Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793920 | sp|Q9LY41|ATL4_ARATH | 42.017 | 119 | 56 | 4 | 170 | 281 | 88 | 200 | 1.61e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793920 | G7LDE0 | 44.578 | 166 | 61 | 6 | 135 | 278 | 23 | 179 | 4.76e-26 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050730 | Msa0793920 | 0.811238 | 7.737498e-51 | -8.615850e-47 |
| Msa0050760 | Msa0793920 | 0.821364 | 4.199885e-53 | -8.615850e-47 |
| Msa0092990 | Msa0793920 | 0.801584 | 8.405951e-49 | -8.615850e-47 |
| Msa0094100 | Msa0793920 | 0.809230 | 2.096816e-50 | -8.615850e-47 |
| Msa0096450 | Msa0793920 | 0.820213 | 7.725930e-53 | -8.615850e-47 |
| Msa0105340 | Msa0793920 | 0.807155 | 5.801842e-50 | -8.615850e-47 |
| Msa0610590 | Msa0793920 | 0.825646 | 4.185769e-54 | -8.615850e-47 |
| Msa0651190 | Msa0793920 | 0.818495 | 1.902864e-52 | -8.615850e-47 |
| Msa0662650 | Msa0793920 | 0.813189 | 2.902439e-51 | -8.615850e-47 |
| Msa0708860 | Msa0793920 | 0.812594 | 3.919739e-51 | -8.615850e-47 |
| Msa0743260 | Msa0793920 | 0.808957 | 2.398568e-50 | -8.615850e-47 |
| Msa0749490 | Msa0793920 | 0.961179 | 2.109693e-119 | -8.615850e-47 |
| Msa0749520 | Msa0793920 | 0.882403 | 1.073073e-70 | -8.615850e-47 |
| Msa0767080 | Msa0793920 | 0.827679 | 1.369247e-54 | -8.615850e-47 |
| Msa0775260 | Msa0793920 | 0.801527 | 8.633227e-49 | -8.615850e-47 |
| Msa0793920 | Msa0831420 | 0.962049 | 2.043113e-120 | -8.615850e-47 |
| Msa0793920 | Msa0846810 | 0.801170 | 1.021736e-48 | -8.615850e-47 |
| Msa0793920 | Msa0853170 | 0.806445 | 8.199868e-50 | -8.615850e-47 |
| Msa0793920 | Msa0896210 | 0.817833 | 2.685914e-52 | -8.615850e-47 |
| Msa0793920 | Msa0896220 | 0.823665 | 1.225946e-53 | -8.615850e-47 |
| Msa0793920 | Msa0910980 | -0.801529 | 8.625468e-49 | -8.615850e-47 |
| Msa0793920 | Msa0927670 | 0.807367 | 5.233786e-50 | -8.615850e-47 |
| Msa0793920 | Msa0956390 | 0.811358 | 7.287102e-51 | -8.615850e-47 |
| Msa0793920 | Msa0960160 | 0.809116 | 2.218407e-50 | -8.615850e-47 |
| Msa0793920 | Msa0961420 | -0.801858 | 7.384051e-49 | -8.615850e-47 |
| Msa0793920 | Msa0991670 | 0.806421 | 8.292556e-50 | -8.615850e-47 |
| Msa0793920 | Msa0996080 | 0.804981 | 1.664018e-49 | -8.615850e-47 |
| Msa0793920 | Msa1030970 | 0.804716 | 1.890213e-49 | -8.615850e-47 |
| Msa0793920 | Msa1075220 | -0.808037 | 3.770434e-50 | -8.615850e-47 |
| Msa0793920 | Msa1085300 | 0.813358 | 2.665521e-51 | -8.615850e-47 |
| Msa0793920 | Msa1097840 | 0.808899 | 2.468159e-50 | -8.615850e-47 |
| Msa0793920 | Msa1131940 | -0.811283 | 7.566638e-51 | -8.615850e-47 |
| Msa0793920 | Msa1162550 | -0.801299 | 9.616140e-49 | -8.615850e-47 |
| Msa0793920 | Msa1205010 | -0.808853 | 2.525150e-50 | -8.615850e-47 |
| Msa0793920 | Msa1211150 | -0.801922 | 7.163431e-49 | -8.615850e-47 |
| Msa0793920 | Msa1217810 | 0.811451 | 6.957050e-51 | -8.615850e-47 |
| Msa0793920 | Msa1252070 | 0.802728 | 4.887949e-49 | -8.615850e-47 |
| Msa0793920 | Msa1322190 | 0.807673 | 4.505502e-50 | -8.615850e-47 |
| Msa0793920 | Msa1340650 | 0.806274 | 8.908626e-50 | -8.615850e-47 |
| Msa0793920 | Msa1440600 | 0.822664 | 2.099309e-53 | -8.615850e-47 |
| Msa0793920 | Msa1441190 | 0.810148 | 1.330946e-50 | -8.615850e-47 |
| Msa0793920 | Msa1451620 | -0.811561 | 6.584192e-51 | -8.615850e-47 |
| Msa0203170 | Msa0793920 | 0.804971 | 1.671988e-49 | -8.615850e-47 |
| Msa0449760 | Msa0793920 | 0.828624 | 8.105379e-55 | -8.615850e-47 |
| Msa0458440 | Msa0793920 | 0.801579 | 8.422831e-49 | -8.615850e-47 |
| Msa0480320 | Msa0793920 | 0.805812 | 1.114133e-49 | -8.615850e-47 |
| Msa0265820 | Msa0793920 | 0.801546 | 8.557609e-49 | -8.615850e-47 |
| Msa0269450 | Msa0793920 | 0.807717 | 4.410120e-50 | -8.615850e-47 |
| Msa0282250 | Msa0793920 | 0.810237 | 1.273890e-50 | -8.615850e-47 |
| Msa0296760 | Msa0793920 | 0.824667 | 7.127514e-54 | -8.615850e-47 |
| Msa0315290 | Msa0793920 | 0.818859 | 1.572864e-52 | -8.615850e-47 |
| Msa0342340 | Msa0793920 | -0.804016 | 2.644923e-49 | -8.615850e-47 |
| Msa0536220 | Msa0793920 | 0.800396 | 1.469993e-48 | -8.615850e-47 |
| Msa0578970 | Msa0793920 | 0.822313 | 2.532471e-53 | -8.615850e-47 |
