Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178800 | sp|Q5BK48|TTC5_RAT | 35.461 | 423 | 240 | 12 | 10 | 405 | 5 | 421 | 3.79e-64 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178800 | G7IAV1 | 96.454 | 423 | 12 | 1 | 1 | 423 | 1 | 420 | 0.0 | 841 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa0178800 | 0.805610 | 1.228245e-49 | -8.615850e-47 |
| Msa0007440 | Msa0178800 | 0.837910 | 3.931826e-57 | -8.615850e-47 |
| Msa0010490 | Msa0178800 | 0.825324 | 4.987164e-54 | -8.615850e-47 |
| Msa0010500 | Msa0178800 | 0.820972 | 5.169997e-53 | -8.615850e-47 |
| Msa0011960 | Msa0178800 | 0.816700 | 4.830592e-52 | -8.615850e-47 |
| Msa0015480 | Msa0178800 | 0.802831 | 4.655177e-49 | -8.615850e-47 |
| Msa0029260 | Msa0178800 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
| Msa0032580 | Msa0178800 | 0.802092 | 6.609686e-49 | -8.615850e-47 |
| Msa0033110 | Msa0178800 | 0.818668 | 1.737935e-52 | -8.615850e-47 |
| Msa0033260 | Msa0178800 | 0.809375 | 1.952094e-50 | -8.615850e-47 |
| Msa0037540 | Msa0178800 | -0.844060 | 9.548761e-59 | -8.615850e-47 |
| Msa0037590 | Msa0178800 | -0.840761 | 7.158621e-58 | -8.615850e-47 |
| Msa0043660 | Msa0178800 | 0.805194 | 1.501945e-49 | -8.615850e-47 |
| Msa0044330 | Msa0178800 | 0.836133 | 1.118466e-56 | -8.615850e-47 |
| Msa0054750 | Msa0178800 | 0.823647 | 1.237580e-53 | -8.615850e-47 |
| Msa0056030 | Msa0178800 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0059950 | Msa0178800 | 0.801691 | 7.991421e-49 | -8.615850e-47 |
| Msa0079180 | Msa0178800 | 0.826901 | 2.102829e-54 | -8.615850e-47 |
| Msa0089820 | Msa0178800 | 0.877852 | 4.504436e-69 | -8.615850e-47 |
| Msa0090550 | Msa0178800 | 0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0091410 | Msa0178800 | 0.810492 | 1.122098e-50 | -8.615850e-47 |
| Msa0096030 | Msa0178800 | 0.821611 | 3.683558e-53 | -8.615850e-47 |
| Msa0100090 | Msa0178800 | 0.803524 | 3.345056e-49 | -8.615850e-47 |
| Msa0104240 | Msa0178800 | 0.815089 | 1.105406e-51 | -8.615850e-47 |
| Msa0109590 | Msa0178800 | 0.824476 | 7.907691e-54 | -8.615850e-47 |
| Msa0115190 | Msa0178800 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0118540 | Msa0178800 | 0.805546 | 1.266958e-49 | -8.615850e-47 |
| Msa0127020 | Msa0178800 | 0.821232 | 4.503391e-53 | -8.615850e-47 |
| Msa0127780 | Msa0178800 | 0.844470 | 7.411844e-59 | -8.615850e-47 |
| Msa0129190 | Msa0178800 | -0.835298 | 1.820069e-56 | -8.615850e-47 |
| Msa0138020 | Msa0178800 | 0.821923 | 3.118959e-53 | -8.615850e-47 |
| Msa0140500 | Msa0178800 | -0.819860 | 9.303872e-53 | -8.615850e-47 |
| Msa0148080 | Msa0178800 | 0.812830 | 3.480627e-51 | -8.615850e-47 |
| Msa0159340 | Msa0178800 | 0.807673 | 4.505347e-50 | -8.615850e-47 |
| Msa0167980 | Msa0178800 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa0169280 | Msa0178800 | 0.817620 | 2.999920e-52 | -8.615850e-47 |
| Msa0178800 | Msa0189300 | 0.813328 | 2.705585e-51 | -8.615850e-47 |
| Msa0178800 | Msa0217290 | 0.809124 | 2.209125e-50 | -8.615850e-47 |
| Msa0178800 | Msa0217680 | 0.818239 | 2.174524e-52 | -8.615850e-47 |
| Msa0178800 | Msa0217700 | 0.823380 | 1.428775e-53 | -8.615850e-47 |
| Msa0178800 | Msa0229380 | 0.809745 | 1.625303e-50 | -8.615850e-47 |
| Msa0178800 | Msa0231660 | 0.820935 | 5.271706e-53 | -8.615850e-47 |
| Msa0178800 | Msa0241140 | 0.833024 | 6.763303e-56 | -8.615850e-47 |
| Msa0178800 | Msa0241390 | 0.812587 | 3.933898e-51 | -8.615850e-47 |
| Msa0178800 | Msa0256330 | 0.810120 | 1.349877e-50 | -8.615850e-47 |
| Msa0178800 | Msa0257500 | 0.854130 | 1.511012e-61 | -8.615850e-47 |
| Msa0178800 | Msa0257520 | 0.844503 | 7.262140e-59 | -8.615850e-47 |
| Msa0178800 | Msa0260680 | 0.807398 | 5.155334e-50 | -8.615850e-47 |
| Msa0178800 | Msa0270500 | 0.804424 | 2.174354e-49 | -8.615850e-47 |
| Msa0178800 | Msa0272450 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0178800 | Msa0278580 | 0.804742 | 1.867080e-49 | -8.615850e-47 |
| Msa0178800 | Msa0279220 | 0.813763 | 2.171078e-51 | -8.615850e-47 |
| Msa0178800 | Msa0279240 | 0.850966 | 1.206048e-60 | -8.615850e-47 |
| Msa0178800 | Msa0295330 | 0.817701 | 2.876488e-52 | -8.615850e-47 |
| Msa0178800 | Msa0296480 | 0.816252 | 6.087523e-52 | -8.615850e-47 |
| Msa0178800 | Msa0296820 | 0.825250 | 5.192100e-54 | -8.615850e-47 |
| Msa0178800 | Msa0297810 | -0.823139 | 1.626295e-53 | -8.615850e-47 |
| Msa0178800 | Msa0305410 | 0.803379 | 3.586154e-49 | -8.615850e-47 |
| Msa0178800 | Msa0317970 | 0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0178800 | Msa0318980 | 0.840096 | 1.068214e-57 | -8.615850e-47 |
