58 | -8.615850e-47 |
| Msa0048180 | Msa0055180 | 0.864106 | 1.543627e-64 | -8.615850e-47 |
| Msa0055180 | Msa0055190 | 0.872616 | 2.773500e-67 | -8.615850e-47 |
| Msa0055180 | Msa0056470 | 0.876091 | 1.839321e-68 | -8.615850e-47 |
| Msa0055180 | Msa0058300 | 0.851294 | 9.749021e-61 | -8.615850e-47 |
| Msa0055180 | Msa0059040 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa0055180 | Msa0059110 | 0.824548 | 7.606217e-54 | -8.615850e-47 |
| Msa0055180 | Msa0073480 | 0.811982 | 5.331756e-51 | -8.615850e-47 |
| Msa0055180 | Msa0074030 | 0.816071 | 6.678627e-52 | -8.615850e-47 |
| Msa0055180 | Msa0074320 | 0.818912 | 1.529965e-52 | -8.615850e-47 |
| Msa0055180 | Msa0075960 | 0.805302 | 1.425552e-49 | -8.615850e-47 |
| Msa0055180 | Msa0077530 | 0.814789 | 1.288033e-51 | -8.615850e-47 |
| Msa0055180 | Msa0080200 | 0.811224 | 7.790406e-51 | -8.615850e-47 |
| Msa0055180 | Msa0086750 | 0.844792 | 6.069903e-59 | -8.615850e-47 |
| Msa0055180 | Msa0090520 | 0.829457 | 5.093947e-55 | -8.615850e-47 |
| Msa0055180 | Msa0091410 | 0.831759 | 1.391143e-55 | -8.615850e-47 |
| Msa0055180 | Msa0094470 | 0.854575 | 1.123313e-61 | -8.615850e-47 |
| Msa0055180 | Msa0100730 | 0.808573 | 2.898792e-50 | -8.615850e-47 |
| Msa0055180 | Msa0100740 | 0.935593 | 6.647138e-97 | -8.615850e-47 |
| Msa0055180 | Msa0105620 | 0.816621 | 5.031030e-52 | -8.615850e-47 |
| Msa0055180 | Msa0109460 | 0.818213 | 2.204702e-52 | -8.615850e-47 |
| Msa0055180 | Msa0114870 | 0.817411 | 3.343231e-52 | -8.615850e-47 |
| Msa0055180 | Msa0116670 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0055180 | Msa0118780 | 0.843196 | 1.625457e-58 | -8.615850e-47 |
| Msa0055180 | Msa0122970 | 0.810677 | 1.023472e-50 | -8.615850e-47 |
| Msa0055180 | Msa0127310 | 0.819468 | 1.143386e-52 | -8.615850e-47 |
| Msa0055180 | Msa0128860 | 0.878350 | 3.015516e-69 | -8.615850e-47 |
| Msa0055180 | Msa0129190 | -0.808403 | 3.151409e-50 | -8.615850e-47 |
| Msa0055180 | Msa0133540 | 0.801034 | 1.089451e-48 | -8.615850e-47 |
| Msa0055180 | Msa0137550 | 0.810175 | 1.313464e-50 | -8.615850e-47 |
| Msa0055180 | Msa0137990 | 0.829408 | 5.235850e-55 | -8.615850e-47 |
| Msa0055180 | Msa0138630 | 0.838062 | 3.594678e-57 | -8.615850e-47 |
| Msa0055180 | Msa0140650 | 0.816248 | 6.098280e-52 | -8.615850e-47 |
| Msa0055180 | Msa0140820 | 0.879221 | 1.486798e-69 | -8.615850e-47 |
| Msa0055180 | Msa0145730 | 0.850947 | 1.220924e-60 | -8.615850e-47 |
| Msa0055180 | Msa0146340 | 0.829405 | 5.242602e-55 | -8.615850e-47 |
| Msa0055180 | Msa0148060 | 0.813896 | 2.028965e-51 | -8.615850e-47 |
| Msa0055180 | Msa0150300 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0055180 | Msa0150820 | 0.813710 | 2.230646e-51 | -8.615850e-47 |
| Msa0055180 | Msa0156370 | 0.806567 | 7.727623e-50 | -8.615850e-47 |
| Msa0055180 | Msa0159170 | 0.846662 | 1.887285e-59 | -8.615850e-47 |
| Msa0055180 | Msa0159340 | 0.806282 | 8.874245e-50 | -8.615850e-47 |
| Msa0055180 | Msa0160550 | 0.804485 | 2.111702e-49 | -8.615850e-47 |
| Msa0055180 | Msa0162130 | 0.838949 | 2.122219e-57 | -8.615850e-47 |
| Msa0055180 | Msa0165660 | 0.806812 | 6.859546e-50 | -8.615850e-47 |
| Msa0055180 | Msa0165950 | 0.808543 | 2.941823e-50 | -8.615850e-47 |
| Msa0055180 | Msa0167480 | 0.821893 | 3.169630e-53 | -8.615850e-47 |
| Msa0055180 | Msa0168500 | 0.801356 | 9.358179e-49 | -8.615850e-47 |
| Msa0055180 | Msa0169310 | 0.800773 | 1.231413e-48 | -8.615850e-47 |
| Msa0055180 | Msa0172970 | 0.856812 | 2.498360e-62 | -8.615850e-47 |
| Msa0055180 | Msa0173530 | 0.801094 | 1.058885e-48 | -8.615850e-47 |
| Msa0055180 | Msa0174730 | 0.878723 | 2.229180e-69 | -8.615850e-47 |
| Msa0055180 | Msa0183900 | 0.824483 | 7.876621e-54 | -8.615850e-47 |
| Msa0055180 | Msa0187690 | 0.823567 | 1.292106e-53 | -8.615850e-47 |
| Msa0055180 | Msa0187930 | 0.851849 | 6.789688e-61 | -8.615850e-47 |
| Msa0055180 | Msa0188350 | 0.846710 | 1.830727e-59 | -8.615850e-47 |
| Msa0055180 | Msa0189300 | 0.836075 | 1.156924e-56 | -8.615850e-47 |
| Msa0055180 | Msa0189520 | 0.811455 | 6.940686e-51 | -8.615850e-47 |
| Msa0055180 | Msa0189700 | 0.806741 | 7.098228e-50 | -8.615850e-47 |
| Msa0055180 | Msa0193120 | 0.816309 | 5.909547e-52 | -8.615850e-47 |
| Msa0055180 | Msa0194540 | 0.851245 | 1.006341e-60 | -8.615850e-47 |
| Msa0055180 | Msa0199690 | 0.816934 | 4.279939e-52 | -8.615850e-47 |
| Msa0055180 | Msa0199880 | 0.863806 | 1.913059e-64 | -8.615850e-47 |
| Msa0055180 | Msa0220720 | 0.858982 | 5.666806e-63 | -8.615850e-47 |
| Msa0055180 | Msa0231100 | 0.842031 | 3.313444e-58 | -8.615850e-47 |
| Msa0055180 | Msa0231660 | 0.818289 | 2.118672e-52 | -8.615850e-47 |
| Msa0055180 | Msa0231980 | 0.821832 | 3.274403e-53 | -8.615850e-47 |
| Msa0055180 | Msa0232010 | 0.819171 | 1.336042e-52 | -8.615850e-47 |
| Msa0055180 | Msa0232050 | 0.829270 | 5.653990e-55 | -8.615850e-47 |
| Msa0055180 | Msa0232080 | 0.823044 | 1.712096e-53 | -8.615850e-47 |
| Msa0055180 | Msa0233630 | -0.815094 | 1.102353e-51 | -8.615850e-47 |
| Msa0055180 | Msa0242410 | 0.835738 | 1.409015e-56 | -8.615850e-47 |
| Msa0055180 | Msa0244780 | 0.847203 | 1.341370e-59 | -8.615850e-47 |
| Msa0055180 | Msa0262050 | 0.825040 | 5.820652e-54 | -8.615850e-47 |
| Msa0055180 | Msa0262310 | 0.877948 | 4.169463e-69 | -8.615850e-47 |
| Msa0055180 | Msa0262480 | 0.809313 | 2.012513e-50 | -8.615850e-47 |
| Msa0055180 | Msa0265430 | 0.851698 | 7.491543e-61 | -8.615850e-47 |
| Msa0055180 | Msa0268130 | 0.853081 | 3.025400e-61 | -8.615850e-47 |
| Msa0055180 | Msa0280430 | 0.813224 | 2.852470e-51 | -8.615850e-47 |
| Msa0055180 | Msa0280610 | 0.858112 | 1.029779e-62 | -8.615850e-47 |
| Msa0055180 | Msa0281530 | 0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0055180 | Msa0289610 | 0.803030 | 4.234784e-49 | -8.615850e-47 |
| Msa0055180 | Msa0298990 | 0.849517 | 3.073712e-60 | -8.615850e-47 |
| Msa0055180 | Msa0299870 | 0.850097 | 2.115956e-60 | -8.615850e-47 |
| Msa0055180 | Msa0300350 | 0.814335 | 1.623851e-51 | -8.615850e-47 |
| Msa0055180 | Msa0304590 | 0.807139 | 5.847595e-50 | -8.615850e-47 |
| Msa0055180 | Msa0309750 | 0.823996 | 1.024919e-53 | -8.615850e-47 |
| Msa0055180 | Msa0310030 | 0.836068 | 1.162120e-56 | -8.615850e-47 |
| Msa0055180 | Msa0317910 | 0.843608 | 1.262207e-58 | -8.615850e-47 |
| Msa0055180 | Msa0326480 | 0.812427 | 4.263986e-51 | -8.615850e-47 |
| Msa0055180 | Msa0327330 | 0.815238 | 1.024306e-51 | -8.615850e-47 |
| Msa0055180 | Msa0336010 | 0.838807 | 2.308872e-57 | -8.615850e-47 |
| Msa0055180 | Msa0337240 | 0.859029 | 5.484982e-63 | -8.615850e-47 |
| Msa0055180 | Msa0337650 | 0.871486 | 6.587668e-67 | -8.615850e-47 |
| Msa0055180 | Msa0340380 | 0.855934 | 4.521632e-62 | -8.615850e-47 |
