Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749490 | XP_003626798.1 | 44.578 | 166 | 61 | 6 | 135 | 278 | 23 | 179 | 1.01e-25 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749490 | sp|Q9LY41|ATL4_ARATH | 42.017 | 119 | 56 | 4 | 170 | 281 | 88 | 200 | 1.53e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749490 | G7LDE0 | 44.578 | 166 | 61 | 6 | 135 | 278 | 23 | 179 | 4.81e-26 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa0749490 | 0.805138 | 1.542844e-49 | -8.615850e-47 |
| Msa0011850 | Msa0749490 | 0.804575 | 2.022875e-49 | -8.615850e-47 |
| Msa0050730 | Msa0749490 | 0.823669 | 1.223336e-53 | -8.615850e-47 |
| Msa0050760 | Msa0749490 | 0.824396 | 8.257490e-54 | -8.615850e-47 |
| Msa0096450 | Msa0749490 | 0.804876 | 1.749909e-49 | -8.615850e-47 |
| Msa0105340 | Msa0749490 | 0.811228 | 7.774392e-51 | -8.615850e-47 |
| Msa0105420 | Msa0749490 | 0.802432 | 5.626228e-49 | -8.615850e-47 |
| Msa0610590 | Msa0749490 | 0.828556 | 8.420600e-55 | -8.615850e-47 |
| Msa0651190 | Msa0749490 | 0.819296 | 1.251542e-52 | -8.615850e-47 |
| Msa0743260 | Msa0749490 | 0.811837 | 5.734546e-51 | -8.615850e-47 |
| Msa0749490 | Msa0749520 | 0.899200 | 2.508211e-77 | -8.615850e-47 |
| Msa0749490 | Msa0767080 | 0.817813 | 2.714760e-52 | -8.615850e-47 |
| Msa0749490 | Msa0775260 | 0.807869 | 4.093146e-50 | -8.615850e-47 |
| Msa0749490 | Msa0793920 | 0.961179 | 2.109693e-119 | -8.615850e-47 |
| Msa0749490 | Msa0831420 | 0.988605 | 1.118737e-174 | -8.615850e-47 |
| Msa0749490 | Msa0853170 | 0.811487 | 6.831384e-51 | -8.615850e-47 |
| Msa0749490 | Msa0882510 | 0.802519 | 5.399376e-49 | -8.615850e-47 |
| Msa0749490 | Msa0896210 | 0.827350 | 1.641894e-54 | -8.615850e-47 |
| Msa0749490 | Msa0896220 | 0.818129 | 2.303093e-52 | -8.615850e-47 |
| Msa0749490 | Msa0991670 | 0.802901 | 4.503254e-49 | -8.615850e-47 |
| Msa0749490 | Msa0996080 | 0.813660 | 2.287414e-51 | -8.615850e-47 |
| Msa0749490 | Msa1085300 | 0.803341 | 3.650386e-49 | -8.615850e-47 |
| Msa0749490 | Msa1097840 | 0.803177 | 3.948695e-49 | -8.615850e-47 |
| Msa0749490 | Msa1131940 | -0.802278 | 6.051465e-49 | -8.615850e-47 |
| Msa0749490 | Msa1217810 | 0.802058 | 6.716074e-49 | -8.615850e-47 |
| Msa0749490 | Msa1235630 | 0.803997 | 2.668832e-49 | -8.615850e-47 |
| Msa0749490 | Msa1237030 | 0.800121 | 1.672158e-48 | -8.615850e-47 |
| Msa0749490 | Msa1252070 | 0.802683 | 4.993796e-49 | -8.615850e-47 |
| Msa0749490 | Msa1300350 | -0.805176 | 1.514862e-49 | -8.615850e-47 |
| Msa0749490 | Msa1340650 | 0.805573 | 1.250832e-49 | -8.615850e-47 |
| Msa0749490 | Msa1408790 | 0.802891 | 4.523675e-49 | -8.615850e-47 |
| Msa0749490 | Msa1440600 | 0.825720 | 4.017838e-54 | -8.615850e-47 |
| Msa0208630 | Msa0749490 | 0.801431 | 9.031634e-49 | -8.615850e-47 |
| Msa0449760 | Msa0749490 | 0.823976 | 1.036254e-53 | -8.615850e-47 |
| Msa0449830 | Msa0749490 | 0.802096 | 6.597382e-49 | -8.615850e-47 |
| Msa0480320 | Msa0749490 | 0.813368 | 2.651980e-51 | -8.615850e-47 |
| Msa0282250 | Msa0749490 | 0.805780 | 1.131721e-49 | -8.615850e-47 |
| Msa0296760 | Msa0749490 | 0.840781 | 7.069072e-58 | -8.615850e-47 |
| Msa0315290 | Msa0749490 | 0.809365 | 1.961798e-50 | -8.615850e-47 |
| Msa0328210 | Msa0749490 | 0.800615 | 1.326213e-48 | -8.615850e-47 |
| Msa0578970 | Msa0749490 | 0.824190 | 9.230674e-54 | -8.615850e-47 |
| Msa0587690 | Msa0749490 | 0.812746 | 3.630052e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749490 | MtrunA17_Chr8g0336881 | 44.578 | 166 | 61 | 6 | 135 | 278 | 23 | 179 | 9.26e-30 | 114 |
| Msa0749490 | MtrunA17_Chr8g0347461 | 50.000 | 112 | 44 | 5 | 176 | 284 | 117 | 219 | 6.46e-21 | 90.1 |
| Msa0749490 | MtrunA17_Chr2g0301871 | 47.321 | 112 | 47 | 5 | 179 | 284 | 63 | 168 | 7.34e-21 | 90.1 |
| Msa0749490 | MtrunA17_Chr5g0409211 | 32.031 | 128 | 71 | 7 | 131 | 246 | 13 | 136 | 4.37e-14 | 68.9 |
| Msa0749490 | MtrunA17_Chr3g0133001 | 40.541 | 74 | 32 | 3 | 175 | 246 | 135 | 198 | 1.71e-12 | 67.0 |