| Msa0178800 | Msa0321690 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0178800 | Msa0335820 | -0.820263 | 7.523398e-53 | -8.615850e-47 |
| Msa0178800 | Msa0345350 | 0.803453 | 3.461646e-49 | -8.615850e-47 |
| Msa0178800 | Msa0357790 | 0.805549 | 1.265348e-49 | -8.615850e-47 |
| Msa0178800 | Msa0357830 | 0.805174 | 1.516022e-49 | -8.615850e-47 |
| Msa0178800 | Msa0357840 | 0.801084 | 1.063957e-48 | -8.615850e-47 |
| Msa0178800 | Msa0358860 | 0.835690 | 1.448910e-56 | -8.615850e-47 |
| Msa0178800 | Msa0380100 | 0.833587 | 4.896264e-56 | -8.615850e-47 |
| Msa0178800 | Msa0381610 | -0.800227 | 1.590708e-48 | -8.615850e-47 |
| Msa0178800 | Msa0383800 | 0.843276 | 1.548021e-58 | -8.615850e-47 |
| Msa0178800 | Msa0385490 | 0.868840 | 4.840406e-66 | -8.615850e-47 |
| Msa0178800 | Msa0388280 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
| Msa0178800 | Msa0389610 | -0.825267 | 5.146013e-54 | -8.615850e-47 |
| Msa0178800 | Msa0397540 | 0.819371 | 1.203198e-52 | -8.615850e-47 |
| Msa0178800 | Msa0412840 | 0.832895 | 7.279455e-56 | -8.615850e-47 |
| Msa0178800 | Msa0434180 | 0.837396 | 5.329629e-57 | -8.615850e-47 |
| Msa0178800 | Msa0457510 | 0.838812 | 2.301956e-57 | -8.615850e-47 |
| Msa0178800 | Msa0460110 | 0.801034 | 1.089437e-48 | -8.615850e-47 |
| Msa0178800 | Msa0468320 | 0.802614 | 5.160120e-49 | -8.615850e-47 |
| Msa0178800 | Msa0481030 | 0.831413 | 1.693196e-55 | -8.615850e-47 |
| Msa0178800 | Msa0481280 | 0.808255 | 3.387855e-50 | -8.615850e-47 |
| Msa0178800 | Msa0500470 | 0.814366 | 1.598037e-51 | -8.615850e-47 |
| Msa0178800 | Msa0510930 | 0.817211 | 3.709501e-52 | -8.615850e-47 |
| Msa0178800 | Msa0518170 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0178800 | Msa0521740 | 0.812673 | 3.765686e-51 | -8.615850e-47 |
| Msa0178800 | Msa0530100 | 0.828813 | 7.295439e-55 | -8.615850e-47 |
| Msa0178800 | Msa0542090 | 0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa0178800 | Msa0542130 | 0.805268 | 1.449126e-49 | -8.615850e-47 |
| Msa0178800 | Msa0572840 | 0.812998 | 3.196903e-51 | -8.615850e-47 |
| Msa0178800 | Msa0581280 | 0.812639 | 3.830860e-51 | -8.615850e-47 |
| Msa0178800 | Msa0589390 | 0.800414 | 1.457619e-48 | -8.615850e-47 |
| Msa0178800 | Msa0596800 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
| Msa0178800 | Msa0602370 | 0.825697 | 4.068720e-54 | -8.615850e-47 |
| Msa0178800 | Msa0610130 | 0.849655 | 2.812022e-60 | -8.615850e-47 |
| Msa0178800 | Msa0610180 | 0.845182 | 4.762986e-59 | -8.615850e-47 |
| Msa0178800 | Msa0617640 | 0.806028 | 1.003509e-49 | -8.615850e-47 |
| Msa0178800 | Msa0620620 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0178800 | Msa0629650 | 0.813180 | 2.916733e-51 | -8.615850e-47 |
| Msa0178800 | Msa0643320 | 0.836771 | 7.698936e-57 | -8.615850e-47 |
| Msa0178800 | Msa0661210 | 0.817459 | 3.261278e-52 | -8.615850e-47 |
| Msa0178800 | Msa0682090 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa0178800 | Msa0682140 | 0.816473 | 5.430572e-52 | -8.615850e-47 |
| Msa0178800 | Msa0683140 | 0.847298 | 1.263114e-59 | -8.615850e-47 |
| Msa0178800 | Msa0683600 | 0.849151 | 3.886666e-60 | -8.615850e-47 |
| Msa0178800 | Msa0688390 | 0.813680 | 2.264629e-51 | -8.615850e-47 |
| Msa0178800 | Msa0689780 | 0.800210 | 1.603763e-48 | -8.615850e-47 |
| Msa0178800 | Msa0703910 | 0.860252 | 2.350794e-63 | -8.615850e-47 |
| Msa0178800 | Msa0705820 | 0.804358 | 2.244183e-49 | -8.615850e-47 |
| Msa0178800 | Msa0706400 | 0.802231 | 6.187467e-49 | -8.615850e-47 |
| Msa0178800 | Msa0707250 | 0.832012 | 1.204944e-55 | -8.615850e-47 |
| Msa0178800 | Msa0711150 | 0.830776 | 2.427121e-55 | -8.615850e-47 |
| Msa0178800 | Msa0715410 | 0.815860 | 7.446073e-52 | -8.615850e-47 |
| Msa0178800 | Msa0741440 | 0.832026 | 1.195233e-55 | -8.615850e-47 |
| Msa0178800 | Msa0749440 | 0.824054 | 9.936215e-54 | -8.615850e-47 |
| Msa0178800 | Msa0750850 | 0.825333 | 4.962267e-54 | -8.615850e-47 |
| Msa0178800 | Msa0751850 | 0.827449 | 1.554661e-54 | -8.615850e-47 |
| Msa0178800 | Msa0783960 | 0.827959 | 1.172525e-54 | -8.615850e-47 |
| Msa0178800 | Msa0797970 | 0.813419 | 2.584290e-51 | -8.615850e-47 |
| Msa0178800 | Msa0817460 | 0.803779 | 2.961639e-49 | -8.615850e-47 |
| Msa0178800 | Msa0822310 | -0.812102 | 5.020402e-51 | -8.615850e-47 |
| Msa0178800 | Msa0822500 | 0.828109 | 1.078983e-54 | -8.615850e-47 |
| Msa0178800 | Msa0826760 | 0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0178800 | Msa0830230 | 0.820841 | 5.541967e-53 | -8.615850e-47 |
| Msa0178800 | Msa0831850 | 0.833381 | 5.509145e-56 | -8.615850e-47 |
