Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120530 | AES80607.2 | 93.684 | 380 | 16 | 1 | 1 | 380 | 24 | 395 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120530 | sp|Q8LFD1|LPP3_ARATH | 65.229 | 371 | 117 | 5 | 9 | 379 | 5 | 363 | 5.07e-174 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120530 | G7KV76 | 93.684 | 380 | 16 | 1 | 1 | 380 | 24 | 395 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1120530 | 0.800311 | 1.529515e-48 | -8.615850e-47 |
| Msa0021810 | Msa1120530 | 0.802072 | 6.673240e-49 | -8.615850e-47 |
| Msa0064560 | Msa1120530 | 0.842990 | 1.844993e-58 | -8.615850e-47 |
| Msa0079080 | Msa1120530 | 0.812110 | 4.998228e-51 | -8.615850e-47 |
| Msa0110970 | Msa1120530 | 0.819121 | 1.371335e-52 | -8.615850e-47 |
| Msa0725250 | Msa1120530 | 0.807483 | 4.945638e-50 | -8.615850e-47 |
| Msa0756630 | Msa1120530 | -0.807804 | 4.225674e-50 | -8.615850e-47 |
| Msa0760380 | Msa1120530 | 0.824154 | 9.410730e-54 | -8.615850e-47 |
| Msa0782970 | Msa1120530 | 0.800510 | 1.393612e-48 | -8.615850e-47 |
| Msa0157290 | Msa1120530 | 0.800137 | 1.659848e-48 | -8.615850e-47 |
| Msa0196130 | Msa1120530 | -0.813529 | 2.444843e-51 | -8.615850e-47 |
| Msa0234600 | Msa1120530 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0414950 | Msa1120530 | -0.805230 | 1.475770e-49 | -8.615850e-47 |
| Msa0435460 | Msa1120530 | 0.810685 | 1.019302e-50 | -8.615850e-47 |
| Msa0469160 | Msa1120530 | 0.800044 | 1.733029e-48 | -8.615850e-47 |
| Msa1004900 | Msa1120530 | -0.813214 | 2.867034e-51 | -8.615850e-47 |
| Msa1023400 | Msa1120530 | 0.808001 | 3.837713e-50 | -8.615850e-47 |
| Msa1036390 | Msa1120530 | 0.814062 | 1.865395e-51 | -8.615850e-47 |
| Msa1040120 | Msa1120530 | 0.846520 | 2.062831e-59 | -8.615850e-47 |
| Msa1069310 | Msa1120530 | 0.875310 | 3.408215e-68 | -8.615850e-47 |
| Msa1104000 | Msa1120530 | 0.801334 | 9.455777e-49 | -8.615850e-47 |
| Msa0264350 | Msa1120530 | 0.804474 | 2.122802e-49 | -8.615850e-47 |
| Msa0313410 | Msa1120530 | 0.802312 | 5.955964e-49 | -8.615850e-47 |
| Msa0337330 | Msa1120530 | 0.804911 | 1.720913e-49 | -8.615850e-47 |
| Msa1116130 | Msa1120530 | -0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa1120530 | Msa1128160 | 0.826600 | 2.481274e-54 | -8.615850e-47 |
| Msa1120530 | Msa1157170 | 0.838914 | 2.166231e-57 | -8.615850e-47 |
| Msa1120530 | Msa1165360 | 0.827442 | 1.561162e-54 | -8.615850e-47 |
| Msa1120530 | Msa1222970 | 0.825876 | 3.691399e-54 | -8.615850e-47 |
| Msa1120530 | Msa1242240 | 0.822491 | 2.302977e-53 | -8.615850e-47 |
| Msa1120530 | Msa1264020 | 0.829236 | 5.762095e-55 | -8.615850e-47 |
| Msa1120530 | Msa1267220 | 0.801395 | 9.187428e-49 | -8.615850e-47 |
| Msa1120530 | Msa1271280 | 0.819088 | 1.395745e-52 | -8.615850e-47 |
| Msa1120530 | Msa1271300 | 0.823015 | 1.738875e-53 | -8.615850e-47 |
| Msa1120530 | Msa1283840 | 0.816017 | 6.868777e-52 | -8.615850e-47 |
| Msa1120530 | Msa1284260 | 0.847675 | 9.955746e-60 | -8.615850e-47 |
| Msa1120530 | Msa1322860 | 0.817745 | 2.812106e-52 | -8.615850e-47 |
| Msa1120530 | Msa1322890 | 0.804184 | 2.439552e-49 | -8.615850e-47 |
| Msa1120530 | Msa1327050 | 0.845933 | 2.980327e-59 | -8.615850e-47 |
| Msa1120530 | Msa1367080 | 0.823205 | 1.569897e-53 | -8.615850e-47 |
| Msa1120530 | Msa1395230 | -0.808284 | 3.340030e-50 | -8.615850e-47 |
| Msa1120530 | Msa1445610 | -0.805701 | 1.175573e-49 | -8.615850e-47 |
| Msa0581760 | Msa1120530 | 0.807768 | 4.301629e-50 | -8.615850e-47 |
| Msa0585000 | Msa1120530 | -0.800195 | 1.615298e-48 | -8.615850e-47 |
| Msa0866760 | Msa1120530 | 0.806645 | 7.440080e-50 | -8.615850e-47 |
| Msa0878500 | Msa1120530 | 0.810054 | 1.394708e-50 | -8.615850e-47 |
| Msa0880140 | Msa1120530 | 0.800986 | 1.113937e-48 | -8.615850e-47 |
| Msa0944190 | Msa1120530 | 0.806314 | 8.738172e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120530 | MtrunA17_Chr7g0251241 | 93.684 | 380 | 16 | 1 | 1 | 380 | 1 | 372 | 0.0 | 736 |
| Msa1120530 | MtrunA17_Chr1g0209141 | 68.707 | 294 | 82 | 2 | 55 | 348 | 20 | 303 | 2.72e-156 | 442 |
| Msa1120530 | MtrunA17_Chr5g0394161 | 83.206 | 262 | 39 | 2 | 56 | 315 | 2 | 260 | 1.01e-150 | 426 |
| Msa1120530 | MtrunA17_Chr1g0209121 | 67.254 | 284 | 92 | 1 | 58 | 340 | 3 | 286 | 6.84e-136 | 390 |
| Msa1120530 | MtrunA17_Chr3g0105961 | 55.282 | 284 | 126 | 1 | 67 | 349 | 4 | 287 | 2.60e-116 | 339 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120530 | AT3G02600.1 | 65.229 | 371 | 117 | 5 | 9 | 379 | 5 | 363 | 5.16e-175 | 492 |
| Msa1120530 | AT3G02600.2 | 68.222 | 343 | 96 | 5 | 37 | 379 | 3 | 332 | 3.43e-171 | 481 |
| Msa1120530 | AT3G02600.6 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.10 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.7 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.3 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.8 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.4 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.12 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.11 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.9 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT3G02600.5 | 70.807 | 322 | 83 | 4 | 58 | 379 | 3 | 313 | 5.86e-170 | 477 |
| Msa1120530 | AT2G01180.4 | 61.950 | 318 | 116 | 4 | 35 | 349 | 4 | 319 | 2.63e-147 | 420 |
| Msa1120530 | AT2G01180.1 | 61.950 | 318 | 116 | 4 | 35 | 349 | 4 | 319 | 2.63e-147 | 420 |
| Msa1120530 | AT2G01180.8 | 61.950 | 318 | 116 | 4 | 35 | 349 | 4 | 319 | 2.63e-147 | 420 |
| Msa1120530 | AT2G01180.7 | 62.338 | 308 | 112 | 3 | 44 | 349 | 17 | 322 | 4.57e-147 | 419 |
| Msa1120530 | AT2G01180.3 | 62.338 | 308 | 112 | 3 | 44 | 349 | 17 | 322 | 4.57e-147 | 419 |
| Msa1120530 | AT2G01180.6 | 62.338 | 308 | 112 | 3 | 44 | 349 | 4 | 309 | 5.45e-147 | 419 |
| Msa1120530 | AT2G01180.2 | 64.626 | 294 | 100 | 3 | 58 | 349 | 3 | 294 | 2.76e-146 | 416 |
| Msa1120530 | AT2G01180.5 | 64.626 | 294 | 100 | 3 | 58 | 349 | 3 | 294 | 2.76e-146 | 416 |
| Msa1120530 | AT1G15080.1 | 64.931 | 288 | 100 | 1 | 58 | 344 | 3 | 290 | 9.67e-137 | 392 |
| Msa1120530 | AT3G18220.1 | 55.705 | 298 | 131 | 1 | 58 | 354 | 3 | 300 | 1.36e-114 | 336 |
Find 108 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGAGCTTCTGTTAAT+TGG | 0.145398 | 7_3:+70000961 | None:intergenic |
| GGGGTCCTTATGCTTATTTC+AGG | 0.182541 | 7_3:-70001052 | Msa1120530:CDS |
| AACAAAGATGTTGTATAAAA+AGG | 0.242096 | 7_3:-70006386 | Msa1120530:five_prime_UTR |
