AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1245940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245940 MtrunA17_Chr4g0058461 93.800 871 47 2 1 868 1 867 0.0 1591
Msa1245940 MtrunA17_Chr4g0058471 65.517 87 30 0 1 87 1 87 1.51e-32 124
Msa1245940 MtrunA17_Chr4g0058521 63.158 95 32 2 3 95 8 101 7.72e-24 99.0
Msa1245940 MtrunA17_Chr4g0058511 55.814 86 38 0 1 86 32 117 5.11e-18 83.6
Msa1245940 MtrunA17_Chr4g0058491 62.500 56 21 0 32 87 1 56 1.52e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245940 AT4G24690.1 57.678 267 97 6 368 622 242 504 1.78e-95 315
Msa1245940 AT4G24690.1 58.974 117 36 2 763 868 586 701 6.24e-32 133
Msa1245940 AT4G24690.1 44.444 171 80 5 3 167 6 167 1.02e-31 133

Find 281 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAGCCTCAAGCTCTTTA+AGG 0.137794 8_2:+36222396 None:intergenic
CAGGTGGAGCATTGGGATTT+TGG 0.151370 8_2:+36222810 None:intergenic
GCTGATTCAATTTCCAAAAT+TGG 0.156394 8_2:-36224689 Msa1245940:CDS
TAGAATAGACTGTCCAATTT+TGG 0.173752 8_2:+36224676 None:intergenic
GCTAGATAGTCGGTTCATTT+TGG 0.204417 8_2:-36223520 Msa1245940:CDS
GCTTTCCTTCTTCGTATCTA+TGG 0.221649 8_2:-36225920 Msa1245940:exon
TTCGCATTTCTCCATTTAAA+AGG 0.223823 8_2:-36224004 Msa1245940:CDS
TTGAAACGAGGTCCGGTTAT+TGG 0.231297 8_2:+36223909 None:intergenic
CTCCCTCTCTGTTGACTTAG+AGG 0.241946 8_2:-36223361 Msa1245940:intron
AAAATAGGTGGTGGTATCTT+TGG 0.251206 8_2:+36223579 None:intergenic
TCTCTCTCTGGACATAAATT+TGG 0.269639 8_2:-36223119 Msa1245940:CDS
AAACGAGCTTACAAATTCTT+TGG 0.275467 8_2:+36223681 None:intergenic
CATCAGCTTTAACAAAGTTT+AGG 0.277942 8_2:+36224801 None:intergenic
CATCATTTGCTTCAATGAAA+TGG 0.285825 8_2:-36223776 Msa1245940:CDS
CACAGTAGATTGTCCAGTTT+GGG 0.296918 8_2:+36224364 None:intergenic
ATAAATTTGGCCAACGTGTT+TGG 0.300638 8_2:-36223106 Msa1245940:CDS
ACCATTTGATTCACAGGTTC+AGG 0.310807 8_2:+36222791 None:intergenic
AACTCTGCGGTGTTCTTGAT+TGG 0.317579 8_2:-36222301 Msa1245940:CDS
TTCTTGGTTGCATTGTTATT+AGG 0.318324 8_2:+36224113 None:intergenic
ATTGCTTTACAGGCGAAATA+TGG 0.319387 8_2:-36225151 Msa1245940:intron
CCAAGGGAACTCAACTTGTT+TGG 0.327817 8_2:-36223407 Msa1245940:CDS
ATATGTATCTACCAGGTAAC+TGG 0.329491 8_2:+36223159 None:intergenic
TTACCCTTGTCATCACTAAC+AGG 0.332971 8_2:+36224170 None:intergenic
GAAACCTAAAGTAGGGTTCT+TGG 0.340305 8_2:+36224097 None:intergenic
ATTGCAGGGGCTGAGGCGGC+AGG 0.341825 8_2:+36222704 None:intergenic
TAAATTTGGCCAACGTGTTT+GGG 0.345801 8_2:-36223105 Msa1245940:CDS
GCAACCAAGAACCCTACTTT+AGG 0.347026 8_2:-36224101 Msa1245940:CDS
CTACTGTGAAATCCCCTTAC+TGG 0.349049 8_2:-36224349 Msa1245940:CDS
AGAGTATGTGTCCCAGAAAA+TGG 0.350776 8_2:+36224056 None:intergenic
CCAGAGAAAGAGGGAGCAGC+TGG 0.360449 8_2:+36222626 None:intergenic
TCACAGTAGATTGTCCAGTT+TGG 0.361864 8_2:+36224363 None:intergenic
CCATCTCGTGTAGCTCTTCA+AGG 0.362269 8_2:+36222270 None:intergenic
TAAGGAACAGAGGCAGGAAT+TGG 0.372232 8_2:-36222765 Msa1245940:CDS
ATCTTAACATGGCTGGGTTG+AGG 0.372436 8_2:-36225078 Msa1245940:CDS
AACATTCCCAGGAGATCTTA+AGG 0.372829 8_2:+36224496 None:intergenic
CACCAGAATGATTGATCATC+TGG 0.373848 8_2:+36224906 None:intergenic
TGATGCTTTGCAAGCTCTGC+CGG 0.380326 8_2:-36224783 Msa1245940:CDS
CCAGCTGCTCCCTCTTTCTC+TGG 0.381880 8_2:-36222626 Msa1245940:CDS
TATTCAGATATGAACATCTT+GGG 0.383029 8_2:+36223704 None:intergenic
ACTGATTCAATTTCCCAAAC+TGG 0.383587 8_2:-36224377 Msa1245940:CDS
CCTTAAAGAGCTTGAGGCTA+TGG 0.384896 8_2:-36222396 Msa1245940:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.385339 8_2:-36222536 Msa1245940:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.388452 8_2:-36222566 Msa1245940:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.388452 8_2:-36222596 Msa1245940:CDS
AAGCATCAAACGTGTTGTTA+TGG 0.390196 8_2:-36221652 Msa1245940:CDS
ATCTTTGTGAATGCAGTAGA+TGG 0.397744 8_2:+36223465 None:intergenic
TACCCCATTATTGATTTCTC+TGG 0.397922 8_2:-36222656 Msa1245940:CDS
CAACGTGAGATTGGCCTTGA+GGG 0.398310 8_2:+36224651 None:intergenic
CCGGCTGGTCCCTCTTTCTC+TGG 0.402017 8_2:-36222506 Msa1245940:CDS
CTCTTTCTCTGGCGCAGCCC+CGG 0.403274 8_2:-36222615 Msa1245940:CDS
TGGTACTCTATTTACGTTAG+TGG 0.403339 8_2:+36224208 None:intergenic
CGATTGGATCTTAACATGGC+TGG 0.403836 8_2:-36225085 Msa1245940:CDS
ACAGGTTCAGGTGGAGCATT+GGG 0.405280 8_2:+36222803 None:intergenic
TGTGCCAGAGAAATCAATAA+TGG 0.405570 8_2:+36222652 None:intergenic
CAAGGCCAATCTCACGTTGC+TGG 0.405746 8_2:-36224647 Msa1245940:CDS
GTTGAAGTTTGCGGAATGGC+TGG 0.405848 8_2:+36222476 None:intergenic
ATCATTTGCTTCAATGAAAT+GGG 0.406447 8_2:-36223775 Msa1245940:CDS
CGGGGCTGCGCCAGAGAAAG+AGG 0.406658 8_2:+36222616 None:intergenic
GGAGGAACATTGAGATCAAC+CGG 0.409586 8_2:+36224248 None:intergenic
TGGAGGATGGCATCTCTCTC+TGG 0.412068 8_2:-36223131 Msa1245940:CDS
ACGTGTTTGGGTCCTTATAC+AGG 0.412921 8_2:-36223093 Msa1245940:intron
GTGCCAGAGAAATCAATAAT+GGG 0.413016 8_2:+36222653 None:intergenic
CCAGAGAAAGAGGGAGCAGC+CGG 0.413458 8_2:+36222566 None:intergenic
CCAGAGAAAGAGGGAGCAGC+CGG 0.413458 8_2:+36222596 None:intergenic
CGGGGCTGTGCCAGAGAAAG+AGG 0.415013 8_2:+36222586 None:intergenic
CCAAACAAGTTGAGTTCCCT+TGG 0.416793 8_2:+36223407 None:intergenic
ACTGTCATCCTACCTGTATA+AGG 0.417325 8_2:+36223081 None:intergenic
GCCATCCCCTTAAGATCTCC+TGG 0.418255 8_2:-36224503 Msa1245940:CDS
CCAGAGAAAGAGGGAGCAGC+CGG 0.420571 8_2:+36222536 None:intergenic
ACAAAGGTAGCTTCATTTGT+AGG 0.422052 8_2:+36222731 None:intergenic
GTTGTTATGGATTTACTCAA+TGG 0.424118 8_2:-36221639 Msa1245940:CDS
TCCTGTTTGTTTCTGTGTCA+CGG 0.426335 8_2:+36221697 None:intergenic
AGATGTTATATATGTTTAGT+TGG 0.427727 8_2:-36221593 Msa1245940:three_prime_UTR
TGTGAATCAAATGGTTGATA+AGG 0.428331 8_2:-36222783 Msa1245940:CDS
GGAACTCAACTTGTTTGGAT+TGG 0.429588 8_2:-36223402 Msa1245940:CDS
GAAGGTGACACTGAAATTGC+AGG 0.431036 8_2:+36222689 None:intergenic
TGTTTCAAATTCTGTGCTAC+AGG 0.434650 8_2:-36224462 Msa1245940:CDS
GAATAAAGAGCCTCGCGTAT+TGG 0.436479 8_2:+36224758 None:intergenic
AAAATATAGTCTGAAGTCAT+AGG 0.436772 8_2:+36221404 None:intergenic
TTCTCTGGCACATCCCCGGC+TGG 0.437116 8_2:-36222521 Msa1245940:CDS
GACTTTGCATGCTTCGAAAG+AGG 0.438676 8_2:+36223546 None:intergenic
ACTCAACTTGTTTGGATTGG+AGG 0.441260 8_2:-36223399 Msa1245940:CDS
AAAGTTAGATTCGCATCAGC+AGG 0.441418 8_2:+36225028 None:intergenic
AATTGAATCAGTGGAATTAG+AGG 0.443200 8_2:+36224388 None:intergenic
TCTTAACATGGCTGGGTTGA+GGG 0.444485 8_2:-36225077 Msa1245940:CDS
TACCACCAGCAACGTGAGAT+TGG 0.445557 8_2:+36224642 None:intergenic
CGAAATATGGAGATGCCCTC+AGG 0.446041 8_2:-36225138 Msa1245940:CDS
GGATTCTTCTCTCGTTATCA+AGG 0.446865 8_2:-36225899 Msa1245940:intron
GAGCTTGTACCAATTGCAAC+AGG 0.448357 8_2:+36224320 None:intergenic
CATTCCGCAAACTTCAACTC+TGG 0.450561 8_2:-36222471 Msa1245940:CDS
CCAGAAAATGGACAGTCAAT+AGG 0.454035 8_2:+36224068 None:intergenic
CACAGGTTCAGGTGGAGCAT+TGG 0.454919 8_2:+36222802 None:intergenic
CTCTTTCTCTGGCACAGCCC+CGG 0.456822 8_2:-36222585 Msa1245940:CDS
ACAAATGAAGCTACCTTTGT+CGG 0.458001 8_2:-36222728 Msa1245940:CDS