| Msa0587690 | Msa0793920 | 0.804835 | 1.785185e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793920 | MtrunA17_Chr8g0336881 | 44.578 | 166 | 61 | 6 | 135 | 278 | 23 | 179 | 9.16e-30 | 114 |
| Msa0793920 | MtrunA17_Chr8g0347461 | 50.000 | 112 | 44 | 5 | 176 | 284 | 117 | 219 | 5.73e-21 | 90.1 |
| Msa0793920 | MtrunA17_Chr2g0301871 | 47.321 | 112 | 47 | 5 | 179 | 284 | 63 | 168 | 7.49e-21 | 90.1 |
| Msa0793920 | MtrunA17_Chr5g0409211 | 32.031 | 128 | 71 | 7 | 131 | 246 | 13 | 136 | 3.88e-14 | 69.3 |
| Msa0793920 | MtrunA17_Chr3g0133001 | 40.541 | 74 | 32 | 3 | 175 | 246 | 135 | 198 | 1.76e-12 | 67.0 |
| Msa0793920 | MtrunA17_Chr5g0409201 | 30.303 | 132 | 77 | 5 | 126 | 246 | 8 | 135 | 3.11e-12 | 63.5 |
| Msa0793920 | MtrunA17_Chr5g0427431 | 35.789 | 95 | 45 | 4 | 159 | 246 | 117 | 202 | 5.92e-12 | 65.5 |
| Msa0793920 | MtrunA17_Chr6g0486651 | 31.902 | 163 | 82 | 7 | 100 | 246 | 12 | 161 | 1.25e-11 | 64.3 |
| Msa0793920 | MtrunA17_Chr3g0123641 | 28.276 | 145 | 86 | 5 | 132 | 269 | 2 | 135 | 1.93e-11 | 62.8 |
| Msa0793920 | MtrunA17_Chr1g0148631 | 45.455 | 55 | 30 | 0 | 202 | 256 | 338 | 392 | 2.12e-11 | 63.9 |
| Msa0793920 | MtrunA17_Chr8g0388231 | 30.534 | 131 | 74 | 6 | 127 | 247 | 257 | 380 | 2.33e-11 | 63.9 |
| Msa0793920 | MtrunA17_Chr3g0123631 | 29.008 | 131 | 80 | 5 | 132 | 255 | 2 | 126 | 2.43e-11 | 61.6 |
| Msa0793920 | MtrunA17_Chr7g0275601 | 27.200 | 125 | 78 | 4 | 136 | 247 | 27 | 151 | 2.59e-11 | 60.8 |
| Msa0793920 | MtrunA17_Chr6g0451051 | 30.400 | 125 | 74 | 3 | 136 | 259 | 9 | 121 | 4.14e-11 | 60.1 |
| Msa0793920 | MtrunA17_Chr8g0364881 | 46.753 | 77 | 31 | 3 | 176 | 251 | 74 | 141 | 4.98e-11 | 62.4 |
| Msa0793920 | MtrunA17_Chr2g0305161 | 40.678 | 59 | 35 | 0 | 191 | 249 | 128 | 186 | 5.09e-11 | 60.8 |
| Msa0793920 | MtrunA17_Chr3g0112041 | 42.105 | 57 | 31 | 1 | 192 | 246 | 198 | 254 | 6.10e-11 | 61.6 |
| Msa0793920 | MtrunA17_Chr6g0451161 | 44.156 | 77 | 33 | 3 | 174 | 249 | 137 | 204 | 6.34e-11 | 62.4 |
| Msa0793920 | MtrunA17_Chr7g0274741 | 47.059 | 51 | 26 | 1 | 204 | 253 | 98 | 148 | 6.96e-11 | 60.1 |
| Msa0793920 | MtrunA17_Chr4g0031911 | 43.396 | 53 | 28 | 1 | 196 | 246 | 198 | 250 | 7.97e-11 | 61.2 |
| Msa0793920 | MtrunA17_Chr3g0138451 | 35.000 | 80 | 50 | 2 | 177 | 255 | 289 | 367 | 8.37e-11 | 62.0 |
| Msa0793920 | MtrunA17_Chr4g0059161 | 38.824 | 85 | 38 | 3 | 162 | 246 | 206 | 276 | 8.82e-11 | 62.0 |
| Msa0793920 | MtrunA17_Chr2g0307411 | 44.643 | 56 | 30 | 1 | 195 | 249 | 90 | 145 | 9.40e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793920 | AT3G60220.1 | 42.017 | 119 | 56 | 4 | 170 | 281 | 88 | 200 | 1.64e-18 | 84.7 |
| Msa0793920 | AT4G32600.1 | 34.545 | 110 | 51 | 3 | 165 | 256 | 308 | 414 | 2.22e-13 | 70.5 |
| Msa0793920 | AT4G32600.2 | 34.545 | 110 | 51 | 3 | 165 | 256 | 308 | 414 | 2.22e-13 | 70.5 |
| Msa0793920 | AT1G35330.1 | 31.395 | 172 | 86 | 8 | 131 | 279 | 44 | 206 | 5.12e-13 | 68.6 |
| Msa0793920 | AT3G18930.2 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 6.22e-13 | 68.9 |
| Msa0793920 | AT3G18930.3 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 6.22e-13 | 68.9 |
| Msa0793920 | AT3G18930.1 | 41.558 | 77 | 43 | 2 | 175 | 249 | 125 | 201 | 6.22e-13 | 68.9 |
| Msa0793920 | AT3G48030.1 | 46.250 | 80 | 34 | 3 | 176 | 254 | 186 | 257 | 6.44e-13 | 68.6 |
| Msa0793920 | AT1G80400.1 | 33.333 | 102 | 53 | 2 | 168 | 254 | 303 | 404 | 6.50e-13 | 68.9 |
| Msa0793920 | AT3G48030.2 | 46.250 | 80 | 34 | 3 | 176 | 254 | 108 | 179 | 9.28e-13 | 67.4 |
| Msa0793920 | AT4G28890.1 | 43.421 | 76 | 33 | 3 | 176 | 250 | 103 | 169 | 1.00e-12 | 68.2 |
| Msa0793920 | AT5G57750.1 | 47.945 | 73 | 29 | 3 | 176 | 247 | 101 | 165 | 1.56e-12 | 65.9 |
| Msa0793920 | AT4G11680.1 | 33.673 | 98 | 48 | 3 | 176 | 256 | 293 | 390 | 1.69e-11 | 64.7 |
| Msa0793920 | AT1G20823.1 | 43.284 | 67 | 37 | 1 | 184 | 249 | 90 | 156 | 1.85e-11 | 62.4 |
| Msa0793920 | AT1G76410.1 | 33.333 | 120 | 72 | 4 | 132 | 249 | 36 | 149 | 2.54e-11 | 62.0 |
| Msa0793920 | AT1G23980.1 | 44.156 | 77 | 33 | 3 | 174 | 249 | 122 | 189 | 3.12e-11 | 63.5 |
| Msa0793920 | AT2G20030.1 | 35.714 | 112 | 57 | 5 | 176 | 286 | 104 | 201 | 3.34e-11 | 63.5 |