| TATCACTGCCGTTACTAAAA+TGG | 0.287109 | 7_3:+70002314 | None:intergenic |
| CACTGGACGGACGTGTTTGC+TGG | 0.292931 | 7_3:-70001710 | Msa1120530:CDS |
| GGGTTAACTTTAACAGGAAA+TGG | 0.302168 | 7_3:-70000903 | Msa1120530:CDS |
| TGCATGGGGTTAACTTTAAC+AGG | 0.309244 | 7_3:-70000909 | Msa1120530:CDS |
| TTGTCTATAAGAGACAAATT+TGG | 0.310710 | 7_3:-70000740 | Msa1120530:three_prime_UTR |
| GTGTTTGCTGGAGGTCTTAT+AGG | 0.312795 | 7_3:-70001698 | Msa1120530:intron |
| CTGGGGATCTCTGCTATGAC+TGG | 0.323288 | 7_3:-70004604 | Msa1120530:CDS |
| TTTCTGAGATCTAGGAATTC+AGG | 0.323530 | 7_3:-70002848 | Msa1120530:intron |
| CTACTTGCTGCATCACTTGT+TGG | 0.326071 | 7_3:-70001761 | Msa1120530:CDS |
| GTCTGTGTCCATTCCATTCC+AGG | 0.329039 | 7_3:-70006282 | Msa1120530:intron |
| CTACTTGATAGCTGATTTAG+AGG | 0.334514 | 7_3:-70000685 | Msa1120530:three_prime_UTR |
| CTTCAAACTACTTCTAACTA+TGG | 0.334666 | 7_3:-70006108 | Msa1120530:exon |
| TCATAGTGTGTGCGCCAAGC+TGG | 0.341574 | 7_3:+70002814 | None:intergenic |
| TTAGAAGATGATCTTGAATC+TGG | 0.345661 | 7_3:-70000864 | Msa1120530:CDS |
| CAAGCTCCTAATGCTCAAAA+TGG | 0.345881 | 7_3:-70001002 | Msa1120530:CDS |
| ATATATGCAGGGTCATTTGC+TGG | 0.361065 | 7_3:-70001875 | Msa1120530:intron |
| TGATCTTCATCATGCTGTAT+TGG | 0.367907 | 7_3:-70002455 | Msa1120530:CDS |
| AACTTGAGCTTCTGTTAATT+GGG | 0.374106 | 7_3:+70000962 | None:intergenic |
| GATCTTCATCATGCTGTATT+GGG | 0.375813 | 7_3:-70002454 | Msa1120530:intron |
| GACCTCGACCAGACTTCTTC+TGG | 0.383443 | 7_3:-70002263 | Msa1120530:CDS |
| CATGGTGACTTTGTCCCTCC+TGG | 0.390021 | 7_3:+70000934 | None:intergenic |
| AGAGTAATACAGTTCCTGTC+TGG | 0.394603 | 7_3:-70002641 | Msa1120530:CDS |
| TATCCATTCTATCGCTTTGT+TGG | 0.395127 | 7_3:-70002699 | Msa1120530:CDS |
| AATGCTACATACATGAAGTA+TGG | 0.396744 | 7_3:+70002042 | None:intergenic |
| CTAAAACACATATTCATGAT+TGG | 0.400977 | 7_3:-70002770 | Msa1120530:CDS |
| CTCGGTTGTCACTACTAACT+TGG | 0.402097 | 7_3:-70000775 | Msa1120530:three_prime_UTR |
| TCATCTTCTAATGTTGAAGT+TGG | 0.410419 | 7_3:+70000876 | None:intergenic |
| GATAAATTCTGTATATGTTA+CGG | 0.412908 | 7_3:-70000836 | Msa1120530:exon |
| AAATGGTAATCAAGCACAAT+TGG | 0.419067 | 7_3:-70000985 | Msa1120530:CDS |
| GGATTTATCGAGCCGGAGGC+TGG | 0.419606 | 7_3:-70004623 | Msa1120530:CDS |
| GTCTATCAATGGAAAATTAA+CGG | 0.419642 | 7_3:+70004567 | None:intergenic |
| GCAGGGTCATTTGCTGGTCT+AGG | 0.424510 | 7_3:-70001869 | Msa1120530:intron |
| AGTTGTAACTTCCACTTTGA+CGG | 0.438905 | 7_3:+70000627 | None:intergenic |
| ATCCATTCTATCGCTTTGTT+GGG | 0.441748 | 7_3:-70002698 | Msa1120530:CDS |
| CAAAGTCACCATGGGTGCAT+GGG | 0.441793 | 7_3:-70000924 | Msa1120530:CDS |
| ATACATACATCCTTTCCATC+TGG | 0.450466 | 7_3:+70002231 | None:intergenic |
| GGTTAACTTTAACAGGAAAT+GGG | 0.459120 | 7_3:-70000902 | Msa1120530:CDS |
| TTCCCAACAAAGCGATAGAA+TGG | 0.464974 | 7_3:+70002696 | None:intergenic |
| CATAGTGTGTGCGCCAAGCT+GGG | 0.465906 | 7_3:+70002815 | None:intergenic |
| TACATGAAGTATGGCCGCTT+GGG | 0.467697 | 7_3:+70002051 | None:intergenic |
| ACAAAGTCACCATGGGTGCA+TGG | 0.472421 | 7_3:-70000925 | Msa1120530:CDS |
| GCTGTTGTGTTTACCTGGAA+TGG | 0.472680 | 7_3:+70006269 | None:intergenic |
| GATCATAGATGTCTCTCCTT+CGG | 0.475629 | 7_3:+70002473 | None:intergenic |
| GGCATACCTTCATGATGATA+AGG | 0.477176 | 7_3:+70001518 | None:intergenic |
| CCTCCTCCTTATCATCATGA+AGG | 0.477395 | 7_3:-70001524 | Msa1120530:intron |
| TTATGCTTATTTCAGGATGT+TGG | 0.479824 | 7_3:-70001045 | Msa1120530:CDS |
| AAACATCGCCAGAAGAAGTC+TGG | 0.485111 | 7_3:+70002255 | None:intergenic |
| AAGACGAAAGTAGTAAGAAA+AGG | 0.488544 | 7_3:+70006361 | None:intergenic |
| ATTCTATCGCTTTGTTGGGA+AGG | 0.490451 | 7_3:-70002694 | Msa1120530:CDS |
| AACATCCTGAAATAAGCATA+AGG | 0.499943 | 7_3:+70001047 | None:intergenic |
| TAGTGAGCTGACCTGAAAAC+GGG | 0.503812 | 7_3:+70006037 | None:intergenic |
| GTTGTAACTTCCACTTTGAC+GGG | 0.504716 | 7_3:+70000628 | None:intergenic |
| TGGAATGGACACAGACAGTT+CGG | 0.509440 | 7_3:+70006289 | None:intergenic |
| GTAGTGAGCTGACCTGAAAA+CGG | 0.509526 | 7_3:+70006036 | None:intergenic |
| TGGGGATCTCTGCTATGACT+GGG | 0.511529 | 7_3:-70004603 | Msa1120530:CDS |
| ATACATGAAGTATGGCCGCT+TGG | 0.512014 | 7_3:+70002050 | None:intergenic |
| GATTTATCGAGCCGGAGGCT+GGG | 0.512040 | 7_3:-70004622 | Msa1120530:CDS |
| AACTACTTCTAACTATGGCT+TGG | 0.512182 | 7_3:-70006103 | Msa1120530:exon |
| AGAAGCTCAAGTTGAGAACC+AGG | 0.515071 | 7_3:-70000952 | Msa1120530:CDS |
| GGGGATCTCTGCTATGACTG+GGG | 0.516098 | 7_3:-70004602 | Msa1120530:CDS |
| TACTTCTAACTATGGCTTGG+TGG | 0.516557 | 7_3:-70006100 | Msa1120530:exon |
| TATAGATTGAAAACGAAAGA+AGG | 0.520569 | 7_3:+70006064 | None:intergenic |
| AGGCAGATGGAAGCCCAGCT+TGG | 0.522915 | 7_3:-70002828 | Msa1120530:CDS |
| TAGCAGAGATCCCCAGCCTC+CGG | 0.522972 | 7_3:+70004611 | None:intergenic |
| TTGATGACTACTGGCACCAC+TGG | 0.523537 | 7_3:-70001727 | Msa1120530:CDS |
| TTCTTGTTATTTATATCCGA+AGG | 0.524237 | 7_3:-70002489 | Msa1120530:CDS |
| TGGTGACGAGAGTGTCATAA+AGG | 0.524449 | 7_3:-70002090 | Msa1120530:CDS |
| GATCTAGGAATTCAGGCAGA+TGG | 0.533089 | 7_3:-70002841 | Msa1120530:intron |
| GAGTAATACAGTTCCTGTCT+GGG | 0.535025 | 7_3:-70002640 | Msa1120530:CDS |
| TGTTTGAATAAGCTTATGCT+TGG | 0.547145 | 7_3:+70000539 | None:intergenic |
| TCTCTCGAGTTGATGACTAC+TGG | 0.560824 | 7_3:-70001736 | Msa1120530:CDS |
| TAGAAGATGATCTTGAATCT+GGG | 0.561142 | 7_3:-70000863 | Msa1120530:CDS |
| ATATCGAACGCCCGTCAAAG+TGG | 0.562031 | 7_3:-70000638 | Msa1120530:three_prime_UTR |
| CGCCAGAAGAAGTCTGGTCG+AGG | 0.581407 | 7_3:+70002261 | None:intergenic |
| GATGCAATAAAAGATGCAGT+AGG | 0.581427 | 7_3:-70002288 | Msa1120530:CDS |
| AAGTTAACCCCATGCACCCA+TGG | 0.581980 | 7_3:+70000916 | None:intergenic |
| CTTACAGGAACAGCCCAGAC+AGG | 0.583384 | 7_3:+70002627 | None:intergenic |
| TGACTACTGGCACCACTGGA+CGG | 0.584322 | 7_3:-70001723 | Msa1120530:CDS |
| ATAACAAGAAAGATCACGAT+AGG | 0.584726 | 7_3:+70002502 | None:intergenic |
| GGAACTGTATTACTCTTCAG+TGG | 0.586540 | 7_3:+70002648 | None:intergenic |
| GCACACACTATGAGATCTCA+TGG | 0.591405 | 7_3:-70002804 | Msa1120530:CDS |
| CAGCAAACACGTCCGTCCAG+TGG | 0.591682 | 7_3:+70001711 | None:intergenic |
| CTAAAAGCATTTGATCGCAA+AGG | 0.593115 | 7_3:-70001818 | Msa1120530:CDS |
| AACCGAGTAGAAAACATACT+AGG | 0.593983 | 7_3:+70000791 | None:intergenic |
| CCTTCATGATGATAAGGAGG+AGG | 0.598516 | 7_3:+70001524 | None:intergenic |