| Msa0178800 | Msa0832150 | 0.800480 | 1.413099e-48 | -8.615850e-47 |
| Msa0178800 | Msa0833460 | 0.810760 | 9.818560e-51 | -8.615850e-47 |
| Msa0178800 | Msa0844110 | 0.811061 | 8.450390e-51 | -8.615850e-47 |
| Msa0178800 | Msa0861470 | 0.823418 | 1.400211e-53 | -8.615850e-47 |
| Msa0178800 | Msa0861570 | 0.830808 | 2.383375e-55 | -8.615850e-47 |
| Msa0178800 | Msa0865030 | 0.801942 | 7.097626e-49 | -8.615850e-47 |
| Msa0178800 | Msa0876360 | 0.814178 | 1.758748e-51 | -8.615850e-47 |
| Msa0178800 | Msa0876810 | 0.805164 | 1.523528e-49 | -8.615850e-47 |
| Msa0178800 | Msa0886840 | 0.809560 | 1.781387e-50 | -8.615850e-47 |
| Msa0178800 | Msa0887250 | 0.819552 | 1.093642e-52 | -8.615850e-47 |
| Msa0178800 | Msa0888260 | 0.805787 | 1.127604e-49 | -8.615850e-47 |
| Msa0178800 | Msa0890550 | 0.806095 | 9.716112e-50 | -8.615850e-47 |
| Msa0178800 | Msa0894710 | 0.802795 | 4.734595e-49 | -8.615850e-47 |
| Msa0178800 | Msa0901320 | 0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0178800 | Msa0902830 | 0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0178800 | Msa0909110 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa0178800 | Msa0937330 | 0.806551 | 7.787210e-50 | -8.615850e-47 |
| Msa0178800 | Msa0969370 | 0.832739 | 7.959603e-56 | -8.615850e-47 |
| Msa0178800 | Msa0974630 | 0.813439 | 2.558551e-51 | -8.615850e-47 |
| Msa0178800 | Msa0980020 | 0.816469 | 5.441160e-52 | -8.615850e-47 |
| Msa0178800 | Msa0987370 | 0.800872 | 1.175289e-48 | -8.615850e-47 |
| Msa0178800 | Msa0994370 | 0.812645 | 3.819938e-51 | -8.615850e-47 |
| Msa0178800 | Msa0994390 | 0.809518 | 1.818377e-50 | -8.615850e-47 |
| Msa0178800 | Msa1012830 | 0.800817 | 1.206455e-48 | -8.615850e-47 |
| Msa0178800 | Msa1014730 | 0.820631 | 6.194899e-53 | -8.615850e-47 |
| Msa0178800 | Msa1025080 | 0.822014 | 2.971591e-53 | -8.615850e-47 |
| Msa0178800 | Msa1026940 | 0.800478 | 1.414355e-48 | -8.615850e-47 |
| Msa0178800 | Msa1029050 | 0.831666 | 1.466742e-55 | -8.615850e-47 |
| Msa0178800 | Msa1037420 | 0.808869 | 2.505893e-50 | -8.615850e-47 |
| Msa0178800 | Msa1063690 | 0.807532 | 4.828519e-50 | -8.615850e-47 |
| Msa0178800 | Msa1064250 | 0.856256 | 3.638855e-62 | -8.615850e-47 |
| Msa0178800 | Msa1071320 | 0.833533 | 5.051071e-56 | -8.615850e-47 |
| Msa0178800 | Msa1076960 | 0.803430 | 3.499214e-49 | -8.615850e-47 |
| Msa0178800 | Msa1077030 | 0.802064 | 6.698091e-49 | -8.615850e-47 |
| Msa0178800 | Msa1080800 | 0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa0178800 | Msa1081790 | -0.820676 | 6.048085e-53 | -8.615850e-47 |
| Msa0178800 | Msa1089320 | 0.824066 | 9.868815e-54 | -8.615850e-47 |
| Msa0178800 | Msa1089460 | 0.801522 | 8.653295e-49 | -8.615850e-47 |
| Msa0178800 | Msa1093260 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa0178800 | Msa1109090 | 0.821762 | 3.398770e-53 | -8.615850e-47 |
| Msa0178800 | Msa1111870 | 0.850487 | 1.644923e-60 | -8.615850e-47 |
| Msa0178800 | Msa1133230 | 0.846166 | 2.575916e-59 | -8.615850e-47 |
| Msa0178800 | Msa1133250 | 0.839080 | 1.961803e-57 | -8.615850e-47 |
| Msa0178800 | Msa1152920 | 0.824084 | 9.776383e-54 | -8.615850e-47 |
| Msa0178800 | Msa1163540 | 0.809530 | 1.808098e-50 | -8.615850e-47 |
| Msa0178800 | Msa1166090 | -0.818602 | 1.799609e-52 | -8.615850e-47 |
| Msa0178800 | Msa1176710 | 0.843355 | 1.474490e-58 | -8.615850e-47 |
| Msa0178800 | Msa1176720 | 0.847619 | 1.031332e-59 | -8.615850e-47 |
| Msa0178800 | Msa1180500 | 0.843248 | 1.574720e-58 | -8.615850e-47 |
| Msa0178800 | Msa1181250 | 0.850663 | 1.467529e-60 | -8.615850e-47 |
| Msa0178800 | Msa1181330 | 0.852953 | 3.290043e-61 | -8.615850e-47 |
| Msa0178800 | Msa1200250 | 0.807557 | 4.769801e-50 | -8.615850e-47 |
| Msa0178800 | Msa1206310 | 0.804774 | 1.838288e-49 | -8.615850e-47 |
| Msa0178800 | Msa1206360 | 0.822868 | 1.881948e-53 | -8.615850e-47 |
| Msa0178800 | Msa1206670 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0178800 | Msa1206850 | 0.823758 | 1.165787e-53 | -8.615850e-47 |
| Msa0178800 | Msa1207310 | 0.818194 | 2.226510e-52 | -8.615850e-47 |
| Msa0178800 | Msa1209200 | 0.804601 | 1.997946e-49 | -8.615850e-47 |
| Msa0178800 | Msa1210020 | 0.807879 | 4.073752e-50 | -8.615850e-47 |
| Msa0178800 | Msa1231840 | 0.880868 | 3.849759e-70 | -8.615850e-47 |
| Msa0178800 | Msa1237630 | 0.814840 | 1.255279e-51 | -8.615850e-47 |
| Msa0178800 | Msa1270660 | 0.811479 | 6.857508e-51 | -8.615850e-47 |
| Msa0178800 | Msa1274560 | 0.825171 | 5.421288e-54 | -8.615850e-47 |
| Msa0178800 | Msa1287460 | 0.803840 | 2.877084e-49 | -8.615850e-47 |
| Msa0178800 | Msa1302850 | 0.801405 | 9.143475e-49 | -8.615850e-47 |