GTATTCAGATATGAACATCT+TGG 0.458334 8_2:+36223703 None:intergenic
TTATCAACCATTTGATTCAC+AGG 0.459634 8_2:+36222785 None:intergenic
GTCCAGATGATCAATCATTC+TGG 0.463564 8_2:-36224908 Msa1245940:CDS
CAGGTTGAGTCTAAAATTGC+GGG 0.464751 8_2:-36224278 Msa1245940:CDS
GGCTCTAGTGGAGGTGCTAG+TGG 0.465069 8_2:-36224866 Msa1245940:CDS
TTTAGGAGTGACAGATTCAC+TGG 0.467029 8_2:+36224598 None:intergenic
TCAGCAATATTTGCTAGCAC+TGG 0.467080 8_2:+36224707 None:intergenic
CCAGAGAAAGAGGGACCAGC+CGG 0.467720 8_2:+36222506 None:intergenic
ACTCTGCGGTGTTCTTGATT+GGG 0.468201 8_2:-36222300 Msa1245940:CDS
CGGGGATGTGCCAGAGAAAG+AGG 0.468555 8_2:+36222526 None:intergenic
CGGGGATGTGCCAGAGAAAG+AGG 0.468555 8_2:+36222556 None:intergenic
TGGGGCTGCGCCAGAGAAAG+AGG 0.468968 8_2:+36222496 None:intergenic
TTGGTGTTGGTAGCTCTGAA+TGG 0.475753 8_2:-36222889 Msa1245940:CDS
TGTGGAGTGTATCCAATAAC+CGG 0.475772 8_2:-36223921 Msa1245940:CDS
TACTGTGAAATCCCCTTACT+GGG 0.475999 8_2:-36224348 Msa1245940:CDS
TTGGTAGCTCTGAATGGCCT+CGG 0.477438 8_2:-36222883 Msa1245940:CDS
GCATCCAGAGTTGAAGTTTG+CGG 0.479595 8_2:+36222467 None:intergenic
CTTTAACAAAGTTTAGGAAA+GGG 0.480571 8_2:+36224807 None:intergenic
CTCTTTCTCTGGCACATCCC+CGG 0.481260 8_2:-36222525 Msa1245940:CDS
CTCTTTCTCTGGCACATCCC+CGG 0.481260 8_2:-36222555 Msa1245940:CDS
ACGAAGAAGGAAAGCGAAGA+AGG 0.482083 8_2:+36225928 None:intergenic
CTTAAAGAGCTTGAGGCTAT+GGG 0.484713 8_2:-36222395 Msa1245940:CDS
TCTGATGCTGGTGGCTCTAG+TGG 0.484789 8_2:-36224878 Msa1245940:CDS
TTGAAGTTTGCGGAATGGCT+GGG 0.486247 8_2:+36222477 None:intergenic
ACATTCCCAGGAGATCTTAA+GGG 0.486983 8_2:+36224497 None:intergenic
CTAGCATAGTCACTGGCATT+GGG 0.489217 8_2:+36224539 None:intergenic
CACTGAAATTGCAGGGGCTG+AGG 0.489264 8_2:+36222697 None:intergenic
TTTAGGAAAGGGTCTGAGAC+AGG 0.490112 8_2:+36224818 None:intergenic
TGAGGCTATGGGTTTCAAGC+AGG 0.491156 8_2:-36222384 Msa1245940:CDS
CTACTGCATTCACAAAGATC+TGG 0.496939 8_2:-36223461 Msa1245940:CDS
CAGAGAAAGAGGGACCAGCC+GGG 0.497692 8_2:+36222507 None:intergenic
TCCGTGACACAGAAACAAAC+AGG 0.498645 8_2:-36221698 Msa1245940:CDS
TCTAGCATAGTCACTGGCAT+TGG 0.500215 8_2:+36224538 None:intergenic
AAGGAACAGAGGCAGGAATT+GGG 0.502089 8_2:-36222764 Msa1245940:CDS
TATCAATGTTCAACCTATTG+AGG 0.502390 8_2:-36222852 Msa1245940:CDS
TCTGTCACTCCTAAAGCAAA+AGG 0.510808 8_2:-36224590 Msa1245940:CDS
AGATAATGATCTTGTGGAAG+AGG 0.510946 8_2:-36222423 Msa1245940:CDS
CAGAGAAAGAGGGAGCAGCC+GGG 0.511097 8_2:+36222537 None:intergenic
GCAGGTTGATTTAAACAAAG+AGG 0.511557 8_2:-36222366 Msa1245940:CDS
GGTTGATAAGGAACAGAGGC+AGG 0.513182 8_2:-36222771 Msa1245940:CDS
GAGAATGACAGATTACAATC+TGG 0.514264 8_2:-36222339 Msa1245940:CDS
CAGAGAAAGAGGGAGCAGCT+GGG 0.514876 8_2:+36222627 None:intergenic
TTGCAGGGGCTGAGGCGGCA+GGG 0.515093 8_2:+36222705 None:intergenic
AGAGCCTCGCGTATTGGCTC+CGG 0.515321 8_2:+36224764 None:intergenic
ATTTACGTTAGTGGATGAGT+AGG 0.515638 8_2:+36224217 None:intergenic
CAGAGAAAGAGGGAGCAGCC+GGG 0.516324 8_2:+36222567 None:intergenic
CAGAGAAAGAGGGAGCAGCC+GGG 0.516324 8_2:+36222597 None:intergenic
ACGTCAAGCTCTTTCTCTAC+AGG 0.519273 8_2:+36223203 None:intergenic
GATTGGATCTTAACATGGCT+GGG 0.519526 8_2:-36225084 Msa1245940:CDS
AGACAGGAGGATATGTCAAA+GGG 0.520390 8_2:+36224834 None:intergenic
AAGAAGAAGCTTTAGCGTAC+CGG 0.520617 8_2:+36226058 None:intergenic
TAGCGTTAATAGCGGCTCAC+CGG 0.521967 8_2:-36226077 Msa1245940:five_prime_UTR
TAAAATTGCGGGAGTTTCCC+CGG 0.522427 8_2:-36224267 Msa1245940:CDS
GTGGATGAGTAGGGATTGCA+TGG 0.522591 8_2:+36224227 None:intergenic
GGAACTTGTCTCGAAGATGC+AGG 0.522795 8_2:+36224410 None:intergenic
CATTCAATGCCACCTCCTCT+AGG 0.523514 8_2:-36224032 Msa1245940:CDS
TGAAATTGCAGGGGCTGAGG+CGG 0.524012 8_2:+36222700 None:intergenic
GGATTTACTCAATGGAGAGT+AGG 0.524594 8_2:-36221631 Msa1245940:exon
TTTGGATTTGAAACGAGGTC+CGG 0.524974 8_2:+36223902 None:intergenic
ACCTGAACCTGTGAATCAAA+TGG 0.525429 8_2:-36222792 Msa1245940:CDS
TTTAGAGCGCCCCAGTTACC+TGG 0.526761 8_2:-36223170 Msa1245940:CDS
GCTCACTCTGATGCATTGAA+TGG 0.527413 8_2:-36223975 Msa1245940:CDS
TTGAATATTCCCCTTGGTGT+TGG 0.532493 8_2:-36222902 Msa1245940:CDS
TTTACGTTAGTGGATGAGTA+GGG 0.532938 8_2:+36224218 None:intergenic
GCTTTAACAAAGTTTAGGAA+AGG 0.533743 8_2:+36224806 None:intergenic
GGAGCACTGAAACCTAAAGT+AGG 0.534494 8_2:+36224089 None:intergenic
CTGGTAGATACATATCATAC+TGG 0.536570 8_2:-36223151 Msa1245940:CDS
AAGCACAGATAATGATCTTG+TGG 0.539260 8_2:-36222429 Msa1245940:CDS
TTTAGACTCAACCTGTCGAC+TGG 0.539536 8_2:+36224286 None:intergenic
TGTCATAGACGGAACAATGA+TGG 0.540855 8_2:-36223490 Msa1245940:CDS
CGAAAGTTTCCTAGAGGAGG+TGG 0.541922 8_2:+36224023 None:intergenic
AGAATCCATAGATACGAAGA+AGG 0.548262 8_2:+36225915 None:intergenic
CAAACAAGTTGAGTTCCCTT+GGG 0.548283 8_2:+36223408 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+36222538 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+36222568 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+36222598 None:intergenic
TTGGATGTTAATGTCATAGA+CGG 0.549049 8_2:-36223501 Msa1245940:CDS
TCAGATTGATTATATCAGAA+TGG 0.550265 8_2:-36223749 Msa1245940:CDS
CACGAACATTGAAGCGCCTG+AGG 0.551408 8_2:+36225122 None:intergenic
AGAGAAAGAGGGACCAGCCG+GGG 0.554370 8_2:+36222508 None:intergenic
TCTGGTGCTAAATCTGATGC+TGG 0.555805 8_2:-36224890 Msa1245940:CDS
GGTTGCAAATCAAGATAGAA+TGG 0.556980 8_2:+36221356 None:intergenic
TGAAGTTTGCGGAATGGCTG+GGG 0.557993 8_2:+36222478 None:intergenic
CAGTATGATATGTATCTACC+AGG 0.558081 8_2:+36223152 None:intergenic
TATGTATCTACCAGGTAACT+GGG 0.559766 8_2:+36223160 None:intergenic
ATCTGGCGGATGCGCAACAA+TGG 0.559803 8_2:-36223444 Msa1245940:CDS
TCTACAGGTACACCGTCCTC+AGG 0.560554 8_2:+36223218 None:intergenic
AGAGAAAGAGGGAGCAGCTG+GGG 0.560636 8_2:+36222628 None:intergenic
CAGAGTTGAAGTTTGCGGAA+TGG 0.561176 8_2:+36222472 None:intergenic
CCTTGAAGAGCTACACGAGA+TGG 0.562183 8_2:-36222270 Msa1245940:intron
TTCAAATTCTGTGCTACAGG+AGG 0.562592 8_2:-36224459 Msa1245940:CDS
CCCAGGAGATCTTAAGGGGA+TGG 0.564848 8_2:+36224502 None:intergenic
TTGAGATATGTTGATGAGGA+TGG 0.568310 8_2:-36225007 Msa1245940:CDS
TCTTTATTCGTCATTTGCAA+AGG 0.570245 8_2:-36224744 Msa1245940:CDS
GCAACGTGAGATTGGCCTTG+AGG 0.571363 8_2:+36224650 None:intergenic
GGCACTTCAGTGTGGCCCAA+GGG 0.572964 8_2:-36223423 Msa1245940:CDS
TGTGGATGAGAATAATCGAT+TGG 0.573157 8_2:-36225101 Msa1245940:CDS
CTAACAGGGACTGCTGATGA+AGG 0.574980 8_2:+36224185 None:intergenic
AGTGACTATGCTAGATCTAG+TGG 0.575122 8_2:-36224530 Msa1245940:CDS
GAGACAGGAGGATATGTCAA+AGG 0.575364 8_2:+36224833 None:intergenic
GAGCACTGAAACCTAAAGTA+GGG 0.576966 8_2:+36224090 None:intergenic
GGCTCTCCTTAAAGAGCTTG+AGG 0.577007 8_2:-36222402 Msa1245940:CDS
ATTGAATGGCATGTTTCACA+AGG 0.578053 8_2:-36223961 Msa1245940:CDS
CACACTTTGGATTTGAAACG+AGG 0.578382 8_2:+36223897 None:intergenic
AAGGTGACACTGAAATTGCA+GGG 0.578453 8_2:+36222690 None:intergenic
CTGAACTTGAATATTCCCCT+TGG 0.578935 8_2:-36222908 Msa1245940:CDS
ATTTGATTCACAGGTTCAGG+TGG 0.578969 8_2:+36222794 None:intergenic
GGGGCTGCGCCAGAGAAAGA+GGG 0.579540 8_2:+36222617 None:intergenic