| Msa0793920 | AT2G15580.1 | 53.488 | 43 | 20 | 0 | 204 | 246 | 149 | 191 | 4.27e-11 | 61.6 |
| Msa0793920 | AT4G40070.1 | 26.471 | 204 | 116 | 10 | 101 | 288 | 14 | 199 | 6.49e-11 | 62.4 |
| Msa0793920 | AT3G47990.3 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 6.61e-11 | 62.4 |
| Msa0793920 | AT3G47990.5 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 6.61e-11 | 62.4 |
| Msa0793920 | AT3G47990.4 | 36.000 | 100 | 50 | 3 | 164 | 262 | 150 | 236 | 6.61e-11 | 62.4 |
| Msa0793920 | AT5G05810.1 | 40.541 | 74 | 32 | 3 | 175 | 246 | 125 | 188 | 6.82e-11 | 62.8 |
| Msa0793920 | AT4G35480.1 | 43.750 | 64 | 34 | 2 | 193 | 255 | 102 | 164 | 7.04e-11 | 60.8 |
| Msa0793920 | AT4G09130.1 | 32.174 | 115 | 65 | 4 | 175 | 288 | 96 | 198 | 9.26e-11 | 62.0 |
| Msa0793920 | AT3G47990.2 | 36.000 | 100 | 50 | 3 | 164 | 262 | 191 | 277 | 9.79e-11 | 62.0 |
Find 72 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGCTCACGTTTCCTATT+TGG | 0.229228 | 5_3:-5749765 | None:intergenic |
| CAATGAGTCCCTCGTGCGTT+TGG | 0.365898 | 5_3:-5749237 | None:intergenic |
| GTCGTCCGTGGTGGTGGCGT+TGG | 0.373084 | 5_3:-5749436 | None:intergenic |
| GCCAACGAGGTTTGCATCCA+TGG | 0.419497 | 5_3:-5749335 | None:intergenic |
| GACAGTATCACCGTCCAAAT+AGG | 0.426859 | 5_3:+5749751 | Msa0793920:CDS |
| TTTAACAGCTTGAGTATTGT+TGG | 0.429356 | 5_3:-5748579 | None:intergenic |
| CCGTGGTGGTGGCGTTGGGT+TGG | 0.435131 | 5_3:-5749431 | None:intergenic |
| TTGAGGAGAAACGGAAGAGA+GGG | 0.448642 | 5_3:-5749492 | None:intergenic |
| CGATTCCAACACCGACCTCT+TGG | 0.451236 | 5_3:+5749705 | Msa0793920:CDS |
| TCGTCCGTGGTGGTGGCGTT+GGG | 0.454118 | 5_3:-5749435 | None:intergenic |
| CAACCATTGTTGAGACATGA+TGG | 0.466296 | 5_3:-5748603 | None:intergenic |
| CAAGAGGTCGGTGTTGGAAT+CGG | 0.472953 | 5_3:-5749704 | None:intergenic |
| CTTCCGACGGCTCCGTCAAA+CGG | 0.483665 | 5_3:-5749815 | None:intergenic |
| ATTGTTGGCCACGGATGGAT+TGG | 0.484950 | 5_3:-5748564 | None:intergenic |
| GTAACAGTCGTCCGTGGTGG+TGG | 0.486562 | 5_3:-5749442 | None:intergenic |
| GGTGGGTCCGATGGTGGAAA+AGG | 0.488594 | 5_3:-5749527 | None:intergenic |
| GAGTGAAAAGCGTGGAAACA+TGG | 0.489948 | 5_3:-5749619 | None:intergenic |
| ATTGAGGAGAAACGGAAGAG+AGG | 0.499378 | 5_3:-5749493 | None:intergenic |
| AAATAGGAAACGTGAGCCTC+CGG | 0.500001 | 5_3:+5749767 | Msa0793920:CDS |
| GGTTGGAACGGCGGTGATGA+AGG | 0.500084 | 5_3:-5749414 | None:intergenic |
| TGAGTATTGTTGGCCACGGA+TGG | 0.500791 | 5_3:-5748569 | None:intergenic |
| CCGATCTCGAATCCGTTTGA+CGG | 0.501263 | 5_3:+5749803 | Msa0793920:CDS |
| CGCGAGAAATTGAGGAGAAA+CGG | 0.509382 | 5_3:-5749501 | None:intergenic |
| GACATCGCCGGTGGGTCCGA+TGG | 0.510113 | 5_3:-5749536 | None:intergenic |
| AAAGGTGCCGCGAGAAATTG+AGG | 0.516065 | 5_3:-5749509 | None:intergenic |
| AAACGGAGGTGAGCGGAGAA+TGG | 0.521841 | 5_3:-5749728 | None:intergenic |
| ACCACCACGGACGACTGTTA+CGG | 0.525467 | 5_3:+5749444 | Msa0793920:CDS |
| AACGGATTCGAGATCGGTGG+CGG | 0.526950 | 5_3:-5749797 | None:intergenic |
| TTGTATGCTAGAATAATCAT+TGG | 0.536757 | 5_3:-5748524 | None:intergenic |
| ATCGCCGGTGGGTCCGATGG+TGG | 0.537352 | 5_3:-5749533 | None:intergenic |
| AATGCTACAAACATATAAGA+AGG | 0.541568 | 5_3:+5749200 | Msa0793920:CDS |
| GTGGTGGCGTTGGGTTGGAA+CGG | 0.541959 | 5_3:-5749426 | None:intergenic |
| AGCTTGAGTATTGTTGGCCA+CGG | 0.547462 | 5_3:-5748573 | None:intergenic |
| GTGGCGTTGGGTTGGAACGG+CGG | 0.551299 | 5_3:-5749423 | None:intergenic |
| AATGGCCAAGAGGTCGGTGT+TGG | 0.552990 | 5_3:-5749710 | None:intergenic |
| GATCGGTGGCGGTTTCGCGC+CGG | 0.557217 | 5_3:-5749786 | None:intergenic |
| CGGTGGCGGTTTCGCGCCGG+AGG | 0.559519 | 5_3:-5749783 | None:intergenic |
| TCCATGGATGCAAACCTCGT+TGG | 0.561231 | 5_3:+5749334 | Msa0793920:CDS |
| ACTCTTACTGCATAAGCAGA+TGG | 0.563965 | 5_3:+5749638 | Msa0793920:CDS |
| GCAATTGTGAAACGAGTGAA+AGG | 0.566267 | 5_3:-5749384 | None:intergenic |
| AAAGCAAAACCAAACGCACG+AGG | 0.574158 | 5_3:+5749228 | Msa0793920:CDS |
| AACGAAGCATGTCGTTGTTG+CGG | 0.577997 | 5_3:-5749591 | None:intergenic |
| GTCATCGTCGACATCGCCGG+TGG | 0.578999 | 5_3:-5749545 | None:intergenic |