| Msa0178800 | Msa1305810 | 0.819498 | 1.125134e-52 | -8.615850e-47 |
| Msa0178800 | Msa1306560 | 0.825953 | 3.538127e-54 | -8.615850e-47 |
| Msa0178800 | Msa1307180 | 0.837545 | 4.879292e-57 | -8.615850e-47 |
| Msa0178800 | Msa1310440 | 0.800517 | 1.388680e-48 | -8.615850e-47 |
| Msa0178800 | Msa1312520 | 0.848205 | 7.108171e-60 | -8.615850e-47 |
| Msa0178800 | Msa1316360 | 0.848684 | 5.239872e-60 | -8.615850e-47 |
| Msa0178800 | Msa1316640 | 0.810467 | 1.136112e-50 | -8.615850e-47 |
| Msa0178800 | Msa1332040 | -0.809061 | 2.278875e-50 | -8.615850e-47 |
| Msa0178800 | Msa1346840 | 0.828907 | 6.926178e-55 | -8.615850e-47 |
| Msa0178800 | Msa1348560 | 0.808243 | 3.408434e-50 | -8.615850e-47 |
| Msa0178800 | Msa1351540 | 0.811269 | 7.616590e-51 | -8.615850e-47 |
| Msa0178800 | Msa1355890 | 0.865898 | 4.227957e-65 | -8.615850e-47 |
| Msa0178800 | Msa1358670 | 0.801347 | 9.399952e-49 | -8.615850e-47 |
| Msa0178800 | Msa1359630 | 0.824296 | 8.718152e-54 | -8.615850e-47 |
| Msa0178800 | Msa1364210 | 0.822180 | 2.719353e-53 | -8.615850e-47 |
| Msa0178800 | Msa1371940 | 0.823524 | 1.322682e-53 | -8.615850e-47 |
| Msa0178800 | Msa1375380 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0178800 | Msa1382790 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0178800 | Msa1384870 | 0.808363 | 3.214006e-50 | -8.615850e-47 |
| Msa0178800 | Msa1388860 | 0.824201 | 9.175315e-54 | -8.615850e-47 |
| Msa0178800 | Msa1393570 | 0.828040 | 1.121232e-54 | -8.615850e-47 |
| Msa0178800 | Msa1394380 | 0.806195 | 9.255210e-50 | -8.615850e-47 |
| Msa0178800 | Msa1396400 | -0.818502 | 1.895573e-52 | -8.615850e-47 |
| Msa0178800 | Msa1403340 | 0.838283 | 3.152473e-57 | -8.615850e-47 |
| Msa0178800 | Msa1407190 | 0.800153 | 1.647341e-48 | -8.615850e-47 |
| Msa0178800 | Msa1412130 | 0.808814 | 2.573929e-50 | -8.615850e-47 |
| Msa0178800 | Msa1437270 | 0.807594 | 4.683578e-50 | -8.615850e-47 |
| Msa0178800 | Msa1445390 | -0.814784 | 1.291348e-51 | -8.615850e-47 |
| Msa0178800 | Msa1448560 | 0.803201 | 3.903012e-49 | -8.615850e-47 |
| Msa0178800 | Msa1449340 | -0.836322 | 1.001416e-56 | -8.615850e-47 |
| Msa0178800 | Msa1457160 | 0.808772 | 2.627865e-50 | -8.615850e-47 |
| Msa0178800 | Msa1463900 | 0.816958 | 4.227875e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178800 | MtrunA17_Chr1g0208631 | 96.454 | 423 | 12 | 1 | 1 | 423 | 1 | 420 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGTTCTTTCAATTTA+TGG | 0.041976 | 1_4:+66227064 | Msa0178800:CDS |
| TATGAGCAAGTGCTTGTTAA+TGG | 0.171126 | 1_4:+66228163 | Msa0178800:CDS |
| AGAATCTTGAATTGAGTTTC+TGG | 0.180520 | 1_4:+66221793 | Msa0178800:five_prime_UTR |
| AGAAGAAGAAGAAGCGTTAT+TGG | 0.225139 | 1_4:+66221880 | Msa0178800:CDS |
| TATGTTTAGGAAACTGTATT+TGG | 0.250546 | 1_4:+66222182 | Msa0178800:CDS |
| CTATACATGTATTAACTAAA+TGG | 0.262364 | 1_4:-66228290 | None:intergenic |
| TCAGCTTCTTTCTTATATTC+AGG | 0.281112 | 1_4:-66222106 | None:intergenic |
| CCTCAATCTTGCATTGAATA+AGG | 0.287268 | 1_4:+66222237 | Msa0178800:CDS |
| ATCGGAGTGTTGTTGCAATT+TGG | 0.294706 | 1_4:-66221981 | None:intergenic |
| TTGAAAGAACAAAGCAAGTT+TGG | 0.297122 | 1_4:-66227057 | None:intergenic |
| GTCAATGTCATCCAGATTAA+AGG | 0.298729 | 1_4:+66227886 | Msa0178800:intron |
| TGACAAAGAATCTTCTTGTT+AGG | 0.306855 | 1_4:-66223289 | None:intergenic |
| GTGAATTTATTGTCCAAGTC+TGG | 0.309921 | 1_4:+66228315 | Msa0178800:three_prime_UTR |
| GCAGATGCTTGGTTATGTTT+AGG | 0.314045 | 1_4:+66222169 | Msa0178800:CDS |
| CGCCTCTTTGGCAGCATCAT+TGG | 0.317195 | 1_4:+66225998 | Msa0178800:CDS |
| AATTTGGAGGTTCTGTCGTC+AGG | 0.349437 | 1_4:-66221965 | None:intergenic |
| GGAAGGTGTTATTCTTAATC+AGG | 0.352024 | 1_4:+66226191 | Msa0178800:CDS |
| ATCCAAAGCAATTGCTTCCT+TGG | 0.352141 | 1_4:-66224607 | None:intergenic |
| AATATCTAGAGAACTATGAT+AGG | 0.352347 | 1_4:+66225614 | Msa0178800:CDS |
| ATTTAGCAGTGGTCTGTTCA+TGG | 0.356390 | 1_4:-66228241 | None:intergenic |
| ATCTTCTTGACAGATAATCT+TGG | 0.367469 | 1_4:+66225068 | Msa0178800:intron |
| AGCTAAGCGAATCGCCTCTT+TGG | 0.372288 | 1_4:+66225986 | Msa0178800:CDS |
| ATGCCTAAAGCAAAACTTGA+TGG | 0.390052 | 1_4:-66228403 | None:intergenic |
| ACCCTCTGACAGAAGGTCTA+TGG | 0.391113 | 1_4:-66226143 | None:intergenic |
| AGGAGTGAGATGGAGAATTC+AGG | 0.412289 | 1_4:+66221845 | Msa0178800:exon |
| TGCCAAGGAAGCAATTGCTT+TGG | 0.414023 | 1_4:+66224605 | Msa0178800:CDS |
| GAATCTTGAATTGAGTTTCT+GGG | 0.419034 | 1_4:+66221794 | Msa0178800:five_prime_UTR |
| TTCAATTTATGGTGTACGTC+AGG | 0.425085 | 1_4:+66227075 | Msa0178800:CDS |
| GGAGTGTAAAGTTTCACATT+TGG | 0.427323 | 1_4:+66228367 | Msa0178800:three_prime_UTR |