GGGGTCCGTTGTGATGGTTG+TGG 0.582288 8_2:-36223939 Msa1245940:CDS
TGTTGATGAGGATGGCGACT+TGG 0.583892 8_2:-36224999 Msa1245940:CDS
TGAGGCGGCAGGGCCGACAA+AGG 0.585780 8_2:+36222715 None:intergenic
TGGCACTTCAGTGTGGCCCA+AGG 0.586891 8_2:-36223424 Msa1245940:CDS
GAAGGTCGATGCATCTCTCA+AGG 0.588481 8_2:-36222957 Msa1245940:intron
AGTTTGGGAAATTGAATCAG+TGG 0.589643 8_2:+36224379 None:intergenic
TTGAATATCCCAGGTTCCTG+AGG 0.592600 8_2:-36223234 Msa1245940:intron
CTTGGGGAACGAAAAGATGC+AGG 0.597899 8_2:+36223721 None:intergenic
CAGTCTATTCTAAACCCTCA+AGG 0.600178 8_2:-36224665 Msa1245940:CDS
AACCTCTAAGTCAACAGAGA+GGG 0.600363 8_2:+36223359 None:intergenic
TGGCGACTTGGTGAATCTTG+TGG 0.604928 8_2:-36224987 Msa1245940:CDS
GGGGCTGTGCCAGAGAAAGA+GGG 0.605166 8_2:+36222587 None:intergenic
GGGGATGTGCCAGAGAAAGA+GGG 0.605312 8_2:+36222527 None:intergenic
GGGGATGTGCCAGAGAAAGA+GGG 0.605312 8_2:+36222557 None:intergenic
ACAGGTTGAGTCTAAAATTG+CGG 0.605495 8_2:-36224279 Msa1245940:CDS
CCATCCCCTTAAGATCTCCT+GGG 0.605783 8_2:-36224502 Msa1245940:CDS
CTGTGAAATCCCCTTACTGG+GGG 0.606740 8_2:-36224346 Msa1245940:CDS
CATTCCCAGGAGATCTTAAG+GGG 0.607259 8_2:+36224498 None:intergenic
GGGGCTGCGCCAGAGAAAGA+GGG 0.607968 8_2:+36222497 None:intergenic
AGTCCCTGTTAGTGATGACA+AGG 0.614739 8_2:-36224174 Msa1245940:CDS
AGGTCCGCAGTCTCCATGTG+TGG 0.614993 8_2:-36224570 Msa1245940:CDS
ATTGAATCAGTGGAATTAGA+GGG 0.618823 8_2:+36224389 None:intergenic
GGCCAATCTCACGTTGCTGG+TGG 0.619129 8_2:-36224644 Msa1245940:CDS
GATGCTGGTGGCTCTAGTGG+AGG 0.620357 8_2:-36224875 Msa1245940:CDS
ACTAGATCTAGCATAGTCAC+TGG 0.623545 8_2:+36224532 None:intergenic
TTCAGAGCTACCAACACCAA+GGG 0.624349 8_2:+36222892 None:intergenic
TGAATGGCATGTTTCACAAG+GGG 0.625755 8_2:-36223959 Msa1245940:CDS
CAGGCGCTTCAATGTTCGTG+TGG 0.626475 8_2:-36225119 Msa1245940:CDS
CTGCATTCACAAAGATCTGG+CGG 0.628230 8_2:-36223458 Msa1245940:CDS
TAATCGATTGGATCTTAACA+TGG 0.630522 8_2:-36225089 Msa1245940:CDS
ATTCAGATATGAACATCTTG+GGG 0.630633 8_2:+36223705 None:intergenic
ATATCCCAGGTTCCTGAGGA+CGG 0.631323 8_2:-36223230 Msa1245940:intron
ATACATATCATACTGGAGGA+TGG 0.631704 8_2:-36223144 Msa1245940:CDS
ATGCGAAAGTTTCCTAGAGG+AGG 0.632193 8_2:+36224020 None:intergenic
GCTATTAACGCTAAATGAAG+CGG 0.635016 8_2:+36226087 None:intergenic
TTGAATGGCATGTTTCACAA+GGG 0.637056 8_2:-36223960 Msa1245940:CDS
TCGTGTAGCTCTTCAAGGAG+AGG 0.639515 8_2:+36222275 None:intergenic
AACTTTGAGATATGTTGATG+AGG 0.640200 8_2:-36225011 Msa1245940:CDS
CTTGTACCAATTGCAACAGG+AGG 0.643181 8_2:+36224323 None:intergenic
GTAGATACATATCATACTGG+AGG 0.647336 8_2:-36223148 Msa1245940:CDS
TCAATGCATCAGAGTGAGCG+TGG 0.647531 8_2:+36223979 None:intergenic
TAAATCGTCTATTGATGACA+AGG 0.648030 8_2:-36224150 Msa1245940:CDS
TACCCTTGTCATCACTAACA+GGG 0.648629 8_2:+36224171 None:intergenic
AACACTAAATAATCGCTGCT+AGG 0.648861 8_2:-36221554 Msa1245940:three_prime_UTR
CAAAGTCTAAGCTAGATAGT+CGG 0.651873 8_2:-36223530 Msa1245940:CDS
GGTGCTAAATCTGATGCTGG+TGG 0.654255 8_2:-36224887 Msa1245940:CDS
ATGGGGTAAGAAATAGACGA+AGG 0.654909 8_2:+36222671 None:intergenic
GAGGAACATTGAGATCAACC+GGG 0.658453 8_2:+36224249 None:intergenic
GCTTCATTTAGCGTTAATAG+CGG 0.661723 8_2:-36226085 Msa1245940:five_prime_UTR
AAGTTAGATTCGCATCAGCA+GGG 0.661745 8_2:+36225029 None:intergenic
ACGAACATTGAAGCGCCTGA+GGG 0.664144 8_2:+36225123 None:intergenic
TGCCAGAGAAATCAATAATG+GGG 0.667959 8_2:+36222654 None:intergenic
ACAGGGACTGCTGATGAAGG+TGG 0.672158 8_2:+36224188 None:intergenic
ATTCAGAGCTACCAACACCA+AGG 0.681533 8_2:+36222891 None:intergenic
AGGAAAGGGTCTGAGACAGG+AGG 0.683595 8_2:+36224821 None:intergenic
AAATGGTTGATAAGGAACAG+AGG 0.684433 8_2:-36222775 Msa1245940:CDS
GAATCCACACATGGAGACTG+CGG 0.686458 8_2:+36224566 None:intergenic
TTAGGAGTGACAGATTCACT+GGG 0.687144 8_2:+36224599 None:intergenic
AGGAGGATATGTCAAAGGGG+TGG 0.690825 8_2:+36224838 None:intergenic
GCAACAATGGCACTTCAGTG+TGG 0.692755 8_2:-36223431 Msa1245940:CDS
AAATCGTCTATTGATGACAA+GGG 0.693123 8_2:-36224149 Msa1245940:CDS
ACATTGATATCTATAATCCG+AGG 0.697429 8_2:+36222866 None:intergenic
AAACCTCTAAGTCAACAGAG+AGG 0.699177 8_2:+36223358 None:intergenic
TTGGGAGCAGAATCCACACA+TGG 0.699336 8_2:+36224557 None:intergenic
ACTGTGAAATCCCCTTACTG+GGG 0.699540 8_2:-36224347 Msa1245940:CDS
AGGTGACACTGAAATTGCAG+GGG 0.705414 8_2:+36222691 None:intergenic
GAATGGCATGTTTCACAAGG+GGG 0.707414 8_2:-36223958 Msa1245940:CDS
TCAGAGCTACCAACACCAAG+GGG 0.709272 8_2:+36222893 None:intergenic
GATGAGTAGGGATTGCATGG+AGG 0.713033 8_2:+36224230 None:intergenic
GGGAACGAAAAGATGCAGGA+CGG 0.713231 8_2:+36223725 None:intergenic
GAAATGCGAAAGTTTCCTAG+AGG 0.713272 8_2:+36224017 None:intergenic
ACACTCCACAACCATCACAA+CGG 0.720187 8_2:+36223934 None:intergenic
GTCCCTGTTAGTGATGACAA+GGG 0.724027 8_2:-36224173 Msa1245940:CDS
ATGTATCTACCAGGTAACTG+GGG 0.725191 8_2:+36223161 None:intergenic
AGGAACATTGAGATCAACCG+GGG 0.730566 8_2:+36224250 None:intergenic
CAGTCAATTGATGAACTCTG+CGG 0.730626 8_2:-36222314 Msa1245940:CDS
GACAGGAGGATATGTCAAAG+GGG 0.732984 8_2:+36224835 None:intergenic
GTATAAGGACCCAAACACGT+TGG 0.738449 8_2:+36223096 None:intergenic
GTGACACAGAAACAAACAGG+AGG 0.742203 8_2:-36221695 Msa1245940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATTTTTTATTATTA+CGG - chr8_2:36222076-36222095 Msa1245940:intron 0.0%
!!! ATTTAGTTTATTTTTTCATT+TGG - chr8_2:36225231-36225250 Msa1245940:intron 10.0%
!! AATTAATTAAGTAAATCAAA+AGG - chr8_2:36225277-36225296 Msa1245940:intron 10.0%
!! CAAAATAATGAAACATAAAT+TGG + chr8_2:36221611-36221630 None:intergenic 15.0%
!!! CAATTTATGTTTCATTATTT+TGG - chr8_2:36221609-36221628 Msa1245940:three_prime_UTR 15.0%
!!! GATTATATTGTTTTCAATAT+TGG - chr8_2:36221756-36221775 Msa1245940:intron 15.0%
!! TATCAAAACAATAAAACTAA+GGG + chr8_2:36221842-36221861 None:intergenic 15.0%
!! TTATCAAAACAATAAAACTA+AGG + chr8_2:36221843-36221862 None:intergenic 15.0%
!! TTACATCTTTACATATAAAA+TGG - chr8_2:36222252-36222271 Msa1245940:intron 15.0%
!! AACATAAATTGGAAAAAGAA+GGG + chr8_2:36221600-36221619 None:intergenic 20.0%
!! AAACATAAATTGGAAAAAGA+AGG + chr8_2:36221601-36221620 None:intergenic 20.0%
!!! GGTTCAATATTAGTTTATTA+GGG - chr8_2:36222097-36222116 Msa1245940:intron 20.0%
!!! GTTCAATATTAGTTTATTAG+GGG - chr8_2:36222098-36222117 Msa1245940:intron 20.0%
!! AAATAAATTCCAATGAAATG+TGG + chr8_2:36222197-36222216 None:intergenic 20.0%
!!! TATTTTAAAATGCTGCTTTT+AGG - chr8_2:36223600-36223619 Msa1245940:intron 20.0%
!!! ATTTTAAAATGCTGCTTTTA+GGG - chr8_2:36223601-36223620 Msa1245940:intron 20.0%
!! TTCAAACAAAATATCAGATA+GGG + chr8_2:36224203-36224222 None:intergenic 20.0%
!! ATTCAAACAAAATATCAGAT+AGG + chr8_2:36224204-36224223 None:intergenic 20.0%
!! TTTGAGTCAAAAATTTATAC+AGG + chr8_2:36224417-36224436 None:intergenic 20.0%
!! AAGAATATTCTTAAACCATT+AGG + chr8_2:36224453-36224472 None:intergenic 20.0%
!!! TTAATGTTTAAAATTGCACT+GGG + chr8_2:36225323-36225342 None:intergenic 20.0%
!!! TTTTACTTTTTGTTACAAGA+GGG + chr8_2:36225398-36225417 None:intergenic 20.0%
!!! ATTTTACTTTTTGTTACAAG+AGG + chr8_2:36225399-36225418 None:intergenic 20.0%