| CCGTCAAACGGATTCGAGAT+CGG | 0.580404 | 5_3:-5749803 | None:intergenic |
| ACAGTCATCGTCGACATCGC+CGG | 0.580449 | 5_3:-5749548 | None:intergenic |
| GACGACTGTTACGGAAACAT+TGG | 0.585613 | 5_3:+5749453 | Msa0793920:CDS |
| CTAGCATACAAGTTTGCTCG+TGG | 0.587303 | 5_3:+5748536 | Msa0793920:CDS |
| AGTGAAAAGCGTGGAAACAT+GGG | 0.589501 | 5_3:-5749618 | None:intergenic |
| CCATGGAGTGAAACGAAAAG+AGG | 0.589662 | 5_3:-5749318 | None:intergenic |
| TGGACGGTGATACTGTCAAA+CGG | 0.597045 | 5_3:-5749745 | None:intergenic |
| GCTCACGTTTCCTATTTGGA+CGG | 0.601842 | 5_3:-5749761 | None:intergenic |
| CGTTTCTCCTCAATTTCTCG+CGG | 0.602815 | 5_3:+5749502 | Msa0793920:CDS |
| AGAGAGAAAGAAATGCGTTG+TGG | 0.618174 | 5_3:-5749289 | None:intergenic |
| GCGGAGAATGGCCAAGAGGT+CGG | 0.629982 | 5_3:-5749716 | None:intergenic |
| AGAAACGGAAGAGAGGGAGT+CGG | 0.630762 | 5_3:-5749486 | None:intergenic |
| TCCGTAACAGTCGTCCGTGG+TGG | 0.641987 | 5_3:-5749445 | None:intergenic |
| GTGAAAGGAAGAGAAGCGCG+AGG | 0.644848 | 5_3:-5749369 | None:intergenic |
| TGCAGTAAGAGTGAAAAGCG+TGG | 0.645395 | 5_3:-5749627 | None:intergenic |
| GTTTCCGTAACAGTCGTCCG+TGG | 0.645896 | 5_3:-5749448 | None:intergenic |
| AAACCATCATGTCTCAACAA+TGG | 0.647470 | 5_3:+5748600 | Msa0793920:CDS |
| TACTGTCAAACGGAGGTGAG+CGG | 0.656369 | 5_3:-5749735 | None:intergenic |
| GAGAGGACATCGCGGCAGAG+AGG | 0.671800 | 5_3:-5749682 | None:intergenic |
| TCATCGTCGACATCGCCGGT+GGG | 0.672625 | 5_3:-5749544 | None:intergenic |
| TGGAGAAACCAATCCATCCG+TGG | 0.675735 | 5_3:+5748556 | Msa0793920:CDS |
| AAGCAAAACCAAACGCACGA+GGG | 0.694908 | 5_3:+5749229 | Msa0793920:CDS |
| TCAAACGGATTCGAGATCGG+TGG | 0.696292 | 5_3:-5749800 | None:intergenic |
| CCAACCCAACGCCACCACCA+CGG | 0.700116 | 5_3:+5749431 | Msa0793920:CDS |
| GTGAGCGGAGAATGGCCAAG+AGG | 0.707678 | 5_3:-5749720 | None:intergenic |
| GGTCGGTGTTGGAATCGGAG+AGG | 0.717591 | 5_3:-5749699 | None:intergenic |
| GGAAAATGAGAAAGCCAACG+AGG | 0.717650 | 5_3:-5749348 | None:intergenic |
| TGGAATCGGAGAGGACATCG+CGG | 0.769053 | 5_3:-5749690 | None:intergenic |
| ACGGTGATACTGTCAAACGG+AGG | 0.799114 | 5_3:-5749742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAACCATGTAATTTT+TGG | - | chr5_3:5748655-5748674 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+GGG | - | chr5_3:5748833-5748852 | None:intergenic | 15.0% |
| !!! | TTATTAAACCATGTAATTTT+TGG | - | chr5_3:5748655-5748674 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+GGG | - | chr5_3:5748833-5748852 | None:intergenic | 15.0% |
| !!! | GTCATTTTCTCAAATTATTA+TGG | - | chr5_3:5748834-5748853 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTAATTGTTTT+TGG | - | chr5_3:5748958-5748977 | None:intergenic | 20.0% |
| !!! | CTATTTTTTCATGAAATTTC+AGG | - | chr5_3:5749061-5749080 | None:intergenic | 20.0% |
| !!! | GTCATTTTCTCAAATTATTA+TGG | - | chr5_3:5748834-5748853 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTAATTGTTTT+TGG | - | chr5_3:5748958-5748977 | None:intergenic | 20.0% |
| !!! | CTATTTTTTCATGAAATTTC+AGG | - | chr5_3:5749061-5749080 | None:intergenic | 20.0% |
| !!! | ACCATGTAATTTTTGGTTTA+GGG | - | chr5_3:5748648-5748667 | None:intergenic | 25.0% |
| !!! | AACCATGTAATTTTTGGTTT+AGG | - | chr5_3:5748649-5748668 | None:intergenic | 25.0% |
| ! | ATGAAATTTCAGATGTATAG+TGG | - | chr5_3:5748704-5748723 | None:intergenic | 25.0% |
| ! | ATGAAACACCAATATAGATA+CGG | + | chr5_3:5748771-5748790 | Msa0793920:intron | 25.0% |
| ! | GCATGTTTGTTTAGAAATTT+CGG | + | chr5_3:5748917-5748936 | Msa0793920:intron | 25.0% |
| ! | TGGAAATTTATTCCATTGTA+AGG | - | chr5_3:5749027-5749046 | None:intergenic | 25.0% |
| ! | AATGCTACAAACATATAAGA+AGG | + | chr5_3:5749200-5749219 | Msa0793920:CDS | 25.0% |
| !!! | ACCATGTAATTTTTGGTTTA+GGG | - | chr5_3:5748648-5748667 | None:intergenic | 25.0% |
| !!! | AACCATGTAATTTTTGGTTT+AGG | - | chr5_3:5748649-5748668 | None:intergenic | 25.0% |
| ! | ATGAAATTTCAGATGTATAG+TGG | - | chr5_3:5748704-5748723 | None:intergenic | 25.0% |
| ! | ATGAAACACCAATATAGATA+CGG | + | chr5_3:5748771-5748790 | Msa0793920:intron | 25.0% |
| ! | GCATGTTTGTTTAGAAATTT+CGG | + | chr5_3:5748917-5748936 | Msa0793920:intron | 25.0% |