| TTAAACCTCCATTCCATTCG+AGG | 0.447738 | 1_4:+66221825 | Msa0178800:five_prime_UTR |
| CCAGTTCAAATCTATACGCC+TGG | 0.459498 | 1_4:+66228135 | Msa0178800:CDS |
| TTTAGTTAATACATGTATAG+AGG | 0.459577 | 1_4:+66228293 | Msa0178800:three_prime_UTR |
| AACTATGATAGGGCCCTTAG+TGG | 0.461017 | 1_4:+66225625 | Msa0178800:CDS |
| CTGCGGTTGTTACCCAGACT+TGG | 0.461229 | 1_4:-66228328 | None:intergenic |
| ATCCATCTCTTGCAGATGCT+TGG | 0.463826 | 1_4:+66222158 | Msa0178800:CDS |
| TAGGGCCCTTAGTGGATTTG+AGG | 0.467829 | 1_4:+66225633 | Msa0178800:CDS |
| TCCTCTGCAGCGTTGAGACC+TGG | 0.471479 | 1_4:-66225673 | None:intergenic |
| TTCGTGACGTTGATGTGTCC+TGG | 0.478330 | 1_4:+66227941 | Msa0178800:CDS |
| ATTTGAGGCTGCTGCTTCAA+AGG | 0.480860 | 1_4:+66225648 | Msa0178800:CDS |
| GCACTATTAAAGTAAAAGTC+AGG | 0.491009 | 1_4:-66225332 | None:intergenic |
| GGAGTGTTGTTGCAATTTGG+AGG | 0.491155 | 1_4:-66221978 | None:intergenic |
| ATTAAAGTAAAAGTCAGGAT+TGG | 0.509600 | 1_4:-66225327 | None:intergenic |
| GCTGCTGCTTCAAAGGATCC+AGG | 0.513394 | 1_4:+66225655 | Msa0178800:CDS |
| ATCTCACTCCTCGAATGGAA+TGG | 0.513502 | 1_4:-66221833 | None:intergenic |
| ATGTACCAGGAGAAAGATGA+AGG | 0.513743 | 1_4:+66225296 | Msa0178800:intron |
| CAGCAGCCTCAAATCCACTA+AGG | 0.514190 | 1_4:-66225639 | None:intergenic |
| CCAGGCGTATAGATTTGAAC+TGG | 0.515665 | 1_4:-66228135 | None:intergenic |
| ATTTGGAGGTTCTGTCGTCA+GGG | 0.526347 | 1_4:-66221964 | None:intergenic |
| TCTCCATCTCACTCCTCGAA+TGG | 0.528834 | 1_4:-66221838 | None:intergenic |
| CCTTATTCAATGCAAGATTG+AGG | 0.532131 | 1_4:-66222237 | None:intergenic |
| GCAGTATTTGAACATCTTCG+AGG | 0.534719 | 1_4:+66222064 | Msa0178800:CDS |
| AGCAATTGCTTTGGATGTCA+AGG | 0.535720 | 1_4:+66224614 | Msa0178800:CDS |
| GCACTTGCTCATAGAAATCC+AGG | 0.536136 | 1_4:-66228153 | None:intergenic |
| TGATGTGTCCTGGAAAGAAA+AGG | 0.536857 | 1_4:+66227951 | Msa0178800:CDS |
| ATTGCTTTGGATGTCAAGGA+TGG | 0.539541 | 1_4:+66224618 | Msa0178800:CDS |
| TGAATTTATTGTCCAAGTCT+GGG | 0.543788 | 1_4:+66228316 | Msa0178800:three_prime_UTR |
| ATAGAGCTCTAGCAGTAGAC+GGG | 0.546155 | 1_4:+66226170 | Msa0178800:CDS |
| TCTATGGTAACTGTTCTGTA+TGG | 0.559486 | 1_4:-66226127 | None:intergenic |
| AATAGAGCTCTAGCAGTAGA+CGG | 0.559874 | 1_4:+66226169 | Msa0178800:CDS |
| ATTCCATTCGAGGAGTGAGA+TGG | 0.563361 | 1_4:+66221835 | Msa0178800:exon |
| GAGAAGAGTGAGAATGAGAT+CGG | 0.563502 | 1_4:-66221999 | None:intergenic |
| TGTCAATTTACTTGACAATG+TGG | 0.565680 | 1_4:+66225708 | Msa0178800:CDS |
| TTATGGTGTACGTCAGGATG+TGG | 0.566091 | 1_4:+66227081 | Msa0178800:CDS |
| AACCAAGCATCTGCAAGAGA+TGG | 0.566217 | 1_4:-66222160 | None:intergenic |
| GTTATTCTTAATCAGGAGTG+AGG | 0.569424 | 1_4:+66226198 | Msa0178800:CDS |
| AGGTCTCAACGCTGCAGAGG+AGG | 0.569792 | 1_4:+66225675 | Msa0178800:CDS |
| ACATCTTCGAGGAAAAGTGT+TGG | 0.571025 | 1_4:+66222075 | Msa0178800:CDS |
| TCAAATACTGCTCGTTGCGT+AGG | 0.576970 | 1_4:-66222052 | None:intergenic |
| AGCCAATGATGCTGCCAAAG+AGG | 0.579234 | 1_4:-66226000 | None:intergenic |
| AGCTCTAGCAGTAGACGGGA+AGG | 0.584112 | 1_4:+66226174 | Msa0178800:CDS |
| ACATCAACGTCACGAAAACA+AGG | 0.587953 | 1_4:-66227934 | None:intergenic |
| TTGCTTTGGATGTCAAGGAT+GGG | 0.590474 | 1_4:+66224619 | Msa0178800:CDS |
| ATATCTAGAGAACTATGATA+GGG | 0.601068 | 1_4:+66225615 | Msa0178800:CDS |
| ATGTCAAGGATGGGAACTCT+TGG | 0.601935 | 1_4:+66224628 | Msa0178800:CDS |
| CAATGTGGACAATCTGTTGA+GGG | 0.603379 | 1_4:+66225723 | Msa0178800:CDS |
| AGCAGCCTCAAATCCACTAA+GGG | 0.606061 | 1_4:-66225638 | None:intergenic |
| TACCATAGACCTTCTGTCAG+AGG | 0.606220 | 1_4:+66226141 | Msa0178800:CDS |
| TGAAAGCATTCAACATGCCA+AGG | 0.607329 | 1_4:+66224590 | Msa0178800:CDS |
| TATTAAGACCCTCTGACAGA+AGG | 0.607470 | 1_4:-66226150 | None:intergenic |
| ACCATAGACCTTCTGTCAGA+GGG | 0.609970 | 1_4:+66226142 | Msa0178800:CDS |
| AGATGGATGAAAAGCAAGCT+CGG | 0.610640 | 1_4:+66221761 | Msa0178800:five_prime_UTR |
| TCCAGGTCTCAACGCTGCAG+AGG | 0.614379 | 1_4:+66225672 | Msa0178800:CDS |
| TTATTCTTAATCAGGAGTGA+GGG | 0.616578 | 1_4:+66226199 | Msa0178800:CDS |
| TCACTCCTCGAATGGAATGG+AGG | 0.624288 | 1_4:-66221830 | None:intergenic |
| GAGATGGAGAATTCAGGCAG+CGG | 0.643588 | 1_4:+66221851 | Msa0178800:exon |
| AAGAAGGTAAAGTTCGTCAG+TGG | 0.644341 | 1_4:-66221918 | None:intergenic |
| AATGTCATCCAGATTAAAGG+AGG | 0.656874 | 1_4:+66227889 | Msa0178800:intron |
| TATAGACACTGTATGCGACA+TGG | 0.659044 | 1_4:+66228454 | Msa0178800:three_prime_UTR |
| GCAACTCATCTATTTAGCAG+TGG | 0.660935 | 1_4:-66228252 | None:intergenic |
| TGTACCAGGAGAAAGATGAA+GGG | 0.665997 | 1_4:+66225297 | Msa0178800:intron |