!! CTTGTAACAAAAAGTAAAAT+AGG - chr8_2:36225399-36225418 Msa1245940:intron 20.0%
!! TAAAGAATTTGTATCATAAC+AGG + chr8_2:36225441-36225460 None:intergenic 20.0%
!!! AGTACGAAATTTTATTGATT+AGG + chr8_2:36225489-36225508 None:intergenic 20.0%
!! AGATGTTATATATGTTTAGT+TGG - chr8_2:36225859-36225878 Msa1245940:intron 20.0%
!! AGCAAATTTTCATTCTGTTA+GGG - chr8_2:36221446-36221465 Msa1245940:three_prime_UTR 25.0%
! ACATAAATTGGAAAAAGAAG+GGG + chr8_2:36221599-36221618 None:intergenic 25.0%
!! TAATCGTTATGATTTTGTGA+CGG - chr8_2:36221711-36221730 Msa1245940:intron 25.0%
!!! TTGTTTTGATAATCAGAACA+AGG - chr8_2:36221851-36221870 Msa1245940:intron 25.0%
! TTTACTCCTAACATGATAAT+CGG - chr8_2:36221967-36221986 Msa1245940:intron 25.0%
! ATAAATCCGATTATCATGTT+AGG + chr8_2:36221976-36221995 None:intergenic 25.0%
! AACATGATAATCGGATTTAT+TGG - chr8_2:36221976-36221995 Msa1245940:intron 25.0%
!! CGGTTCAATATTAGTTTATT+AGG - chr8_2:36222096-36222115 Msa1245940:intron 25.0%
! ATCTTTACATATAAAATGGC+CGG - chr8_2:36222256-36222275 Msa1245940:intron 25.0%
! GTCATTTATTATTGCTTTAC+AGG - chr8_2:36222291-36222310 Msa1245940:CDS 25.0%
! CTTTAACAAAGTTTAGGAAA+GGG + chr8_2:36222648-36222667 None:intergenic 25.0%
!! TAGTTTTCTTTTCTGCATAA+TGG + chr8_2:36223647-36223666 None:intergenic 25.0%
! ATCATTTGCTTCAATGAAAT+GGG - chr8_2:36223677-36223696 Msa1245940:intron 25.0%
! TCAGATTGATTATATCAGAA+TGG - chr8_2:36223703-36223722 Msa1245940:CDS 25.0%
! TATTCAGATATGAACATCTT+GGG + chr8_2:36223751-36223770 None:intergenic 25.0%
!! TTTATACCTTCTCTCTTTTA+TGG - chr8_2:36223839-36223858 Msa1245940:intron 25.0%
!!! ATATTTTGTTTGAATATCCC+AGG - chr8_2:36224209-36224228 Msa1245940:CDS 25.0%
!! AAACACATTTTTCTTCCTAA+TGG - chr8_2:36224435-36224454 Msa1245940:CDS 25.0%
!! CTTAATGTTTAAAATTGCAC+TGG + chr8_2:36225324-36225343 None:intergenic 25.0%
!! TTATGAAAGTTGATCTCATA+AGG + chr8_2:36225539-36225558 None:intergenic 25.0%
! AATAAAAGCAACACATTCAT+TGG + chr8_2:36225643-36225662 None:intergenic 25.0%
!!! TGTTGCTTTTATTGTTCTTT+TGG - chr8_2:36225650-36225669 Msa1245940:intron 25.0%
! AATAAAAGCAACACATTCAT+TGG + chr8_2:36225643-36225662 None:intergenic 25.0%
!!! TTTTTTGCTTAATGACTGAT+GGG - chr8_2:36225715-36225734 Msa1245940:intron 25.0%
!! AAAATATAGTCTGAAGTCAT+AGG + chr8_2:36226051-36226070 None:intergenic 25.0%
! CAGCAAATTTTCATTCTGTT+AGG - chr8_2:36221445-36221464 Msa1245940:three_prime_UTR 30.0%
! ATTTTCATTCTGTTAGGGTT+AGG - chr8_2:36221451-36221470 Msa1245940:three_prime_UTR 30.0%
! TTTTCATTCTGTTAGGGTTA+GGG - chr8_2:36221452-36221471 Msa1245940:three_prime_UTR 30.0%
!!! ATTTTTGTTGTTTCATGCAC+TGG - chr8_2:36221652-36221671 Msa1245940:CDS 30.0%
AAATTGTTGAATTGCTAGTG+AGG - chr8_2:36221883-36221902 Msa1245940:intron 30.0%
!!! AATTTTTTTGCACTAGAACG+TGG - chr8_2:36221929-36221948 Msa1245940:intron 30.0%
!!! ATTTTTTTGCACTAGAACGT+GGG - chr8_2:36221930-36221949 Msa1245940:intron 30.0%
ATATTCTCAATCATGGGATA+AGG + chr8_2:36222049-36222068 None:intergenic 30.0%
TTATCCCATGATTGAGAATA+TGG - chr8_2:36222048-36222067 Msa1245940:intron 30.0%
CTATCCATATTCTCAATCAT+GGG + chr8_2:36222055-36222074 None:intergenic 30.0%
ACTATCCATATTCTCAATCA+TGG + chr8_2:36222056-36222075 None:intergenic 30.0%
! AGTTTATTAGGGGTATATGT+TGG - chr8_2:36222108-36222127 Msa1245940:intron 30.0%
TATATGTTGGATTGAAGACA+AGG - chr8_2:36222121-36222140 Msa1245940:intron 30.0%
AAATGACATGATATGAAGTC+CGG + chr8_2:36222278-36222297 None:intergenic 30.0%
TAATCGATTGGATCTTAACA+TGG - chr8_2:36222363-36222382 Msa1245940:CDS 30.0%
!! AACTTTGAGATATGTTGATG+AGG - chr8_2:36222441-36222460 Msa1245940:CDS 30.0%
GCTTTAACAAAGTTTAGGAA+AGG + chr8_2:36222649-36222668 None:intergenic 30.0%
! CATCAGCTTTAACAAAGTTT+AGG + chr8_2:36222654-36222673 None:intergenic 30.0%
TCTTTATTCGTCATTTGCAA+AGG - chr8_2:36222708-36222727 Msa1245940:CDS 30.0%
! GCTGATTCAATTTCCAAAAT+TGG - chr8_2:36222763-36222782 Msa1245940:CDS 30.0%
! TAGAATAGACTGTCCAATTT+TGG + chr8_2:36222779-36222798 None:intergenic 30.0%
!!! TTAGTTTTAACAACATTCCC+AGG + chr8_2:36222970-36222989 None:intergenic 30.0%
ATTGAATCAGTGGAATTAGA+GGG + chr8_2:36223066-36223085 None:intergenic 30.0%
AATTGAATCAGTGGAATTAG+AGG + chr8_2:36223067-36223086 None:intergenic 30.0%
! TAAATCGTCTATTGATGACA+AGG - chr8_2:36223302-36223321 Msa1245940:intron 30.0%
! AAATCGTCTATTGATGACAA+GGG - chr8_2:36223303-36223322 Msa1245940:intron 30.0%
! TTCTTGGTTGCATTGTTATT+AGG + chr8_2:36223342-36223361 None:intergenic 30.0%
TTCGCATTTCTCCATTTAAA+AGG - chr8_2:36223448-36223467 Msa1245940:CDS 30.0%
CATCATTTGCTTCAATGAAA+TGG - chr8_2:36223676-36223695 Msa1245940:intron 30.0%
ATTCAGATATGAACATCTTG+GGG + chr8_2:36223750-36223769 None:intergenic 30.0%
GTATTCAGATATGAACATCT+TGG + chr8_2:36223752-36223771 None:intergenic 30.0%
AAACGAGCTTACAAATTCTT+TGG + chr8_2:36223774-36223793 None:intergenic 30.0%
!!! AGAGGTCCTGTTTTAAAAAT+AGG + chr8_2:36223891-36223910 None:intergenic 30.0%
TTGGATGTTAATGTCATAGA+CGG - chr8_2:36223951-36223970 Msa1245940:CDS 30.0%
!! AATTTAATTAGCCTTTCCCT+AGG - chr8_2:36224149-36224168 Msa1245940:CDS 30.0%
ACATTGATATCTATAATCCG+AGG + chr8_2:36224589-36224608 None:intergenic 30.0%
TATCAATGTTCAACCTATTG+AGG - chr8_2:36224600-36224619 Msa1245940:CDS 30.0%
TGAAAAACATCATCCTCAAT+AGG + chr8_2:36224616-36224635 None:intergenic 30.0%
TTATCAACCATTTGATTCAC+AGG + chr8_2:36224670-36224689 None:intergenic 30.0%
! TGTGAATCAAATGGTTGATA+AGG - chr8_2:36224669-36224688 Msa1245940:CDS 30.0%
!!! TACGCTTCATGTTTTAATTG+TGG + chr8_2:36225366-36225385 None:intergenic 30.0%
!!! GTGTTGCTTTTATTGTTTTG+TGG - chr8_2:36225688-36225707 Msa1245940:intron 30.0%
!!! CTTTTTTGCTTAATGACTGA+TGG - chr8_2:36225714-36225733 Msa1245940:intron 30.0%
! TTTTTGCTTAATGACTGATG+GGG - chr8_2:36225716-36225735 Msa1245940:intron 30.0%
GTTGTTATGGATTTACTCAA+TGG - chr8_2:36225813-36225832 Msa1245940:intron 30.0%
!!! GAGAGTAGGTTTTAATTACA+TGG - chr8_2:36225835-36225854 Msa1245940:intron 30.0%
CATTCATGAGAAAAAAAGGT+TGG + chr8_2:36226120-36226139 None:intergenic 30.0%
GCTATTAACGCTAAATGAAG+CGG + chr8_2:36221368-36221387 None:intergenic 35.0%
GCTTCATTTAGCGTTAATAG+CGG - chr8_2:36221367-36221386 Msa1245940:three_prime_UTR 35.0%
AGAATCCATAGATACGAAGA+AGG + chr8_2:36221540-36221559 None:intergenic 35.0%
! GGTTAATTAGGTTTTGCATG+TGG - chr8_2:36221679-36221698 Msa1245940:CDS 35.0%
! ACACTCCTAATTGAAGGTTT+TGG - chr8_2:36222014-36222033 Msa1245940:intron 35.0%
CCTAACCAAAACCTTCAATT+AGG + chr8_2:36222022-36222041 None:intergenic 35.0%
!!! CCTAATTGAAGGTTTTGGTT+AGG - chr8_2:36222019-36222038 Msa1245940:intron 35.0%
!! AAGGATCCAGTAGGTTTTAT+TGG - chr8_2:36222140-36222159 Msa1245940:intron 35.0%
ATCACACCAATAAAACCTAC+TGG + chr8_2:36222149-36222168 None:intergenic 35.0%
GATGTCTATCCACATTTCAT+TGG - chr8_2:36222185-36222204 Msa1245940:intron 35.0%
ATTGCTTTACAGGCGAAATA+TGG - chr8_2:36222301-36222320 Msa1245940:CDS 35.0%
TGTGGATGAGAATAATCGAT+TGG - chr8_2:36222351-36222370 Msa1245940:CDS 35.0%
! TTGAGATATGTTGATGAGGA+TGG - chr8_2:36222445-36222464 Msa1245940:CDS 35.0%