| TGTGTTTACCTGGAATGGAA+TGG | 0.599148 | 7_3:+70006274 | None:intergenic |
| GACGAGAGTGTCATAAAGGA+AGG | 0.604424 | 7_3:-70002086 | Msa1120530:CDS |
| TTGGGAGATGTCATTTGTCA+TGG | 0.606969 | 7_3:-70002110 | Msa1120530:CDS |
| ACAAGTGATGCAGCAAGTAG+AGG | 0.607599 | 7_3:+70001764 | None:intergenic |
| ACATGATTTCAATAAATACA+AGG | 0.608273 | 7_3:+70002733 | None:intergenic |
| ATGCAATAAAAGATGCAGTA+GGG | 0.614450 | 7_3:-70002287 | Msa1120530:CDS |
| AAATCACGGTAAAATTGCAT+CGG | 0.617173 | 7_3:-70000591 | Msa1120530:three_prime_UTR |
| AAAGTCACCATGGGTGCATG+GGG | 0.620064 | 7_3:-70000923 | Msa1120530:CDS |
| TTACCTAGGATTTATCGAGC+CGG | 0.624374 | 7_3:-70004630 | Msa1120530:intron |
| CCTAGGATTTATCGAGCCGG+AGG | 0.627973 | 7_3:-70004627 | Msa1120530:intron |
| TGGACGGACGTGTTTGCTGG+AGG | 0.637391 | 7_3:-70001707 | Msa1120530:CDS |
| CAGGAGGGACAAAGTCACCA+TGG | 0.646229 | 7_3:-70000933 | Msa1120530:CDS |
| AGGAGGGACAAAGTCACCAT+GGG | 0.651663 | 7_3:-70000932 | Msa1120530:CDS |
| ATACCTTCATGATGATAAGG+AGG | 0.657232 | 7_3:+70001521 | None:intergenic |
| GCTCAAGTTGAGAACCAGGA+GGG | 0.662360 | 7_3:-70000948 | Msa1120530:CDS |
| GCTATCAAGTAGATCAACAG+AGG | 0.688830 | 7_3:+70000696 | None:intergenic |
| TGAGCTGACCTGAAAACGGG+TGG | 0.695241 | 7_3:+70006040 | None:intergenic |
| AGGATGTTGGAAGAAACTAG+AGG | 0.720006 | 7_3:-70001032 | Msa1120530:CDS |
| AGCTCAAGTTGAGAACCAGG+AGG | 0.720823 | 7_3:-70000949 | Msa1120530:CDS |
| GGACATAAGAGTTTCCCAAG+CGG | 0.755590 | 7_3:-70002065 | Msa1120530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATAGTTAAAATAAAA+GGG | + | chr7_3:70000665-70000684 | None:intergenic | 10.0% |
| !! | AAAAGAATAGTTAAAATAAA+AGG | + | chr7_3:70000666-70000685 | None:intergenic | 10.0% |
| !! | ATATTAGTTAAATATTAGTT+AGG | - | chr7_3:70003705-70003724 | Msa1120530:intron | 10.0% |
| !! | TATTAGTTAAATATTAGTTA+GGG | - | chr7_3:70003706-70003725 | Msa1120530:intron | 10.0% |
| !! | ATATATGTATTACATAATAA+TGG | - | chr7_3:70005557-70005576 | Msa1120530:intron | 10.0% |
| !! | TATATGTATTACATAATAAT+GGG | - | chr7_3:70005558-70005577 | Msa1120530:intron | 10.0% |
| !! | TTATATACCAATAATATAGA+GGG | + | chr7_3:70000620-70000639 | None:intergenic | 15.0% |
| !! | TTTATATACCAATAATATAG+AGG | + | chr7_3:70000621-70000640 | None:intergenic | 15.0% |
| !!! | TATTTTAACTATTCTTTTTC+AGG | - | chr7_3:70000668-70000687 | Msa1120530:three_prime_UTR | 15.0% |
| !! | ACTAGATTTATGTATATTTA+TGG | - | chr7_3:70001041-70001060 | Msa1120530:CDS | 15.0% |
| !! | CTAGATTTATGTATATTTAT+GGG | - | chr7_3:70001042-70001061 | Msa1120530:CDS | 15.0% |
| !!! | ATATTAAATTTTTGTTGAAC+CGG | + | chr7_3:70001173-70001192 | None:intergenic | 15.0% |
| !!! | TTTTAAAAGACACTTATTTT+GGG | + | chr7_3:70003551-70003570 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAGACACTTATTT+TGG | + | chr7_3:70003552-70003571 | None:intergenic | 15.0% |
| !! | ATTAGTTAAATATTAGTTAG+GGG | - | chr7_3:70003707-70003726 | Msa1120530:intron | 15.0% |
| !!! | TTTTTAGGTTTATGATAAAT+TGG | - | chr7_3:70004708-70004727 | Msa1120530:intron | 15.0% |
| !!! | TTTTAGGTTTATGATAAATT+GGG | - | chr7_3:70004709-70004728 | Msa1120530:intron | 15.0% |
| !!! | AAAAGTAGTTTTTCTATTTT+TGG | + | chr7_3:70005213-70005232 | None:intergenic | 15.0% |
| !! | ATATGTATTACATAATAATG+GGG | - | chr7_3:70005559-70005578 | Msa1120530:intron | 15.0% |
| !!! | TGTTTTTTTTCTTCTTCTTT+GGG | + | chr7_3:70000435-70000454 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTCTTCTTCTT+TGG | + | chr7_3:70000436-70000455 | None:intergenic | 20.0% |
| !! | AACAAAGATGTTGTATAAAA+AGG | - | chr7_3:70000451-70000470 | Msa1120530:three_prime_UTR | 20.0% |
| !! | TCAACAAAAATTTAATATCG+AGG | - | chr7_3:70001175-70001194 | Msa1120530:intron | 20.0% |
| !! | TATCTATATCTAGTTGAAAA+AGG | - | chr7_3:70001258-70001277 | Msa1120530:intron | 20.0% |
| !! | CACTATCCTAAAAAAAAAAA+AGG | + | chr7_3:70001790-70001809 | None:intergenic | 20.0% |
| !! | AAATCTGAACTCTATTTATT+CGG | + | chr7_3:70002034-70002053 | None:intergenic | 20.0% |
| !! | AATAATATGCAAATAGAAAC+TGG | + | chr7_3:70002070-70002089 | None:intergenic | 20.0% |
| !! | AAATAATTCAGTGTAATTAC+AGG | - | chr7_3:70002449-70002468 | Msa1120530:intron | 20.0% |
| !! | TCTTATTCATAAACGAATAT+TGG | + | chr7_3:70002628-70002647 | None:intergenic | 20.0% |
| !! | TTATATTGAAATGATGAACA+TGG | - | chr7_3:70003116-70003135 | Msa1120530:intron | 20.0% |
| !! | ATTGGAGATTGAAATTTAAA+AGG | - | chr7_3:70003144-70003163 | Msa1120530:intron | 20.0% |
| !! | AACTAAGGAAATGATATAAA+TGG | + | chr7_3:70003514-70003533 | None:intergenic | 20.0% |
| !! | TTAGTTAAATATTAGTTAGG+GGG | - | chr7_3:70003708-70003727 | Msa1120530:intron | 20.0% |
| !! | ACATGATTTCAATAAATACA+AGG | + | chr7_3:70004107-70004126 | None:intergenic | 20.0% |
| !!! | AAGAATTTATTTTCTGGTAT+AGG | - | chr7_3:70004489-70004508 | Msa1120530:intron | 20.0% |
| !!! | ATTGTTAATGACTTCTTTTT+AGG | - | chr7_3:70004693-70004712 | Msa1120530:intron | 20.0% |
| !! | AATTCCAATTTATATATGCA+GGG | - | chr7_3:70004951-70004970 | Msa1120530:intron | 20.0% |
| !! | GATAATATTGCATAATGTAT+TGG | - | chr7_3:70005358-70005377 | Msa1120530:intron | 20.0% |
| !! | AGAAATAAGAACTATAGATA+TGG | - | chr7_3:70005582-70005601 | Msa1120530:intron | 20.0% |
| !! | TTCATATTTGACATAATTCA+TGG | - | chr7_3:70005605-70005624 | Msa1120530:intron | 20.0% |
| !! | GATAAATTCTGTATATGTTA+CGG | - | chr7_3:70006001-70006020 | Msa1120530:intron | 20.0% |
| !!! | ATTTTGAAGCTGATAATTTT+AGG | - | chr7_3:70006369-70006388 | Msa1120530:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTCTTCTTCTTTGG+GGG | + | chr7_3:70000433-70000452 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTCTTCTTCTTTG+GGG | + | chr7_3:70000434-70000453 | None:intergenic | 25.0% |
| !! | CATCTTCAATCTCTTTTTAA+TGG | - | chr7_3:70000694-70000713 | Msa1120530:three_prime_UTR | 25.0% |
| ! | TATAGATTGAAAACGAAAGA+AGG | + | chr7_3:70000776-70000795 | None:intergenic | 25.0% |
| ! | CAACTAGATATAGATATTGT+CGG | + | chr7_3:70001254-70001273 | None:intergenic | 25.0% |
| ! | GTTAATATAAACATGCATCA+TGG | + | chr7_3:70001373-70001392 | None:intergenic | 25.0% |
| ! | AACTAAATATTGCCAGAAAA+AGG | + | chr7_3:70001536-70001555 | None:intergenic | 25.0% |
| ! | TAACTTAAATTTCTCCTATC+CGG | + | chr7_3:70001623-70001642 | None:intergenic | 25.0% |
| ! | TGATTAATGAATTCTTACCT+TGG | - | chr7_3:70001706-70001725 | Msa1120530:CDS | 25.0% |