| ACAATGTGGACAATCTGTTG+AGG | 0.676219 | 1_4:+66225722 | Msa0178800:CDS |
| GATGTACGAATAGCTTGCTG+AGG | 0.687153 | 1_4:-66228199 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAAATGTAAATTTTAAA+AGG | - | chr1_4:66224785-66224804 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTTAATAAATAAC+CGG | + | chr1_4:66225007-66225026 | Msa0178800:intron | 10.0% |
| !!! | TTTCTTTTAAAAGAAAAAAT+TGG | - | chr1_4:66225892-66225911 | None:intergenic | 10.0% |
| !!! | ATTTTTTCTTTTAAAAGAAA+TGG | + | chr1_4:66225892-66225911 | Msa0178800:intron | 10.0% |
| !!! | AAATCAAGAATAATTTTTTA+AGG | - | chr1_4:66226794-66226813 | None:intergenic | 10.0% |
| !! | TACTTATTGTAAAAAAATAA+TGG | + | chr1_4:66227241-66227260 | Msa0178800:intron | 10.0% |
| !!! | TATTTTCTAAAATAAAAGTT+TGG | + | chr1_4:66227789-66227808 | Msa0178800:intron | 10.0% |
| !!! | ATTTTCTAAAATAAAAGTTT+GGG | + | chr1_4:66227790-66227809 | Msa0178800:intron | 10.0% |
| !! | GAAATAGAAATAATAGAATT+TGG | - | chr1_4:66222419-66222438 | None:intergenic | 15.0% |
| !!! | TAGAATCTATGAATTTTTTA+TGG | + | chr1_4:66222745-66222764 | Msa0178800:intron | 15.0% |
| !! | AATATGAATATTGAAAATCT+AGG | + | chr1_4:66223157-66223176 | Msa0178800:intron | 15.0% |
| !! | AAAAAAAATAAAGGTTAAAG+CGG | - | chr1_4:66223357-66223376 | None:intergenic | 15.0% |
| !! | GTAGATCTTAAAAAAAATAA+AGG | - | chr1_4:66223366-66223385 | None:intergenic | 15.0% |
| !!! | TTAGCATACATTTTATATAA+AGG | + | chr1_4:66225437-66225456 | Msa0178800:intron | 15.0% |
| !! | TATTCCTTTATATAAAACAT+GGG | - | chr1_4:66225507-66225526 | None:intergenic | 15.0% |
| !! | TTATTCCTTTATATAAAACA+TGG | - | chr1_4:66225508-66225527 | None:intergenic | 15.0% |
| !!! | TTATACATTTTATTATGTAC+AGG | + | chr1_4:66225953-66225972 | Msa0178800:intron | 15.0% |
| !!! | TTTTGAATTTAACAAATACA+GGG | + | chr1_4:66226596-66226615 | Msa0178800:intron | 15.0% |
| !!! | AATTATTCTTTTGTTATTGT+TGG | - | chr1_4:66226653-66226672 | None:intergenic | 15.0% |
| !! | ATTTAAATTAATCATCAAAC+AGG | - | chr1_4:66226676-66226695 | None:intergenic | 15.0% |
| !!! | ACAAATGAAAGTTATTATTT+TGG | - | chr1_4:66226855-66226874 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAATAAAAGTTTG+GGG | + | chr1_4:66227791-66227810 | Msa0178800:intron | 15.0% |
| !! | TTCAAAAAAAAAACCTAAGA+TGG | + | chr1_4:66221744-66221763 | Msa0178800:five_prime_UTR | 20.0% |
| !! | ATAGAAATAATAGAATTTGG+AGG | - | chr1_4:66222416-66222435 | None:intergenic | 20.0% |
| !!! | ATTAAGGATTAAACTTGTTT+TGG | - | chr1_4:66222512-66222531 | None:intergenic | 20.0% |
| !! | TTAATCTTAGTAAAGCTTAT+GGG | + | chr1_4:66222527-66222546 | Msa0178800:intron | 20.0% |
| !! | TTATGTAAGATTAAGGATTA+GGG | - | chr1_4:66222707-66222726 | None:intergenic | 20.0% |
| !!! | GCCATTTTTTTTTTAAAACT+CGG | + | chr1_4:66222908-66222927 | Msa0178800:intron | 20.0% |
| !!! | ACCGAGTTTTAAAAAAAAAA+TGG | - | chr1_4:66222912-66222931 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAAACTCGGTATT+TGG | + | chr1_4:66222915-66222934 | Msa0178800:intron | 20.0% |
| !! | TTAGGAATATTTATACTAAC+CGG | + | chr1_4:66223457-66223476 | Msa0178800:intron | 20.0% |
| !! | CTTTCTACAATTATAAATTC+TGG | - | chr1_4:66223562-66223581 | None:intergenic | 20.0% |
| !! | AGATTGATTAATTGTTGAAA+AGG | + | chr1_4:66223663-66223682 | Msa0178800:intron | 20.0% |
| !! | ATTAAATAAGGATATGTTAG+TGG | - | chr1_4:66223866-66223885 | None:intergenic | 20.0% |
| !! | GAAAGGAAATTCATTAAATA+AGG | - | chr1_4:66223878-66223897 | None:intergenic | 20.0% |
| !! | TTCCATCAACTATAATTATT+AGG | + | chr1_4:66223907-66223926 | Msa0178800:intron | 20.0% |
| !! | TCCATCAACTATAATTATTA+GGG | + | chr1_4:66223908-66223927 | Msa0178800:intron | 20.0% |
| !! | TTATGTTGTAATTGAATACA+AGG | - | chr1_4:66224080-66224099 | None:intergenic | 20.0% |
| !! | CTATTAATAAGGTTTATGTA+AGG | - | chr1_4:66224140-66224159 | None:intergenic | 20.0% |
| !!! | AGTCAACTTTTATTATAGTA+AGG | - | chr1_4:66224204-66224223 | None:intergenic | 20.0% |
| !! | TTACTATAATAAAAGTTGAC+TGG | + | chr1_4:66224203-66224222 | Msa0178800:intron | 20.0% |
| !! | TTAGTAAAGCTATACTAAAT+AGG | - | chr1_4:66224462-66224481 | None:intergenic | 20.0% |
| !! | TAAATCTAATAGTAGTGAAT+AGG | + | chr1_4:66225227-66225246 | Msa0178800:intron | 20.0% |
| !! | AGGCTTATTATTTAAAAATG+TGG | + | chr1_4:66225247-66225266 | Msa0178800:intron | 20.0% |
| !! | ACATAATGAAGTAGAATAAA+AGG | - | chr1_4:66225378-66225397 | None:intergenic | 20.0% |
| !! | AAGGAATAATATTGAATCTT+TGG | + | chr1_4:66225456-66225475 | Msa0178800:intron | 20.0% |
| !! | AATTGAAAAAGACATAGTAT+AGG | - | chr1_4:66226442-66226461 | None:intergenic | 20.0% |