| Msa0055180 | Msa0345350 | 0.838661 | 2.518926e-57 | -8.615850e-47 |
| Msa0055180 | Msa0345390 | 0.817756 | 2.795299e-52 | -8.615850e-47 |
| Msa0055180 | Msa0348830 | 0.839669 | 1.380252e-57 | -8.615850e-47 |
| Msa0055180 | Msa0351990 | 0.839960 | 1.158738e-57 | -8.615850e-47 |
| Msa0055180 | Msa0357900 | 0.824670 | 7.118616e-54 | -8.615850e-47 |
| Msa0055180 | Msa0366890 | 0.867795 | 1.051682e-65 | -8.615850e-47 |
| Msa0055180 | Msa0369050 | 0.814493 | 1.497816e-51 | -8.615850e-47 |
| Msa0055180 | Msa0369220 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
| Msa0055180 | Msa0369450 | 0.847031 | 1.495490e-59 | -8.615850e-47 |
| Msa0055180 | Msa0375310 | 0.833654 | 4.709477e-56 | -8.615850e-47 |
| Msa0055180 | Msa0376300 | 0.805099 | 1.571941e-49 | -8.615850e-47 |
| Msa0055180 | Msa0376310 | 0.809876 | 1.523344e-50 | -8.615850e-47 |
| Msa0055180 | Msa0380300 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
| Msa0055180 | Msa0385580 | 0.878373 | 2.960824e-69 | -8.615850e-47 |
| Msa0055180 | Msa0388700 | 0.829753 | 4.314110e-55 | -8.615850e-47 |
| Msa0055180 | Msa0390030 | 0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0055180 | Msa0393370 | 0.817161 | 3.806802e-52 | -8.615850e-47 |
| Msa0055180 | Msa0395820 | 0.837918 | 3.914806e-57 | -8.615850e-47 |
| Msa0055180 | Msa0395890 | 0.825107 | 5.614793e-54 | -8.615850e-47 |
| Msa0055180 | Msa0397540 | 0.803483 | 3.412670e-49 | -8.615850e-47 |
| Msa0055180 | Msa0402790 | 0.830015 | 3.725539e-55 | -8.615850e-47 |
| Msa0055180 | Msa0414800 | 0.851074 | 1.124347e-60 | -8.615850e-47 |
| Msa0055180 | Msa0421500 | 0.842479 | 2.521344e-58 | -8.615850e-47 |
| Msa0055180 | Msa0427150 | 0.837928 | 3.891007e-57 | -8.615850e-47 |
| Msa0055180 | Msa0443390 | 0.859423 | 4.178645e-63 | -8.615850e-47 |
| Msa0055180 | Msa0458060 | 0.823344 | 1.457334e-53 | -8.615850e-47 |
| Msa0055180 | Msa0467380 | 0.837158 | 6.131459e-57 | -8.615850e-47 |
| Msa0055180 | Msa0468330 | 0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0055180 | Msa0471440 | 0.831573 | 1.546546e-55 | -8.615850e-47 |
| Msa0055180 | Msa0471590 | 0.838844 | 2.259192e-57 | -8.615850e-47 |
| Msa0055180 | Msa0493410 | 0.850626 | 1.503942e-60 | -8.615850e-47 |
| Msa0055180 | Msa0497210 | 0.846675 | 1.871484e-59 | -8.615850e-47 |
| Msa0055180 | Msa0497490 | 0.810110 | 1.356458e-50 | -8.615850e-47 |
| Msa0055180 | Msa0508590 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
| Msa0055180 | Msa0508630 | 0.824289 | 8.747917e-54 | -8.615850e-47 |
| Msa0055180 | Msa0508870 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
| Msa0055180 | Msa0509950 | -0.807196 | 5.688198e-50 | -8.615850e-47 |
| Msa0055180 | Msa0510350 | 0.818817 | 1.608026e-52 | -8.615850e-47 |
| Msa0055180 | Msa0513990 | 0.831402 | 1.703916e-55 | -8.615850e-47 |
| Msa0055180 | Msa0521050 | 0.847689 | 9.864283e-60 | -8.615850e-47 |
| Msa0055180 | Msa0526540 | 0.875054 | 4.167170e-68 | -8.615850e-47 |
| Msa0055180 | Msa0527020 | 0.802973 | 4.350581e-49 | -8.615850e-47 |
| Msa0055180 | Msa0527150 | 0.818934 | 1.512246e-52 | -8.615850e-47 |
| Msa0055180 | Msa0529680 | 0.818211 | 2.206685e-52 | -8.615850e-47 |
| Msa0055180 | Msa0534900 | 0.828289 | 9.763787e-55 | -8.615850e-47 |
| Msa0055180 | Msa0541360 | 0.810888 | 9.212357e-51 | -8.615850e-47 |
| Msa0055180 | Msa0541410 | 0.801496 | 8.759648e-49 | -8.615850e-47 |
| Msa0055180 | Msa0544180 | 0.801406 | 9.139838e-49 | -8.615850e-47 |
| Msa0055180 | Msa0548240 | 0.836203 | 1.074056e-56 | -8.615850e-47 |
| Msa0055180 | Msa0550120 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
| Msa0055180 | Msa0555450 | 0.803358 | 3.620790e-49 | -8.615850e-47 |
| Msa0055180 | Msa0556060 | 0.844709 | 6.391237e-59 | -8.615850e-47 |
| Msa0055180 | Msa0557480 | 0.807869 | 4.095021e-50 | -8.615850e-47 |
| Msa0055180 | Msa0571920 | 0.836622 | 8.400720e-57 | -8.615850e-47 |
| Msa0055180 | Msa0576940 | 0.867826 | 1.027485e-65 | -8.615850e-47 |
| Msa0055180 | Msa0581110 | 0.861189 | 1.221874e-63 | -8.615850e-47 |
| Msa0055180 | Msa0581280 | 0.806115 | 9.622982e-50 | -8.615850e-47 |
| Msa0055180 | Msa0585510 | 0.805500 | 1.295669e-49 | -8.615850e-47 |
| Msa0055180 | Msa0588260 | 0.830423 | 2.961728e-55 | -8.615850e-47 |
| Msa0055180 | Msa0588360 | 0.853937 | 1.717216e-61 | -8.615850e-47 |
| Msa0055180 | Msa0605650 | 0.800045 | 1.732211e-48 | -8.615850e-47 |
| Msa0055180 | Msa0608320 | 0.838220 | 3.272466e-57 | -8.615850e-47 |
| Msa0055180 | Msa0608500 | 0.809227 | 2.099624e-50 | -8.615850e-47 |
| Msa0055180 | Msa0610390 | 0.812391 | 4.340212e-51 | -8.615850e-47 |
| Msa0055180 | Msa0610430 | 0.800798 | 1.217110e-48 | -8.615850e-47 |
| Msa0055180 | Msa0615440 | 0.840647 | 7.665271e-58 | -8.615850e-47 |
| Msa0055180 | Msa0615580 | 0.836792 | 7.602728e-57 | -8.615850e-47 |
| Msa0055180 | Msa0615710 | 0.805381 | 1.372011e-49 | -8.615850e-47 |
| Msa0055180 | Msa0620890 | 0.951165 | 3.629865e-109 | -8.615850e-47 |
| Msa0055180 | Msa0621640 | 0.813016 | 3.168904e-51 | -8.615850e-47 |
| Msa0055180 | Msa0623790 | 0.837129 | 6.234544e-57 | -8.615850e-47 |
| Msa0055180 | Msa0625680 | 0.846220 | 2.491054e-59 | -8.615850e-47 |
| Msa0055180 | Msa0631350 | 0.813640 | 2.310161e-51 | -8.615850e-47 |
| Msa0055180 | Msa0643560 | 0.833732 | 4.504328e-56 | -8.615850e-47 |
| Msa0055180 | Msa0646580 | 0.800335 | 1.512871e-48 | -8.615850e-47 |
| Msa0055180 | Msa0647500 | 0.822492 | 2.301526e-53 | -8.615850e-47 |
| Msa0055180 | Msa0650920 | 0.823044 | 1.711450e-53 | -8.615850e-47 |
| Msa0055180 | Msa0660490 | 0.807366 | 5.235200e-50 | -8.615850e-47 |
| Msa0055180 | Msa0661300 | 0.881307 | 2.677122e-70 | -8.615850e-47 |
| Msa0055180 | Msa0666230 | 0.841053 | 6.000215e-58 | -8.615850e-47 |
| Msa0055180 | Msa0666560 | -0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0055180 | Msa0675410 | 0.822643 | 2.122368e-53 | -8.615850e-47 |
| Msa0055180 | Msa0677290 | 0.830302 | 3.170275e-55 | -8.615850e-47 |
| Msa0055180 | Msa0686210 | 0.807726 | 4.390266e-50 | -8.615850e-47 |
| Msa0055180 | Msa0688960 | 0.802890 | 4.526566e-49 | -8.615850e-47 |
| Msa0055180 | Msa0689260 | 0.835061 | 2.089134e-56 | -8.615850e-47 |
| Msa0055180 | Msa0691900 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
| Msa0055180 | Msa0692830 | 0.813143 | 2.971516e-51 | -8.615850e-47 |
| Msa0055180 | Msa0692840 | 0.809653 | 1.701122e-50 | -8.615850e-47 |
| Msa0055180 | Msa0692940 | 0.838529 | 2.724661e-57 | -8.615850e-47 |
| Msa0055180 | Msa0692950 | 0.807608 | 4.652595e-50 | -8.615850e-47 |
| Msa0055180 | Msa0698490 | 0.845733 | 3.378291e-59 | -8.615850e-47 |
| Msa0055180 | Msa0698660 | 0.844276 | 8.358733e-59 | -8.615850e-47 |