| Msa0749490 | MtrunA17_Chr5g0409201 | 30.303 | 132 | 77 | 5 | 126 | 246 | 8 | 135 | 3.05e-12 | 63.5 |
| Msa0749490 | MtrunA17_Chr5g0427431 | 35.789 | 95 | 45 | 4 | 159 | 246 | 117 | 202 | 6.43e-12 | 65.5 |
| Msa0749490 | MtrunA17_Chr6g0486651 | 31.902 | 163 | 82 | 7 | 100 | 246 | 12 | 161 | 1.29e-11 | 64.3 |
| Msa0749490 | MtrunA17_Chr3g0123641 | 28.276 | 145 | 86 | 5 | 132 | 269 | 2 | 135 | 2.01e-11 | 62.8 |
| Msa0749490 | MtrunA17_Chr1g0148631 | 45.455 | 55 | 30 | 0 | 202 | 256 | 338 | 392 | 2.22e-11 | 63.9 |
| Msa0749490 | MtrunA17_Chr8g0388231 | 30.534 | 131 | 74 | 6 | 127 | 247 | 257 | 380 | 2.35e-11 | 63.9 |
| Msa0749490 | MtrunA17_Chr3g0123631 | 29.008 | 131 | 80 | 5 | 132 | 255 | 2 | 126 | 2.70e-11 | 61.6 |
| Msa0749490 | MtrunA17_Chr7g0275601 | 27.200 | 125 | 78 | 4 | 136 | 247 | 27 | 151 | 2.85e-11 | 60.8 |
| Msa0749490 | MtrunA17_Chr6g0451051 | 30.400 | 125 | 74 | 3 | 136 | 259 | 9 | 121 | 4.23e-11 | 60.1 |
| Msa0749490 | MtrunA17_Chr8g0364881 | 46.753 | 77 | 31 | 3 | 176 | 251 | 74 | 141 | 4.93e-11 | 62.4 |
| Msa0749490 | MtrunA17_Chr2g0305161 | 40.678 | 59 | 35 | 0 | 191 | 249 | 128 | 186 | 5.24e-11 | 60.8 |
| Msa0749490 | MtrunA17_Chr3g0112041 | 42.105 | 57 | 31 | 1 | 192 | 246 | 198 | 254 | 6.10e-11 | 61.6 |
| Msa0749490 | MtrunA17_Chr6g0451161 | 44.156 | 77 | 33 | 3 | 174 | 249 | 137 | 204 | 6.34e-11 | 62.4 |
| Msa0749490 | MtrunA17_Chr4g0031911 | 43.396 | 53 | 28 | 1 | 196 | 246 | 198 | 250 | 7.32e-11 | 61.6 |
| Msa0749490 | MtrunA17_Chr7g0274741 | 47.059 | 51 | 26 | 1 | 204 | 253 | 98 | 148 | 7.53e-11 | 60.1 |
| Msa0749490 | MtrunA17_Chr3g0138451 | 35.000 | 80 | 50 | 2 | 177 | 255 | 289 | 367 | 8.68e-11 | 62.0 |
| Msa0749490 | MtrunA17_Chr4g0059161 | 38.824 | 85 | 38 | 3 | 162 | 246 | 206 | 276 | 8.98e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749490 | AT3G60220.1 | 42.017 | 119 | 56 | 4 | 170 | 281 | 88 | 200 | 1.56e-18 | 84.7 |
| Msa0749490 | AT4G32600.1 | 34.545 | 110 | 51 | 3 | 165 | 256 | 308 | 414 | 2.41e-13 | 70.1 |
| Msa0749490 | AT4G32600.2 | 34.545 | 110 | 51 | 3 | 165 | 256 | 308 | 414 | 2.41e-13 | 70.1 |
| Msa0749490 | AT1G35330.1 | 31.395 | 172 | 86 | 8 | 131 | 279 | 44 | 206 | 5.07e-13 | 68.6 |
| Msa0749490 | AT3G48030.1 | 46.250 | 80 | 34 | 3 | 176 | 254 | 186 | 257 | 6.82e-13 | 68.6 |
| Msa0749490 | AT1G80400.1 | 33.333 | 102 | 53 | 2 | 168 | 254 | 303 | 404 | 6.88e-13 | 68.9 |
| Msa0749490 | AT3G18930.2 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 7.21e-13 | 68.6 |
| Msa0749490 | AT3G18930.3 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 7.21e-13 | 68.6 |
| Msa0749490 | AT3G18930.1 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 7.21e-13 | 68.6 |
| Msa0749490 | AT3G48030.2 | 46.250 | 80 | 34 | 3 | 176 | 254 | 108 | 179 | 9.65e-13 | 67.4 |
| Msa0749490 | AT4G28890.1 | 43.421 | 76 | 33 | 3 | 176 | 250 | 103 | 169 | 1.02e-12 | 68.2 |
| Msa0749490 | AT5G57750.1 | 47.945 | 73 | 29 | 3 | 176 | 247 | 101 | 165 | 1.70e-12 | 65.9 |
| Msa0749490 | AT4G11680.1 | 33.673 | 98 | 48 | 3 | 176 | 256 | 293 | 390 | 1.87e-11 | 64.3 |
| Msa0749490 | AT1G20823.1 | 43.284 | 67 | 37 | 1 | 184 | 249 | 90 | 156 | 2.04e-11 | 62.4 |
| Msa0749490 | AT1G76410.1 | 33.333 | 120 | 72 | 4 | 132 | 249 | 36 | 149 | 2.57e-11 | 62.0 |
| Msa0749490 | AT1G23980.1 | 44.156 | 77 | 33 | 3 | 174 | 249 | 122 | 189 | 3.23e-11 | 63.5 |
| Msa0749490 | AT2G20030.1 | 35.714 | 112 | 57 | 5 | 176 | 286 | 104 | 201 | 3.37e-11 | 63.5 |
| Msa0749490 | AT2G15580.1 | 53.488 | 43 | 20 | 0 | 204 | 246 | 149 | 191 | 4.58e-11 | 61.2 |
| Msa0749490 | AT4G35480.1 | 43.750 | 64 | 34 | 2 | 193 | 255 | 102 | 164 | 7.04e-11 | 60.8 |
| Msa0749490 | AT3G47990.3 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 7.12e-11 | 62.0 |
| Msa0749490 | AT3G47990.5 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 7.12e-11 | 62.0 |
| Msa0749490 | AT3G47990.4 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 7.12e-11 | 62.0 |
| Msa0749490 | AT4G40070.1 | 26.471 | 204 | 116 | 10 | 101 | 288 | 14 | 199 | 7.13e-11 | 62.4 |