TGTTTCAAATTCTGTGCTAC+AGG - chr8_2:36222990-36223009 Msa1245940:intron 35.0%
AGTTTGGGAAATTGAATCAG+TGG + chr8_2:36223076-36223095 None:intergenic 35.0%
! ACTGATTCAATTTCCCAAAC+TGG - chr8_2:36223075-36223094 Msa1245940:intron 35.0%
! ACAGGTTGAGTCTAAAATTG+CGG - chr8_2:36223173-36223192 Msa1245940:CDS 35.0%
! TTTACGTTAGTGGATGAGTA+GGG + chr8_2:36223237-36223256 None:intergenic 35.0%
! ATTTACGTTAGTGGATGAGT+AGG + chr8_2:36223238-36223257 None:intergenic 35.0%
TGGTACTCTATTTACGTTAG+TGG + chr8_2:36223247-36223266 None:intergenic 35.0%
!! CTATTGACTGTCCATTTTCT+GGG - chr8_2:36223385-36223404 Msa1245940:CDS 35.0%
ATTGAATGGCATGTTTCACA+AGG - chr8_2:36223491-36223510 Msa1245940:CDS 35.0%
TTGAATGGCATGTTTCACAA+GGG - chr8_2:36223492-36223511 Msa1245940:CDS 35.0%
! AAAGAAGTGTACTCACACTT+TGG + chr8_2:36223571-36223590 None:intergenic 35.0%
! AAAATAGGTGGTGGTATCTT+TGG + chr8_2:36223876-36223895 None:intergenic 35.0%
!!! CCTGTTTTAAAAATAGGTGG+TGG + chr8_2:36223885-36223904 None:intergenic 35.0%
!!! CCACCACCTATTTTTAAAAC+AGG - chr8_2:36223882-36223901 Msa1245940:intron 35.0%
!!! GGTCCTGTTTTAAAAATAGG+TGG + chr8_2:36223888-36223907 None:intergenic 35.0%
CAAAGTCTAAGCTAGATAGT+CGG - chr8_2:36223922-36223941 Msa1245940:CDS 35.0%
ATCTTTGTGAATGCAGTAGA+TGG + chr8_2:36223990-36224009 None:intergenic 35.0%
CAACAGGTAAAACAAACCTA+GGG + chr8_2:36224168-36224187 None:intergenic 35.0%
TCAACAGGTAAAACAAACCT+AGG + chr8_2:36224169-36224188 None:intergenic 35.0%
TATGTATCTACCAGGTAACT+GGG + chr8_2:36224295-36224314 None:intergenic 35.0%
ATATGTATCTACCAGGTAAC+TGG + chr8_2:36224296-36224315 None:intergenic 35.0%
CAGTATGATATGTATCTACC+AGG + chr8_2:36224303-36224322 None:intergenic 35.0%
CTGGTAGATACATATCATAC+TGG - chr8_2:36224301-36224320 Msa1245940:CDS 35.0%
GTAGATACATATCATACTGG+AGG - chr8_2:36224304-36224323 Msa1245940:CDS 35.0%
ATACATATCATACTGGAGGA+TGG - chr8_2:36224308-36224327 Msa1245940:CDS 35.0%
TCTCTCTCTGGACATAAATT+TGG - chr8_2:36224333-36224352 Msa1245940:CDS 35.0%
ATAAATTTGGCCAACGTGTT+TGG - chr8_2:36224346-36224365 Msa1245940:CDS 35.0%
TAAATTTGGCCAACGTGTTT+GGG - chr8_2:36224347-36224366 Msa1245940:CDS 35.0%
!! TCAAGTATGATAGTGGAAGA+GGG + chr8_2:36224477-36224496 None:intergenic 35.0%
!! TTCAAGTATGATAGTGGAAG+AGG + chr8_2:36224478-36224497 None:intergenic 35.0%
TCTTCCACTATCATACTTGA+AGG - chr8_2:36224477-36224496 Msa1245940:CDS 35.0%
! TCATTTTATGATAGCTCGCA+AGG - chr8_2:36224520-36224539 Msa1245940:CDS 35.0%
!! AAATGGTTGATAAGGAACAG+AGG - chr8_2:36224677-36224696 Msa1245940:CDS 35.0%
ACAAAGGTAGCTTCATTTGT+AGG + chr8_2:36224724-36224743 None:intergenic 35.0%
ACAAATGAAGCTACCTTTGT+CGG - chr8_2:36224724-36224743 Msa1245940:CDS 35.0%
!! TACCCCATTATTGATTTCTC+TGG - chr8_2:36224796-36224815 Msa1245940:CDS 35.0%
TGCCAGAGAAATCAATAATG+GGG + chr8_2:36224801-36224820 None:intergenic 35.0%
GTGCCAGAGAAATCAATAAT+GGG + chr8_2:36224802-36224821 None:intergenic 35.0%
TGTGCCAGAGAAATCAATAA+TGG + chr8_2:36224803-36224822 None:intergenic 35.0%
AAGCACAGATAATGATCTTG+TGG - chr8_2:36225023-36225042 Msa1245940:CDS 35.0%
AGATAATGATCTTGTGGAAG+AGG - chr8_2:36225029-36225048 Msa1245940:CDS 35.0%
!! GCAGGTTGATTTAAACAAAG+AGG - chr8_2:36225086-36225105 Msa1245940:CDS 35.0%
GAGAATGACAGATTACAATC+TGG - chr8_2:36225113-36225132 Msa1245940:CDS 35.0%
! AAGCATCAAACGTGTTGTTA+TGG - chr8_2:36225800-36225819 Msa1245940:intron 35.0%
AACACTAAATAATCGCTGCT+AGG - chr8_2:36225898-36225917 Msa1245940:intron 35.0%
CCACAAAAAAAGATCAAGCA+AGG + chr8_2:36225946-36225965 None:intergenic 35.0%
!!! CCTTGCTTGATCTTTTTTTG+TGG - chr8_2:36225943-36225962 Msa1245940:five_prime_UTR 35.0%
GGTTGCAAATCAAGATAGAA+TGG + chr8_2:36226099-36226118 None:intergenic 35.0%
! AAGAAGAAGCTTTAGCGTAC+CGG + chr8_2:36221397-36221416 None:intergenic 40.0%
GCTTTCCTTCTTCGTATCTA+TGG - chr8_2:36221532-36221551 Msa1245940:three_prime_UTR 40.0%
GGATTCTTCTCTCGTTATCA+AGG - chr8_2:36221553-36221572 Msa1245940:three_prime_UTR 40.0%
AGGGGAAAATTGAGATCGAT+CGG + chr8_2:36221581-36221600 None:intergenic 40.0%
!! TGCACTGGTTGTGGTTAATT+AGG - chr8_2:36221667-36221686 Msa1245940:CDS 40.0%
TCATGCACACTCCTAATTGA+AGG - chr8_2:36222008-36222027 Msa1245940:intron 40.0%
ATTGAAGACAAGGATCCAGT+AGG - chr8_2:36222131-36222150 Msa1245940:intron 40.0%
GATTGGATCTTAACATGGCT+GGG - chr8_2:36222368-36222387 Msa1245940:CDS 40.0%
AAGTTAGATTCGCATCAGCA+GGG + chr8_2:36222426-36222445 None:intergenic 40.0%
AAAGTTAGATTCGCATCAGC+AGG + chr8_2:36222427-36222446 None:intergenic 40.0%
GTCCAGATGATCAATCATTC+TGG - chr8_2:36222544-36222563 Msa1245940:CDS 40.0%
CACCAGAATGATTGATCATC+TGG + chr8_2:36222549-36222568 None:intergenic 40.0%
AGACAGGAGGATATGTCAAA+GGG + chr8_2:36222621-36222640 None:intergenic 40.0%
! TCAGCAATATTTGCTAGCAC+TGG + chr8_2:36222748-36222767 None:intergenic 40.0%
CAGTCTATTCTAAACCCTCA+AGG - chr8_2:36222787-36222806 Msa1245940:CDS 40.0%
GGTGGTACAAGCTCAAAAAA+CGG - chr8_2:36222826-36222845 Msa1245940:CDS 40.0%
TTAGGAGTGACAGATTCACT+GGG + chr8_2:36222856-36222875 None:intergenic 40.0%
TTTAGGAGTGACAGATTCAC+TGG + chr8_2:36222857-36222876 None:intergenic 40.0%
TCTGTCACTCCTAAAGCAAA+AGG - chr8_2:36222862-36222881 Msa1245940:CDS 40.0%
ACTAGATCTAGCATAGTCAC+TGG + chr8_2:36222923-36222942 None:intergenic 40.0%
AGTGACTATGCTAGATCTAG+TGG - chr8_2:36222922-36222941 Msa1245940:CDS 40.0%
ACATTCCCAGGAGATCTTAA+GGG + chr8_2:36222958-36222977 None:intergenic 40.0%
AACATTCCCAGGAGATCTTA+AGG + chr8_2:36222959-36222978 None:intergenic 40.0%
TTCAAATTCTGTGCTACAGG+AGG - chr8_2:36222993-36223012 Msa1245940:intron 40.0%
CACAGTAGATTGTCCAGTTT+GGG + chr8_2:36223091-36223110 None:intergenic 40.0%
TCACAGTAGATTGTCCAGTT+TGG + chr8_2:36223092-36223111 None:intergenic 40.0%
TACTGTGAAATCCCCTTACT+GGG - chr8_2:36223104-36223123 Msa1245940:CDS 40.0%
! CAGGTTGAGTCTAAAATTGC+GGG - chr8_2:36223174-36223193 Msa1245940:CDS 40.0%
TACCCTTGTCATCACTAACA+GGG + chr8_2:36223284-36223303 None:intergenic 40.0%
TTACCCTTGTCATCACTAAC+AGG + chr8_2:36223285-36223304 None:intergenic 40.0%
GAAACCTAAAGTAGGGTTCT+TGG + chr8_2:36223358-36223377 None:intergenic 40.0%
!! GAGCACTGAAACCTAAAGTA+GGG + chr8_2:36223365-36223384 None:intergenic 40.0%
CCAGAAAATGGACAGTCAAT+AGG + chr8_2:36223387-36223406 None:intergenic 40.0%
!! CCTATTGACTGTCCATTTTC+TGG - chr8_2:36223384-36223403 Msa1245940:CDS 40.0%
AGAGTATGTGTCCCAGAAAA+TGG + chr8_2:36223399-36223418 None:intergenic 40.0%
GAAATGCGAAAGTTTCCTAG+AGG + chr8_2:36223438-36223457 None:intergenic 40.0%
TGAATGGCATGTTTCACAAG+GGG - chr8_2:36223493-36223512 Msa1245940:CDS 40.0%
TGTGGAGTGTATCCAATAAC+CGG - chr8_2:36223531-36223550 Msa1245940:CDS 40.0%
! TTTGGATTTGAAACGAGGTC+CGG + chr8_2:36223553-36223572 None:intergenic 40.0%
! CACACTTTGGATTTGAAACG+AGG + chr8_2:36223558-36223577 None:intergenic 40.0%
TCTGCACCATAAAAGAGAGA+AGG + chr8_2:36223848-36223867 None:intergenic 40.0%
!! GCTAGATAGTCGGTTCATTT+TGG - chr8_2:36223932-36223951 Msa1245940:CDS 40.0%
TGTCATAGACGGAACAATGA+TGG - chr8_2:36223962-36223981 Msa1245940:CDS 40.0%
CTACTGCATTCACAAAGATC+TGG - chr8_2:36223991-36224010 Msa1245940:CDS 40.0%