| ! | TGGAAATTTATTCCATTGTA+AGG | - | chr5_3:5749027-5749046 | None:intergenic | 25.0% |
| ! | AATGCTACAAACATATAAGA+AGG | + | chr5_3:5749200-5749219 | Msa0793920:CDS | 25.0% |
| ! | TTTAACAGCTTGAGTATTGT+TGG | - | chr5_3:5748582-5748601 | None:intergenic | 30.0% |
| !!! | CCATGTAATTTTTGGTTTAG+GGG | - | chr5_3:5748647-5748666 | None:intergenic | 30.0% |
| GGTTTAATAAAGAACTCGTA+TGG | + | chr5_3:5748665-5748684 | Msa0793920:intron | 30.0% | |
| AATTTCAGATGTATAGTGGT+TGG | - | chr5_3:5748700-5748719 | None:intergenic | 30.0% | |
| CATGAAAAATAACCAGACAA+TGG | + | chr5_3:5748721-5748740 | Msa0793920:intron | 30.0% | |
| TGATATGTCCGTATCTATAT+TGG | - | chr5_3:5748782-5748801 | None:intergenic | 30.0% | |
| !!! | CATTGTAAGGTTTGTTTTGA+GGG | - | chr5_3:5749014-5749033 | None:intergenic | 30.0% |
| ! | TCGTATTTGTTCGTGTTTTA+TGG | - | chr5_3:5749114-5749133 | None:intergenic | 30.0% |
| ! | TTTAACAGCTTGAGTATTGT+TGG | - | chr5_3:5748582-5748601 | None:intergenic | 30.0% |
| !!! | CCATGTAATTTTTGGTTTAG+GGG | - | chr5_3:5748647-5748666 | None:intergenic | 30.0% |
| GGTTTAATAAAGAACTCGTA+TGG | + | chr5_3:5748665-5748684 | Msa0793920:intron | 30.0% | |
| AATTTCAGATGTATAGTGGT+TGG | - | chr5_3:5748700-5748719 | None:intergenic | 30.0% | |
| CATGAAAAATAACCAGACAA+TGG | + | chr5_3:5748721-5748740 | Msa0793920:intron | 30.0% | |
| TGATATGTCCGTATCTATAT+TGG | - | chr5_3:5748782-5748801 | None:intergenic | 30.0% | |
| !!! | CATTGTAAGGTTTGTTTTGA+GGG | - | chr5_3:5749014-5749033 | None:intergenic | 30.0% |
| ! | TCGTATTTGTTCGTGTTTTA+TGG | - | chr5_3:5749114-5749133 | None:intergenic | 30.0% |
| AAACCATCATGTCTCAACAA+TGG | + | chr5_3:5748600-5748619 | Msa0793920:CDS | 35.0% | |
| CCCCTAAACCAAAAATTACA+TGG | + | chr5_3:5748644-5748663 | Msa0793920:CDS | 35.0% | |
| ! | TTTTGTTACTGTCCATTGTC+TGG | - | chr5_3:5748736-5748755 | None:intergenic | 35.0% |
| !!! | CCATTGTAAGGTTTGTTTTG+AGG | - | chr5_3:5749015-5749034 | None:intergenic | 35.0% |
| CCTCAAAACAAACCTTACAA+TGG | + | chr5_3:5749012-5749031 | Msa0793920:intron | 35.0% | |
| ! | AATTTCAGGTGTATAGTGAC+TGG | - | chr5_3:5749047-5749066 | None:intergenic | 35.0% |
| ! | TGTTTTATGGTGTGATTGGT+TGG | - | chr5_3:5749101-5749120 | None:intergenic | 35.0% |
| ! | TTCGTGTTTTATGGTGTGAT+TGG | - | chr5_3:5749105-5749124 | None:intergenic | 35.0% |
| ! | GACACAACACTAACTTTTTG+CGG | + | chr5_3:5749140-5749159 | Msa0793920:CDS | 35.0% |
| ! | ACACAACACTAACTTTTTGC+GGG | + | chr5_3:5749141-5749160 | Msa0793920:CDS | 35.0% |
| AAACCATCATGTCTCAACAA+TGG | + | chr5_3:5748600-5748619 | Msa0793920:CDS | 35.0% | |
| CCCCTAAACCAAAAATTACA+TGG | + | chr5_3:5748644-5748663 | Msa0793920:CDS | 35.0% | |
| ! | TTTTGTTACTGTCCATTGTC+TGG | - | chr5_3:5748736-5748755 | None:intergenic | 35.0% |
| !!! | CCATTGTAAGGTTTGTTTTG+AGG | - | chr5_3:5749015-5749034 | None:intergenic | 35.0% |
| CCTCAAAACAAACCTTACAA+TGG | + | chr5_3:5749012-5749031 | Msa0793920:intron | 35.0% | |
| ! | AATTTCAGGTGTATAGTGAC+TGG | - | chr5_3:5749047-5749066 | None:intergenic | 35.0% |
| ! | TGTTTTATGGTGTGATTGGT+TGG | - | chr5_3:5749101-5749120 | None:intergenic | 35.0% |
| ! | TTCGTGTTTTATGGTGTGAT+TGG | - | chr5_3:5749105-5749124 | None:intergenic | 35.0% |
| ! | GACACAACACTAACTTTTTG+CGG | + | chr5_3:5749140-5749159 | Msa0793920:CDS | 35.0% |
| ! | ACACAACACTAACTTTTTGC+GGG | + | chr5_3:5749141-5749160 | Msa0793920:CDS | 35.0% |
| CAACCATTGTTGAGACATGA+TGG | - | chr5_3:5748606-5748625 | None:intergenic | 40.0% | |
| TGAATGTGACTTCATGTGTC+AGG | + | chr5_3:5748859-5748878 | Msa0793920:intron | 40.0% | |
| GAATGTGACTTCATGTGTCA+GGG | + | chr5_3:5748860-5748879 | Msa0793920:intron | 40.0% | |
| AGAGAGAAAGAAATGCGTTG+TGG | - | chr5_3:5749292-5749311 | None:intergenic | 40.0% | |
| GCAATTGTGAAACGAGTGAA+AGG | - | chr5_3:5749387-5749406 | None:intergenic | 40.0% | |
| ! | AGTGAAAAGCGTGGAAACAT+GGG | - | chr5_3:5749621-5749640 | None:intergenic | 40.0% |
| ACTCTTACTGCATAAGCAGA+TGG | + | chr5_3:5749638-5749657 | Msa0793920:CDS | 40.0% | |
| CAACCATTGTTGAGACATGA+TGG | - | chr5_3:5748606-5748625 | None:intergenic | 40.0% | |
| TGAATGTGACTTCATGTGTC+AGG | + | chr5_3:5748859-5748878 | Msa0793920:intron | 40.0% | |