| Msa0055180 | Msa0698780 | 0.858924 | 5.895901e-63 | -8.615850e-47 |
| Msa0055180 | Msa0709500 | 0.835480 | 1.637088e-56 | -8.615850e-47 |
| Msa0055180 | Msa0711780 | 0.815818 | 7.606466e-52 | -8.615850e-47 |
| Msa0055180 | Msa0715700 | 0.815561 | 8.680849e-52 | -8.615850e-47 |
| Msa0055180 | Msa0717230 | -0.816498 | 5.360503e-52 | -8.615850e-47 |
| Msa0055180 | Msa0718740 | 0.809218 | 2.109534e-50 | -8.615850e-47 |
| Msa0055180 | Msa0719420 | 0.836498 | 9.032543e-57 | -8.615850e-47 |
| Msa0055180 | Msa0722020 | 0.821911 | 3.139541e-53 | -8.615850e-47 |
| Msa0055180 | Msa0750880 | 0.818289 | 2.118169e-52 | -8.615850e-47 |
| Msa0055180 | Msa0753140 | 0.813537 | 2.434900e-51 | -8.615850e-47 |
| Msa0055180 | Msa0763020 | 0.807436 | 5.060569e-50 | -8.615850e-47 |
| Msa0055180 | Msa0763070 | 0.807361 | 5.247559e-50 | -8.615850e-47 |
| Msa0055180 | Msa0764680 | -0.838621 | 2.579726e-57 | -8.615850e-47 |
| Msa0055180 | Msa0772480 | 0.816268 | 6.036948e-52 | -8.615850e-47 |
| Msa0055180 | Msa0784860 | 0.803858 | 2.852525e-49 | -8.615850e-47 |
| Msa0055180 | Msa0786270 | 0.800003 | 1.766753e-48 | -8.615850e-47 |
| Msa0055180 | Msa0788850 | 0.842651 | 2.270786e-58 | -8.615850e-47 |
| Msa0055180 | Msa0789680 | 0.838447 | 2.860819e-57 | -8.615850e-47 |
| Msa0055180 | Msa0790660 | -0.802489 | 5.474802e-49 | -8.615850e-47 |
| Msa0055180 | Msa0790850 | 0.834620 | 2.697406e-56 | -8.615850e-47 |
| Msa0055180 | Msa0790990 | 0.801625 | 8.242908e-49 | -8.615850e-47 |
| Msa0055180 | Msa0794670 | 0.822369 | 2.457887e-53 | -8.615850e-47 |
| Msa0055180 | Msa0798440 | 0.831037 | 2.094027e-55 | -8.615850e-47 |
| Msa0055180 | Msa0799680 | -0.808769 | 2.631717e-50 | -8.615850e-47 |
| Msa0055180 | Msa0800370 | 0.815303 | 9.905435e-52 | -8.615850e-47 |
| Msa0055180 | Msa0801110 | 0.821339 | 4.255973e-53 | -8.615850e-47 |
| Msa0055180 | Msa0802410 | 0.844458 | 7.466328e-59 | -8.615850e-47 |
| Msa0055180 | Msa0806880 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
| Msa0055180 | Msa0808080 | 0.808254 | 3.389110e-50 | -8.615850e-47 |
| Msa0055180 | Msa0808270 | 0.816471 | 5.436992e-52 | -8.615850e-47 |
| Msa0055180 | Msa0813720 | 0.833145 | 6.309747e-56 | -8.615850e-47 |
| Msa0055180 | Msa0813740 | 0.814689 | 1.355598e-51 | -8.615850e-47 |
| Msa0055180 | Msa0816730 | 0.801526 | 8.637897e-49 | -8.615850e-47 |
| Msa0055180 | Msa0830090 | 0.804702 | 1.902619e-49 | -8.615850e-47 |
| Msa0055180 | Msa0830540 | 0.826996 | 1.996281e-54 | -8.615850e-47 |
| Msa0055180 | Msa0835420 | 0.819446 | 1.156825e-52 | -8.615850e-47 |
| Msa0055180 | Msa0842830 | 0.804740 | 1.868211e-49 | -8.615850e-47 |
| Msa0055180 | Msa0844220 | -0.812740 | 3.641129e-51 | -8.615850e-47 |
| Msa0055180 | Msa0849030 | 0.801684 | 8.016995e-49 | -8.615850e-47 |
| Msa0055180 | Msa0881270 | 0.847380 | 1.199412e-59 | -8.615850e-47 |
| Msa0055180 | Msa0881290 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
| Msa0055180 | Msa0887250 | 0.819859 | 9.307513e-53 | -8.615850e-47 |
| Msa0055180 | Msa0902760 | 0.834160 | 3.519595e-56 | -8.615850e-47 |
| Msa0055180 | Msa0953310 | 0.872674 | 2.652566e-67 | -8.615850e-47 |
| Msa0055180 | Msa0968590 | 0.841036 | 6.059916e-58 | -8.615850e-47 |
| Msa0055180 | Msa0974810 | 0.811922 | 5.492912e-51 | -8.615850e-47 |
| Msa0055180 | Msa0989540 | 0.844443 | 7.534316e-59 | -8.615850e-47 |
| Msa0055180 | Msa0999970 | 0.802660 | 5.048171e-49 | -8.615850e-47 |
| Msa0055180 | Msa1006840 | 0.865938 | 4.105210e-65 | -8.615850e-47 |
| Msa0055180 | Msa1008720 | 0.843800 | 1.121518e-58 | -8.615850e-47 |
| Msa0055180 | Msa1013400 | 0.836390 | 9.622496e-57 | -8.615850e-47 |
| Msa0055180 | Msa1019240 | 0.869787 | 2.382526e-66 | -8.615850e-47 |
| Msa0055180 | Msa1019260 | 0.883412 | 4.586318e-71 | -8.615850e-47 |
| Msa0055180 | Msa1030620 | 0.866431 | 2.865325e-65 | -8.615850e-47 |
| Msa0055180 | Msa1037420 | 0.838573 | 2.654194e-57 | -8.615850e-47 |
| Msa0055180 | Msa1043690 | 0.833893 | 4.105604e-56 | -8.615850e-47 |
| Msa0055180 | Msa1046020 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
| Msa0055180 | Msa1051200 | 0.833571 | 4.939725e-56 | -8.615850e-47 |
| Msa0055180 | Msa1051880 | 0.811110 | 8.245767e-51 | -8.615850e-47 |
| Msa0055180 | Msa1066490 | 0.830534 | 2.781987e-55 | -8.615850e-47 |
| Msa0055180 | Msa1072710 | 0.826672 | 2.385320e-54 | -8.615850e-47 |
| Msa0055180 | Msa1077030 | 0.832623 | 8.506251e-56 | -8.615850e-47 |
| Msa0055180 | Msa1080290 | 0.827841 | 1.251912e-54 | -8.615850e-47 |
| Msa0055180 | Msa1081150 | 0.845467 | 3.988453e-59 | -8.615850e-47 |
| Msa0055180 | Msa1081930 | 0.871576 | 6.153157e-67 | -8.615850e-47 |
| Msa0055180 | Msa1084470 | 0.854283 | 1.364629e-61 | -8.615850e-47 |
| Msa0055180 | Msa1091100 | 0.802051 | 6.738954e-49 | -8.615850e-47 |
| Msa0055180 | Msa1093530 | 0.834905 | 2.286461e-56 | -8.615850e-47 |
| Msa0055180 | Msa1104140 | 0.879867 | 8.776064e-70 | -8.615850e-47 |
| Msa0055180 | Msa1104210 | 0.888485 | 5.662037e-73 | -8.615850e-47 |
| Msa0055180 | Msa1106700 | 0.807838 | 4.155916e-50 | -8.615850e-47 |
| Msa0055180 | Msa1115080 | 0.822572 | 2.204727e-53 | -8.615850e-47 |
| Msa0055180 | Msa1122310 | -0.802183 | 6.329852e-49 | -8.615850e-47 |
| Msa0055180 | Msa1123810 | 0.821680 | 3.550216e-53 | -8.615850e-47 |
| Msa0055180 | Msa1126510 | 0.856020 | 4.266612e-62 | -8.615850e-47 |
| Msa0055180 | Msa1126770 | 0.807902 | 4.027982e-50 | -8.615850e-47 |
| Msa0055180 | Msa1126830 | 0.860742 | 1.670847e-63 | -8.615850e-47 |
| Msa0055180 | Msa1133250 | 0.802620 | 5.144710e-49 | -8.615850e-47 |
| Msa0055180 | Msa1137700 | 0.825307 | 5.035246e-54 | -8.615850e-47 |
| Msa0055180 | Msa1138870 | 0.820935 | 5.271963e-53 | -8.615850e-47 |
| Msa0055180 | Msa1138880 | 0.826927 | 2.073879e-54 | -8.615850e-47 |
| Msa0055180 | Msa1148910 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa0055180 | Msa1160590 | 0.831098 | 2.023807e-55 | -8.615850e-47 |
| Msa0055180 | Msa1165780 | 0.846878 | 1.647092e-59 | -8.615850e-47 |
| Msa0055180 | Msa1165940 | 0.860297 | 2.278310e-63 | -8.615850e-47 |
| Msa0055180 | Msa1166860 | 0.863507 | 2.369423e-64 | -8.615850e-47 |
| Msa0055180 | Msa1166870 | 0.849592 | 2.929727e-60 | -8.615850e-47 |
| Msa0055180 | Msa1171360 | 0.834721 | 2.544535e-56 | -8.615850e-47 |
| Msa0055180 | Msa1181250 | 0.811554 | 6.606843e-51 | -8.615850e-47 |
| Msa0055180 | Msa1181330 | 0.801438 | 9.003638e-49 | -8.615850e-47 |
| Msa0055180 | Msa1181850 | 0.835632 | 1.498677e-56 | -8.615850e-47 |
| Msa0055180 | Msa1181860 | 0.816458 | 5.473047e-52 | -8.615850e-47 |
| Msa0055180 | Msa1207270 | 0.829924 | 3.919884e-55 | -8.615850e-47 |
| Msa0055180 | Msa1209200 | 0.815191 | 1.048892e-51 | -8.615850e-47 |