| !!! | GGTTGACCTTTTTTTTTTTT+AGG | - | chr7_3:70001781-70001800 | Msa1120530:CDS | 25.0% |
| !! | CTTCGTATTATCATTTTCTA+TGG | - | chr7_3:70001811-70001830 | Msa1120530:CDS | 25.0% |
| ! | TTAATCTTCAAAGTTAAGCT+AGG | + | chr7_3:70001875-70001894 | None:intergenic | 25.0% |
| !!! | TCAATTTTTGATGATTTTCC+TGG | - | chr7_3:70001910-70001929 | Msa1120530:intron | 25.0% |
| ! | CATATTAAAGTTGAACAAAG+CGG | + | chr7_3:70002093-70002112 | None:intergenic | 25.0% |
| ! | GTCTATCAATGGAAAATTAA+CGG | + | chr7_3:70002273-70002292 | None:intergenic | 25.0% |
| !!! | TCATTTTTTGTGTCTATCAA+TGG | + | chr7_3:70002284-70002303 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr7_3:70002424-70002443 | None:intergenic | 25.0% |
| ! | AATACTAGAAACAGGTTATA+GGG | + | chr7_3:70002564-70002583 | None:intergenic | 25.0% |
| ! | AAATACTAGAAACAGGTTAT+AGG | + | chr7_3:70002565-70002584 | None:intergenic | 25.0% |
| ! | TTTGAGAAAATACTAGAAAC+AGG | + | chr7_3:70002572-70002591 | None:intergenic | 25.0% |
| !!! | TTTCTAGTATTTTCTCAAAG+AGG | - | chr7_3:70002573-70002592 | Msa1120530:intron | 25.0% |
| ! | ATGTTTCATATACTGATAGA+AGG | + | chr7_3:70002962-70002981 | None:intergenic | 25.0% |
| ! | TCTAGCAAAATCTGAATTAT+TGG | + | chr7_3:70003053-70003072 | None:intergenic | 25.0% |
| ! | TGCTGAATAGAAATTAACAA+TGG | - | chr7_3:70003232-70003251 | Msa1120530:intron | 25.0% |
| ! | TTTCTATATATTCAAGAGGT+GGG | + | chr7_3:70003386-70003405 | None:intergenic | 25.0% |
| ! | ATTTCTATATATTCAAGAGG+TGG | + | chr7_3:70003387-70003406 | None:intergenic | 25.0% |
| ! | GTCATTTCTATATATTCAAG+AGG | + | chr7_3:70003390-70003409 | None:intergenic | 25.0% |
| ! | GGAAATGATATAAATGGTTA+TGG | + | chr7_3:70003508-70003527 | None:intergenic | 25.0% |
| ! | ATTGATAAAAACCAAGCTAA+CGG | + | chr7_3:70003637-70003656 | None:intergenic | 25.0% |
| !! | TGTTAAAGTGACACTTATTT+TGG | - | chr7_3:70003803-70003822 | Msa1120530:intron | 25.0% |
| ! | ATGAACTCTGTAATTAATGT+AGG | - | chr7_3:70003882-70003901 | Msa1120530:intron | 25.0% |
| ! | AAATAGTGAAATAAGTTTGG+TGG | + | chr7_3:70003945-70003964 | None:intergenic | 25.0% |
| ! | TGGAAATAGTGAAATAAGTT+TGG | + | chr7_3:70003948-70003967 | None:intergenic | 25.0% |
| ! | AAACTTATTTCACTATTTCC+AGG | - | chr7_3:70003947-70003966 | Msa1120530:intron | 25.0% |
| ! | CTAAAACACATATTCATGAT+TGG | - | chr7_3:70004067-70004086 | Msa1120530:intron | 25.0% |
| ! | CAATGTTAGAGTAATTATTC+AGG | + | chr7_3:70004277-70004296 | None:intergenic | 25.0% |
| !! | AACATTGTCTTTTACTATCA+TGG | - | chr7_3:70004290-70004309 | Msa1120530:intron | 25.0% |
| !!! | TTCTTGTTATTTATATCCGA+AGG | - | chr7_3:70004348-70004367 | Msa1120530:intron | 25.0% |
| !!! | GATGACAAGAATTTATTTTC+TGG | - | chr7_3:70004483-70004502 | Msa1120530:intron | 25.0% |
| ! | AACTAAAAACCTAAAATTCG+AGG | + | chr7_3:70004633-70004652 | None:intergenic | 25.0% |
| !! | TGTTTGTTTGATAGATTTTC+TGG | - | chr7_3:70004655-70004674 | Msa1120530:intron | 25.0% |
| ! | TAATTAAGTTTCACGAGAAA+TGG | - | chr7_3:70004858-70004877 | Msa1120530:intron | 25.0% |
| ! | CAATTCCAATTTATATATGC+AGG | - | chr7_3:70004950-70004969 | Msa1120530:intron | 25.0% |
| !! | TTTTTATCATTGTACTTAGC+TGG | - | chr7_3:70004992-70005011 | Msa1120530:intron | 25.0% |
| !!! | AAACTACTTTTAGTGTTTGT+TGG | - | chr7_3:70005222-70005241 | Msa1120530:intron | 25.0% |
| !! | TAGAAAAAAGGTGTATAATG+AGG | + | chr7_3:70005456-70005475 | None:intergenic | 25.0% |
| !!! | ATTATACACCTTTTTTCTAG+AGG | - | chr7_3:70005457-70005476 | Msa1120530:intron | 25.0% |
| !!! | CAACTTGGTAATTTTTTTAC+AGG | + | chr7_3:70005680-70005699 | None:intergenic | 25.0% |
| ! | CAGAATTAAATTCATCAACT+TGG | + | chr7_3:70005695-70005714 | None:intergenic | 25.0% |
| !! | TTTAATTCTGTTCTGAACTA+TGG | - | chr7_3:70005705-70005724 | Msa1120530:intron | 25.0% |
| ! | ATATTATCTACAACATCAGA+TGG | + | chr7_3:70005745-70005764 | None:intergenic | 25.0% |
| !! | AATATATTGTTATTCTCTGC+AGG | - | chr7_3:70005760-70005779 | Msa1120530:intron | 25.0% |
| ! | TTGTCTATAAGAGACAAATT+TGG | - | chr7_3:70006097-70006116 | Msa1120530:exon | 25.0% |
| !!! | ATTTTAGGTGAATTGGATTT+TGG | - | chr7_3:70006384-70006403 | Msa1120530:five_prime_UTR | 25.0% |
| AAGACGAAAGTAGTAAGAAA+AGG | + | chr7_3:70000479-70000498 | None:intergenic | 30.0% | |
| GATTGAATCATACGAAAAAC+AGG | - | chr7_3:70000506-70000525 | Msa1120530:three_prime_UTR | 30.0% | |
| ATACCAATAATATAGAGGGA+GGG | + | chr7_3:70000616-70000635 | None:intergenic | 30.0% | |
| TATACCAATAATATAGAGGG+AGG | + | chr7_3:70000617-70000636 | None:intergenic | 30.0% | |
| CTTCAAACTACTTCTAACTA+TGG | - | chr7_3:70000729-70000748 | Msa1120530:three_prime_UTR | 30.0% | |
| ! | GAAAGTATAGAAATGCATAG+AGG | + | chr7_3:70000847-70000866 | None:intergenic | 30.0% |
| ATTACTAGTAAACAGTACCA+AGG | - | chr7_3:70001068-70001087 | Msa1120530:intron | 30.0% | |
| TAAACAGTACCAAGGAAAAT+AGG | - | chr7_3:70001076-70001095 | Msa1120530:intron | 30.0% | |
| AAACAGTACCAAGGAAAATA+GGG | - | chr7_3:70001077-70001096 | Msa1120530:intron | 30.0% | |
| !! | GCTTATCAATCTCTAAAACA+TGG | + | chr7_3:70001415-70001434 | None:intergenic | 30.0% |
| ! | GGAGAAATTTAAGTTAATGC+AGG | - | chr7_3:70001627-70001646 | Msa1120530:intron | 30.0% |
| TCACAATTCTCACAAAATGA+TGG | + | chr7_3:70001756-70001775 | None:intergenic | 30.0% | |
| TTTGTGAGAATTGTGATTCA+TGG | - | chr7_3:70001760-70001779 | Msa1120530:CDS | 30.0% | |
| ! | CATTTTCTATGGATATAAGC+AGG | - | chr7_3:70001822-70001841 | Msa1120530:CDS | 30.0% |
| CTCATGCTCGTAAATTTAAT+TGG | - | chr7_3:70001933-70001952 | Msa1120530:intron | 30.0% | |
| TAAGATAAGCAAAGCAAATC+AGG | - | chr7_3:70002154-70002173 | Msa1120530:intron | 30.0% | |
| AAGATAAGCAAAGCAAATCA+GGG | - | chr7_3:70002155-70002174 | Msa1120530:intron | 30.0% | |
| GATAGACACAAAAAATGAAG+AGG | - | chr7_3:70002286-70002305 | Msa1120530:CDS | 30.0% | |
| TATACAGACATATGAGAACA+CGG | + | chr7_3:70002651-70002670 | None:intergenic | 30.0% | |
| TTTAAAGATGAAAGTCCACT+AGG | + | chr7_3:70002877-70002896 | None:intergenic | 30.0% | |
| CTCTAATTCACATAGTTTGA+CGG | - | chr7_3:70002905-70002924 | Msa1120530:intron | 30.0% | |
| GTATATGAAACATGTCTACA+AGG | - | chr7_3:70002969-70002988 | Msa1120530:intron | 30.0% | |
| CATCCTAACTCTTTACAAAA+TGG | - | chr7_3:70003259-70003278 | Msa1120530:intron | 30.0% | |
| ! | TCACCATTTTGTAAAGAGTT+AGG | + | chr7_3:70003265-70003284 | None:intergenic | 30.0% |
| !!! | AAAAGACACTTATTTTGGGA+CGG | + | chr7_3:70003547-70003566 | None:intergenic | 30.0% |