| GAATGTGACTTCATGTGTCA+GGG | + | chr5_3:5748860-5748879 | Msa0793920:intron | 40.0% | |
| AGAGAGAAAGAAATGCGTTG+TGG | - | chr5_3:5749292-5749311 | None:intergenic | 40.0% | |
| GCAATTGTGAAACGAGTGAA+AGG | - | chr5_3:5749387-5749406 | None:intergenic | 40.0% | |
| ! | AGTGAAAAGCGTGGAAACAT+GGG | - | chr5_3:5749621-5749640 | None:intergenic | 40.0% |
| ACTCTTACTGCATAAGCAGA+TGG | + | chr5_3:5749638-5749657 | Msa0793920:CDS | 40.0% | |
| ! | CTAGCATACAAGTTTGCTCG+TGG | + | chr5_3:5748536-5748555 | Msa0793920:CDS | 45.0% |
| ! | AGCTTGAGTATTGTTGGCCA+CGG | - | chr5_3:5748576-5748595 | None:intergenic | 45.0% |
| GATAGCAGCAGCTATTGTTG+AGG | - | chr5_3:5748981-5749000 | None:intergenic | 45.0% | |
| AAAGCAAAACCAAACGCACG+AGG | + | chr5_3:5749228-5749247 | Msa0793920:CDS | 45.0% | |
| AAGCAAAACCAAACGCACGA+GGG | + | chr5_3:5749229-5749248 | Msa0793920:CDS | 45.0% | |
| CCATGGAGTGAAACGAAAAG+AGG | - | chr5_3:5749321-5749340 | None:intergenic | 45.0% | |
| ! | CCTCTTTTCGTTTCACTCCA+TGG | + | chr5_3:5749318-5749337 | Msa0793920:CDS | 45.0% |
| GGAAAATGAGAAAGCCAACG+AGG | - | chr5_3:5749351-5749370 | None:intergenic | 45.0% | |
| GACGACTGTTACGGAAACAT+TGG | + | chr5_3:5749453-5749472 | Msa0793920:CDS | 45.0% | |
| TTGAGGAGAAACGGAAGAGA+GGG | - | chr5_3:5749495-5749514 | None:intergenic | 45.0% | |
| ATTGAGGAGAAACGGAAGAG+AGG | - | chr5_3:5749496-5749515 | None:intergenic | 45.0% | |
| CGCGAGAAATTGAGGAGAAA+CGG | - | chr5_3:5749504-5749523 | None:intergenic | 45.0% | |
| CGTTTCTCCTCAATTTCTCG+CGG | + | chr5_3:5749502-5749521 | Msa0793920:CDS | 45.0% | |
| AACGAAGCATGTCGTTGTTG+CGG | - | chr5_3:5749594-5749613 | None:intergenic | 45.0% | |
| ! | GAGTGAAAAGCGTGGAAACA+TGG | - | chr5_3:5749622-5749641 | None:intergenic | 45.0% |
| TGCAGTAAGAGTGAAAAGCG+TGG | - | chr5_3:5749630-5749649 | None:intergenic | 45.0% | |
| TGGACGGTGATACTGTCAAA+CGG | - | chr5_3:5749748-5749767 | None:intergenic | 45.0% | |
| GACAGTATCACCGTCCAAAT+AGG | + | chr5_3:5749751-5749770 | Msa0793920:CDS | 45.0% | |
| GCTCACGTTTCCTATTTGGA+CGG | - | chr5_3:5749764-5749783 | None:intergenic | 45.0% | |
| AAATAGGAAACGTGAGCCTC+CGG | + | chr5_3:5749767-5749786 | Msa0793920:CDS | 45.0% | |
| ! | CTAGCATACAAGTTTGCTCG+TGG | + | chr5_3:5748536-5748555 | Msa0793920:CDS | 45.0% |
| ! | AGCTTGAGTATTGTTGGCCA+CGG | - | chr5_3:5748576-5748595 | None:intergenic | 45.0% |
| GATAGCAGCAGCTATTGTTG+AGG | - | chr5_3:5748981-5749000 | None:intergenic | 45.0% | |
| AAAGCAAAACCAAACGCACG+AGG | + | chr5_3:5749228-5749247 | Msa0793920:CDS | 45.0% | |
| AAGCAAAACCAAACGCACGA+GGG | + | chr5_3:5749229-5749248 | Msa0793920:CDS | 45.0% | |
| CCATGGAGTGAAACGAAAAG+AGG | - | chr5_3:5749321-5749340 | None:intergenic | 45.0% | |
| ! | CCTCTTTTCGTTTCACTCCA+TGG | + | chr5_3:5749318-5749337 | Msa0793920:CDS | 45.0% |
| GGAAAATGAGAAAGCCAACG+AGG | - | chr5_3:5749351-5749370 | None:intergenic | 45.0% | |
| GACGACTGTTACGGAAACAT+TGG | + | chr5_3:5749453-5749472 | Msa0793920:CDS | 45.0% | |
| TTGAGGAGAAACGGAAGAGA+GGG | - | chr5_3:5749495-5749514 | None:intergenic | 45.0% | |
| ATTGAGGAGAAACGGAAGAG+AGG | - | chr5_3:5749496-5749515 | None:intergenic | 45.0% | |
| CGCGAGAAATTGAGGAGAAA+CGG | - | chr5_3:5749504-5749523 | None:intergenic | 45.0% | |
| CGTTTCTCCTCAATTTCTCG+CGG | + | chr5_3:5749502-5749521 | Msa0793920:CDS | 45.0% | |
| AACGAAGCATGTCGTTGTTG+CGG | - | chr5_3:5749594-5749613 | None:intergenic | 45.0% | |
| ! | GAGTGAAAAGCGTGGAAACA+TGG | - | chr5_3:5749622-5749641 | None:intergenic | 45.0% |
| TGCAGTAAGAGTGAAAAGCG+TGG | - | chr5_3:5749630-5749649 | None:intergenic | 45.0% | |
| TGGACGGTGATACTGTCAAA+CGG | - | chr5_3:5749748-5749767 | None:intergenic | 45.0% | |
| GACAGTATCACCGTCCAAAT+AGG | + | chr5_3:5749751-5749770 | Msa0793920:CDS | 45.0% | |
| GCTCACGTTTCCTATTTGGA+CGG | - | chr5_3:5749764-5749783 | None:intergenic | 45.0% | |
| AAATAGGAAACGTGAGCCTC+CGG | + | chr5_3:5749767-5749786 | Msa0793920:CDS | 45.0% | |
| TGGAGAAACCAATCCATCCG+TGG | + | chr5_3:5748556-5748575 | Msa0793920:CDS | 50.0% | |
| ATTGTTGGCCACGGATGGAT+TGG | - | chr5_3:5748567-5748586 | None:intergenic | 50.0% | |