| Msa0055180 | Msa1215820 | 0.819599 | 1.067333e-52 | -8.615850e-47 |
| Msa0055180 | Msa1218600 | 0.827767 | 1.304477e-54 | -8.615850e-47 |
| Msa0055180 | Msa1225700 | 0.819403 | 1.183125e-52 | -8.615850e-47 |
| Msa0055180 | Msa1230580 | 0.807109 | 5.933624e-50 | -8.615850e-47 |
| Msa0055180 | Msa1237940 | 0.836276 | 1.028786e-56 | -8.615850e-47 |
| Msa0055180 | Msa1243740 | -0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0055180 | Msa1251160 | 0.810197 | 1.299131e-50 | -8.615850e-47 |
| Msa0055180 | Msa1253800 | 0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0055180 | Msa1254730 | 0.841189 | 5.525308e-58 | -8.615850e-47 |
| Msa0055180 | Msa1257510 | 0.849485 | 3.138245e-60 | -8.615850e-47 |
| Msa0055180 | Msa1261680 | -0.812754 | 3.615792e-51 | -8.615850e-47 |
| Msa0055180 | Msa1262890 | 0.804706 | 1.899167e-49 | -8.615850e-47 |
| Msa0055180 | Msa1265630 | 0.842597 | 2.346329e-58 | -8.615850e-47 |
| Msa0055180 | Msa1294820 | 0.801569 | 8.466047e-49 | -8.615850e-47 |
| Msa0055180 | Msa1296830 | 0.811977 | 5.344615e-51 | -8.615850e-47 |
| Msa0055180 | Msa1331710 | 0.801133 | 1.039840e-48 | -8.615850e-47 |
| Msa0055180 | Msa1332590 | 0.816777 | 4.643031e-52 | -8.615850e-47 |
| Msa0055180 | Msa1336560 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
| Msa0055180 | Msa1343260 | 0.807629 | 4.603520e-50 | -8.615850e-47 |
| Msa0055180 | Msa1343290 | 0.832909 | 7.221970e-56 | -8.615850e-47 |
| Msa0055180 | Msa1349570 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0055180 | Msa1351540 | 0.804486 | 2.111025e-49 | -8.615850e-47 |
| Msa0055180 | Msa1353060 | 0.811259 | 7.656002e-51 | -8.615850e-47 |
| Msa0055180 | Msa1355970 | 0.800193 | 1.616225e-48 | -8.615850e-47 |
| Msa0055180 | Msa1358250 | 0.835643 | 1.489258e-56 | -8.615850e-47 |
| Msa0055180 | Msa1360140 | 0.820760 | 5.786380e-53 | -8.615850e-47 |
| Msa0055180 | Msa1361520 | 0.821932 | 3.104103e-53 | -8.615850e-47 |
| Msa0055180 | Msa1363330 | 0.879583 | 1.106631e-69 | -8.615850e-47 |
| Msa0055180 | Msa1366180 | 0.804932 | 1.703995e-49 | -8.615850e-47 |
| Msa0055180 | Msa1368120 | 0.824347 | 8.477831e-54 | -8.615850e-47 |
| Msa0055180 | Msa1369190 | 0.801523 | 8.648172e-49 | -8.615850e-47 |
| Msa0055180 | Msa1374120 | 0.845149 | 4.863737e-59 | -8.615850e-47 |
| Msa0055180 | Msa1379760 | 0.877908 | 4.306570e-69 | -8.615850e-47 |
| Msa0055180 | Msa1382620 | 0.831132 | 1.985017e-55 | -8.615850e-47 |
| Msa0055180 | Msa1385770 | 0.855499 | 6.056783e-62 | -8.615850e-47 |
| Msa0055180 | Msa1386600 | 0.879580 | 1.110054e-69 | -8.615850e-47 |
| Msa0055180 | Msa1386780 | 0.829511 | 4.941298e-55 | -8.615850e-47 |
| Msa0055180 | Msa1387200 | 0.814911 | 1.210449e-51 | -8.615850e-47 |
| Msa0055180 | Msa1392780 | 0.824979 | 6.017258e-54 | -8.615850e-47 |
| Msa0055180 | Msa1394290 | 0.857838 | 1.242454e-62 | -8.615850e-47 |
| Msa0055180 | Msa1399530 | 0.807186 | 5.716218e-50 | -8.615850e-47 |
| Msa0055180 | Msa1403420 | 0.812543 | 4.020474e-51 | -8.615850e-47 |
| Msa0055180 | Msa1407460 | 0.819270 | 1.268576e-52 | -8.615850e-47 |
| Msa0055180 | Msa1409240 | 0.852024 | 6.054849e-61 | -8.615850e-47 |
| Msa0055180 | Msa1413500 | 0.827020 | 1.970147e-54 | -8.615850e-47 |
| Msa0055180 | Msa1419870 | 0.834217 | 3.404470e-56 | -8.615850e-47 |
| Msa0055180 | Msa1420990 | 0.806139 | 9.508306e-50 | -8.615850e-47 |
| Msa0055180 | Msa1428880 | 0.802834 | 4.648346e-49 | -8.615850e-47 |
| Msa0055180 | Msa1431560 | -0.816085 | 6.631211e-52 | -8.615850e-47 |
| Msa0055180 | Msa1432420 | 0.815292 | 9.961763e-52 | -8.615850e-47 |
| Msa0055180 | Msa1432700 | 0.828672 | 7.894942e-55 | -8.615850e-47 |
| Msa0055180 | Msa1434140 | 0.836671 | 8.162048e-57 | -8.615850e-47 |
| Msa0055180 | Msa1436520 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
| Msa0055180 | Msa1444310 | 0.837713 | 4.419922e-57 | -8.615850e-47 |
| Msa0055180 | Msa1448690 | 0.846154 | 2.595502e-59 | -8.615850e-47 |
| Msa0055180 | Msa1450280 | 0.838919 | 2.160390e-57 | -8.615850e-47 |
| Msa0055180 | Msa1451160 | 0.816026 | 6.837752e-52 | -8.615850e-47 |
| Msa0055180 | Msa1454480 | 0.807438 | 5.054414e-50 | -8.615850e-47 |
| Msa0055180 | Msa1456050 | 0.833917 | 4.049394e-56 | -8.615850e-47 |
| Msa0055180 | Msa1457920 | 0.860277 | 2.311307e-63 | -8.615850e-47 |
| Msa0055180 | Msa1465260 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055180 | MtrunA17_Chr1g0148961 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.02e-93 | 266 |
| Msa0055180 | MtrunA17_Chr1g0148951 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.02e-93 | 266 |
| Msa0055180 | MtrunA17_Chr1g0184901 | 86.567 | 134 | 18 | 0 | 1 | 134 | 1 | 134 | 1.96e-73 | 215 |
| Msa0055180 | MtrunA17_Chr1g0211651 | 81.250 | 128 | 24 | 0 | 7 | 134 | 4 | 131 | 2.88e-71 | 209 |
| Msa0055180 | MtrunA17_Chr4g0024701 | 66.418 | 134 | 25 | 1 | 1 | 134 | 1 | 114 | 6.90e-47 | 147 |
| Msa0055180 | MtrunA17_Chr2g0319191 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 1.42e-40 | 132 |
| Msa0055180 | MtrunA17_Chr2g0319181 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 1.91e-40 | 131 |
| Msa0055180 | MtrunA17_Chr7g0268831 | 58.333 | 132 | 47 | 4 | 1 | 130 | 1 | 126 | 2.47e-40 | 131 |
| Msa0055180 | MtrunA17_Chr7g0273351 | 58.197 | 122 | 49 | 2 | 10 | 130 | 3 | 123 | 8.09e-40 | 130 |
| Msa0055180 | MtrunA17_Chr7g0273331 | 58.197 | 122 | 49 | 2 | 10 | 130 | 59 | 179 | 9.14e-39 | 129 |
| Msa0055180 | MtrunA17_Chr7g0259151 | 61.682 | 107 | 39 | 2 | 25 | 130 | 21 | 126 | 2.97e-38 | 126 |
| Msa0055180 | MtrunA17_Chr7g0272611 | 55.652 | 115 | 49 | 2 | 19 | 132 | 19 | 132 | 7.29e-37 | 123 |
| Msa0055180 | MtrunA17_Chr4g0031041 | 59.292 | 113 | 44 | 2 | 23 | 134 | 15 | 126 | 4.29e-36 | 121 |
| Msa0055180 | MtrunA17_Chr2g0327951 | 59.292 | 113 | 44 | 2 | 23 | 134 | 56 | 167 | 8.62e-36 | 121 |
| Msa0055180 | MtrunA17_Chr4g0035621 | 61.111 | 108 | 40 | 2 | 27 | 133 | 25 | 131 | 4.35e-35 | 118 |
| Msa0055180 | MtrunA17_Chr8g0379311 | 60.550 | 109 | 41 | 2 | 27 | 134 | 25 | 132 | 4.84e-35 | 118 |
| Msa0055180 | MtrunA17_Chr4g0032301 | 59.633 | 109 | 42 | 2 | 27 | 134 | 25 | 132 | 5.44e-35 | 118 |
| Msa0055180 | MtrunA17_Chr4g0031001 | 59.633 | 109 | 42 | 2 | 27 | 134 | 25 | 132 | 6.61e-35 | 118 |
| Msa0055180 | MtrunA17_Chr4g0031651 | 59.633 | 109 | 42 | 2 | 27 | 134 | 25 | 132 | 6.76e-35 | 118 |
| Msa0055180 | MtrunA17_Chr2g0327931 | 60.185 | 108 | 41 | 2 | 27 | 133 | 24 | 130 | 8.79e-35 | 118 |
| Msa0055180 | MtrunA17_Chr7g0273341 | 53.448 | 116 | 40 | 5 | 19 | 132 | 50 | 153 | 3.35e-28 | 101 |
| Msa0055180 | MtrunA17_Chr4g0031031 | 62.687 | 67 | 24 | 1 | 55 | 120 | 17 | 83 | 3.79e-20 | 79.3 |