| Msa0749490 | AT5G05810.1 | 40.541 | 74 | 32 | 3 | 175 | 246 | 125 | 188 | 7.97e-11 | 62.4 |
| Msa0749490 | AT3G47990.2 | 36.000 | 100 | 50 | 3 | 164 | 262 | 191 | 277 | 9.98e-11 | 62.0 |
Find 72 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGCTCACGTTTCCTATT+TGG | 0.229228 | 5_2:+3022282 | None:intergenic |
| GTCGTCCGTGGTGGTGGCGT+TGG | 0.373084 | 5_2:+3022611 | None:intergenic |
| GCCAACGAGGTTTGCATCCA+TGG | 0.419497 | 5_2:+3022712 | None:intergenic |
| GACAGTATCACCGTCCAAAT+AGG | 0.426859 | 5_2:-3022296 | Msa0749490:CDS |
| TTTAACAGCTTGAGTATTGT+TGG | 0.429356 | 5_2:+3023468 | None:intergenic |
| CCGTGGTGGTGGCGTTGGGT+TGG | 0.435131 | 5_2:+3022616 | None:intergenic |
| TTGAGGAGAAACGGAAGAGA+GGG | 0.448642 | 5_2:+3022555 | None:intergenic |
| CGATTCCAACACCGACCTCT+TGG | 0.451236 | 5_2:-3022342 | Msa0749490:CDS |
| TCGTCCGTGGTGGTGGCGTT+GGG | 0.454118 | 5_2:+3022612 | None:intergenic |
| CAACCATTGTTGAGACATGA+TGG | 0.466296 | 5_2:+3023444 | None:intergenic |
| CAAGAGGTCGGTGTTGGAAT+CGG | 0.472953 | 5_2:+3022343 | None:intergenic |
| CTTCCGACGGCTCCGTCAAA+CGG | 0.483665 | 5_2:+3022232 | None:intergenic |
| ATTGTTGGCCACGGATGGAT+TGG | 0.484950 | 5_2:+3023483 | None:intergenic |
| GTAACAGTCGTCCGTGGTGG+TGG | 0.486562 | 5_2:+3022605 | None:intergenic |
| GGTGGGTCCGATGGTGGAAA+AGG | 0.488594 | 5_2:+3022520 | None:intergenic |
| GAGTGAAAAGCGTGGAAACA+TGG | 0.489948 | 5_2:+3022428 | None:intergenic |
| ATTGAGGAGAAACGGAAGAG+AGG | 0.499378 | 5_2:+3022554 | None:intergenic |
| AAATAGGAAACGTGAGCCTC+CGG | 0.500001 | 5_2:-3022280 | Msa0749490:CDS |
| GGTTGGAACGGCGGTGATGA+AGG | 0.500084 | 5_2:+3022633 | None:intergenic |
| TGAGTATTGTTGGCCACGGA+TGG | 0.500791 | 5_2:+3023478 | None:intergenic |
| CCGATCTCGAATCCGTTTGA+CGG | 0.501263 | 5_2:-3022244 | None:intergenic |
| CGCGAGAAATTGAGGAGAAA+CGG | 0.509382 | 5_2:+3022546 | None:intergenic |
| GACATCGCCGGTGGGTCCGA+TGG | 0.510113 | 5_2:+3022511 | None:intergenic |
| AAAGGTGCCGCGAGAAATTG+AGG | 0.516065 | 5_2:+3022538 | None:intergenic |
| AAACGGAGGTGAGCGGAGAA+TGG | 0.521841 | 5_2:+3022319 | None:intergenic |
| ACCACCACGGACGACTGTTA+CGG | 0.525467 | 5_2:-3022603 | Msa0749490:CDS |
| AACGGATTCGAGATCGGTGG+CGG | 0.526950 | 5_2:+3022250 | None:intergenic |
| TTGTATGCTAGAATAATCAT+TGG | 0.536757 | 5_2:+3023523 | None:intergenic |
| ATCGCCGGTGGGTCCGATGG+TGG | 0.537352 | 5_2:+3022514 | None:intergenic |
| AATGCTACAAACATATAAGA+AGG | 0.541568 | 5_2:-3022847 | Msa0749490:CDS |
| GTGGTGGCGTTGGGTTGGAA+CGG | 0.541959 | 5_2:+3022621 | None:intergenic |
| AGCTTGAGTATTGTTGGCCA+CGG | 0.547462 | 5_2:+3023474 | None:intergenic |
| GTGGCGTTGGGTTGGAACGG+CGG | 0.551299 | 5_2:+3022624 | None:intergenic |
| AATGGCCAAGAGGTCGGTGT+TGG | 0.552990 | 5_2:+3022337 | None:intergenic |
| GATCGGTGGCGGTTTCGCGC+CGG | 0.557217 | 5_2:+3022261 | None:intergenic |
| CGGTGGCGGTTTCGCGCCGG+AGG | 0.559519 | 5_2:+3022264 | None:intergenic |
| TCCATGGATGCAAACCTCGT+TGG | 0.561231 | 5_2:-3022713 | Msa0749490:CDS |
| ACTCTTACTGCATAAGCAGA+TGG | 0.563965 | 5_2:-3022409 | Msa0749490:CDS |
| GCAATTGTGAAACGAGTGAA+AGG | 0.566267 | 5_2:+3022663 | None:intergenic |
| CAATGAGTCCCTCGTGCGTG+TGG | 0.572775 | 5_2:+3022810 | None:intergenic |
| AAAGCAAAACCACACGCACG+AGG | 0.576130 | 5_2:-3022819 | Msa0749490:CDS |
| AACGAAGCATGTCGTTGTTG+CGG | 0.577997 | 5_2:+3022456 | None:intergenic |
| GTCATCGTCGACATCGCCGG+TGG | 0.578999 | 5_2:+3022502 | None:intergenic |
| CCGTCAAACGGATTCGAGAT+CGG | 0.580404 | 5_2:+3022244 | None:intergenic |
| ACAGTCATCGTCGACATCGC+CGG | 0.580449 | 5_2:+3022499 | None:intergenic |
| GACGACTGTTACGGAAACAT+TGG | 0.585613 | 5_2:-3022594 | Msa0749490:CDS |
| CTAGCATACAAGTTTGCTCG+TGG | 0.587303 | 5_2:-3023511 | Msa0749490:CDS |
| AGTGAAAAGCGTGGAAACAT+GGG | 0.589501 | 5_2:+3022429 | None:intergenic |
| CCATGGAGTGAAACGAAAAG+AGG | 0.589662 | 5_2:+3022729 | None:intergenic |
| TGGACGGTGATACTGTCAAA+CGG | 0.597045 | 5_2:+3022302 | None:intergenic |
| GCTCACGTTTCCTATTTGGA+CGG | 0.601842 | 5_2:+3022286 | None:intergenic |