| ! | TGAGTATTGTTGGCCACGGA+TGG | - | chr5_3:5748572-5748591 | None:intergenic | 50.0% |
| TCCATGGATGCAAACCTCGT+TGG | + | chr5_3:5749334-5749353 | Msa0793920:CDS | 50.0% | |
| AGAAACGGAAGAGAGGGAGT+CGG | - | chr5_3:5749489-5749508 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCGCGAGAAATTG+AGG | - | chr5_3:5749512-5749531 | None:intergenic | 50.0% |
| !! | CAAGAGGTCGGTGTTGGAAT+CGG | - | chr5_3:5749707-5749726 | None:intergenic | 50.0% |
| TACTGTCAAACGGAGGTGAG+CGG | - | chr5_3:5749738-5749757 | None:intergenic | 50.0% | |
| ACGGTGATACTGTCAAACGG+AGG | - | chr5_3:5749745-5749764 | None:intergenic | 50.0% | |
| GGAGGCTCACGTTTCCTATT+TGG | - | chr5_3:5749768-5749787 | None:intergenic | 50.0% | |
| ! | TCAAACGGATTCGAGATCGG+TGG | - | chr5_3:5749803-5749822 | None:intergenic | 50.0% |
| TGGAGAAACCAATCCATCCG+TGG | + | chr5_3:5748556-5748575 | Msa0793920:CDS | 50.0% | |
| ATTGTTGGCCACGGATGGAT+TGG | - | chr5_3:5748567-5748586 | None:intergenic | 50.0% | |
| ! | TGAGTATTGTTGGCCACGGA+TGG | - | chr5_3:5748572-5748591 | None:intergenic | 50.0% |
| TCCATGGATGCAAACCTCGT+TGG | + | chr5_3:5749334-5749353 | Msa0793920:CDS | 50.0% | |
| AGAAACGGAAGAGAGGGAGT+CGG | - | chr5_3:5749489-5749508 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCGCGAGAAATTG+AGG | - | chr5_3:5749512-5749531 | None:intergenic | 50.0% |
| !! | CAAGAGGTCGGTGTTGGAAT+CGG | - | chr5_3:5749707-5749726 | None:intergenic | 50.0% |
| TACTGTCAAACGGAGGTGAG+CGG | - | chr5_3:5749738-5749757 | None:intergenic | 50.0% | |
| ACGGTGATACTGTCAAACGG+AGG | - | chr5_3:5749745-5749764 | None:intergenic | 50.0% | |
| GGAGGCTCACGTTTCCTATT+TGG | - | chr5_3:5749768-5749787 | None:intergenic | 50.0% | |
| ! | TCAAACGGATTCGAGATCGG+TGG | - | chr5_3:5749803-5749822 | None:intergenic | 50.0% |
| CAATGAGTCCCTCGTGCGTT+TGG | - | chr5_3:5749240-5749259 | None:intergenic | 55.0% | |
| GCCAACGAGGTTTGCATCCA+TGG | - | chr5_3:5749338-5749357 | None:intergenic | 55.0% | |
| ! | GTGAAAGGAAGAGAAGCGCG+AGG | - | chr5_3:5749372-5749391 | None:intergenic | 55.0% |
| ACCACCACGGACGACTGTTA+CGG | + | chr5_3:5749444-5749463 | Msa0793920:CDS | 55.0% | |
| GTTTCCGTAACAGTCGTCCG+TGG | - | chr5_3:5749451-5749470 | None:intergenic | 55.0% | |
| ! | TTTTCCACCATCGGACCCAC+CGG | + | chr5_3:5749529-5749548 | Msa0793920:CDS | 55.0% |
| ACAGTCATCGTCGACATCGC+CGG | - | chr5_3:5749551-5749570 | None:intergenic | 55.0% | |
| TGGAATCGGAGAGGACATCG+CGG | - | chr5_3:5749693-5749712 | None:intergenic | 55.0% | |
| CGATTCCAACACCGACCTCT+TGG | + | chr5_3:5749705-5749724 | Msa0793920:CDS | 55.0% | |
| AATGGCCAAGAGGTCGGTGT+TGG | - | chr5_3:5749713-5749732 | None:intergenic | 55.0% | |
| AAACGGAGGTGAGCGGAGAA+TGG | - | chr5_3:5749731-5749750 | None:intergenic | 55.0% | |
| ! | AACGGATTCGAGATCGGTGG+CGG | - | chr5_3:5749800-5749819 | None:intergenic | 55.0% |
| CAATGAGTCCCTCGTGCGTT+TGG | - | chr5_3:5749240-5749259 | None:intergenic | 55.0% | |
| GCCAACGAGGTTTGCATCCA+TGG | - | chr5_3:5749338-5749357 | None:intergenic | 55.0% | |
| ! | GTGAAAGGAAGAGAAGCGCG+AGG | - | chr5_3:5749372-5749391 | None:intergenic | 55.0% |
| ACCACCACGGACGACTGTTA+CGG | + | chr5_3:5749444-5749463 | Msa0793920:CDS | 55.0% | |
| GTTTCCGTAACAGTCGTCCG+TGG | - | chr5_3:5749451-5749470 | None:intergenic | 55.0% | |
| ! | TTTTCCACCATCGGACCCAC+CGG | + | chr5_3:5749529-5749548 | Msa0793920:CDS | 55.0% |
| ACAGTCATCGTCGACATCGC+CGG | - | chr5_3:5749551-5749570 | None:intergenic | 55.0% | |
| TGGAATCGGAGAGGACATCG+CGG | - | chr5_3:5749693-5749712 | None:intergenic | 55.0% | |
| CGATTCCAACACCGACCTCT+TGG | + | chr5_3:5749705-5749724 | Msa0793920:CDS | 55.0% | |
| AATGGCCAAGAGGTCGGTGT+TGG | - | chr5_3:5749713-5749732 | None:intergenic | 55.0% | |
| AAACGGAGGTGAGCGGAGAA+TGG | - | chr5_3:5749731-5749750 | None:intergenic | 55.0% | |
| ! | AACGGATTCGAGATCGGTGG+CGG | - | chr5_3:5749800-5749819 | None:intergenic | 55.0% |
| GGTTGGAACGGCGGTGATGA+AGG | - | chr5_3:5749417-5749436 | None:intergenic | 60.0% | |
| !! | GTGGTGGCGTTGGGTTGGAA+CGG | - | chr5_3:5749429-5749448 | None:intergenic | 60.0% |
| GTAACAGTCGTCCGTGGTGG+TGG | - | chr5_3:5749445-5749464 | None:intergenic | 60.0% | |