! CAAACAAGTTGAGTTCCCTT+GGG + chr8_2:36224047-36224066 None:intergenic 40.0%
! GGAACTCAACTTGTTTGGAT+TGG - chr8_2:36224050-36224069 Msa1245940:CDS 40.0%
! ACTCAACTTGTTTGGATTGG+AGG - chr8_2:36224053-36224072 Msa1245940:CDS 40.0%
AACCTCTAAGTCAACAGAGA+GGG + chr8_2:36224096-36224115 None:intergenic 40.0%
AAACCTCTAAGTCAACAGAG+AGG + chr8_2:36224097-36224116 None:intergenic 40.0%
GGTAAAACAAACCTAGGGAA+AGG + chr8_2:36224163-36224182 None:intergenic 40.0%
! AGGGTATTCAGAAGATCAAC+AGG + chr8_2:36224184-36224203 None:intergenic 40.0%
ATGTATCTACCAGGTAACTG+GGG + chr8_2:36224294-36224313 None:intergenic 40.0%
ACTGTCATCCTACCTGTATA+AGG + chr8_2:36224374-36224393 None:intergenic 40.0%
TCGACCTTCAAGTATGATAG+TGG + chr8_2:36224484-36224503 None:intergenic 40.0%
CTGAACTTGAATATTCCCCT+TGG - chr8_2:36224544-36224563 Msa1245940:CDS 40.0%
! TTGAATATTCCCCTTGGTGT+TGG - chr8_2:36224550-36224569 Msa1245940:CDS 40.0%
ATTTGATTCACAGGTTCAGG+TGG + chr8_2:36224661-36224680 None:intergenic 40.0%
ACCTGAACCTGTGAATCAAA+TGG - chr8_2:36224660-36224679 Msa1245940:CDS 40.0%
ACCATTTGATTCACAGGTTC+AGG + chr8_2:36224664-36224683 None:intergenic 40.0%
AAGGTGACACTGAAATTGCA+GGG + chr8_2:36224765-36224784 None:intergenic 40.0%
ATGGGGTAAGAAATAGACGA+AGG + chr8_2:36224784-36224803 None:intergenic 40.0%
CTTAAAGAGCTTGAGGCTAT+GGG - chr8_2:36225057-36225076 Msa1245940:CDS 40.0%
CAGTCAATTGATGAACTCTG+CGG - chr8_2:36225138-36225157 Msa1245940:CDS 40.0%
ATACCGTGACAGTGTGTTAT+TGG + chr8_2:36225565-36225584 None:intergenic 40.0%
AGGTGATGATAGGGATGAAA+TGG + chr8_2:36225602-36225621 None:intergenic 40.0%
CAGCAAAGTAGGTGATGATA+GGG + chr8_2:36225611-36225630 None:intergenic 40.0%
GGATTATGAAGCAGCAAAGT+AGG + chr8_2:36225622-36225641 None:intergenic 40.0%
! ACTGATGGGGTATTAATGCA+GGG - chr8_2:36225729-36225748 Msa1245940:intron 40.0%
!! TCCTGTTTGTTTCTGTGTCA+CGG + chr8_2:36225758-36225777 None:intergenic 40.0%
AGGCTACTGATGAAAAACGA+TGG - chr8_2:36225777-36225796 Msa1245940:intron 40.0%
GGATTTACTCAATGGAGAGT+AGG - chr8_2:36225821-36225840 Msa1245940:intron 40.0%
ACGAAGAAGGAAAGCGAAGA+AGG + chr8_2:36221527-36221546 None:intergenic 45.0%
!! GTTGTTTCATGCACTGGTTG+TGG - chr8_2:36221658-36221677 Msa1245940:CDS 45.0%
AATTGCTAGTGAGGCATGCT+GGG - chr8_2:36221892-36221911 Msa1245940:intron 45.0%
CGATTGGATCTTAACATGGC+TGG - chr8_2:36222367-36222386 Msa1245940:CDS 45.0%
ATCTTAACATGGCTGGGTTG+AGG - chr8_2:36222374-36222393 Msa1245940:CDS 45.0%
! TCTTAACATGGCTGGGTTGA+GGG - chr8_2:36222375-36222394 Msa1245940:CDS 45.0%
! TCTGGTGCTAAATCTGATGC+TGG - chr8_2:36222562-36222581 Msa1245940:CDS 45.0%
GACAGGAGGATATGTCAAAG+GGG + chr8_2:36222620-36222639 None:intergenic 45.0%
GAGACAGGAGGATATGTCAA+AGG + chr8_2:36222622-36222641 None:intergenic 45.0%
! TTTAGGAAAGGGTCTGAGAC+AGG + chr8_2:36222637-36222656 None:intergenic 45.0%
GAATAAAGAGCCTCGCGTAT+TGG + chr8_2:36222697-36222716 None:intergenic 45.0%
CTAGCATAGTCACTGGCATT+GGG + chr8_2:36222916-36222935 None:intergenic 45.0%
TCTAGCATAGTCACTGGCAT+TGG + chr8_2:36222917-36222936 None:intergenic 45.0%
CATTCCCAGGAGATCTTAAG+GGG + chr8_2:36222957-36222976 None:intergenic 45.0%
CTACTGTGAAATCCCCTTAC+TGG - chr8_2:36223103-36223122 Msa1245940:CDS 45.0%
ACTGTGAAATCCCCTTACTG+GGG - chr8_2:36223105-36223124 Msa1245940:CDS 45.0%
CTTGTACCAATTGCAACAGG+AGG + chr8_2:36223132-36223151 None:intergenic 45.0%
GAGCTTGTACCAATTGCAAC+AGG + chr8_2:36223135-36223154 None:intergenic 45.0%
AAAAAACGATGCCAGTCGAC+AGG - chr8_2:36223155-36223174 Msa1245940:CDS 45.0%
TTTAGACTCAACCTGTCGAC+TGG + chr8_2:36223169-36223188 None:intergenic 45.0%
TAAAATTGCGGGAGTTTCCC+CGG - chr8_2:36223185-36223204 Msa1245940:CDS 45.0%
AGGAACATTGAGATCAACCG+GGG + chr8_2:36223205-36223224 None:intergenic 45.0%
GAGGAACATTGAGATCAACC+GGG + chr8_2:36223206-36223225 None:intergenic 45.0%
GGAGGAACATTGAGATCAAC+CGG + chr8_2:36223207-36223226 None:intergenic 45.0%
AGTCCCTGTTAGTGATGACA+AGG - chr8_2:36223278-36223297 Msa1245940:intron 45.0%
GTCCCTGTTAGTGATGACAA+GGG - chr8_2:36223279-36223298 Msa1245940:intron 45.0%
GCAACCAAGAACCCTACTTT+AGG - chr8_2:36223351-36223370 Msa1245940:intron 45.0%
!! GGAGCACTGAAACCTAAAGT+AGG + chr8_2:36223366-36223385 None:intergenic 45.0%
ATGCGAAAGTTTCCTAGAGG+AGG + chr8_2:36223435-36223454 None:intergenic 45.0%
! TGAGCGTGGCTCCTTTTAAA+TGG + chr8_2:36223462-36223481 None:intergenic 45.0%
GCTCACTCTGATGCATTGAA+TGG - chr8_2:36223477-36223496 Msa1245940:CDS 45.0%
GAATGGCATGTTTCACAAGG+GGG - chr8_2:36223494-36223513 Msa1245940:CDS 45.0%
ACACTCCACAACCATCACAA+CGG + chr8_2:36223521-36223540 None:intergenic 45.0%
TTGAAACGAGGTCCGGTTAT+TGG + chr8_2:36223546-36223565 None:intergenic 45.0%
GACTTTGCATGCTTCGAAAG+AGG + chr8_2:36223909-36223928 None:intergenic 45.0%
CTGCATTCACAAAGATCTGG+CGG - chr8_2:36223994-36224013 Msa1245940:CDS 45.0%
! CCAAACAAGTTGAGTTCCCT+TGG + chr8_2:36224048-36224067 None:intergenic 45.0%
! CCAAGGGAACTCAACTTGTT+TGG - chr8_2:36224045-36224064 Msa1245940:CDS 45.0%
TTGAATATCCCAGGTTCCTG+AGG - chr8_2:36224218-36224237 Msa1245940:CDS 45.0%
ACGTCAAGCTCTTTCTCTAC+AGG + chr8_2:36224252-36224271 None:intergenic 45.0%
GTATAAGGACCCAAACACGT+TGG + chr8_2:36224359-36224378 None:intergenic 45.0%
ACGTGTTTGGGTCCTTATAC+AGG - chr8_2:36224359-36224378 Msa1245940:CDS 45.0%
GTTTGGGTCCTTATACAGGT+AGG - chr8_2:36224363-36224382 Msa1245940:CDS 45.0%
TTCAGAGCTACCAACACCAA+GGG + chr8_2:36224563-36224582 None:intergenic 45.0%
ATTCAGAGCTACCAACACCA+AGG + chr8_2:36224564-36224583 None:intergenic 45.0%
!! TTGGTGTTGGTAGCTCTGAA+TGG - chr8_2:36224563-36224582 Msa1245940:CDS 45.0%
!!! AGGTGGAGCATTGGGATTTT+GGG + chr8_2:36224644-36224663 None:intergenic 45.0%
TAAGGAACAGAGGCAGGAAT+TGG - chr8_2:36224687-36224706 Msa1245940:CDS 45.0%
AAGGAACAGAGGCAGGAATT+GGG - chr8_2:36224688-36224707 Msa1245940:CDS 45.0%
AGGTGACACTGAAATTGCAG+GGG + chr8_2:36224764-36224783 None:intergenic 45.0%
GAAGGTGACACTGAAATTGC+AGG + chr8_2:36224766-36224785 None:intergenic 45.0%
TTGAAGTTTGCGGAATGGCT+GGG + chr8_2:36224978-36224997 None:intergenic 45.0%
CAGAGTTGAAGTTTGCGGAA+TGG + chr8_2:36224983-36225002 None:intergenic 45.0%
CATTCCGCAAACTTCAACTC+TGG - chr8_2:36224981-36225000 Msa1245940:CDS 45.0%
GCATCCAGAGTTGAAGTTTG+CGG + chr8_2:36224988-36225007 None:intergenic 45.0%
CCATAGCCTCAAGCTCTTTA+AGG + chr8_2:36225059-36225078 None:intergenic 45.0%
CCTTAAAGAGCTTGAGGCTA+TGG - chr8_2:36225056-36225075 Msa1245940:CDS 45.0%
AACTCTGCGGTGTTCTTGAT+TGG - chr8_2:36225151-36225170 Msa1245940:intron 45.0%
ACTCTGCGGTGTTCTTGATT+GGG - chr8_2:36225152-36225171 Msa1245940:intron 45.0%
GTGCCAATAACACACTGTCA+CGG - chr8_2:36225559-36225578 Msa1245940:intron 45.0%
ATGAAATGGAGCACACGGAT+TGG + chr8_2:36225588-36225607 None:intergenic 45.0%
TAGGGATGAAATGGAGCACA+CGG + chr8_2:36225593-36225612 None:intergenic 45.0%
GCAGCAAAGTAGGTGATGAT+AGG + chr8_2:36225612-36225631 None:intergenic 45.0%
! GACTGATGGGGTATTAATGC+AGG - chr8_2:36225728-36225747 Msa1245940:intron 45.0%
TCCGTGACACAGAAACAAAC+AGG - chr8_2:36225754-36225773 Msa1245940:intron 45.0%