| CGTTTCTCCTCAATTTCTCG+CGG | 0.602815 | 5_2:-3022545 | Msa0749490:CDS |
| AGAGAGAAAGAAATGCGTTG+TGG | 0.618174 | 5_2:+3022758 | None:intergenic |
| GCGGAGAATGGCCAAGAGGT+CGG | 0.629982 | 5_2:+3022331 | None:intergenic |
| AGAAACGGAAGAGAGGGAGT+CGG | 0.630762 | 5_2:+3022561 | None:intergenic |
| TCCGTAACAGTCGTCCGTGG+TGG | 0.641987 | 5_2:+3022602 | None:intergenic |
| GTGAAAGGAAGAGAAGCGCG+AGG | 0.644848 | 5_2:+3022678 | None:intergenic |
| TGCAGTAAGAGTGAAAAGCG+TGG | 0.645395 | 5_2:+3022420 | None:intergenic |
| GTTTCCGTAACAGTCGTCCG+TGG | 0.645896 | 5_2:+3022599 | None:intergenic |
| AAACCATCATGTCTCAACAA+TGG | 0.647470 | 5_2:-3023447 | Msa0749490:CDS |
| TACTGTCAAACGGAGGTGAG+CGG | 0.656369 | 5_2:+3022312 | None:intergenic |
| GAGAGGACATCGCGGCAGAG+AGG | 0.671800 | 5_2:+3022365 | None:intergenic |
| TCATCGTCGACATCGCCGGT+GGG | 0.672625 | 5_2:+3022503 | None:intergenic |
| TGGAGAAACCAATCCATCCG+TGG | 0.675735 | 5_2:-3023491 | Msa0749490:CDS |
| AAGCAAAACCACACGCACGA+GGG | 0.682505 | 5_2:-3022818 | Msa0749490:CDS |
| TCAAACGGATTCGAGATCGG+TGG | 0.696292 | 5_2:+3022247 | None:intergenic |
| CCAACCCAACGCCACCACCA+CGG | 0.700116 | 5_2:-3022616 | Msa0749490:CDS |
| GTGAGCGGAGAATGGCCAAG+AGG | 0.707678 | 5_2:+3022327 | None:intergenic |
| GGTCGGTGTTGGAATCGGAG+AGG | 0.717591 | 5_2:+3022348 | None:intergenic |
| GGAAAATGAGAAAGCCAACG+AGG | 0.717650 | 5_2:+3022699 | None:intergenic |
| TGGAATCGGAGAGGACATCG+CGG | 0.769053 | 5_2:+3022357 | None:intergenic |
| ACGGTGATACTGTCAAACGG+AGG | 0.799114 | 5_2:+3022305 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAACCATGTAATTTT+TGG | + | chr5_2:3022375-3022394 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+GGG | + | chr5_2:3022553-3022572 | None:intergenic | 15.0% |
| !!! | TTATTAAACCATGTAATTTT+TGG | + | chr5_2:3022375-3022394 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+GGG | + | chr5_2:3022553-3022572 | None:intergenic | 15.0% |
| !!! | GTCATTTTCTCAAATTATTA+TGG | + | chr5_2:3022554-3022573 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTAATTGTTTT+TGG | + | chr5_2:3022678-3022697 | None:intergenic | 20.0% |
| !!! | CTATTTTTTCATGAAATTTC+AGG | + | chr5_2:3022781-3022800 | None:intergenic | 20.0% |
| !!! | GTCATTTTCTCAAATTATTA+TGG | + | chr5_2:3022554-3022573 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTAATTGTTTT+TGG | + | chr5_2:3022678-3022697 | None:intergenic | 20.0% |
| !!! | CTATTTTTTCATGAAATTTC+AGG | + | chr5_2:3022781-3022800 | None:intergenic | 20.0% |
| !!! | ACCATGTAATTTTTGGTTTA+GGG | + | chr5_2:3022368-3022387 | None:intergenic | 25.0% |
| !!! | AACCATGTAATTTTTGGTTT+AGG | + | chr5_2:3022369-3022388 | None:intergenic | 25.0% |
| ! | ATGAAATTTCAGATGTATAG+TGG | + | chr5_2:3022424-3022443 | None:intergenic | 25.0% |
| ! | ATGAAACACCAATATAGATA+CGG | - | chr5_2:3022491-3022510 | Msa0749490:CDS | 25.0% |
| ! | GCATGTTTGTTTAGAAATTT+CGG | - | chr5_2:3022637-3022656 | Msa0749490:CDS | 25.0% |
| ! | TGGAAATTTATTCCATTGTA+AGG | + | chr5_2:3022747-3022766 | None:intergenic | 25.0% |
| ! | AATGCTACAAACATATAAGA+AGG | - | chr5_2:3022920-3022939 | Msa0749490:CDS | 25.0% |
| !!! | ACCATGTAATTTTTGGTTTA+GGG | + | chr5_2:3022368-3022387 | None:intergenic | 25.0% |
| !!! | AACCATGTAATTTTTGGTTT+AGG | + | chr5_2:3022369-3022388 | None:intergenic | 25.0% |
| ! | ATGAAATTTCAGATGTATAG+TGG | + | chr5_2:3022424-3022443 | None:intergenic | 25.0% |
| ! | ATGAAACACCAATATAGATA+CGG | - | chr5_2:3022491-3022510 | Msa0749490:CDS | 25.0% |
| ! | GCATGTTTGTTTAGAAATTT+CGG | - | chr5_2:3022637-3022656 | Msa0749490:CDS | 25.0% |
| ! | TGGAAATTTATTCCATTGTA+AGG | + | chr5_2:3022747-3022766 | None:intergenic | 25.0% |
| ! | AATGCTACAAACATATAAGA+AGG | - | chr5_2:3022920-3022939 | Msa0749490:CDS | 25.0% |
| ! | TTTAACAGCTTGAGTATTGT+TGG | + | chr5_2:3022302-3022321 | None:intergenic | 30.0% |
| !!! | CCATGTAATTTTTGGTTTAG+GGG | + | chr5_2:3022367-3022386 | None:intergenic | 30.0% |
| GGTTTAATAAAGAACTCGTA+TGG | - | chr5_2:3022385-3022404 | Msa0749490:CDS | 30.0% | |
| AATTTCAGATGTATAGTGGT+TGG | + | chr5_2:3022420-3022439 | None:intergenic | 30.0% | |