| TCCGTAACAGTCGTCCGTGG+TGG | - | chr5_3:5749448-5749467 | None:intergenic | 60.0% | |
| ! | CGCGGCACCTTTTCCACCAT+CGG | + | chr5_3:5749520-5749539 | Msa0793920:CDS | 60.0% |
| !! | GGTGGGTCCGATGGTGGAAA+AGG | - | chr5_3:5749530-5749549 | None:intergenic | 60.0% |
| TCATCGTCGACATCGCCGGT+GGG | - | chr5_3:5749547-5749566 | None:intergenic | 60.0% | |
| !! | GGTCGGTGTTGGAATCGGAG+AGG | - | chr5_3:5749702-5749721 | None:intergenic | 60.0% |
| GCGGAGAATGGCCAAGAGGT+CGG | - | chr5_3:5749719-5749738 | None:intergenic | 60.0% | |
| GTGAGCGGAGAATGGCCAAG+AGG | - | chr5_3:5749723-5749742 | None:intergenic | 60.0% | |
| GGTTGGAACGGCGGTGATGA+AGG | - | chr5_3:5749417-5749436 | None:intergenic | 60.0% | |
| !! | GTGGTGGCGTTGGGTTGGAA+CGG | - | chr5_3:5749429-5749448 | None:intergenic | 60.0% |
| GTAACAGTCGTCCGTGGTGG+TGG | - | chr5_3:5749445-5749464 | None:intergenic | 60.0% | |
| TCCGTAACAGTCGTCCGTGG+TGG | - | chr5_3:5749448-5749467 | None:intergenic | 60.0% | |
| ! | CGCGGCACCTTTTCCACCAT+CGG | + | chr5_3:5749520-5749539 | Msa0793920:CDS | 60.0% |
| !! | GGTGGGTCCGATGGTGGAAA+AGG | - | chr5_3:5749530-5749549 | None:intergenic | 60.0% |
| TCATCGTCGACATCGCCGGT+GGG | - | chr5_3:5749547-5749566 | None:intergenic | 60.0% | |
| !! | GGTCGGTGTTGGAATCGGAG+AGG | - | chr5_3:5749702-5749721 | None:intergenic | 60.0% |
| GCGGAGAATGGCCAAGAGGT+CGG | - | chr5_3:5749719-5749738 | None:intergenic | 60.0% | |
| GTGAGCGGAGAATGGCCAAG+AGG | - | chr5_3:5749723-5749742 | None:intergenic | 60.0% | |
| !! | GTGGCGTTGGGTTGGAACGG+CGG | - | chr5_3:5749426-5749445 | None:intergenic | 65.0% |
| CCAACCCAACGCCACCACCA+CGG | + | chr5_3:5749431-5749450 | Msa0793920:CDS | 65.0% | |
| !! | TCGTCCGTGGTGGTGGCGTT+GGG | - | chr5_3:5749438-5749457 | None:intergenic | 65.0% |
| GTCATCGTCGACATCGCCGG+TGG | - | chr5_3:5749548-5749567 | None:intergenic | 65.0% | |
| GAGAGGACATCGCGGCAGAG+AGG | - | chr5_3:5749685-5749704 | None:intergenic | 65.0% | |
| !! | GTGGCGTTGGGTTGGAACGG+CGG | - | chr5_3:5749426-5749445 | None:intergenic | 65.0% |
| CCAACCCAACGCCACCACCA+CGG | + | chr5_3:5749431-5749450 | Msa0793920:CDS | 65.0% | |
| !! | TCGTCCGTGGTGGTGGCGTT+GGG | - | chr5_3:5749438-5749457 | None:intergenic | 65.0% |
| GTCATCGTCGACATCGCCGG+TGG | - | chr5_3:5749548-5749567 | None:intergenic | 65.0% | |
| GAGAGGACATCGCGGCAGAG+AGG | - | chr5_3:5749685-5749704 | None:intergenic | 65.0% | |
| !! | CCGTGGTGGTGGCGTTGGGT+TGG | - | chr5_3:5749434-5749453 | None:intergenic | 70.0% |
| !! | GTCGTCCGTGGTGGTGGCGT+TGG | - | chr5_3:5749439-5749458 | None:intergenic | 70.0% |
| ATCGCCGGTGGGTCCGATGG+TGG | - | chr5_3:5749536-5749555 | None:intergenic | 70.0% | |
| GACATCGCCGGTGGGTCCGA+TGG | - | chr5_3:5749539-5749558 | None:intergenic | 70.0% | |
| ! | GATCGGTGGCGGTTTCGCGC+CGG | - | chr5_3:5749789-5749808 | None:intergenic | 70.0% |
| !! | CCGTGGTGGTGGCGTTGGGT+TGG | - | chr5_3:5749434-5749453 | None:intergenic | 70.0% |
| !! | GTCGTCCGTGGTGGTGGCGT+TGG | - | chr5_3:5749439-5749458 | None:intergenic | 70.0% |
| ATCGCCGGTGGGTCCGATGG+TGG | - | chr5_3:5749536-5749555 | None:intergenic | 70.0% | |
| GACATCGCCGGTGGGTCCGA+TGG | - | chr5_3:5749539-5749558 | None:intergenic | 70.0% | |
| ! | GATCGGTGGCGGTTTCGCGC+CGG | - | chr5_3:5749789-5749808 | None:intergenic | 70.0% |
| !! | CGGTGGCGGTTTCGCGCCGG+AGG | - | chr5_3:5749786-5749805 | None:intergenic | 80.0% |
| !! | CGGTGGCGGTTTCGCGCCGG+AGG | - | chr5_3:5749786-5749805 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 5748527 | 5749822 | 5748527 | ID=Msa0793920;Name=Msa0793920 |
| chr5_3 | mRNA | 5748527 | 5749822 | 5748527 | ID=Msa0793920-mRNA-1;Parent=Msa0793920;Name=Msa0793920-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|1|0|0|2|0|288 |
| chr5_3 | exon | 5748527 | 5748665 | 5748527 | ID=Msa0793920-mRNA-1:exon:2323;Parent=Msa0793920-mRNA-1 |
| chr5_3 | exon | 5749095 | 5749822 | 5749095 | ID=Msa0793920-mRNA-1:exon:2324;Parent=Msa0793920-mRNA-1 |
| chr5_3 | CDS | 5748527 | 5748665 | 5748527 | ID=Msa0793920-mRNA-1:cds;Parent=Msa0793920-mRNA-1 |
| chr5_3 | CDS | 5749095 | 5749822 | 5749095 | ID=Msa0793920-mRNA-1:cds;Parent=Msa0793920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