| Msa0055180 | MtrunA17_Chr6g0449661 | 45.283 | 106 | 47 | 4 | 27 | 130 | 86 | 182 | 6.63e-19 | 78.6 |
| Msa0055180 | MtrunA17_Chr3g0119971 | 44.340 | 106 | 48 | 4 | 27 | 130 | 81 | 177 | 1.70e-18 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055180 | AT1G52740.1 | 88.060 | 134 | 16 | 0 | 1 | 134 | 1 | 134 | 5.27e-76 | 222 |
| Msa0055180 | AT3G54560.1 | 84.559 | 136 | 19 | 1 | 1 | 134 | 1 | 136 | 7.75e-72 | 211 |
| Msa0055180 | AT3G54560.2 | 84.559 | 136 | 19 | 1 | 1 | 134 | 1 | 136 | 7.75e-72 | 211 |
| Msa0055180 | AT2G38810.1 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| Msa0055180 | AT2G38810.4 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| Msa0055180 | AT2G38810.3 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| Msa0055180 | AT2G38810.2 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| Msa0055180 | AT4G13570.1 | 66.667 | 111 | 33 | 1 | 18 | 124 | 8 | 118 | 3.28e-45 | 143 |
| Msa0055180 | AT4G13570.2 | 75.556 | 90 | 22 | 0 | 35 | 124 | 35 | 124 | 3.59e-44 | 141 |
| Msa0055180 | AT4G27230.2 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.42e-40 | 131 |
| Msa0055180 | AT4G27230.1 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.42e-40 | 131 |
| Msa0055180 | AT5G54640.1 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.45e-40 | 131 |
| Msa0055180 | AT3G20670.1 | 65.741 | 108 | 35 | 2 | 24 | 130 | 14 | 120 | 6.89e-40 | 130 |
| Msa0055180 | AT1G08880.1 | 64.762 | 105 | 35 | 2 | 25 | 128 | 21 | 124 | 1.01e-39 | 130 |
| Msa0055180 | AT1G51060.1 | 63.636 | 110 | 38 | 2 | 24 | 132 | 14 | 122 | 1.11e-39 | 130 |
| Msa0055180 | AT1G54690.1 | 63.810 | 105 | 36 | 2 | 25 | 128 | 21 | 124 | 2.89e-39 | 129 |
| Msa0055180 | AT5G02560.1 | 61.947 | 113 | 41 | 2 | 23 | 134 | 21 | 132 | 1.19e-38 | 128 |
| Msa0055180 | AT5G27670.1 | 60.870 | 115 | 43 | 2 | 19 | 132 | 18 | 131 | 4.54e-37 | 124 |
| Msa0055180 | AT5G59870.1 | 61.261 | 111 | 41 | 2 | 23 | 132 | 21 | 130 | 3.64e-36 | 121 |
| Msa0055180 | AT5G02560.2 | 51.095 | 137 | 41 | 3 | 23 | 134 | 21 | 156 | 3.79e-33 | 115 |
Find 56 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTCTTTGAGGTTTGC+TGG | 0.259581 | 1_2:-10063283 | None:intergenic |
| TCTTCTTGTCCTTGTCTTTG+AGG | 0.316058 | 1_2:-10063291 | None:intergenic |
| TTCCTCAAGAGCTGGTCTTC+AGG | 0.343744 | 1_2:+10063327 | Msa0055180:CDS |
| GGTGATAACAACTTTATTTG+TGG | 0.407928 | 1_2:+10066327 | Msa0055180:three_prime_UTR |
| CCTCTGCAGTTAAATATTCC+AGG | 0.413090 | 1_2:-10066064 | None:intergenic |
| GAACTGTTTGAACTGATTTG+AGG | 0.432017 | 1_2:+10066528 | Msa0055180:three_prime_UTR |
| CAATGGCACATGGAAGAGTT+GGG | 0.442531 | 1_2:+10066012 | Msa0055180:CDS |
| ATTTGCTCCTTGCGTTGGTT+TGG | 0.447241 | 1_2:+10066353 | Msa0055180:three_prime_UTR |
| TATGAACATTCATTCCTTCG+AGG | 0.453552 | 1_2:-10066255 | None:intergenic |
| AGTTTATTCTGCCGCTATCC+TGG | 0.454001 | 1_2:+10066046 | Msa0055180:CDS |
| ACAATGGCACATGGAAGAGT+TGG | 0.476378 | 1_2:+10066011 | Msa0055180:CDS |
| GGAGCGAAGGGTTTGACAAC+CGG | 0.477894 | 1_2:+10063253 | Msa0055180:CDS |
| TTGAAGTGCGAAAACATGTC+GGG | 0.483739 | 1_2:+10063226 | Msa0055180:exon |
| ATATTTAACTGCAGAGGTGT+TGG | 0.485770 | 1_2:+10066070 | Msa0055180:CDS |
| CTCATCAAAGGAACAATAGC+TGG | 0.487626 | 1_2:+10066188 | Msa0055180:CDS |
| GTTTGAACTGATTTGAGGAA+AGG | 0.499655 | 1_2:+10066533 | Msa0055180:three_prime_UTR |
| ATAAGAGACTTGTGGATATG+AGG | 0.507095 | 1_2:-10066224 | None:intergenic |
| GGATAATTTGCTCCTTGCGT+TGG | 0.524291 | 1_2:+10066348 | Msa0055180:three_prime_UTR |
| AGACGATGGATACGTCCGAC+AGG | 0.539450 | 1_2:-10065975 | None:intergenic |
| AACTGCAGAGGTGTTGGAGT+TGG | 0.540859 | 1_2:+10066076 | Msa0055180:CDS |
| AGCTCTTGAGGAACGAGATG+TGG | 0.542232 | 1_2:-10063317 | None:intergenic |
| AACCTGAAGACCAGCTCTTG+AGG | 0.543571 | 1_2:-10063329 | None:intergenic |
| ACATCTCGTTCCTCAAGAGC+TGG | 0.546311 | 1_2:+10063319 | Msa0055180:CDS |
| GCAGAGGTGTTGGAGTTGGC+TGG | 0.558822 | 1_2:+10066080 | Msa0055180:CDS |
| CAATGCAAGCAAGGATCTGA+AGG | 0.565081 | 1_2:+10066103 | Msa0055180:CDS |
| CATATGTCTAGGATTAATGT+TGG | 0.566765 | 1_2:+10066472 | Msa0055180:three_prime_UTR |
| TGCGAAAACATGTCGGGGAA+AGG | 0.567757 | 1_2:+10063232 | Msa0055180:exon |
| GTTGGCTGGCAATGCAAGCA+AGG | 0.571379 | 1_2:+10066094 | Msa0055180:CDS |
| GAACTTGACACTCTCATCAA+AGG | 0.571379 | 1_2:+10066176 | Msa0055180:CDS |
| AGTTTCAGATAATCTAAAGA+AGG | 0.572907 | 1_2:-10066389 | None:intergenic |
| ACTTGTTGATAAGAGACTTG+TGG | 0.572936 | 1_2:-10066232 | None:intergenic |
| TTTGAAGTGCGAAAACATGT+CGG | 0.580196 | 1_2:+10063225 | Msa0055180:exon |
| TGTCAAGTTCTTCGTCTCCA+CGG | 0.583078 | 1_2:-10066163 | None:intergenic |
| ATAGCAAGCTGTAGATGTCT+CGG | 0.584334 | 1_2:-10066140 | None:intergenic |
| CATCTACAGCTTGCTATCCG+TGG | 0.586408 | 1_2:+10066146 | Msa0055180:CDS |
| TCCATCGTCTTCTGAAGTCA+AGG | 0.589423 | 1_2:+10065988 | Msa0055180:CDS |
| TCAGATAATCTAAAGAAGGA+TGG | 0.590080 | 1_2:-10066385 | None:intergenic |
| GTATGGTACTGCATATGTCT+AGG | 0.597951 | 1_2:+10066461 | Msa0055180:three_prime_UTR |
| CATGTCGGGGAAAGGAGCGA+AGG | 0.599837 | 1_2:+10063240 | Msa0055180:exon |
| CAATCAACCAAACCAACGCA+AGG | 0.606435 | 1_2:-10066360 | None:intergenic |
| GCTCTTGAGGAACGAGATGT+GGG | 0.607406 | 1_2:-10063316 | None:intergenic |
| AAAGGAACAATAGCTGGTGG+TGG | 0.608922 | 1_2:+10066194 | Msa0055180:CDS |
| CCTGGAATATTTAACTGCAG+AGG | 0.615265 | 1_2:+10066064 | Msa0055180:CDS |
| TCTTATCAACAAGTCCTCGA+AGG | 0.615894 | 1_2:+10066241 | Msa0055180:CDS |
| AAGTCAAGGACAATGGCACA+TGG | 0.622887 | 1_2:+10066002 | Msa0055180:CDS |
| ATGTCGGGGAAAGGAGCGAA+GGG | 0.624226 | 1_2:+10063241 | Msa0055180:CDS |
| GACGATGGATACGTCCGACA+GGG | 0.626692 | 1_2:-10065974 | None:intergenic |
| TTCTACATACAGTTCCCTGT+CGG | 0.628096 | 1_2:+10065960 | Msa0055180:intron |
| ACCAGCAAACCTCAAAGACA+AGG | 0.637885 | 1_2:+10063282 | Msa0055180:CDS |
| TAATTCGTTCTAATTAACGC+AGG | 0.639924 | 1_2:+10066276 | Msa0055180:three_prime_UTR |
| AATGGCACATGGAAGAGTTG+GGG | 0.645846 | 1_2:+10066013 | Msa0055180:CDS |
| TGAAGTGCGAAAACATGTCG+GGG | 0.651409 | 1_2:+10063227 | Msa0055180:exon |
| TCTTCTGAAGTCAAGGACAA+TGG | 0.655563 | 1_2:+10065995 | Msa0055180:CDS |
| ATCAAAGGAACAATAGCTGG+TGG | 0.661257 | 1_2:+10066191 | Msa0055180:CDS |
| TCCTTGACTTCAGAAGACGA+TGG | 0.668973 | 1_2:-10065989 | None:intergenic |
| AGTTAAATATTCCAGGATAG+CGG | 0.686777 | 1_2:-10066057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTATTTTTTTGTTAAA+AGG | + | chr1_2:10063521-10063540 | Msa0055180:intron | 10.0% |
| !!! | CATAAACATAAAAAATATTT+TGG | + | chr1_2:10064825-10064844 | Msa0055180:intron | 10.0% |
| !!! | TTTTTAAGTTATAGTATTTT+AGG | + | chr1_2:10064922-10064941 | Msa0055180:intron | 10.0% |
| !!! | TTTTTTTGTTAAAAGGATAA+TGG | + | chr1_2:10063528-10063547 | Msa0055180:intron | 15.0% |