| CATGAAAAATAACCAGACAA+TGG | - | chr5_2:3022441-3022460 | Msa0749490:CDS | 30.0% | |
| TGATATGTCCGTATCTATAT+TGG | + | chr5_2:3022502-3022521 | None:intergenic | 30.0% | |
| !!! | CATTGTAAGGTTTGTTTTGA+GGG | + | chr5_2:3022734-3022753 | None:intergenic | 30.0% |
| ! | TCGTATTTGTTCGTGTTTTA+TGG | + | chr5_2:3022834-3022853 | None:intergenic | 30.0% |
| ! | TTTAACAGCTTGAGTATTGT+TGG | + | chr5_2:3022302-3022321 | None:intergenic | 30.0% |
| !!! | CCATGTAATTTTTGGTTTAG+GGG | + | chr5_2:3022367-3022386 | None:intergenic | 30.0% |
| GGTTTAATAAAGAACTCGTA+TGG | - | chr5_2:3022385-3022404 | Msa0749490:CDS | 30.0% | |
| AATTTCAGATGTATAGTGGT+TGG | + | chr5_2:3022420-3022439 | None:intergenic | 30.0% | |
| CATGAAAAATAACCAGACAA+TGG | - | chr5_2:3022441-3022460 | Msa0749490:CDS | 30.0% | |
| TGATATGTCCGTATCTATAT+TGG | + | chr5_2:3022502-3022521 | None:intergenic | 30.0% | |
| !!! | CATTGTAAGGTTTGTTTTGA+GGG | + | chr5_2:3022734-3022753 | None:intergenic | 30.0% |
| ! | TCGTATTTGTTCGTGTTTTA+TGG | + | chr5_2:3022834-3022853 | None:intergenic | 30.0% |
| AAACCATCATGTCTCAACAA+TGG | - | chr5_2:3022320-3022339 | Msa0749490:CDS | 35.0% | |
| CCCCTAAACCAAAAATTACA+TGG | - | chr5_2:3022364-3022383 | Msa0749490:CDS | 35.0% | |
| ! | TTTTGTTACTGTCCATTGTC+TGG | + | chr5_2:3022456-3022475 | None:intergenic | 35.0% |
| !!! | CCATTGTAAGGTTTGTTTTG+AGG | + | chr5_2:3022735-3022754 | None:intergenic | 35.0% |
| CCTCAAAACAAACCTTACAA+TGG | - | chr5_2:3022732-3022751 | Msa0749490:CDS | 35.0% | |
| ! | AATTTCAGGTGTATAGTGAC+TGG | + | chr5_2:3022767-3022786 | None:intergenic | 35.0% |
| ! | TGTTTTATGGTGTGATTGGT+TGG | + | chr5_2:3022821-3022840 | None:intergenic | 35.0% |
| ! | TTCGTGTTTTATGGTGTGAT+TGG | + | chr5_2:3022825-3022844 | None:intergenic | 35.0% |
| ! | GACACAACACTAACTTTTTG+CGG | - | chr5_2:3022860-3022879 | Msa0749490:CDS | 35.0% |
| ! | ACACAACACTAACTTTTTGC+GGG | - | chr5_2:3022861-3022880 | Msa0749490:CDS | 35.0% |
| AAACCATCATGTCTCAACAA+TGG | - | chr5_2:3022320-3022339 | Msa0749490:CDS | 35.0% | |
| CCCCTAAACCAAAAATTACA+TGG | - | chr5_2:3022364-3022383 | Msa0749490:CDS | 35.0% | |
| ! | TTTTGTTACTGTCCATTGTC+TGG | + | chr5_2:3022456-3022475 | None:intergenic | 35.0% |
| !!! | CCATTGTAAGGTTTGTTTTG+AGG | + | chr5_2:3022735-3022754 | None:intergenic | 35.0% |
| CCTCAAAACAAACCTTACAA+TGG | - | chr5_2:3022732-3022751 | Msa0749490:CDS | 35.0% | |
| ! | AATTTCAGGTGTATAGTGAC+TGG | + | chr5_2:3022767-3022786 | None:intergenic | 35.0% |
| ! | TGTTTTATGGTGTGATTGGT+TGG | + | chr5_2:3022821-3022840 | None:intergenic | 35.0% |
| ! | TTCGTGTTTTATGGTGTGAT+TGG | + | chr5_2:3022825-3022844 | None:intergenic | 35.0% |
| ! | GACACAACACTAACTTTTTG+CGG | - | chr5_2:3022860-3022879 | Msa0749490:CDS | 35.0% |
| ! | ACACAACACTAACTTTTTGC+GGG | - | chr5_2:3022861-3022880 | Msa0749490:CDS | 35.0% |
| CAACCATTGTTGAGACATGA+TGG | + | chr5_2:3022326-3022345 | None:intergenic | 40.0% | |
| TGAATGTGACTTCATGTGTC+AGG | - | chr5_2:3022579-3022598 | Msa0749490:CDS | 40.0% | |
| GAATGTGACTTCATGTGTCA+GGG | - | chr5_2:3022580-3022599 | Msa0749490:CDS | 40.0% | |
| AGAGAGAAAGAAATGCGTTG+TGG | + | chr5_2:3023012-3023031 | None:intergenic | 40.0% | |
| GCAATTGTGAAACGAGTGAA+AGG | + | chr5_2:3023107-3023126 | None:intergenic | 40.0% | |
| ! | AGTGAAAAGCGTGGAAACAT+GGG | + | chr5_2:3023341-3023360 | None:intergenic | 40.0% |
| ACTCTTACTGCATAAGCAGA+TGG | - | chr5_2:3023358-3023377 | Msa0749490:intron | 40.0% | |
| CAACCATTGTTGAGACATGA+TGG | + | chr5_2:3022326-3022345 | None:intergenic | 40.0% | |
| TGAATGTGACTTCATGTGTC+AGG | - | chr5_2:3022579-3022598 | Msa0749490:CDS | 40.0% | |
| GAATGTGACTTCATGTGTCA+GGG | - | chr5_2:3022580-3022599 | Msa0749490:CDS | 40.0% | |
| AGAGAGAAAGAAATGCGTTG+TGG | + | chr5_2:3023012-3023031 | None:intergenic | 40.0% | |
| GCAATTGTGAAACGAGTGAA+AGG | + | chr5_2:3023107-3023126 | None:intergenic | 40.0% | |
| ! | AGTGAAAAGCGTGGAAACAT+GGG | + | chr5_2:3023341-3023360 | None:intergenic | 40.0% |