| !!! | CTTTTGAATTTAACAAATAC+AGG | + | chr1_4:66226595-66226614 | Msa0178800:intron | 20.0% |
| !! | ATATGCAAGCATATATTTAT+TGG | + | chr1_4:66226702-66226721 | Msa0178800:intron | 20.0% |
| !! | TAAGGAACATAATTATACAA+AGG | - | chr1_4:66226776-66226795 | None:intergenic | 20.0% |
| !!! | GGTATGTATAATTTTTGAAA+AGG | - | chr1_4:66226820-66226839 | None:intergenic | 20.0% |
| !! | AAAATATCAATCATGTATGT+TGG | + | chr1_4:66226883-66226902 | Msa0178800:intron | 20.0% |
| !! | TCTCAAGAAATTAACATAAA+GGG | - | chr1_4:66226945-66226964 | None:intergenic | 20.0% |
| !! | TTCTCAAGAAATTAACATAA+AGG | - | chr1_4:66226946-66226965 | None:intergenic | 20.0% |
| !! | TGTAAAAAAATAATGGTAGT+AGG | + | chr1_4:66227248-66227267 | Msa0178800:intron | 20.0% |
| !! | TTGAAAAGCTATAAAATAAG+TGG | - | chr1_4:66227636-66227655 | None:intergenic | 20.0% |
| !! | AAATAAATATTCAACATGCT+TGG | - | chr1_4:66227774-66227793 | None:intergenic | 20.0% |
| !! | TGATAACTATAACAGTAATA+AGG | - | chr1_4:66227834-66227853 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTTATTACAACA+GGG | - | chr1_4:66228060-66228079 | None:intergenic | 20.0% |
| !!! | ATGATTTGTTTTATTACAAC+AGG | - | chr1_4:66228061-66228080 | None:intergenic | 20.0% |
| !! | AACAAATCATATTCTGATTA+AGG | + | chr1_4:66228071-66228090 | Msa0178800:intron | 20.0% |
| !!! | TTTTTAAATGTACATGAATG+AGG | - | chr1_4:66228107-66228126 | None:intergenic | 20.0% |
| !! | CTATACATGTATTAACTAAA+TGG | - | chr1_4:66228293-66228312 | None:intergenic | 20.0% |
| !! | TTTAGTTAATACATGTATAG+AGG | + | chr1_4:66228293-66228312 | Msa0178800:three_prime_UTR | 20.0% |
| ! | TATGTTTAGGAAACTGTATT+TGG | + | chr1_4:66222182-66222201 | Msa0178800:CDS | 25.0% |
| ! | TTGTAATAGTGTGCTTATTT+AGG | + | chr1_4:66222343-66222362 | Msa0178800:intron | 25.0% |
| ! | TTATGATTGAAGAAACATGA+TGG | + | chr1_4:66222375-66222394 | Msa0178800:intron | 25.0% |
| ! | CATAAGCTTTACTAAGATTA+AGG | - | chr1_4:66222528-66222547 | None:intergenic | 25.0% |
| ! | CTTAATCTTAGTAAAGCTTA+TGG | + | chr1_4:66222526-66222545 | Msa0178800:intron | 25.0% |
| ! | TATTCTTTGTTACGTAAACA+TGG | - | chr1_4:66222654-66222673 | None:intergenic | 25.0% |
| ! | CTTATGTAAGATTAAGGATT+AGG | - | chr1_4:66222708-66222727 | None:intergenic | 25.0% |
| ! | TAAATGGTATTAACCCATTT+GGG | - | chr1_4:66223108-66223127 | None:intergenic | 25.0% |
| ! | ATAAATGGTATTAACCCATT+TGG | - | chr1_4:66223109-66223128 | None:intergenic | 25.0% |
| ! | GTTACAGAAGTTACTTATAT+AGG | + | chr1_4:66223693-66223712 | Msa0178800:intron | 25.0% |
| ! | ACCCTAATAATTATAGTTGA+TGG | - | chr1_4:66223912-66223931 | None:intergenic | 25.0% |
| !!! | ATTAGTTGTGTTGATTTCAA+TGG | - | chr1_4:66223961-66223980 | None:intergenic | 25.0% |
| !!! | AAGTGACATTTATTTTGAGA+AGG | + | chr1_4:66224010-66224029 | Msa0178800:intron | 25.0% |
| ! | TGTAATTGAATACAAGGAAT+AGG | - | chr1_4:66224074-66224093 | None:intergenic | 25.0% |
| ! | TTACAACATAATTCTAGACT+AGG | + | chr1_4:66224089-66224108 | Msa0178800:intron | 25.0% |
| ! | ATAAAAGAGATAAAGAAACC+TGG | + | chr1_4:66224234-66224253 | Msa0178800:intron | 25.0% |
| ! | CAACACATAAAAGAATAGTA+GGG | - | chr1_4:66224498-66224517 | None:intergenic | 25.0% |
| ! | ACAACACATAAAAGAATAGT+AGG | - | chr1_4:66224499-66224518 | None:intergenic | 25.0% |
| ! | TGATGATTGAAATTGAATCT+AGG | + | chr1_4:66224851-66224870 | Msa0178800:intron | 25.0% |
| !!! | AAATAACCGGCAATATTTTT+TGG | + | chr1_4:66225020-66225039 | Msa0178800:intron | 25.0% |
| !!! | TTTTAAAGAATGTGAAAGTC+TGG | - | chr1_4:66225141-66225160 | None:intergenic | 25.0% |
| ! | ATTAAAGTAAAAGTCAGGAT+TGG | - | chr1_4:66225330-66225349 | None:intergenic | 25.0% |
| !!! | CTGTCTAAATAATTTGTTAC+AGG | + | chr1_4:66225585-66225604 | Msa0178800:intron | 25.0% |
| ! | AATATCTAGAGAACTATGAT+AGG | + | chr1_4:66225614-66225633 | Msa0178800:CDS | 25.0% |
| ! | ATATCTAGAGAACTATGATA+GGG | + | chr1_4:66225615-66225634 | Msa0178800:CDS | 25.0% |
| !! | TTTTCAATAACTTGATATCC+TGG | + | chr1_4:66225826-66225845 | Msa0178800:intron | 25.0% |
| ! | AATAGCGAAAAATATGTTTC+TGG | - | chr1_4:66226251-66226270 | None:intergenic | 25.0% |
| ! | AAATAAGGTTGAAAAGGATA+AGG | - | chr1_4:66226520-66226539 | None:intergenic | 25.0% |
| !! | CAAGCATATATTTATTGGTT+AGG | + | chr1_4:66226707-66226726 | Msa0178800:intron | 25.0% |
| ! | ATATCTAATGCAACAAAGAA+AGG | + | chr1_4:66226732-66226751 | Msa0178800:intron | 25.0% |
| ! | GAACATAATTATACAAAGGA+GGG | - | chr1_4:66226772-66226791 | None:intergenic | 25.0% |
| ! | AAGAAATTAACATAAAGGGA+AGG | - | chr1_4:66226941-66226960 | None:intergenic | 25.0% |