| !!! | TTTTTTGTTAAAAGGATAAT+GGG | + | chr1_2:10063529-10063548 | Msa0055180:intron | 15.0% |
| !!! | TTTTTATCAAGATTCAAATT+TGG | + | chr1_2:10063633-10063652 | Msa0055180:intron | 15.0% |
| !!! | TTTTATCAAGATTCAAATTT+GGG | + | chr1_2:10063634-10063653 | Msa0055180:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1_2:10065259-10065278 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr1_2:10065283-10065302 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr1_2:10065282-10065301 | Msa0055180:intron | 15.0% |
| !! | AATGATTAAAATAAAGAGAA+TGG | - | chr1_2:10065316-10065335 | None:intergenic | 15.0% |
| !!! | AGTATTATTTTATAACTGTT+TGG | + | chr1_2:10065392-10065411 | Msa0055180:intron | 15.0% |
| !!! | TTTTTATCTAAGATGAAGAA+TGG | + | chr1_2:10063593-10063612 | Msa0055180:intron | 20.0% |
| !!! | AATTACCTTGTTTTGTTTTA+TGG | + | chr1_2:10063827-10063846 | Msa0055180:intron | 20.0% |
| !!! | TTGAATTTTATTGAACAACT+TGG | + | chr1_2:10064000-10064019 | Msa0055180:intron | 20.0% |
| !!! | TCAAATTAGTTTCAGAATTA+TGG | + | chr1_2:10064053-10064072 | Msa0055180:intron | 20.0% |
| !!! | AGAAGGGAAATAATAATTTT+AGG | - | chr1_2:10064450-10064469 | None:intergenic | 20.0% |
| !! | TTATTATTTCCCTTCTTAAT+AGG | + | chr1_2:10064454-10064473 | Msa0055180:intron | 20.0% |
| !! | TATGTTTGTATATATGAGTA+AGG | + | chr1_2:10064497-10064516 | Msa0055180:intron | 20.0% |
| !! | ACGTATAATATATATACAAG+AGG | - | chr1_2:10064695-10064714 | None:intergenic | 20.0% |
| !! | AAAATTTCTTAGTGATTCAT+TGG | - | chr1_2:10064899-10064918 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_2:10065196-10065215 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr1_2:10065273-10065292 | Msa0055180:intron | 20.0% |
| !!! | GATGGATTTTAATGTAATTT+CGG | + | chr1_2:10066306-10066325 | Msa0055180:three_prime_UTR | 20.0% |
| !!! | AACTTTTTTCTCTTTTGATA+TGG | + | chr1_2:10066408-10066427 | Msa0055180:three_prime_UTR | 20.0% |
| ! | AGTGAAAAAGGTTAAATTTG+AGG | - | chr1_2:10063417-10063436 | None:intergenic | 25.0% |
| ! | GAAAATCACTATATAGACAA+CGG | - | chr1_2:10063705-10063724 | None:intergenic | 25.0% |
| ! | CAGTTAAGCAAATTGAAAAT+GGG | - | chr1_2:10063754-10063773 | None:intergenic | 25.0% |
| ! | TCAGTTAAGCAAATTGAAAA+TGG | - | chr1_2:10063755-10063774 | None:intergenic | 25.0% |
| ! | ATAAGCCATAAAACAAAACA+AGG | - | chr1_2:10063835-10063854 | None:intergenic | 25.0% |
| ! | TTTCCATTTGCAAATTTCAT+GGG | - | chr1_2:10063965-10063984 | None:intergenic | 25.0% |
| !! | TTTTCCATTTGCAAATTTCA+TGG | - | chr1_2:10063966-10063985 | None:intergenic | 25.0% |
| ! | TATTAATTATCTGTGTGTAG+GGG | - | chr1_2:10064133-10064152 | None:intergenic | 25.0% |
| ! | CTATTAATTATCTGTGTGTA+GGG | - | chr1_2:10064134-10064153 | None:intergenic | 25.0% |
| ! | ACTATTAATTATCTGTGTGT+AGG | - | chr1_2:10064135-10064154 | None:intergenic | 25.0% |
| !!! | GGCTGTTTATTTTATTTCTT+TGG | + | chr1_2:10064292-10064311 | Msa0055180:intron | 25.0% |
| ! | AAAGGAAGACAATAAACTAA+AGG | - | chr1_2:10064353-10064372 | None:intergenic | 25.0% |
| !! | TCTCTTTTCGAAAAAAGAAA+AGG | - | chr1_2:10064371-10064390 | None:intergenic | 25.0% |
| !!! | GGGAAATAATAATTTTAGGA+GGG | - | chr1_2:10064446-10064465 | None:intergenic | 25.0% |
| !! | AGGGAAATAATAATTTTAGG+AGG | - | chr1_2:10064447-10064466 | None:intergenic | 25.0% |
| ! | ACATATACACCTATTAAGAA+GGG | - | chr1_2:10064466-10064485 | None:intergenic | 25.0% |
| ! | TACATATACACCTATTAAGA+AGG | - | chr1_2:10064467-10064486 | None:intergenic | 25.0% |
| ! | TGTAGTTATCACTTAATCTT+TGG | + | chr1_2:10064717-10064736 | Msa0055180:intron | 25.0% |
| !!! | ATTTTAGCATGCTTAAAATG+TGG | - | chr1_2:10065852-10065871 | None:intergenic | 25.0% |
| ! | GTAAATTATGTTGCATTTGT+TGG | + | chr1_2:10065885-10065904 | Msa0055180:intron | 25.0% |
| ! | AGTTTCAGATAATCTAAAGA+AGG | - | chr1_2:10066392-10066411 | None:intergenic | 25.0% |
| AAGAAAACGATGAAACGAAA+GGG | - | chr1_2:10063374-10063393 | None:intergenic | 30.0% | |
| CCTAAACAAAACAGTGAAAA+AGG | - | chr1_2:10063429-10063448 | None:intergenic | 30.0% | |
| !!! | CCTTTTTCACTGTTTTGTTT+AGG | + | chr1_2:10063426-10063445 | Msa0055180:intron | 30.0% |
| TACTTTAGCGATGTAACATA+AGG | - | chr1_2:10063475-10063494 | None:intergenic | 30.0% | |
| AATTTCATGGGTGTAAATGT+TGG | - | chr1_2:10063953-10063972 | None:intergenic | 30.0% | |
| ATCAGATAAAAGTTAGGAGA+AGG | - | chr1_2:10064027-10064046 | None:intergenic | 30.0% | |
| ! | CCTAACTTTTATCTGATCTA+CGG | + | chr1_2:10064030-10064049 | Msa0055180:intron | 30.0% |
| TTAGTTTCAGAATTATGGCA+CGG | + | chr1_2:10064058-10064077 | Msa0055180:intron | 30.0% | |
| TTGAATATGTTCACATGTGT+CGG | + | chr1_2:10064172-10064191 | Msa0055180:intron | 30.0% | |
| ! | TTGGACTTTTAATAGAGACT+AGG | + | chr1_2:10064311-10064330 | Msa0055180:intron | 30.0% |
| TCTAATACTCACTCTCTTAT+TGG | + | chr1_2:10064548-10064567 | Msa0055180:intron | 30.0% | |
| ATATATACAAGAGGAATGCT+AGG | - | chr1_2:10064686-10064705 | None:intergenic | 30.0% | |
| AGTTATCACTTAATCTTTGG+TGG | + | chr1_2:10064720-10064739 | Msa0055180:intron | 30.0% | |
| TGCGAAAGAATACAAACAAA+AGG | - | chr1_2:10064807-10064826 | None:intergenic | 30.0% | |
| !!! | TGTTTTATTTGTCAAGACCA+AGG | - | chr1_2:10064865-10064884 | None:intergenic | 30.0% |
| ! | TGGTCTTGACAAATAAAACA+TGG | + | chr1_2:10064865-10064884 | Msa0055180:intron | 30.0% |
| GGTCTTGACAAATAAAACAT+GGG | + | chr1_2:10064866-10064885 | Msa0055180:intron | 30.0% | |
| CTTGTGAGGAAAAATTATCT+TGG | + | chr1_2:10064960-10064979 | Msa0055180:intron | 30.0% | |
| ! | ACTTGATAAGAAGTCTTATG+AGG | + | chr1_2:10065085-10065104 | Msa0055180:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr1_2:10065364-10065383 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr1_2:10065365-10065384 | Msa0055180:intron | 30.0% |
| !!! | AGCTTGAATGGTTTTTTGTA+GGG | - | chr1_2:10065420-10065439 | None:intergenic | 30.0% |
| ! | CAAAAAATCTTTGACTTACC+AGG | - | chr1_2:10065668-10065687 | None:intergenic | 30.0% |
| ! | TGATTATTTCCTTTTGCAAG+CGG | + | chr1_2:10065781-10065800 | Msa0055180:intron | 30.0% |
| AATAATTAACCGCTTGCAAA+AGG | - | chr1_2:10065793-10065812 | None:intergenic | 30.0% | |
| ATGTAGAAAGATGTTCATGA+TGG | - | chr1_2:10065948-10065967 | None:intergenic | 30.0% | |
| AGTTAAATATTCCAGGATAG+CGG | - | chr1_2:10066060-10066079 | None:intergenic | 30.0% | |
| TAATTCGTTCTAATTAACGC+AGG | + | chr1_2:10066276-10066295 | Msa0055180:three_prime_UTR | 30.0% | |
| ATTAACGCAGGAAAAAAAGA+TGG | + | chr1_2:10066288-10066307 | Msa0055180:three_prime_UTR | 30.0% | |
| ! | GGTGATAACAACTTTATTTG+TGG | + | chr1_2:10066327-10066346 | Msa0055180:three_prime_UTR | 30.0% |
| TCAGATAATCTAAAGAAGGA+TGG | - | chr1_2:10066388-10066407 | None:intergenic | 30.0% | |