GTGACACAGAAACAAACAGG+AGG - chr8_2:36225757-36225776 Msa1245940:intron 45.0%
TAGCGTTAATAGCGGCTCAC+CGG - chr8_2:36221375-36221394 Msa1245940:three_prime_UTR 50.0%
GAATTGCTAGTGAGGCATGC+TGG - chr8_2:36221891-36221910 Msa1245940:intron 50.0%
CGAAATATGGAGATGCCCTC+AGG - chr8_2:36222314-36222333 Msa1245940:CDS 50.0%
! ACGAACATTGAAGCGCCTGA+GGG + chr8_2:36222332-36222351 None:intergenic 50.0%
! TGTTGATGAGGATGGCGACT+TGG - chr8_2:36222453-36222472 Msa1245940:CDS 50.0%
!! TGGCGACTTGGTGAATCTTG+TGG - chr8_2:36222465-36222484 Msa1245940:CDS 50.0%
GGTGCTAAATCTGATGCTGG+TGG - chr8_2:36222565-36222584 Msa1245940:CDS 50.0%
AGGAGGATATGTCAAAGGGG+TGG + chr8_2:36222617-36222636 None:intergenic 50.0%
TGATGCTTTGCAAGCTCTGC+CGG - chr8_2:36222669-36222688 Msa1245940:CDS 50.0%
!! CAACGTGAGATTGGCCTTGA+GGG + chr8_2:36222804-36222823 None:intergenic 50.0%
TACCACCAGCAACGTGAGAT+TGG + chr8_2:36222813-36222832 None:intergenic 50.0%
! GACTGCGGACCTTTTGCTTT+AGG + chr8_2:36222874-36222893 None:intergenic 50.0%
GAATCCACACATGGAGACTG+CGG + chr8_2:36222889-36222908 None:intergenic 50.0%
TTGGGAGCAGAATCCACACA+TGG + chr8_2:36222898-36222917 None:intergenic 50.0%
CCATCCCCTTAAGATCTCCT+GGG - chr8_2:36222950-36222969 Msa1245940:CDS 50.0%
GGAACTTGTCTCGAAGATGC+AGG + chr8_2:36223045-36223064 None:intergenic 50.0%
CTGTGAAATCCCCTTACTGG+GGG - chr8_2:36223106-36223125 Msa1245940:CDS 50.0%
GATGAGTAGGGATTGCATGG+AGG + chr8_2:36223225-36223244 None:intergenic 50.0%
GTGGATGAGTAGGGATTGCA+TGG + chr8_2:36223228-36223247 None:intergenic 50.0%
CTAACAGGGACTGCTGATGA+AGG + chr8_2:36223270-36223289 None:intergenic 50.0%
CATTCAATGCCACCTCCTCT+AGG - chr8_2:36223420-36223439 Msa1245940:CDS 50.0%
CGAAAGTTTCCTAGAGGAGG+TGG + chr8_2:36223432-36223451 None:intergenic 50.0%
TCAATGCATCAGAGTGAGCG+TGG + chr8_2:36223476-36223495 None:intergenic 50.0%
GGGAACGAAAAGATGCAGGA+CGG + chr8_2:36223730-36223749 None:intergenic 50.0%
CTTGGGGAACGAAAAGATGC+AGG + chr8_2:36223734-36223753 None:intergenic 50.0%
GCAACAATGGCACTTCAGTG+TGG - chr8_2:36224021-36224040 Msa1245940:CDS 50.0%
!! CTCCCTCTCTGTTGACTTAG+AGG - chr8_2:36224091-36224110 Msa1245940:CDS 50.0%
ATATCCCAGGTTCCTGAGGA+CGG - chr8_2:36224222-36224241 Msa1245940:CDS 50.0%
GAAGGTCGATGCATCTCTCA+AGG - chr8_2:36224495-36224514 Msa1245940:CDS 50.0%
TCAGAGCTACCAACACCAAG+GGG + chr8_2:36224562-36224581 None:intergenic 50.0%
!! TTGGTAGCTCTGAATGGCCT+CGG - chr8_2:36224569-36224588 Msa1245940:CDS 50.0%
!!! GGTGGAGCATTGGGATTTTG+GGG + chr8_2:36224643-36224662 None:intergenic 50.0%
!!! CAGGTGGAGCATTGGGATTT+TGG + chr8_2:36224645-36224664 None:intergenic 50.0%
! ACAGGTTCAGGTGGAGCATT+GGG + chr8_2:36224652-36224671 None:intergenic 50.0%
!! GGTTGATAAGGAACAGAGGC+AGG - chr8_2:36224681-36224700 Msa1245940:CDS 50.0%
TGAAGTTTGCGGAATGGCTG+GGG + chr8_2:36224977-36224996 None:intergenic 50.0%
GTTGAAGTTTGCGGAATGGC+TGG + chr8_2:36224979-36224998 None:intergenic 50.0%
GGCTCTCCTTAAAGAGCTTG+AGG - chr8_2:36225050-36225069 Msa1245940:CDS 50.0%
TGAGGCTATGGGTTTCAAGC+AGG - chr8_2:36225068-36225087 Msa1245940:CDS 50.0%
TCGTGTAGCTCTTCAAGGAG+AGG + chr8_2:36225180-36225199 None:intergenic 50.0%
CCATCTCGTGTAGCTCTTCA+AGG + chr8_2:36225185-36225204 None:intergenic 50.0%
CCTTGAAGAGCTACACGAGA+TGG - chr8_2:36225182-36225201 Msa1245940:intron 50.0%
! CACGAACATTGAAGCGCCTG+AGG + chr8_2:36222333-36222352 None:intergenic 55.0%
CAGGCGCTTCAATGTTCGTG+TGG - chr8_2:36222333-36222352 Msa1245940:CDS 55.0%
!! TCTGATGCTGGTGGCTCTAG+TGG - chr8_2:36222574-36222593 Msa1245940:CDS 55.0%
! AGGAAAGGGTCTGAGACAGG+AGG + chr8_2:36222634-36222653 None:intergenic 55.0%
!! GCAACGTGAGATTGGCCTTG+AGG + chr8_2:36222805-36222824 None:intergenic 55.0%
CAAGGCCAATCTCACGTTGC+TGG - chr8_2:36222805-36222824 Msa1245940:CDS 55.0%
GCCATCCCCTTAAGATCTCC+TGG - chr8_2:36222949-36222968 Msa1245940:CDS 55.0%
CCCAGGAGATCTTAAGGGGA+TGG + chr8_2:36222953-36222972 None:intergenic 55.0%
ACAGGGACTGCTGATGAAGG+TGG + chr8_2:36223267-36223286 None:intergenic 55.0%
! ATCTGGCGGATGCGCAACAA+TGG - chr8_2:36224008-36224027 Msa1245940:CDS 55.0%
TACACCGTCCTCAGGAACCT+GGG + chr8_2:36224229-36224248 None:intergenic 55.0%
TCTACAGGTACACCGTCCTC+AGG + chr8_2:36224237-36224256 None:intergenic 55.0%
! TTTAGAGCGCCCCAGTTACC+TGG - chr8_2:36224282-36224301 Msa1245940:CDS 55.0%
TGGAGGATGGCATCTCTCTC+TGG - chr8_2:36224321-36224340 Msa1245940:CDS 55.0%
CACAGGTTCAGGTGGAGCAT+TGG + chr8_2:36224653-36224672 None:intergenic 55.0%
TGAAATTGCAGGGGCTGAGG+CGG + chr8_2:36224755-36224774 None:intergenic 55.0%
CACTGAAATTGCAGGGGCTG+AGG + chr8_2:36224758-36224777 None:intergenic 55.0%
AGAGAAAGAGGGAGCAGCTG+GGG + chr8_2:36224827-36224846 None:intergenic 55.0%
CAGAGAAAGAGGGAGCAGCT+GGG + chr8_2:36224828-36224847 None:intergenic 55.0%
GGGGATGTGCCAGAGAAAGA+GGG + chr8_2:36224898-36224917 None:intergenic 55.0%
CTCTTTCTCTGGCACATCCC+CGG - chr8_2:36224897-36224916 Msa1245940:CDS 55.0%
GGGGATGTGCCAGAGAAAGA+GGG + chr8_2:36224898-36224917 None:intergenic 55.0%
CTCTTTCTCTGGCACATCCC+CGG - chr8_2:36224897-36224916 Msa1245940:CDS 55.0%
!! GATGCTGGTGGCTCTAGTGG+AGG - chr8_2:36222577-36222596 Msa1245940:CDS 60.0%
!! GGCTCTAGTGGAGGTGCTAG+TGG - chr8_2:36222586-36222605 Msa1245940:CDS 60.0%
!! AGAGCCTCGCGTATTGGCTC+CGG + chr8_2:36222691-36222710 None:intergenic 60.0%
GGCCAATCTCACGTTGCTGG+TGG - chr8_2:36222808-36222827 Msa1245940:CDS 60.0%
AGGTCCGCAGTCTCCATGTG+TGG - chr8_2:36222882-36222901 Msa1245940:CDS 60.0%
AACAGGAGGCCCCCAGTAAG+GGG + chr8_2:36223118-36223137 None:intergenic 60.0%
CAACAGGAGGCCCCCAGTAA+GGG + chr8_2:36223119-36223138 None:intergenic 60.0%
TGGGGGCCTCCTGTTGCAAT+TGG - chr8_2:36223123-36223142 Msa1245940:CDS 60.0%
CACAAGGGGGTCCGTTGTGA+TGG - chr8_2:36223507-36223526 Msa1245940:CDS 60.0%
GGGGTCCGTTGTGATGGTTG+TGG - chr8_2:36223513-36223532 Msa1245940:CDS 60.0%
TGGCACTTCAGTGTGGCCCA+AGG - chr8_2:36224028-36224047 Msa1245940:CDS 60.0%
GGCACTTCAGTGTGGCCCAA+GGG - chr8_2:36224029-36224048 Msa1245940:CDS 60.0%
GTACACCGTCCTCAGGAACC+TGG + chr8_2:36224230-36224249 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+TGG + chr8_2:36224829-36224848 None:intergenic 60.0%
CCAGCTGCTCCCTCTTTCTC+TGG - chr8_2:36224826-36224845 Msa1245940:CDS 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:36224857-36224876 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:36224858-36224877 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:36224829-36224848 None:intergenic 60.0%
GGGGCTGTGCCAGAGAAAGA+GGG + chr8_2:36224868-36224887 None:intergenic 60.0%
CTCTTTCTCTGGCACAGCCC+CGG - chr8_2:36224867-36224886 Msa1245940:CDS 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:36224857-36224876 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:36224858-36224877 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:36224829-36224848 None:intergenic 60.0%
CGGGGATGTGCCAGAGAAAG+AGG + chr8_2:36224899-36224918 None:intergenic 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:36224857-36224876 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:36224858-36224877 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:36224829-36224848 None:intergenic 60.0%