| ACTCTTACTGCATAAGCAGA+TGG | - | chr5_2:3023358-3023377 | Msa0749490:intron | 40.0% | |
| ! | CTAGCATACAAGTTTGCTCG+TGG | - | chr5_2:3022256-3022275 | Msa0749490:CDS | 45.0% |
| ! | AGCTTGAGTATTGTTGGCCA+CGG | + | chr5_2:3022296-3022315 | None:intergenic | 45.0% |
| GATAGCAGCAGCTATTGTTG+AGG | + | chr5_2:3022701-3022720 | None:intergenic | 45.0% | |
| CCATGGAGTGAAACGAAAAG+AGG | + | chr5_2:3023041-3023060 | None:intergenic | 45.0% | |
| ! | CCTCTTTTCGTTTCACTCCA+TGG | - | chr5_2:3023038-3023057 | Msa0749490:intron | 45.0% |
| GGAAAATGAGAAAGCCAACG+AGG | + | chr5_2:3023071-3023090 | None:intergenic | 45.0% | |
| GACGACTGTTACGGAAACAT+TGG | - | chr5_2:3023173-3023192 | Msa0749490:intron | 45.0% | |
| TTGAGGAGAAACGGAAGAGA+GGG | + | chr5_2:3023215-3023234 | None:intergenic | 45.0% | |
| ATTGAGGAGAAACGGAAGAG+AGG | + | chr5_2:3023216-3023235 | None:intergenic | 45.0% | |
| CGCGAGAAATTGAGGAGAAA+CGG | + | chr5_2:3023224-3023243 | None:intergenic | 45.0% | |
| CGTTTCTCCTCAATTTCTCG+CGG | - | chr5_2:3023222-3023241 | Msa0749490:intron | 45.0% | |
| AACGAAGCATGTCGTTGTTG+CGG | + | chr5_2:3023314-3023333 | None:intergenic | 45.0% | |
| ! | GAGTGAAAAGCGTGGAAACA+TGG | + | chr5_2:3023342-3023361 | None:intergenic | 45.0% |
| TGCAGTAAGAGTGAAAAGCG+TGG | + | chr5_2:3023350-3023369 | None:intergenic | 45.0% | |
| TGGACGGTGATACTGTCAAA+CGG | + | chr5_2:3023468-3023487 | None:intergenic | 45.0% | |
| GACAGTATCACCGTCCAAAT+AGG | - | chr5_2:3023471-3023490 | Msa0749490:CDS | 45.0% | |
| GCTCACGTTTCCTATTTGGA+CGG | + | chr5_2:3023484-3023503 | None:intergenic | 45.0% | |
| AAATAGGAAACGTGAGCCTC+CGG | - | chr5_2:3023487-3023506 | Msa0749490:CDS | 45.0% | |
| ! | CTAGCATACAAGTTTGCTCG+TGG | - | chr5_2:3022256-3022275 | Msa0749490:CDS | 45.0% |
| ! | AGCTTGAGTATTGTTGGCCA+CGG | + | chr5_2:3022296-3022315 | None:intergenic | 45.0% |
| GATAGCAGCAGCTATTGTTG+AGG | + | chr5_2:3022701-3022720 | None:intergenic | 45.0% | |
| CCATGGAGTGAAACGAAAAG+AGG | + | chr5_2:3023041-3023060 | None:intergenic | 45.0% | |
| ! | CCTCTTTTCGTTTCACTCCA+TGG | - | chr5_2:3023038-3023057 | Msa0749490:intron | 45.0% |
| GGAAAATGAGAAAGCCAACG+AGG | + | chr5_2:3023071-3023090 | None:intergenic | 45.0% | |
| GACGACTGTTACGGAAACAT+TGG | - | chr5_2:3023173-3023192 | Msa0749490:intron | 45.0% | |
| TTGAGGAGAAACGGAAGAGA+GGG | + | chr5_2:3023215-3023234 | None:intergenic | 45.0% | |
| ATTGAGGAGAAACGGAAGAG+AGG | + | chr5_2:3023216-3023235 | None:intergenic | 45.0% | |
| CGCGAGAAATTGAGGAGAAA+CGG | + | chr5_2:3023224-3023243 | None:intergenic | 45.0% | |
| CGTTTCTCCTCAATTTCTCG+CGG | - | chr5_2:3023222-3023241 | Msa0749490:intron | 45.0% | |
| AACGAAGCATGTCGTTGTTG+CGG | + | chr5_2:3023314-3023333 | None:intergenic | 45.0% | |
| ! | GAGTGAAAAGCGTGGAAACA+TGG | + | chr5_2:3023342-3023361 | None:intergenic | 45.0% |
| TGCAGTAAGAGTGAAAAGCG+TGG | + | chr5_2:3023350-3023369 | None:intergenic | 45.0% | |
| TGGACGGTGATACTGTCAAA+CGG | + | chr5_2:3023468-3023487 | None:intergenic | 45.0% | |
| GACAGTATCACCGTCCAAAT+AGG | - | chr5_2:3023471-3023490 | Msa0749490:CDS | 45.0% | |
| GCTCACGTTTCCTATTTGGA+CGG | + | chr5_2:3023484-3023503 | None:intergenic | 45.0% | |
| AAATAGGAAACGTGAGCCTC+CGG | - | chr5_2:3023487-3023506 | Msa0749490:CDS | 45.0% | |
| TGGAGAAACCAATCCATCCG+TGG | - | chr5_2:3022276-3022295 | Msa0749490:CDS | 50.0% | |
| ATTGTTGGCCACGGATGGAT+TGG | + | chr5_2:3022287-3022306 | None:intergenic | 50.0% | |
| ! | TGAGTATTGTTGGCCACGGA+TGG | + | chr5_2:3022292-3022311 | None:intergenic | 50.0% |
| AAAGCAAAACCACACGCACG+AGG | - | chr5_2:3022948-3022967 | Msa0749490:CDS | 50.0% | |
| AAGCAAAACCACACGCACGA+GGG | - | chr5_2:3022949-3022968 | Msa0749490:CDS | 50.0% | |
| TCCATGGATGCAAACCTCGT+TGG | - | chr5_2:3023054-3023073 | Msa0749490:intron | 50.0% | |
| AGAAACGGAAGAGAGGGAGT+CGG | + | chr5_2:3023209-3023228 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCGCGAGAAATTG+AGG | + | chr5_2:3023232-3023251 | None:intergenic | 50.0% |
| !! | CAAGAGGTCGGTGTTGGAAT+CGG | + | chr5_2:3023427-3023446 | None:intergenic | 50.0% |