| !! | ACATTCTCACTTTTGTTGTA+TGG | + | chr1_2:10066444-10066463 | Msa0055180:three_prime_UTR | 30.0% |
| ! | CATATGTCTAGGATTAATGT+TGG | + | chr1_2:10066472-10066491 | Msa0055180:three_prime_UTR | 30.0% |
| ! | TTTGAAGTGCGAAAACATGT+CGG | + | chr1_2:10063225-10063244 | Msa0055180:exon | 35.0% |
| AGAAAACGATGAAACGAAAG+GGG | - | chr1_2:10063373-10063392 | None:intergenic | 35.0% | |
| CAAGAAAACGATGAAACGAA+AGG | - | chr1_2:10063375-10063394 | None:intergenic | 35.0% | |
| GATTTCTTGTGTCATGTTGA+TGG | + | chr1_2:10063773-10063792 | Msa0055180:intron | 35.0% | |
| ACAAAATCAGTGGCATATCT+AGG | + | chr1_2:10063870-10063889 | Msa0055180:intron | 35.0% | |
| ! | ATATCTAGGACCTTGAGTTA+GGG | + | chr1_2:10063884-10063903 | Msa0055180:intron | 35.0% |
| ACACCCATGAAATTTGCAAA+TGG | + | chr1_2:10063959-10063978 | Msa0055180:intron | 35.0% | |
| CCGTAGATCAGATAAAAGTT+AGG | - | chr1_2:10064033-10064052 | None:intergenic | 35.0% | |
| ACGCCTTTAATCTTAAGTGT+TGG | + | chr1_2:10064254-10064273 | Msa0055180:intron | 35.0% | |
| GCACCAACACTTAAGATTAA+AGG | - | chr1_2:10064260-10064279 | None:intergenic | 35.0% | |
| !! | TGTTGGTGCTACATTGTTTA+TGG | + | chr1_2:10064271-10064290 | Msa0055180:intron | 35.0% |
| CTAAAGGAGACTTCAAATCA+AGG | - | chr1_2:10064337-10064356 | None:intergenic | 35.0% | |
| GAAAAGAGATGATGCATGAA+TGG | + | chr1_2:10064382-10064401 | Msa0055180:intron | 35.0% | |
| !! | TAATAATTTTAGGAGGGCCA+TGG | - | chr1_2:10064440-10064459 | None:intergenic | 35.0% |
| AAAATTGAACCCACACAAAG+TGG | + | chr1_2:10064598-10064617 | Msa0055180:intron | 35.0% | |
| ! | AAATGCTAACAAGTCTTGTG+AGG | + | chr1_2:10064946-10064965 | Msa0055180:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr1_2:10065130-10065149 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_2:10065230-10065249 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1_2:10065234-10065253 | None:intergenic | 35.0% |
| !!! | CTTGAATGGTTTTTTGTAGG+GGG | - | chr1_2:10065418-10065437 | None:intergenic | 35.0% |
| !!! | GCTTGAATGGTTTTTTGTAG+GGG | - | chr1_2:10065419-10065438 | None:intergenic | 35.0% |
| !!! | GAGCTTGAATGGTTTTTTGT+AGG | - | chr1_2:10065421-10065440 | None:intergenic | 35.0% |
| ! | TACATTTTCCTTCTCGCTTT+TGG | + | chr1_2:10065592-10065611 | Msa0055180:intron | 35.0% |
| TTAGTAATCCAAAAGCGAGA+AGG | - | chr1_2:10065603-10065622 | None:intergenic | 35.0% | |
| !! | GCATGCTAAAATTTGTTGTC+TGG | + | chr1_2:10065860-10065879 | Msa0055180:intron | 35.0% |
| ATTTATCCCACATCATCATC+CGG | + | chr1_2:10065918-10065937 | Msa0055180:intron | 35.0% | |
| ! | AGATGTTCATGATGGAAAAC+CGG | - | chr1_2:10065940-10065959 | None:intergenic | 35.0% |
| ! | ATATTTAACTGCAGAGGTGT+TGG | + | chr1_2:10066070-10066089 | Msa0055180:CDS | 35.0% |
| ATAAGAGACTTGTGGATATG+AGG | - | chr1_2:10066227-10066246 | None:intergenic | 35.0% | |
| ! | ACTTGTTGATAAGAGACTTG+TGG | - | chr1_2:10066235-10066254 | None:intergenic | 35.0% |
| TATGAACATTCATTCCTTCG+AGG | - | chr1_2:10066258-10066277 | None:intergenic | 35.0% | |
| !! | GAACTGTTTGAACTGATTTG+AGG | + | chr1_2:10066528-10066547 | Msa0055180:three_prime_UTR | 35.0% |
| !! | GTTTGAACTGATTTGAGGAA+AGG | + | chr1_2:10066533-10066552 | Msa0055180:three_prime_UTR | 35.0% |
| TTGAAGTGCGAAAACATGTC+GGG | + | chr1_2:10063226-10063245 | Msa0055180:exon | 40.0% | |
| TCTTCTTGTCCTTGTCTTTG+AGG | - | chr1_2:10063294-10063313 | None:intergenic | 40.0% | |
| !! | TGTCATGTTGATGGTGTACA+TGG | + | chr1_2:10063782-10063801 | Msa0055180:intron | 40.0% |
| ! | CATATCTAGGACCTTGAGTT+AGG | + | chr1_2:10063883-10063902 | Msa0055180:intron | 40.0% |
| ! | TATCTAGGACCTTGAGTTAG+GGG | + | chr1_2:10063885-10063904 | Msa0055180:intron | 40.0% |
| AATTCGCCTCATGAAACTGT+AGG | + | chr1_2:10063924-10063943 | Msa0055180:intron | 40.0% | |
| TAATTATCTGTGTGTAGGGG+CGG | - | chr1_2:10064130-10064149 | None:intergenic | 40.0% | |
| TACCAACACATGTTTCACTC+CGG | + | chr1_2:10064229-10064248 | Msa0055180:intron | 40.0% | |
| !! | CTTAAGATTAAAGGCGTCTC+CGG | - | chr1_2:10064251-10064270 | None:intergenic | 40.0% |
| !!! | CAGTGGTAATCCGCTTTTTT+TGG | + | chr1_2:10064745-10064764 | Msa0055180:intron | 40.0% |
| CTCATAGGAGCCAAAAAAAG+CGG | - | chr1_2:10064758-10064777 | None:intergenic | 40.0% | |
| TCTTCTTAACAAGTGCCCTA+AGG | + | chr1_2:10065060-10065079 | Msa0055180:intron | 40.0% | |
| CTTCTTAACAAGTGCCCTAA+GGG | + | chr1_2:10065061-10065080 | Msa0055180:intron | 40.0% | |
| CTTCTTATCAAGTGCCCTTA+GGG | - | chr1_2:10065078-10065097 | None:intergenic | 40.0% | |
| ACTTCTTATCAAGTGCCCTT+AGG | - | chr1_2:10065079-10065098 | None:intergenic | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_2:10065231-10065250 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_2:10065369-10065388 | Msa0055180:intron | 40.0% |
| AAGTAGCAGCCTGACATAAA+AGG | + | chr1_2:10065639-10065658 | Msa0055180:intron | 40.0% | |
| CTGTGAGTGACTAGTATCTT+TGG | + | chr1_2:10065747-10065766 | Msa0055180:intron | 40.0% | |
| TTCTACATACAGTTCCCTGT+CGG | + | chr1_2:10065960-10065979 | Msa0055180:intron | 40.0% | |
| !! | TCTTCTGAAGTCAAGGACAA+TGG | + | chr1_2:10065995-10066014 | Msa0055180:CDS | 40.0% |
| CCTCTGCAGTTAAATATTCC+AGG | - | chr1_2:10066067-10066086 | None:intergenic | 40.0% | |
| CCTGGAATATTTAACTGCAG+AGG | + | chr1_2:10066064-10066083 | Msa0055180:CDS | 40.0% | |
| ATAGCAAGCTGTAGATGTCT+CGG | - | chr1_2:10066143-10066162 | None:intergenic | 40.0% | |
| GAACTTGACACTCTCATCAA+AGG | + | chr1_2:10066176-10066195 | Msa0055180:CDS | 40.0% | |
| CTCATCAAAGGAACAATAGC+TGG | + | chr1_2:10066188-10066207 | Msa0055180:CDS | 40.0% | |
| ATCAAAGGAACAATAGCTGG+TGG | + | chr1_2:10066191-10066210 | Msa0055180:CDS | 40.0% | |
| TCTTATCAACAAGTCCTCGA+AGG | + | chr1_2:10066241-10066260 | Msa0055180:CDS | 40.0% | |
| GTATGGTACTGCATATGTCT+AGG | + | chr1_2:10066461-10066480 | Msa0055180:three_prime_UTR | 40.0% | |
| TGAAGTGCGAAAACATGTCG+GGG | + | chr1_2:10063227-10063246 | Msa0055180:exon | 45.0% | |
| !!! | GAGGTTTGCTGGTGTTTTAC+CGG | - | chr1_2:10063275-10063294 | None:intergenic | 45.0% |
| ACCAGCAAACCTCAAAGACA+AGG | + | chr1_2:10063282-10063301 | Msa0055180:CDS | 45.0% | |
| !! | TCCTTGTCTTTGAGGTTTGC+TGG | - | chr1_2:10063286-10063305 | None:intergenic | 45.0% |
| GCGCACAAACACAAAATCAG+TGG | + | chr1_2:10063860-10063879 | Msa0055180:intron | 45.0% | |
| ! | ATCTAGGACCTTGAGTTAGG+GGG | + | chr1_2:10063886-10063905 | Msa0055180:intron | 45.0% |
| TGGACTCCTACAGTTTCATG+AGG | - | chr1_2:10063933-10063952 | None:intergenic | 45.0% | |
| ! | TATGTTCACATGTGTCGGTG+TGG | + | chr1_2:10064177-10064196 | Msa0055180:intron | 45.0% |
| AGATGATGCATGAATGGCTG+TGG | + | chr1_2:10064388-10064407 | Msa0055180:intron | 45.0% | |