| TTGATAAAAACCAAGCTAAC+GGG | + | chr7_3:70003636-70003655 | None:intergenic | 30.0% | |
| ATCTTAATCAGCAAACTTAC+AGG | + | chr7_3:70004228-70004247 | None:intergenic | 30.0% | |
| ATAACAAGAAAGATCACGAT+AGG | + | chr7_3:70004338-70004357 | None:intergenic | 30.0% | |
| ! | ACAAACTCTATTTGCTAAAC+TGG | - | chr7_3:70004447-70004466 | Msa1120530:intron | 30.0% |
| ATTCTTGTCATCCACTTTAA+CGG | + | chr7_3:70004475-70004494 | None:intergenic | 30.0% | |
| !! | ACTGTTCTCCATTTTAGTAA+CGG | - | chr7_3:70004515-70004534 | Msa1120530:intron | 30.0% |
| ATGCAATAAAAGATGCAGTA+GGG | - | chr7_3:70004550-70004569 | Msa1120530:intron | 30.0% | |
| ! | GTATGTATTCCTCGAATTTT+AGG | - | chr7_3:70004621-70004640 | Msa1120530:CDS | 30.0% |
| !! | TTGATAGATTTTCTGGTCAA+AGG | - | chr7_3:70004662-70004681 | Msa1120530:intron | 30.0% |
| AATGCTACATACATGAAGTA+TGG | + | chr7_3:70004798-70004817 | None:intergenic | 30.0% | |
| TAGCATTTACTACTTATGAC+TGG | - | chr7_3:70004811-70004830 | Msa1120530:intron | 30.0% | |
| ATTACACTAAGTTATGAGCA+TGG | + | chr7_3:70004842-70004861 | None:intergenic | 30.0% | |
| ATGACCCTGCATATATAAAT+TGG | + | chr7_3:70004958-70004977 | None:intergenic | 30.0% | |
| ACTAATTGAGATGCGATAAA+TGG | + | chr7_3:70005170-70005189 | None:intergenic | 30.0% | |
| TATGTGAGATTTCTTCTTTC+AGG | - | chr7_3:70005253-70005272 | Msa1120530:intron | 30.0% | |
| !!! | ATTGGTTTTGAAATAGTGTC+AGG | + | chr7_3:70005491-70005510 | None:intergenic | 30.0% |
| TATGTATCTAGGTATGCAAT+TGG | + | chr7_3:70005509-70005528 | None:intergenic | 30.0% | |
| ATTGCATACCTAGATACATA+CGG | - | chr7_3:70005509-70005528 | Msa1120530:intron | 30.0% | |
| AACATCCTGAAATAAGCATA+AGG | + | chr7_3:70005793-70005812 | None:intergenic | 30.0% | |
| TTATGCTTATTTCAGGATGT+TGG | - | chr7_3:70005792-70005811 | Msa1120530:intron | 30.0% | |
| ! | TGATTACCATTTTGAGCATT+AGG | + | chr7_3:70005844-70005863 | None:intergenic | 30.0% |
| AAATGGTAATCAAGCACAAT+TGG | - | chr7_3:70005852-70005871 | Msa1120530:intron | 30.0% | |
| AACTTGAGCTTCTGTTAATT+GGG | + | chr7_3:70005878-70005897 | None:intergenic | 30.0% | |
| GGTTAACTTTAACAGGAAAT+GGG | - | chr7_3:70005935-70005954 | Msa1120530:intron | 30.0% | |
| TCATCTTCTAATGTTGAAGT+TGG | + | chr7_3:70005964-70005983 | None:intergenic | 30.0% | |
| TTAGAAGATGATCTTGAATC+TGG | - | chr7_3:70005973-70005992 | Msa1120530:intron | 30.0% | |
| TAGAAGATGATCTTGAATCT+GGG | - | chr7_3:70005974-70005993 | Msa1120530:intron | 30.0% | |
| ! | ATCCTAGTATGTTTTCTACT+CGG | - | chr7_3:70006044-70006063 | Msa1120530:intron | 30.0% |
| ! | TTGTAGCTTTTGTCAAATCA+CGG | - | chr7_3:70006232-70006251 | Msa1120530:intron | 30.0% |
| AAATCACGGTAAAATTGCAT+CGG | - | chr7_3:70006246-70006265 | Msa1120530:intron | 30.0% | |
| TGTTTGAATAAGCTTATGCT+TGG | + | chr7_3:70006301-70006320 | None:intergenic | 30.0% | |
| !! | GCTGATAATTTTAGGTGAAT+TGG | - | chr7_3:70006377-70006396 | Msa1120530:five_prime_UTR | 30.0% |
| AACTACTTCTAACTATGGCT+TGG | - | chr7_3:70000734-70000753 | Msa1120530:three_prime_UTR | 35.0% | |
| TAGAAATGCATAGAGGTGAA+GGG | + | chr7_3:70000840-70000859 | None:intergenic | 35.0% | |
| ATAGAAATGCATAGAGGTGA+AGG | + | chr7_3:70000841-70000860 | None:intergenic | 35.0% | |
| TAAATGCGAACAACTCTGTA+AGG | + | chr7_3:70001119-70001138 | None:intergenic | 35.0% | |
| ! | TATAGATATTGTCGGCTACA+TGG | + | chr7_3:70001246-70001265 | None:intergenic | 35.0% |
| AAGGCTTGAATGATTGATTG+TGG | - | chr7_3:70001277-70001296 | Msa1120530:intron | 35.0% | |
| !! | CTCTAAAACATGGTTCAACA+CGG | + | chr7_3:70001405-70001424 | None:intergenic | 35.0% |
| CAGAAGAGTTTATAAGTCCA+AGG | + | chr7_3:70001726-70001745 | None:intergenic | 35.0% | |
| CTAGGCAATCAATCAGATTA+AGG | + | chr7_3:70001857-70001876 | None:intergenic | 35.0% | |
| TGCTCTTTACATATTTGCGA+TGG | - | chr7_3:70001965-70001984 | Msa1120530:intron | 35.0% | |
| !! | CTTGTTTTCAACGACACAAA+GGG | + | chr7_3:70002119-70002138 | None:intergenic | 35.0% |
| !!! | TCTTGTTTTCAACGACACAA+AGG | + | chr7_3:70002120-70002139 | None:intergenic | 35.0% |
| !!! | CACGAAAGTGCTTTTTTTTG+AGG | - | chr7_3:70002184-70002203 | Msa1120530:intron | 35.0% |
| !!! | GCTTTTTTTTGAGGTTACCT+AGG | - | chr7_3:70002193-70002212 | Msa1120530:intron | 35.0% |
| TGAGTATAACCTATGAAGCA+CGG | - | chr7_3:70002357-70002376 | Msa1120530:intron | 35.0% | |
| TTCAGTGTAATTACAGGTGT+CGG | - | chr7_3:70002455-70002474 | Msa1120530:CDS | 35.0% | |
| ! | TTTTCTCAAAGAGGTAGTTG+TGG | - | chr7_3:70002582-70002601 | Msa1120530:intron | 35.0% |
| AAGCAGTATAGAGAAGAGAT+TGG | + | chr7_3:70002688-70002707 | None:intergenic | 35.0% | |
| TTCTCTATACTGCTTTCTGT+TGG | - | chr7_3:70002693-70002712 | Msa1120530:CDS | 35.0% | |
| TTGATCCTTGCTAGAAAGAT+AGG | - | chr7_3:70002755-70002774 | Msa1120530:CDS | 35.0% | |
| ! | TAAGTCCTATCTTTCTAGCA+AGG | + | chr7_3:70002763-70002782 | None:intergenic | 35.0% |
| ATGATGAACATGGTGCTTAT+TGG | - | chr7_3:70003126-70003145 | Msa1120530:intron | 35.0% | |
| ATCTGAGTTAAAACAGCTAG+AGG | - | chr7_3:70003190-70003209 | Msa1120530:intron | 35.0% | |
| CAATGATAAACCTCCTAGAA+AGG | - | chr7_3:70003291-70003310 | Msa1120530:intron | 35.0% | |
| ! | AAGTCTGAAAAAAAGGTGCA+GGG | + | chr7_3:70003319-70003338 | None:intergenic | 35.0% |
| ! | AAAGTCTGAAAAAAAGGTGC+AGG | + | chr7_3:70003320-70003339 | None:intergenic | 35.0% |
| GTTGGGAAAGTCTGAAAAAA+AGG | + | chr7_3:70003326-70003345 | None:intergenic | 35.0% | |
| ! | AGAGAATGGCATTTTATGAG+TGG | + | chr7_3:70003426-70003445 | None:intergenic | 35.0% |
| ! | ATTCTGATTTTGCGACAGAT+TGG | + | chr7_3:70003484-70003503 | None:intergenic | 35.0% |
| TGATAAAAACCAAGCTAACG+GGG | + | chr7_3:70003635-70003654 | None:intergenic | 35.0% | |
| !!! | GTGACACTTATTTTGGAAGT+TGG | - | chr7_3:70003810-70003829 | Msa1120530:intron | 35.0% |
| !! | TTTCTGAGATCTAGGAATTC+AGG | - | chr7_3:70003989-70004008 | Msa1120530:intron | 35.0% |
| TATCCATTCTATCGCTTTGT+TGG | - | chr7_3:70004138-70004157 | Msa1120530:intron | 35.0% | |
| ! | ATCCATTCTATCGCTTTGTT+GGG | - | chr7_3:70004139-70004158 | Msa1120530:intron | 35.0% |
| TGATCTTCATCATGCTGTAT+TGG | - | chr7_3:70004382-70004401 | Msa1120530:intron | 35.0% | |
| GATCTTCATCATGCTGTATT+GGG | - | chr7_3:70004383-70004402 | Msa1120530:intron | 35.0% | |
| TATCACTGCCGTTACTAAAA+TGG | + | chr7_3:70004526-70004545 | None:intergenic | 35.0% | |
| GATGCAATAAAAGATGCAGT+AGG | - | chr7_3:70004549-70004568 | Msa1120530:intron | 35.0% | |