CGGGGATGTGCCAGAGAAAG+AGG + chr8_2:36224899-36224918 None:intergenic 60.0%
AGAGAAAGAGGGACCAGCCG+GGG + chr8_2:36224947-36224966 None:intergenic 60.0%
CAGAGAAAGAGGGACCAGCC+GGG + chr8_2:36224948-36224967 None:intergenic 60.0%
CCAGAGAAAGAGGGACCAGC+CGG + chr8_2:36224949-36224968 None:intergenic 60.0%
TCTGCCGGAGCCAATACGCG+AGG - chr8_2:36222684-36222703 Msa1245940:CDS 65.0%
GCAACAGGAGGCCCCCAGTA+AGG + chr8_2:36223120-36223139 None:intergenic 65.0%
GGGGCTGCGCCAGAGAAAGA+GGG + chr8_2:36224838-36224857 None:intergenic 65.0%
CTCTTTCTCTGGCGCAGCCC+CGG - chr8_2:36224837-36224856 Msa1245940:CDS 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:36224856-36224875 Msa1245940:CDS 65.0%
CGGGGCTGTGCCAGAGAAAG+AGG + chr8_2:36224869-36224888 None:intergenic 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:36224856-36224875 Msa1245940:CDS 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:36224856-36224875 Msa1245940:CDS 65.0%
TTCTCTGGCACATCCCCGGC+TGG - chr8_2:36224901-36224920 Msa1245940:CDS 65.0%
! CCGGCTGGTCCCTCTTTCTC+TGG - chr8_2:36224946-36224965 Msa1245940:CDS 65.0%
GGGGCTGCGCCAGAGAAAGA+GGG + chr8_2:36224838-36224857 None:intergenic 65.0%
TGGGGCTGCGCCAGAGAAAG+AGG + chr8_2:36224959-36224978 None:intergenic 65.0%
TGAGGCGGCAGGGCCGACAA+AGG + chr8_2:36224740-36224759 None:intergenic 70.0%
TTGCAGGGGCTGAGGCGGCA+GGG + chr8_2:36224750-36224769 None:intergenic 70.0%
ATTGCAGGGGCTGAGGCGGC+AGG + chr8_2:36224751-36224770 None:intergenic 70.0%
CGGGGCTGCGCCAGAGAAAG+AGG + chr8_2:36224839-36224858 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 36221334 36226140 36221334 ID=Msa1245940;Name=Msa1245940
chr8_2 mRNA 36221334 36226140 36221334 ID=Msa1245940-mRNA-1;Parent=Msa1245940;Name=Msa1245940-mRNA-1;_AED=0.18;_eAED=0.18;_QI=217|1|0.85|1|1|1|7|298|868
chr8_2 exon 36221334 36221724 36221334 ID=Msa1245940-mRNA-1:exon:11591;Parent=Msa1245940-mRNA-1
chr8_2 exon 36222271 36222975 36222271 ID=Msa1245940-mRNA-1:exon:11590;Parent=Msa1245940-mRNA-1
chr8_2 exon 36223094 36223243 36223094 ID=Msa1245940-mRNA-1:exon:11589;Parent=Msa1245940-mRNA-1
chr8_2 exon 36223362 36223607 36223362 ID=Msa1245940-mRNA-1:exon:11588;Parent=Msa1245940-mRNA-1
chr8_2 exon 36223693 36223819 36223693 ID=Msa1245940-mRNA-1:exon:11587;Parent=Msa1245940-mRNA-1
chr8_2 exon 36223900 36225161 36223900 ID=Msa1245940-mRNA-1:exon:11586;Parent=Msa1245940-mRNA-1
chr8_2 exon 36225900 36226140 36225900 ID=Msa1245940-mRNA-1:exon:11585;Parent=Msa1245940-mRNA-1
chr8_2 five_prime_UTR 36225924 36226140 36225924 ID=Msa1245940-mRNA-1:five_prime_utr;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36225900 36225923 36225900 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36223900 36225161 36223900 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36223693 36223819 36223693 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36223362 36223607 36223362 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36223094 36223243 36223094 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36222271 36222975 36222271 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 CDS 36221632 36221724 36221632 ID=Msa1245940-mRNA-1:cds;Parent=Msa1245940-mRNA-1
chr8_2 three_prime_UTR 36221334 36221631 36221334 ID=Msa1245940-mRNA-1:three_prime_utr;Parent=Msa1245940-mRNA-1
Gene Sequence

>Msa1245940

ATGGATTCTTCTCTCGTTATCAAGGCGAAATATGGAGATGCCCTCAGGCGCTTCAATGTTCGTGTGGATGAGAATAATCGATTGGATCTTAACATGGCTGGGTTGAGGGCTAAGATATGTTCTATTTACAATTTCCCTGCTGATGCGAATCTAACTTTGAGATATGTTGATGAGGATGGCGACTTGGTGAATCTTGTGGATGATGAAGATTTGCATGATGTGATGAGACAGCAATTAAAATTCTTGAAAATTGATGTCCAGATGATCAATCATTCTGGTGCTAAATCTGATGCTGGTGGCTCTAGTGGAGGTGCTAGTGGAAGTGCCACCCCTTTGACATATCCTCCTGTCTCAGACCCTTTCCTAAACTTTGTTAAAGCTGATGCTTTGCAAGCTCTGCCGGAGCCAATACGCGAGGCTCTTTATTCGTCATTTGCAAAGGCTGCATCTTCAAATCCAGTGCTAGCAAATATTGCTGATTCAATTTCCAAAATTGGACAGTCTATTCTAAACCCTCAAGGCCAATCTCACGTTGCTGGTGGTACAAGCTCAAAAAACGGCGTTCCCAGTGAATCTGTCACTCCTAAAGCAAAAGGTCCGCAGTCTCCATGTGTGGATTCTGCTCCCAATGCCAGTGACTATGCTAGATCTAGTGGAACTGCCATCCCCTTAAGATCTCCTGGGAATGTTGTTAAAACTAATGTTTCAAATTCTGTGCTACAGGAGGCTCTTTCTAATTTGTCACTTTCAAAACCTGCATCTTCGAGACAAGTTCCCTCTAATTCCACTGATTCAATTTCCCAAACTGGACAATCTACTGTGAAATCCCCTTACTGGGGGCCTCCTGTTGCAATTGGTACAAGCTCAAAAAACGATGCCAGTCGACAGGTTGAGTCTAAAATTGCGGGAGTTTCCCCGGTTGATCTCAATGTTCCTCCATGCAATCCCTACTCATCCACTAACGTAAATAGAGTACCACCTTCATCAGCAGTCCCTGTTAGTGATGACAAGGGTAAATCGTCTATTGATGACAAGGGTAATTTTGTCTTTCCTAATAACAATGCAACCAAGAACCCTACTTTAGGTTTCAGTGCTCCTATTGACTGTCCATTTTCTGGGACACATACTCTTCATTCAATGCCACCTCCTCTAGGAAACTTTCGCATTTCTCCATTTAAAAGGAGCCACGCTCACTCTGATGCATTGAATGGCATGTTTCACAAGGGGGTCCGTTGTGATGGTTGTGGAGTGTATCCAATAACCGGACCTCGTTTCAAATCCAAAGTAAAAGAAAACTATGATCTATGCATCATTTGCTTCAATGAAATGGGTAATCAGATTGATTATATCAGAATGGACCGTCCTGCATCTTTTCGTTCCCCAAGATGTTCATATCTGAATACCAAAGAATTTAGACATCCAAAGATACCACCACCTATTTTTAAAACAGGACCTCTTTCGAAGCATGCAAAGTCTAAGCTAGATAGTCGGTTCATTTTGGATGTTAATGTCATAGACGGAACAATGATGGCTCCATCTACTGCATTCACAAAGATCTGGCGGATGCGCAACAATGGCACTTCAGTGTGGCCCAAGGGAACTCAACTTGTTTGGATTGGAGGAGACAAACTAAGTGACTCCCTCTCTGTTGACTTAGAGGTTCCTGAGGACGGTGTACCTGTAGAGAAAGAGCTTGACGTTGCAGTTGATTTTAGAGCGCCCCAGTTACCTGGTAGATACATATCATACTGGAGGATGGCATCTCTCTCTGGACATAAATTTGGCCAACGTGTTTGGGTCCTTATACAGGTCGATGCATCTCTCAAGGACTCATTTTATGATAGCTCGCAAGGTCTGAACTTGAATATTCCCCTTGGTGTTGGTAGCTCTGAATGGCCTCGGATTATAGATATCAATGTTCAACCTATTGAGGATGATGTTTTTCATCAACCCCAAAATCCCAATGCTCCACCTGAACCTGTGAATCAAATGGTTGATAAGGAACAGAGGCAGGAATTGGGAAATGAATTTCCTACAAATGAAGCTACCTTTGTCGGCCCTGCCGCCTCAGCCCCTGCAATTTCAGTGTCACCTTCGTCTATTTCTTACCCCATTATTGATTTCTCTGGCACAGCCCCAGCTGCTCCCTCTTTCTCTGGCGCAGCCCCGGCTGCTCCCTCTTTCTCTGGCACAGCCCCGGCTGCTCCCTCTTTCTCTGGCACATCCCCGGCTGCTCCCTCTTTCTCTGGCACATCCCCGGCTGGTCCCTCTTTCTCTGGCGCAGCCCCAGCCATTCCGCAAACTTCAACTCTGGATGCACTTTCATCATCTCTAAGCACAGATAATGATCTTGTGGAAGAGGCTCTCCTTAAAGAGCTTGAGGCTATGGGTTTCAAGCAGGTTGATTTAAACAAAGAGGTTCTGAGAATGACAGATTACAATCTGGAGCAGTCAATTGATGAACTCTGCGGTGTTCTTGATTGGGATCCTCTCCTTGAAGAGCTACACGAGATGGGTTTCCGTGACACAGAAACAAACAGGAGGCTACTGATGAAAAACGATGGAAGCATCAAACGTGTTGTTATGGATTTACTCAATGGAGAGTAG
Protein sequence

>Msa1245940

MDSSLVIKAKYGDALRRFNVRVDENNRLDLNMAGLRAKICSIYNFPADANLTLRYVDEDGDLVNLVDDEDLHDVMRQQLKFLKIDVQMINHSGAKSDAGGSSGGASGSATPLTYPPVSDPFLNFVKADALQALPEPIREALYSSFAKAASSNPVLANIADSISKIGQSILNPQGQSHVAGGTSSKNGVPSESVTPKAKGPQSPCVDSAPNASDYARSSGTAIPLRSPGNVVKTNVSNSVLQEALSNLSLSKPASSRQVPSNSTDSISQTGQSTVKSPYWGPPVAIGTSSKNDASRQVESKIAGVSPVDLNVPPCNPYSSTNVNRVPPSSAVPVSDDKGKSSIDDKGNFVFPNNNATKNPTLGFSAPIDCPFSGTHTLHSMPPPLGNFRISPFKRSHAHSDALNGMFHKGVRCDGCGVYPITGPRFKSKVKENYDLCIICFNEMGNQIDYIRMDRPASFRSPRCSYLNTKEFRHPKIPPPIFKTGPLSKHAKSKLDSRFILDVNVIDGTMMAPSTAFTKIWRMRNNGTSVWPKGTQLVWIGGDKLSDSLSVDLEVPEDGVPVEKELDVAVDFRAPQLPGRYISYWRMASLSGHKFGQRVWVLIQVDASLKDSFYDSSQGLNLNIPLGVGSSEWPRIIDINVQPIEDDVFHQPQNPNAPPEPVNQMVDKEQRQELGNEFPTNEATFVGPAASAPAISVSPSSISYPIIDFSGTAPAAPSFSGAAPAAPSFSGTAPAAPSFSGTSPAAPSFSGTSPAGPSFSGAAPAIPQTSTLDALSSSLSTDNDLVEEALLKELEAMGFKQVDLNKEVLRMTDYNLEQSIDELCGVLDWDPLLEELHEMGFRDTETNRRLLMKNDGSIKRVVMDLLNGE*