| ATTGAACCCACACAAAGTGG+TGG | + | chr1_2:10064601-10064620 | Msa0055180:intron | 45.0% | |
| TTGAACCCACACAAAGTGGT+GGG | + | chr1_2:10064602-10064621 | Msa0055180:intron | 45.0% | |
| TATGTCCCACCACTTTGTGT+GGG | - | chr1_2:10064610-10064629 | None:intergenic | 45.0% | |
| ! | CTCTCTAGCACTCACTCTTT+TGG | - | chr1_2:10064645-10064664 | None:intergenic | 45.0% |
| !! | CTTAATCTTTGGTGGTGCAG+TGG | + | chr1_2:10064728-10064747 | Msa0055180:intron | 45.0% |
| !!! | CGCTTTTTTTGGCTCCTATG+AGG | + | chr1_2:10064756-10064775 | Msa0055180:intron | 45.0% |
| ACTCGAGCTTCTATCCTCAT+AGG | - | chr1_2:10064773-10064792 | None:intergenic | 45.0% | |
| TGGAGATGTGATTCGAACCT+TGG | + | chr1_2:10064845-10064864 | Msa0055180:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1_2:10065368-10065387 | Msa0055180:intron | 45.0% |
| TATCAGCGACAGAGCTTGAA+TGG | - | chr1_2:10065432-10065451 | None:intergenic | 45.0% | |
| TTCAAGCTCTGTCGCTGATA+AGG | + | chr1_2:10065432-10065451 | Msa0055180:intron | 45.0% | |
| !! | TATGTCAGGCTGCTACTTTG+CGG | - | chr1_2:10065637-10065656 | None:intergenic | 45.0% |
| ! | GGAAAACCGGATGATGATGT+GGG | - | chr1_2:10065927-10065946 | None:intergenic | 45.0% |
| ! | TGGAAAACCGGATGATGATG+TGG | - | chr1_2:10065928-10065947 | None:intergenic | 45.0% |
| !! | TCCATCGTCTTCTGAAGTCA+AGG | + | chr1_2:10065988-10066007 | Msa0055180:CDS | 45.0% |
| TCCTTGACTTCAGAAGACGA+TGG | - | chr1_2:10065992-10066011 | None:intergenic | 45.0% | |
| AAGTCAAGGACAATGGCACA+TGG | + | chr1_2:10066002-10066021 | Msa0055180:CDS | 45.0% | |
| ACAATGGCACATGGAAGAGT+TGG | + | chr1_2:10066011-10066030 | Msa0055180:CDS | 45.0% | |
| CAATGGCACATGGAAGAGTT+GGG | + | chr1_2:10066012-10066031 | Msa0055180:CDS | 45.0% | |
| AATGGCACATGGAAGAGTTG+GGG | + | chr1_2:10066013-10066032 | Msa0055180:CDS | 45.0% | |
| AGTTTATTCTGCCGCTATCC+TGG | + | chr1_2:10066046-10066065 | Msa0055180:CDS | 45.0% | |
| CAATGCAAGCAAGGATCTGA+AGG | + | chr1_2:10066103-10066122 | Msa0055180:CDS | 45.0% | |
| TGTCAAGTTCTTCGTCTCCA+CGG | - | chr1_2:10066166-10066185 | None:intergenic | 45.0% | |
| AAAGGAACAATAGCTGGTGG+TGG | + | chr1_2:10066194-10066213 | Msa0055180:CDS | 45.0% | |
| !! | GGATAATTTGCTCCTTGCGT+TGG | + | chr1_2:10066348-10066367 | Msa0055180:three_prime_UTR | 45.0% |
| !! | ATTTGCTCCTTGCGTTGGTT+TGG | + | chr1_2:10066353-10066372 | Msa0055180:three_prime_UTR | 45.0% |
| CAATCAACCAAACCAACGCA+AGG | - | chr1_2:10066363-10066382 | None:intergenic | 45.0% | |
| TGCGAAAACATGTCGGGGAA+AGG | + | chr1_2:10063232-10063251 | Msa0055180:exon | 50.0% | |
| GCTCTTGAGGAACGAGATGT+GGG | - | chr1_2:10063319-10063338 | None:intergenic | 50.0% | |
| AGCTCTTGAGGAACGAGATG+TGG | - | chr1_2:10063320-10063339 | None:intergenic | 50.0% | |
| ACATCTCGTTCCTCAAGAGC+TGG | + | chr1_2:10063319-10063338 | Msa0055180:CDS | 50.0% | |
| !! | TTCCTCAAGAGCTGGTCTTC+AGG | + | chr1_2:10063327-10063346 | Msa0055180:CDS | 50.0% |
| AACCTGAAGACCAGCTCTTG+AGG | - | chr1_2:10063332-10063351 | None:intergenic | 50.0% | |
| ! | TCTAGGACCTTGAGTTAGGG+GGG | + | chr1_2:10063887-10063906 | Msa0055180:intron | 50.0% |
| AAGTTTGCCCCCCTAACTCA+AGG | - | chr1_2:10063897-10063916 | None:intergenic | 50.0% | |
| CTCCGGAGTGAAACATGTGT+TGG | - | chr1_2:10064234-10064253 | None:intergenic | 50.0% | |
| TGATGCATGAATGGCTGTGG+CGG | + | chr1_2:10064391-10064410 | Msa0055180:intron | 50.0% | |
| CGGATGGTAGAAGGGATAGA+GGG | + | chr1_2:10064411-10064430 | Msa0055180:intron | 50.0% | |
| ATGGTAGAAGGGATAGAGGG+TGG | + | chr1_2:10064414-10064433 | Msa0055180:intron | 50.0% | |
| GTATGTCCCACCACTTTGTG+TGG | - | chr1_2:10064611-10064630 | None:intergenic | 50.0% | |
| TCTGTCGCTGATAAGGTGAG+CGG | + | chr1_2:10065439-10065458 | Msa0055180:intron | 50.0% | |
| ! | ACCAGGCAGCCTTTTATGTC+AGG | - | chr1_2:10065651-10065670 | None:intergenic | 50.0% |
| TGCTTCAGCCACATGTGTCA+TGG | + | chr1_2:10065692-10065711 | Msa0055180:intron | 50.0% | |
| TGCTGTAGCCATGACACATG+TGG | - | chr1_2:10065703-10065722 | None:intergenic | 50.0% | |
| ACATGTGTCATGGCTACAGC+AGG | + | chr1_2:10065702-10065721 | Msa0055180:intron | 50.0% | |
| !! | AACTGCAGAGGTGTTGGAGT+TGG | + | chr1_2:10066076-10066095 | Msa0055180:CDS | 50.0% |
| !! | CATCTACAGCTTGCTATCCG+TGG | + | chr1_2:10066146-10066165 | Msa0055180:CDS | 50.0% |
| ATGTCGGGGAAAGGAGCGAA+GGG | + | chr1_2:10063241-10063260 | Msa0055180:CDS | 55.0% | |
| GGAGCGAAGGGTTTGACAAC+CGG | + | chr1_2:10063253-10063272 | Msa0055180:CDS | 55.0% | |
| ! | CACATGTGTCGGTGTGGTGT+CGG | + | chr1_2:10064183-10064202 | Msa0055180:intron | 55.0% |
| ! | ACATGTGTCGGTGTGGTGTC+GGG | + | chr1_2:10064184-10064203 | Msa0055180:intron | 55.0% |
| GCGGATGGTAGAAGGGATAG+AGG | + | chr1_2:10064410-10064429 | Msa0055180:intron | 55.0% | |
| GCCTGACATAAAAGGCTGCC+TGG | + | chr1_2:10065647-10065666 | Msa0055180:intron | 55.0% | |
| GACGATGGATACGTCCGACA+GGG | - | chr1_2:10065977-10065996 | None:intergenic | 55.0% | |
| AGACGATGGATACGTCCGAC+AGG | - | chr1_2:10065978-10065997 | None:intergenic | 55.0% | |
| GTTGGCTGGCAATGCAAGCA+AGG | + | chr1_2:10066094-10066113 | Msa0055180:CDS | 55.0% | |
| CATGTCGGGGAAAGGAGCGA+AGG | + | chr1_2:10063240-10063259 | Msa0055180:exon | 60.0% | |
| ! | GCATGAATGGCTGTGGCGGA+TGG | + | chr1_2:10064395-10064414 | Msa0055180:intron | 60.0% |
| !! | TGGCTGTGGCGGATGGTAGA+AGG | + | chr1_2:10064402-10064421 | Msa0055180:intron | 60.0% |
| !! | GGCTGTGGCGGATGGTAGAA+GGG | + | chr1_2:10064403-10064422 | Msa0055180:intron | 60.0% |
| GAAGGGATAGAGGGTGGCCA+TGG | + | chr1_2:10064420-10064439 | Msa0055180:intron | 60.0% | |
| !! | GCAGAGGTGTTGGAGTTGGC+TGG | + | chr1_2:10066080-10066099 | Msa0055180:CDS | 60.0% |
| ! | TGTCGGTGTGGTGTCGGGCT+TGG | + | chr1_2:10064189-10064208 | Msa0055180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 10063184 | 10066558 | 10063184 | ID=Msa0055180;Name=Msa0055180 |
| chr1_2 | mRNA | 10063184 | 10066558 | 10063184 | ID=Msa0055180-mRNA-1;Parent=Msa0055180;Name=Msa0055180-mRNA-1;_AED=0.28;_eAED=0.28;_QI=57|1|1|1|1|1|2|290|134 |
| chr1_2 | exon | 10063184 | 10063348 | 10063184 | ID=Msa0055180-mRNA-1:exon:3783;Parent=Msa0055180-mRNA-1 |
| chr1_2 | exon | 10065972 | 10066558 | 10065972 | ID=Msa0055180-mRNA-1:exon:3784;Parent=Msa0055180-mRNA-1 |
| chr1_2 | five_prime_UTR | 10063184 | 10063240 | 10063184 | ID=Msa0055180-mRNA-1:five_prime_utr;Parent=Msa0055180-mRNA-1 |
| chr1_2 | CDS | 10063241 | 10063348 | 10063241 | ID=Msa0055180-mRNA-1:cds;Parent=Msa0055180-mRNA-1 |
| chr1_2 | CDS | 10065972 | 10066268 | 10065972 | ID=Msa0055180-mRNA-1:cds;Parent=Msa0055180-mRNA-1 |
| chr1_2 | three_prime_UTR | 10066269 | 10066558 | 10066269 | ID=Msa0055180-mRNA-1:three_prime_utr;Parent=Msa0055180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