| ATACATACATCCTTTCCATC+TGG | + | chr7_3:70004609-70004628 | None:intergenic | 35.0% | |
| TAAGTTTCACGAGAAATGGA+TGG | - | chr7_3:70004862-70004881 | Msa1120530:intron | 35.0% | |
| !! | CTAAAAGCATTTGATCGCAA+AGG | - | chr7_3:70005019-70005038 | Msa1120530:intron | 35.0% |
| ATACCTTCATGATGATAAGG+AGG | + | chr7_3:70005319-70005338 | None:intergenic | 35.0% | |
| TTATCTAAGAGAATCTGCAG+AGG | + | chr7_3:70005343-70005362 | None:intergenic | 35.0% | |
| AGGTTCAAAGCAGATGTAAA+TGG | + | chr7_3:70005429-70005448 | None:intergenic | 35.0% | |
| AAGGTGTATAATGAGGTGAA+AGG | + | chr7_3:70005449-70005468 | None:intergenic | 35.0% | |
| !!! | CACCTTTTTTCTAGAGGTTT+TGG | - | chr7_3:70005463-70005482 | Msa1120530:intron | 35.0% |
| ! | AGCCAAAACCTCTAGAAAAA+AGG | + | chr7_3:70005468-70005487 | None:intergenic | 35.0% |
| TTGCATACCTAGATACATAC+GGG | - | chr7_3:70005510-70005529 | Msa1120530:intron | 35.0% | |
| ! | TATTGTTATTCTCTGCAGGT+TGG | - | chr7_3:70005764-70005783 | Msa1120530:intron | 35.0% |
| ! | ATTGTTATTCTCTGCAGGTT+GGG | - | chr7_3:70005765-70005784 | Msa1120530:intron | 35.0% |
| CAACTTGAGCTTCTGTTAAT+TGG | + | chr7_3:70005879-70005898 | None:intergenic | 35.0% | |
| GGGTTAACTTTAACAGGAAA+TGG | - | chr7_3:70005934-70005953 | Msa1120530:intron | 35.0% | |
| AACCGAGTAGAAAACATACT+AGG | + | chr7_3:70006049-70006068 | None:intergenic | 35.0% | |
| ! | CTACTTGATAGCTGATTTAG+AGG | - | chr7_3:70006152-70006171 | Msa1120530:intron | 35.0% |
| AGTTGTAACTTCCACTTTGA+CGG | + | chr7_3:70006213-70006232 | None:intergenic | 35.0% | |
| TGTGTTTACCTGGAATGGAA+TGG | + | chr7_3:70000566-70000585 | None:intergenic | 40.0% | |
| CAATAATATAGAGGGAGGGA+GGG | + | chr7_3:70000612-70000631 | None:intergenic | 40.0% | |
| ! | TACTTCTAACTATGGCTTGG+TGG | - | chr7_3:70000737-70000756 | Msa1120530:three_prime_UTR | 40.0% |
| ! | ATCTATAACCACCCGTTTTC+AGG | - | chr7_3:70000789-70000808 | Msa1120530:three_prime_UTR | 40.0% |
| ! | GCTCAATATGGACTAATCCA+CGG | + | chr7_3:70000937-70000956 | None:intergenic | 40.0% |
| AAGCAGAGCAAAGCTCAATA+TGG | + | chr7_3:70000949-70000968 | None:intergenic | 40.0% | |
| ATATCCGACAACTAATCCTG+AGG | + | chr7_3:70001007-70001026 | None:intergenic | 40.0% | |
| ! | TTCTGCTACCCTATTTTCCT+TGG | + | chr7_3:70001088-70001107 | None:intergenic | 40.0% |
| AATCTGGTTGGGATAGTAGT+CGG | + | chr7_3:70001146-70001165 | None:intergenic | 40.0% | |
| TATCCCAACCAGATTAACTC+CGG | - | chr7_3:70001151-70001170 | Msa1120530:intron | 40.0% | |
| TTGTTGAACCGGAGTTAATC+TGG | + | chr7_3:70001162-70001181 | None:intergenic | 40.0% | |
| ! | GCACAAAGTTGTCCTTTTTC+TGG | - | chr7_3:70001521-70001540 | Msa1120530:intron | 40.0% |
| ACCATAGCAGAACGAACTAA+AGG | + | chr7_3:70001600-70001619 | None:intergenic | 40.0% | |
| TAAATTTACGAGCATGAGCC+AGG | + | chr7_3:70001931-70001950 | None:intergenic | 40.0% | |
| GCATACATGGACAAATATGC+TGG | - | chr7_3:70002000-70002019 | Msa1120530:intron | 40.0% | |
| TTACCTAGGATTTATCGAGC+CGG | - | chr7_3:70002207-70002226 | Msa1120530:intron | 40.0% | |
| TAACCTATGAAGCACGGATA+CGG | - | chr7_3:70002363-70002382 | Msa1120530:intron | 40.0% | |
| GGGTTATACTCTATGAAGCA+CGG | + | chr7_3:70002544-70002563 | None:intergenic | 40.0% | |
| AGCAAGGATCAATTACAAGC+TGG | + | chr7_3:70002747-70002766 | None:intergenic | 40.0% | |
| ATGAAAGTCCACTAGGAAAC+TGG | + | chr7_3:70002870-70002889 | None:intergenic | 40.0% | |
| GAGGATATCTTCTCTGCTAA+TGG | - | chr7_3:70003209-70003228 | Msa1120530:intron | 40.0% | |
| TCAGACTTTCCCAACCAAAA+AGG | - | chr7_3:70003331-70003350 | Msa1120530:intron | 40.0% | |
| ! | GCATTTTATGAGTGGAGAGA+AGG | + | chr7_3:70003418-70003437 | None:intergenic | 40.0% |
| ! | GATAGGGGCATAAAAGAGAA+TGG | + | chr7_3:70003440-70003459 | None:intergenic | 40.0% |
| GATAAAAACCAAGCTAACGG+GGG | + | chr7_3:70003634-70003653 | None:intergenic | 40.0% | |
| !!! | CTGTGGTTTTTCTGAGATCT+AGG | - | chr7_3:70003981-70004000 | Msa1120530:intron | 40.0% |
| TTCCCAACAAAGCGATAGAA+TGG | + | chr7_3:70004144-70004163 | None:intergenic | 40.0% | |
| ! | ATTCTATCGCTTTGTTGGGA+AGG | - | chr7_3:70004143-70004162 | Msa1120530:intron | 40.0% |
| GGAACTGTATTACTCTTCAG+TGG | + | chr7_3:70004192-70004211 | None:intergenic | 40.0% | |
| AGAGTAATACAGTTCCTGTC+TGG | - | chr7_3:70004196-70004215 | Msa1120530:intron | 40.0% | |
| GAGTAATACAGTTCCTGTCT+GGG | - | chr7_3:70004197-70004216 | Msa1120530:intron | 40.0% | |
| GATCATAGATGTCTCTCCTT+CGG | + | chr7_3:70004367-70004386 | None:intergenic | 40.0% | |
| CTAAACTGGAACCGTTAAAG+TGG | - | chr7_3:70004461-70004480 | Msa1120530:intron | 40.0% | |
| ! | TTGGGAGATGTCATTTGTCA+TGG | - | chr7_3:70004727-70004746 | Msa1120530:intron | 40.0% |
| ATATATGCAGGGTCATTTGC+TGG | - | chr7_3:70004962-70004981 | Msa1120530:intron | 40.0% | |
| GGCATACCTTCATGATGATA+AGG | + | chr7_3:70005322-70005341 | None:intergenic | 40.0% | |
| AATGTCTCCCGTATGTATCT+AGG | + | chr7_3:70005520-70005539 | None:intergenic | 40.0% | |
| ! | TTGTTATTCTCTGCAGGTTG+GGG | - | chr7_3:70005766-70005785 | Msa1120530:intron | 40.0% |
| AGGATGTTGGAAGAAACTAG+AGG | - | chr7_3:70005805-70005824 | Msa1120530:intron | 40.0% | |
| CAAGCTCCTAATGCTCAAAA+TGG | - | chr7_3:70005835-70005854 | Msa1120530:intron | 40.0% | |
| TGCATGGGGTTAACTTTAAC+AGG | - | chr7_3:70005928-70005947 | Msa1120530:intron | 40.0% | |
| GCTATCAAGTAGATCAACAG+AGG | + | chr7_3:70006144-70006163 | None:intergenic | 40.0% | |
| !! | GAGGCTGTTTGTTTTCATGA+TGG | - | chr7_3:70006171-70006190 | Msa1120530:intron | 40.0% |
| GTTGTAACTTCCACTTTGAC+GGG | + | chr7_3:70006212-70006231 | None:intergenic | 40.0% | |
| TGGAATGGACACAGACAGTT+CGG | + | chr7_3:70000551-70000570 | None:intergenic | 45.0% | |
| GCTGTTGTGTTTACCTGGAA+TGG | + | chr7_3:70000571-70000590 | None:intergenic | 45.0% | |
| CATAGGCTGTTGTGTTTACC+TGG | + | chr7_3:70000576-70000595 | None:intergenic | 45.0% | |
| CCAATAATATAGAGGGAGGG+AGG | + | chr7_3:70000613-70000632 | None:intergenic | 45.0% | |
| CCTCCCTCCCTCTATATTAT+TGG | - | chr7_3:70000610-70000629 | Msa1120530:three_prime_UTR | 45.0% | |
| TAGTGAGCTGACCTGAAAAC+GGG | + | chr7_3:70000803-70000822 | None:intergenic | 45.0% | |
| GTAGTGAGCTGACCTGAAAA+CGG | + | chr7_3:70000804-70000823 | None:intergenic | 45.0% | |
| CTTCTCGATGTCAATTTCCG+TGG | - | chr7_3:70000917-70000936 | Msa1120530:CDS | 45.0% | |
| ! | TTTTAAATGCTCCCCGCAAG+TGG | - | chr7_3:70000967-70000986 | Msa1120530:CDS | 45.0% |
| !! | TGGTCCTCAGGATTAGTTGT+CGG | - | chr7_3:70001000-70001019 | Msa1120530:CDS | 45.0% |