| TACTGTCAAACGGAGGTGAG+CGG | + | chr5_2:3023458-3023477 | None:intergenic | 50.0% | |
| ACGGTGATACTGTCAAACGG+AGG | + | chr5_2:3023465-3023484 | None:intergenic | 50.0% | |
| GGAGGCTCACGTTTCCTATT+TGG | + | chr5_2:3023488-3023507 | None:intergenic | 50.0% | |
| ! | TCAAACGGATTCGAGATCGG+TGG | + | chr5_2:3023523-3023542 | None:intergenic | 50.0% |
| TGGAGAAACCAATCCATCCG+TGG | - | chr5_2:3022276-3022295 | Msa0749490:CDS | 50.0% | |
| ATTGTTGGCCACGGATGGAT+TGG | + | chr5_2:3022287-3022306 | None:intergenic | 50.0% | |
| ! | TGAGTATTGTTGGCCACGGA+TGG | + | chr5_2:3022292-3022311 | None:intergenic | 50.0% |
| AAAGCAAAACCACACGCACG+AGG | - | chr5_2:3022948-3022967 | Msa0749490:CDS | 50.0% | |
| AAGCAAAACCACACGCACGA+GGG | - | chr5_2:3022949-3022968 | Msa0749490:CDS | 50.0% | |
| TCCATGGATGCAAACCTCGT+TGG | - | chr5_2:3023054-3023073 | Msa0749490:intron | 50.0% | |
| AGAAACGGAAGAGAGGGAGT+CGG | + | chr5_2:3023209-3023228 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCGCGAGAAATTG+AGG | + | chr5_2:3023232-3023251 | None:intergenic | 50.0% |
| !! | CAAGAGGTCGGTGTTGGAAT+CGG | + | chr5_2:3023427-3023446 | None:intergenic | 50.0% |
| TACTGTCAAACGGAGGTGAG+CGG | + | chr5_2:3023458-3023477 | None:intergenic | 50.0% | |
| ACGGTGATACTGTCAAACGG+AGG | + | chr5_2:3023465-3023484 | None:intergenic | 50.0% | |
| GGAGGCTCACGTTTCCTATT+TGG | + | chr5_2:3023488-3023507 | None:intergenic | 50.0% | |
| ! | TCAAACGGATTCGAGATCGG+TGG | + | chr5_2:3023523-3023542 | None:intergenic | 50.0% |
| GCCAACGAGGTTTGCATCCA+TGG | + | chr5_2:3023058-3023077 | None:intergenic | 55.0% | |
| ! | GTGAAAGGAAGAGAAGCGCG+AGG | + | chr5_2:3023092-3023111 | None:intergenic | 55.0% |
| ACCACCACGGACGACTGTTA+CGG | - | chr5_2:3023164-3023183 | Msa0749490:intron | 55.0% | |
| GTTTCCGTAACAGTCGTCCG+TGG | + | chr5_2:3023171-3023190 | None:intergenic | 55.0% | |
| ! | TTTTCCACCATCGGACCCAC+CGG | - | chr5_2:3023249-3023268 | Msa0749490:intron | 55.0% |
| ACAGTCATCGTCGACATCGC+CGG | + | chr5_2:3023271-3023290 | None:intergenic | 55.0% | |
| TGGAATCGGAGAGGACATCG+CGG | + | chr5_2:3023413-3023432 | None:intergenic | 55.0% | |
| CGATTCCAACACCGACCTCT+TGG | - | chr5_2:3023425-3023444 | Msa0749490:CDS | 55.0% | |
| AATGGCCAAGAGGTCGGTGT+TGG | + | chr5_2:3023433-3023452 | None:intergenic | 55.0% | |
| AAACGGAGGTGAGCGGAGAA+TGG | + | chr5_2:3023451-3023470 | None:intergenic | 55.0% | |
| ! | AACGGATTCGAGATCGGTGG+CGG | + | chr5_2:3023520-3023539 | None:intergenic | 55.0% |
| GCCAACGAGGTTTGCATCCA+TGG | + | chr5_2:3023058-3023077 | None:intergenic | 55.0% | |
| ! | GTGAAAGGAAGAGAAGCGCG+AGG | + | chr5_2:3023092-3023111 | None:intergenic | 55.0% |
| ACCACCACGGACGACTGTTA+CGG | - | chr5_2:3023164-3023183 | Msa0749490:intron | 55.0% | |
| GTTTCCGTAACAGTCGTCCG+TGG | + | chr5_2:3023171-3023190 | None:intergenic | 55.0% | |
| ! | TTTTCCACCATCGGACCCAC+CGG | - | chr5_2:3023249-3023268 | Msa0749490:intron | 55.0% |
| ACAGTCATCGTCGACATCGC+CGG | + | chr5_2:3023271-3023290 | None:intergenic | 55.0% | |
| TGGAATCGGAGAGGACATCG+CGG | + | chr5_2:3023413-3023432 | None:intergenic | 55.0% | |
| CGATTCCAACACCGACCTCT+TGG | - | chr5_2:3023425-3023444 | Msa0749490:CDS | 55.0% | |
| AATGGCCAAGAGGTCGGTGT+TGG | + | chr5_2:3023433-3023452 | None:intergenic | 55.0% | |
| AAACGGAGGTGAGCGGAGAA+TGG | + | chr5_2:3023451-3023470 | None:intergenic | 55.0% | |
| ! | AACGGATTCGAGATCGGTGG+CGG | + | chr5_2:3023520-3023539 | None:intergenic | 55.0% |
| CAATGAGTCCCTCGTGCGTG+TGG | + | chr5_2:3022960-3022979 | None:intergenic | 60.0% | |
| GGTTGGAACGGCGGTGATGA+AGG | + | chr5_2:3023137-3023156 | None:intergenic | 60.0% | |
| !! | GTGGTGGCGTTGGGTTGGAA+CGG | + | chr5_2:3023149-3023168 | None:intergenic | 60.0% |
| GTAACAGTCGTCCGTGGTGG+TGG | + | chr5_2:3023165-3023184 | None:intergenic | 60.0% | |
| TCCGTAACAGTCGTCCGTGG+TGG | + | chr5_2:3023168-3023187 | None:intergenic | 60.0% | |
| ! | CGCGGCACCTTTTCCACCAT+CGG | - | chr5_2:3023240-3023259 | Msa0749490:intron | 60.0% |
| !! | GGTGGGTCCGATGGTGGAAA+AGG | + | chr5_2:3023250-3023269 | None:intergenic | 60.0% |