| GAACCGGAGTTAATCTGGTT+GGG | + | chr7_3:70001157-70001176 | None:intergenic | 45.0% | |
| TGAACCGGAGTTAATCTGGT+TGG | + | chr7_3:70001158-70001177 | None:intergenic | 45.0% | |
| GAGACTGACTACGAACGTTA+TGG | - | chr7_3:70001209-70001228 | Msa1120530:intron | 45.0% | |
| GTAGCTACAGAAGAATGAGC+TGG | - | chr7_3:70001441-70001460 | Msa1120530:intron | 45.0% | |
| ! | GCCTTTAGTTCGTTCTGCTA+TGG | - | chr7_3:70001596-70001615 | Msa1120530:intron | 45.0% |
| TAGTTCGTTCTGCTATGGTC+CGG | - | chr7_3:70001601-70001620 | Msa1120530:intron | 45.0% | |
| GACACATGCTCTTGCATACA+TGG | - | chr7_3:70001987-70002006 | Msa1120530:intron | 45.0% | |
| CAAAGAGGTAGTTGTGGAAG+AGG | - | chr7_3:70002588-70002607 | Msa1120530:intron | 45.0% | |
| GCAATACGGTGGAGTTAGAT+GGG | + | chr7_3:70002829-70002848 | None:intergenic | 45.0% | |
| GTTCCACGGAAAAGGCAATA+CGG | + | chr7_3:70002843-70002862 | None:intergenic | 45.0% | |
| ! | AGGAAACTGGTCTAGTTCCA+CGG | + | chr7_3:70002857-70002876 | None:intergenic | 45.0% |
| GAACTAGACCAGTTTCCTAG+TGG | - | chr7_3:70002859-70002878 | Msa1120530:intron | 45.0% | |
| !!! | ATTGCGAGGCCTTTTTGGTT+GGG | + | chr7_3:70003343-70003362 | None:intergenic | 45.0% |
| !! | AATTGCGAGGCCTTTTTGGT+TGG | + | chr7_3:70003344-70003363 | None:intergenic | 45.0% |
| ! | CAAGAATTGCGAGGCCTTTT+TGG | + | chr7_3:70003348-70003367 | None:intergenic | 45.0% |
| AGAGGAATGCAAGAATTGCG+AGG | + | chr7_3:70003357-70003376 | None:intergenic | 45.0% | |
| TCAAGAGGTGGGATTGATAG+AGG | + | chr7_3:70003375-70003394 | None:intergenic | 45.0% | |
| TTTGCGACAGATTGGAGTCT+GGG | + | chr7_3:70003476-70003495 | None:intergenic | 45.0% | |
| ! | TTTTGCGACAGATTGGAGTC+TGG | + | chr7_3:70003477-70003496 | None:intergenic | 45.0% |
| GACGGAGGGAGTAATAACTA+AGG | + | chr7_3:70003529-70003548 | None:intergenic | 45.0% | |
| !!! | GACACTTATTTTGGGACGGA+GGG | + | chr7_3:70003543-70003562 | None:intergenic | 45.0% |
| !!! | AGACACTTATTTTGGGACGG+AGG | + | chr7_3:70003544-70003563 | None:intergenic | 45.0% |
| GATCTAGGAATTCAGGCAGA+TGG | - | chr7_3:70003996-70004015 | Msa1120530:intron | 45.0% | |
| GCACACACTATGAGATCTCA+TGG | - | chr7_3:70004033-70004052 | Msa1120530:intron | 45.0% | |
| AAACATCGCCAGAAGAAGTC+TGG | + | chr7_3:70004585-70004604 | None:intergenic | 45.0% | |
| ! | TTCTGGCGATGTTTTCCAGA+TGG | - | chr7_3:70004591-70004610 | Msa1120530:CDS | 45.0% |
| ! | GCGATGTTTTCCAGATGGAA+AGG | - | chr7_3:70004596-70004615 | Msa1120530:CDS | 45.0% |
| !! | TGGTGACGAGAGTGTCATAA+AGG | - | chr7_3:70004747-70004766 | Msa1120530:intron | 45.0% |
| !! | GACGAGAGTGTCATAAAGGA+AGG | - | chr7_3:70004751-70004770 | Msa1120530:intron | 45.0% |
| GGACATAAGAGTTTCCCAAG+CGG | - | chr7_3:70004772-70004791 | Msa1120530:intron | 45.0% | |
| TACATGAAGTATGGCCGCTT+GGG | + | chr7_3:70004789-70004808 | None:intergenic | 45.0% | |
| ATACATGAAGTATGGCCGCT+TGG | + | chr7_3:70004790-70004809 | None:intergenic | 45.0% | |
| ACAAGTGATGCAGCAAGTAG+AGG | + | chr7_3:70005076-70005095 | None:intergenic | 45.0% | |
| ! | CTACTTGCTGCATCACTTGT+TGG | - | chr7_3:70005076-70005095 | Msa1120530:intron | 45.0% |
| !! | TCTCTCGAGTTGATGACTAC+TGG | - | chr7_3:70005101-70005120 | Msa1120530:intron | 45.0% |
| ! | GTGTTTGCTGGAGGTCTTAT+AGG | - | chr7_3:70005139-70005158 | Msa1120530:intron | 45.0% |
| CCTTCATGATGATAAGGAGG+AGG | + | chr7_3:70005316-70005335 | None:intergenic | 45.0% | |
| CCTCCTCCTTATCATCATGA+AGG | - | chr7_3:70005313-70005332 | Msa1120530:intron | 45.0% | |
| GGGGTCCTTATGCTTATTTC+AGG | - | chr7_3:70005785-70005804 | Msa1120530:intron | 45.0% | |
| !! | AGAAGCTCAAGTTGAGAACC+AGG | - | chr7_3:70005885-70005904 | Msa1120530:intron | 45.0% |
| CTCGGTTGTCACTACTAACT+TGG | - | chr7_3:70006062-70006081 | Msa1120530:CDS | 45.0% | |
| GTCTGTGTCCATTCCATTCC+AGG | - | chr7_3:70000555-70000574 | Msa1120530:three_prime_UTR | 50.0% | |
| AATATAGAGGGAGGGAGGGA+GGG | + | chr7_3:70000608-70000627 | None:intergenic | 50.0% | |
| TAATATAGAGGGAGGGAGGG+AGG | + | chr7_3:70000609-70000628 | None:intergenic | 50.0% | |
| TGGGGATCTCTGCTATGACT+GGG | - | chr7_3:70002234-70002253 | Msa1120530:intron | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | + | chr7_3:70002369-70002388 | None:intergenic | 50.0% | |
| ! | TGTCGGTATCGTGTCGATGT+CGG | - | chr7_3:70002472-70002491 | Msa1120530:CDS | 50.0% |
| TATTAGGCATGTCCCGGTGT+CGG | + | chr7_3:70002511-70002530 | None:intergenic | 50.0% | |
| TCCTCGTATTAGGCATGTCC+CGG | + | chr7_3:70002517-70002536 | None:intergenic | 50.0% | |
| GCACGGACAATCCTCGTATT+AGG | + | chr7_3:70002527-70002546 | None:intergenic | 50.0% | |
| GGCAATACGGTGGAGTTAGA+TGG | + | chr7_3:70002830-70002849 | None:intergenic | 50.0% | |
| ! | CTGGTCTAGTTCCACGGAAA+AGG | + | chr7_3:70002851-70002870 | None:intergenic | 50.0% |
| AAGGTGCAGGGTTCCTTTCT+AGG | + | chr7_3:70003307-70003326 | None:intergenic | 50.0% | |
| GGATGGAGGCAAACTGATAG+GGG | + | chr7_3:70003455-70003474 | None:intergenic | 50.0% | |
| GGGATGGAGGCAAACTGATA+GGG | + | chr7_3:70003456-70003475 | None:intergenic | 50.0% | |
| TGGGATGGAGGCAAACTGAT+AGG | + | chr7_3:70003457-70003476 | None:intergenic | 50.0% | |
| CAAAAATGCCCCCGTTAGCT+TGG | - | chr7_3:70003623-70003642 | Msa1120530:intron | 50.0% | |
| TCCAGGACTGATCTCAACTG+TGG | - | chr7_3:70003964-70003983 | Msa1120530:intron | 50.0% | |
| ACCACAGTTGAGATCAGTCC+TGG | + | chr7_3:70003968-70003987 | None:intergenic | 50.0% | |
| ! | TTGATGACTACTGGCACCAC+TGG | - | chr7_3:70005110-70005129 | Msa1120530:intron | 50.0% |
| !! | AGCTCAAGTTGAGAACCAGG+AGG | - | chr7_3:70005888-70005907 | Msa1120530:intron | 50.0% |
| !! | GCTCAAGTTGAGAACCAGGA+GGG | - | chr7_3:70005889-70005908 | Msa1120530:intron | 50.0% |
| AGGAGGGACAAAGTCACCAT+GGG | - | chr7_3:70005905-70005924 | Msa1120530:intron | 50.0% | |
| ACAAAGTCACCATGGGTGCA+TGG | - | chr7_3:70005912-70005931 | Msa1120530:intron | 50.0% | |
| CAAAGTCACCATGGGTGCAT+GGG | - | chr7_3:70005913-70005932 | Msa1120530:intron | 50.0% | |
| AAAGTCACCATGGGTGCATG+GGG | - | chr7_3:70005914-70005933 | Msa1120530:intron | 50.0% | |
| AAGTTAACCCCATGCACCCA+TGG | + | chr7_3:70005924-70005943 | None:intergenic | 50.0% | |
| ATATCGAACGCCCGTCAAAG+TGG | - | chr7_3:70006199-70006218 | Msa1120530:intron | 50.0% | |
| TGAGCTGACCTGAAAACGGG+TGG | + | chr7_3:70000800-70000819 | None:intergenic | 55.0% | |
| AAATGCTCCCCGCAAGTGGA+CGG | - | chr7_3:70000971-70000990 | Msa1120530:CDS | 55.0% | |