| TCATCGTCGACATCGCCGGT+GGG | + | chr5_2:3023267-3023286 | None:intergenic | 60.0% | |
| !! | GGTCGGTGTTGGAATCGGAG+AGG | + | chr5_2:3023422-3023441 | None:intergenic | 60.0% |
| GCGGAGAATGGCCAAGAGGT+CGG | + | chr5_2:3023439-3023458 | None:intergenic | 60.0% | |
| GTGAGCGGAGAATGGCCAAG+AGG | + | chr5_2:3023443-3023462 | None:intergenic | 60.0% | |
| CAATGAGTCCCTCGTGCGTG+TGG | + | chr5_2:3022960-3022979 | None:intergenic | 60.0% | |
| GGTTGGAACGGCGGTGATGA+AGG | + | chr5_2:3023137-3023156 | None:intergenic | 60.0% | |
| !! | GTGGTGGCGTTGGGTTGGAA+CGG | + | chr5_2:3023149-3023168 | None:intergenic | 60.0% |
| GTAACAGTCGTCCGTGGTGG+TGG | + | chr5_2:3023165-3023184 | None:intergenic | 60.0% | |
| TCCGTAACAGTCGTCCGTGG+TGG | + | chr5_2:3023168-3023187 | None:intergenic | 60.0% | |
| ! | CGCGGCACCTTTTCCACCAT+CGG | - | chr5_2:3023240-3023259 | Msa0749490:intron | 60.0% |
| !! | GGTGGGTCCGATGGTGGAAA+AGG | + | chr5_2:3023250-3023269 | None:intergenic | 60.0% |
| TCATCGTCGACATCGCCGGT+GGG | + | chr5_2:3023267-3023286 | None:intergenic | 60.0% | |
| !! | GGTCGGTGTTGGAATCGGAG+AGG | + | chr5_2:3023422-3023441 | None:intergenic | 60.0% |
| GCGGAGAATGGCCAAGAGGT+CGG | + | chr5_2:3023439-3023458 | None:intergenic | 60.0% | |
| GTGAGCGGAGAATGGCCAAG+AGG | + | chr5_2:3023443-3023462 | None:intergenic | 60.0% | |
| !! | GTGGCGTTGGGTTGGAACGG+CGG | + | chr5_2:3023146-3023165 | None:intergenic | 65.0% |
| CCAACCCAACGCCACCACCA+CGG | - | chr5_2:3023151-3023170 | Msa0749490:intron | 65.0% | |
| !! | TCGTCCGTGGTGGTGGCGTT+GGG | + | chr5_2:3023158-3023177 | None:intergenic | 65.0% |
| GTCATCGTCGACATCGCCGG+TGG | + | chr5_2:3023268-3023287 | None:intergenic | 65.0% | |
| GAGAGGACATCGCGGCAGAG+AGG | + | chr5_2:3023405-3023424 | None:intergenic | 65.0% | |
| !! | GTGGCGTTGGGTTGGAACGG+CGG | + | chr5_2:3023146-3023165 | None:intergenic | 65.0% |
| CCAACCCAACGCCACCACCA+CGG | - | chr5_2:3023151-3023170 | Msa0749490:intron | 65.0% | |
| !! | TCGTCCGTGGTGGTGGCGTT+GGG | + | chr5_2:3023158-3023177 | None:intergenic | 65.0% |
| GTCATCGTCGACATCGCCGG+TGG | + | chr5_2:3023268-3023287 | None:intergenic | 65.0% | |
| GAGAGGACATCGCGGCAGAG+AGG | + | chr5_2:3023405-3023424 | None:intergenic | 65.0% | |
| !! | CCGTGGTGGTGGCGTTGGGT+TGG | + | chr5_2:3023154-3023173 | None:intergenic | 70.0% |
| !! | GTCGTCCGTGGTGGTGGCGT+TGG | + | chr5_2:3023159-3023178 | None:intergenic | 70.0% |
| ATCGCCGGTGGGTCCGATGG+TGG | + | chr5_2:3023256-3023275 | None:intergenic | 70.0% | |
| GACATCGCCGGTGGGTCCGA+TGG | + | chr5_2:3023259-3023278 | None:intergenic | 70.0% | |
| ! | GATCGGTGGCGGTTTCGCGC+CGG | + | chr5_2:3023509-3023528 | None:intergenic | 70.0% |
| !! | CCGTGGTGGTGGCGTTGGGT+TGG | + | chr5_2:3023154-3023173 | None:intergenic | 70.0% |
| !! | GTCGTCCGTGGTGGTGGCGT+TGG | + | chr5_2:3023159-3023178 | None:intergenic | 70.0% |
| ATCGCCGGTGGGTCCGATGG+TGG | + | chr5_2:3023256-3023275 | None:intergenic | 70.0% | |
| GACATCGCCGGTGGGTCCGA+TGG | + | chr5_2:3023259-3023278 | None:intergenic | 70.0% | |
| ! | GATCGGTGGCGGTTTCGCGC+CGG | + | chr5_2:3023509-3023528 | None:intergenic | 70.0% |
| !! | CGGTGGCGGTTTCGCGCCGG+AGG | + | chr5_2:3023506-3023525 | None:intergenic | 80.0% |
| !! | CGGTGGCGGTTTCGCGCCGG+AGG | + | chr5_2:3023506-3023525 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 3022247 | 3023542 | 3022247 | ID=Msa0749490;Name=Msa0749490 |
| chr5_2 | mRNA | 3022247 | 3023542 | 3022247 | ID=Msa0749490-mRNA-1;Parent=Msa0749490;Name=Msa0749490-mRNA-1;_AED=0.74;_eAED=0.74;_QI=0|0|0|1|0|0|2|0|288 |
| chr5_2 | exon | 3023404 | 3023542 | 3023404 | ID=Msa0749490-mRNA-1:exon:1044;Parent=Msa0749490-mRNA-1 |
| chr5_2 | exon | 3022247 | 3022974 | 3022247 | ID=Msa0749490-mRNA-1:exon:1043;Parent=Msa0749490-mRNA-1 |
| chr5_2 | CDS | 3023404 | 3023542 | 3023404 | ID=Msa0749490-mRNA-1:cds;Parent=Msa0749490-mRNA-1 |
| chr5_2 | CDS | 3022247 | 3022974 | 3022247 | ID=Msa0749490-mRNA-1:cds;Parent=Msa0749490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