| CGTTCTGCTATGGTCCGGAT+AGG | - | chr7_3:70001606-70001625 | Msa1120530:intron | 55.0% | |
| ! | CCTCCGGCTCGATAAATCCT+AGG | + | chr7_3:70002213-70002232 | None:intergenic | 55.0% |
| CCTAGGATTTATCGAGCCGG+AGG | - | chr7_3:70002210-70002229 | Msa1120530:intron | 55.0% | |
| GATTTATCGAGCCGGAGGCT+GGG | - | chr7_3:70002215-70002234 | Msa1120530:intron | 55.0% | |
| ATTTATCGAGCCGGAGGCTG+GGG | - | chr7_3:70002216-70002235 | Msa1120530:intron | 55.0% | |
| CTGGGGATCTCTGCTATGAC+TGG | - | chr7_3:70002233-70002252 | Msa1120530:intron | 55.0% | |
| GGGGATCTCTGCTATGACTG+GGG | - | chr7_3:70002235-70002254 | Msa1120530:intron | 55.0% | |
| ACGGATACGGACACAGACAC+CGG | - | chr7_3:70002376-70002395 | Msa1120530:intron | 55.0% | |
| ACCGGGACATGCCTAATACG+AGG | - | chr7_3:70002513-70002532 | Msa1120530:CDS | 55.0% | |
| CCACGGAAAAGGCAATACGG+TGG | + | chr7_3:70002840-70002859 | None:intergenic | 55.0% | |
| ! | CCACCGTATTGCCTTTTCCG+TGG | - | chr7_3:70002837-70002856 | Msa1120530:CDS | 55.0% |
| GTGCAGGGTTCCTTTCTAGG+AGG | + | chr7_3:70003304-70003323 | None:intergenic | 55.0% | |
| ! | CAGATTGGAGTCTGGGATGG+AGG | + | chr7_3:70003469-70003488 | None:intergenic | 55.0% |
| CGACAGATTGGAGTCTGGGA+TGG | + | chr7_3:70003472-70003491 | None:intergenic | 55.0% | |
| CATAGTGTGTGCGCCAAGCT+GGG | + | chr7_3:70004025-70004044 | None:intergenic | 55.0% | |
| TCATAGTGTGTGCGCCAAGC+TGG | + | chr7_3:70004026-70004045 | None:intergenic | 55.0% | |
| CTTACAGGAACAGCCCAGAC+AGG | + | chr7_3:70004213-70004232 | None:intergenic | 55.0% | |
| GACCTCGACCAGACTTCTTC+TGG | - | chr7_3:70004574-70004593 | Msa1120530:CDS | 55.0% | |
| ! | GCAGGGTCATTTGCTGGTCT+AGG | - | chr7_3:70004968-70004987 | Msa1120530:intron | 55.0% |
| TGACTACTGGCACCACTGGA+CGG | - | chr7_3:70005114-70005133 | Msa1120530:intron | 55.0% | |
| CATGGTGACTTTGTCCCTCC+TGG | + | chr7_3:70005906-70005925 | None:intergenic | 55.0% | |
| CAGGAGGGACAAAGTCACCA+TGG | - | chr7_3:70005904-70005923 | Msa1120530:intron | 55.0% | |
| AGGGAGGGAGGCAGTGTCAT+AGG | + | chr7_3:70000593-70000612 | None:intergenic | 60.0% | |
| AATCCCACCGTCCACTTGCG+GGG | + | chr7_3:70000981-70001000 | None:intergenic | 60.0% | |
| CAATCCCACCGTCCACTTGC+GGG | + | chr7_3:70000982-70001001 | None:intergenic | 60.0% | |
| CCAATCCCACCGTCCACTTG+CGG | + | chr7_3:70000983-70001002 | None:intergenic | 60.0% | |
| GGATTTATCGAGCCGGAGGC+TGG | - | chr7_3:70002214-70002233 | Msa1120530:intron | 60.0% | |
| TAGCAGAGATCCCCAGCCTC+CGG | + | chr7_3:70002229-70002248 | None:intergenic | 60.0% | |
| CACAGACACCGGACACGACA+CGG | - | chr7_3:70002387-70002406 | Msa1120530:intron | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr7_3:70002398-70002417 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | - | chr7_3:70002495-70002514 | Msa1120530:CDS | 60.0% | |
| AGGCAGATGGAAGCCCAGCT+TGG | - | chr7_3:70004009-70004028 | Msa1120530:intron | 60.0% | |
| CGCCAGAAGAAGTCTGGTCG+AGG | + | chr7_3:70004579-70004598 | None:intergenic | 60.0% | |
| CAGCAAACACGTCCGTCCAG+TGG | + | chr7_3:70005129-70005148 | None:intergenic | 60.0% | |
| CACTGGACGGACGTGTTTGC+TGG | - | chr7_3:70005127-70005146 | Msa1120530:intron | 60.0% | |
| ! | TGGACGGACGTGTTTGCTGG+AGG | - | chr7_3:70005130-70005149 | Msa1120530:intron | 60.0% |
| ATAGAGGGAGGGAGGGAGGG+AGG | + | chr7_3:70000605-70000624 | None:intergenic | 65.0% | |
| CCGCAAGTGGACGGTGGGAT+TGG | - | chr7_3:70000980-70000999 | Msa1120530:CDS | 65.0% | |
| !! | GGACGGTGGGATTGGTCCTC+AGG | - | chr7_3:70000988-70001007 | Msa1120530:CDS | 65.0% |
| CACGACACGTGTCCGACACC+GGG | - | chr7_3:70002496-70002515 | Msa1120530:CDS | 65.0% | |
| TGCTCCCCGCAAGTGGACGG+TGG | - | chr7_3:70000974-70000993 | Msa1120530:CDS | 70.0% | |
| GCTCCCCGCAAGTGGACGGT+GGG | - | chr7_3:70000975-70000994 | Msa1120530:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 70000415 | 70006444 | 70000415 | ID=Msa1120530;Name=Msa1120530 |
| chr7_3 | mRNA | 70000415 | 70006444 | 70000415 | ID=Msa1120530-mRNA-1;Parent=Msa1120530;Name=Msa1120530-mRNA-1;_AED=0.26;_eAED=0.26;_QI=220|1|1|1|0.66|0.6|10|439|380 |
| chr7_3 | exon | 70000415 | 70001077 | 70000415 | ID=Msa1120530-mRNA-1:exon:17831;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70001525 | 70001584 | 70001525 | ID=Msa1120530-mRNA-1:exon:17830;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70001699 | 70001887 | 70001699 | ID=Msa1120530-mRNA-1:exon:17829;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70002054 | 70002144 | 70002054 | ID=Msa1120530-mRNA-1:exon:17828;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70002239 | 70002348 | 70002239 | ID=Msa1120530-mRNA-1:exon:17827;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70002455 | 70002542 | 70002455 | ID=Msa1120530-mRNA-1:exon:17826;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70002632 | 70002856 | 70002632 | ID=Msa1120530-mRNA-1:exon:17825;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70004552 | 70004644 | 70004552 | ID=Msa1120530-mRNA-1:exon:17824;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70006049 | 70006169 | 70006049 | ID=Msa1120530-mRNA-1:exon:17823;Parent=Msa1120530-mRNA-1 |
| chr7_3 | exon | 70006283 | 70006444 | 70006283 | ID=Msa1120530-mRNA-1:exon:17822;Parent=Msa1120530-mRNA-1 |
| chr7_3 | five_prime_UTR | 70006283 | 70006444 | 70006283 | ID=Msa1120530-mRNA-1:five_prime_utr;Parent=Msa1120530-mRNA-1 |
| chr7_3 | five_prime_UTR | 70006112 | 70006169 | 70006112 | ID=Msa1120530-mRNA-1:five_prime_utr;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70006049 | 70006111 | 70006049 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70004552 | 70004644 | 70004552 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70002632 | 70002856 | 70002632 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70002455 | 70002542 | 70002455 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70002239 | 70002348 | 70002239 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70002054 | 70002144 | 70002054 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70001699 | 70001887 | 70001699 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70001525 | 70001584 | 70001525 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | CDS | 70000854 | 70001077 | 70000854 | ID=Msa1120530-mRNA-1:cds;Parent=Msa1120530-mRNA-1 |
| chr7_3 | three_prime_UTR | 70000415 | 70000853 | 70000415 | ID=Msa1120530-mRNA-1:three_prime_utr;Parent=Msa1120530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