| !! | TGCTTTGTTCTTTCAATTTA+TGG | + | chr1_4:66227064-66227083 | Msa0178800:CDS | 25.0% |
| ! | AAGAGTAAAATTCACTATCT+TGG | + | chr1_4:66227170-66227189 | Msa0178800:intron | 25.0% |
| ! | ACTATCTTGGATAAATTTCT+AGG | + | chr1_4:66227183-66227202 | Msa0178800:intron | 25.0% |
| ! | CTATCTTGGATAAATTTCTA+GGG | + | chr1_4:66227184-66227203 | Msa0178800:intron | 25.0% |
| ! | TTTGTCTACTATAACTTGAT+GGG | - | chr1_4:66227489-66227508 | None:intergenic | 25.0% |
| ! | ATTTGTCTACTATAACTTGA+TGG | - | chr1_4:66227490-66227509 | None:intergenic | 25.0% |
| !!! | GTTCATTTTTCTCTCTTTAT+TGG | + | chr1_4:66227519-66227538 | Msa0178800:intron | 25.0% |
| !! | TATAGCTTTTCAAATTAGCT+TGG | + | chr1_4:66227643-66227662 | Msa0178800:intron | 25.0% |
| !!! | ATCCTTATTTTCTCTTTGAT+TGG | + | chr1_4:66227676-66227695 | Msa0178800:intron | 25.0% |
| ! | TTCCAATCAAAGAGAAAATA+AGG | - | chr1_4:66227681-66227700 | None:intergenic | 25.0% |
| ! | TATAACAGTAATAAGGAAAG+GGG | - | chr1_4:66227827-66227846 | None:intergenic | 25.0% |
| ! | CTATAACAGTAATAAGGAAA+GGG | - | chr1_4:66227828-66227847 | None:intergenic | 25.0% |
| ! | ACTATAACAGTAATAAGGAA+AGG | - | chr1_4:66227829-66227848 | None:intergenic | 25.0% |
| ! | GTTATCAATTGAAGAATCAA+TGG | + | chr1_4:66227847-66227866 | Msa0178800:intron | 25.0% |
| !!! | AAGTTTCACATTTGGTTTTA+TGG | + | chr1_4:66228375-66228394 | Msa0178800:three_prime_UTR | 25.0% |
| AGAATCTTGAATTGAGTTTC+TGG | + | chr1_4:66221793-66221812 | Msa0178800:five_prime_UTR | 30.0% | |
| GAATCTTGAATTGAGTTTCT+GGG | + | chr1_4:66221794-66221813 | Msa0178800:five_prime_UTR | 30.0% | |
| TCAGCTTCTTTCTTATATTC+AGG | - | chr1_4:66222109-66222128 | None:intergenic | 30.0% | |
| GGAAACTGTATTTGGAAAAA+AGG | + | chr1_4:66222190-66222209 | Msa0178800:CDS | 30.0% | |
| GCATTATTGTAATACGTATG+AGG | + | chr1_4:66222282-66222301 | Msa0178800:intron | 30.0% | |
| ATGAATATGATCTTAACTCC+AGG | + | chr1_4:66222449-66222468 | Msa0178800:intron | 30.0% | |
| TGGCTTAAACTAATAGCATT+TGG | + | chr1_4:66222585-66222604 | Msa0178800:intron | 30.0% | |
| ATCCTTAATCTTACATAAGC+TGG | + | chr1_4:66222709-66222728 | Msa0178800:intron | 30.0% | |
| AACCAGCTTATGTAAGATTA+AGG | - | chr1_4:66222714-66222733 | None:intergenic | 30.0% | |
| ATGTTACGTAATTTCTGTCA+TGG | + | chr1_4:66222768-66222787 | Msa0178800:intron | 30.0% | |
| !! | TAGTGTTGACAACAATAGTT+TGG | + | chr1_4:66222851-66222870 | Msa0178800:intron | 30.0% |
| !! | ATAGCATACTGGCTTAAAAT+GGG | - | chr1_4:66222989-66223008 | None:intergenic | 30.0% |
| !!! | TAGGAAATTACTTTTTCCTC+CGG | + | chr1_4:66223176-66223195 | Msa0178800:intron | 30.0% |
| CAATATCTATCATCACTTGT+AGG | - | chr1_4:66223253-66223272 | None:intergenic | 30.0% | |
| CTACAAGTGATGATAGATAT+TGG | + | chr1_4:66223251-66223270 | Msa0178800:intron | 30.0% | |
| ! | TAGATATTGGTTGTTTATGC+AGG | + | chr1_4:66223264-66223283 | Msa0178800:intron | 30.0% |
| ! | AGATATTGGTTGTTTATGCA+GGG | + | chr1_4:66223265-66223284 | Msa0178800:intron | 30.0% |
| TGACAAAGAATCTTCTTGTT+AGG | - | chr1_4:66223292-66223311 | None:intergenic | 30.0% | |
| ! | AAGAAGTATGTCTCAAAGTA+AGG | + | chr1_4:66223327-66223346 | Msa0178800:intron | 30.0% |
| !! | GTTTTTCAGTTGTCCTAATA+TGG | + | chr1_4:66223387-66223406 | Msa0178800:intron | 30.0% |
| ATATAACCAAATCATCTGAC+CGG | - | chr1_4:66223479-66223498 | None:intergenic | 30.0% | |
| TGTTATGATTGTGTTAGAAC+TGG | + | chr1_4:66223611-66223630 | Msa0178800:intron | 30.0% | |
| TGATGGAATAGTTAAGTGAA+AGG | - | chr1_4:66223895-66223914 | None:intergenic | 30.0% | |
| !!! | TGACATTTATTTTGAGAAGG+AGG | + | chr1_4:66224013-66224032 | Msa0178800:intron | 30.0% |
| !!! | GACATTTATTTTGAGAAGGA+GGG | + | chr1_4:66224014-66224033 | Msa0178800:intron | 30.0% |
| ATAGGAGAAGATGATTAGAA+GGG | - | chr1_4:66224056-66224075 | None:intergenic | 30.0% | |
| AATAGGAGAAGATGATTAGA+AGG | - | chr1_4:66224057-66224076 | None:intergenic | 30.0% | |
| AACATAATTCTAGACTAGGT+TGG | + | chr1_4:66224093-66224112 | Msa0178800:intron | 30.0% | |
| TATGCGGAAAAATGAAAAAC+TGG | + | chr1_4:66224344-66224363 | Msa0178800:intron | 30.0% | |
| ATGCGGAAAAATGAAAAACT+GGG | + | chr1_4:66224345-66224364 | Msa0178800:intron | 30.0% | |
| AATTGGTGCATGTAAGAAAA+TGG | + | chr1_4:66224394-66224413 | Msa0178800:intron | 30.0% | |
| TGTAAGAAAATGGAGTTGAA+TGG | + | chr1_4:66224404-66224423 | Msa0178800:intron | 30.0% | |
| GTAAGAAAATGGAGTTGAAT+GGG | + | chr1_4:66224405-66224424 | Msa0178800:intron | 30.0% | |
| TAAGAAAATGGAGTTGAATG+GGG | + | chr1_4:66224406-66224425 | Msa0178800:intron | 30.0% | |
| TAAAAGAATAGTAGGGTCAT+AGG | - | chr1_4:66224491-66224510 | None:intergenic | 30.0% | |
| TTCAATCATCAGTACATTTC+AGG | - | chr1_4:66224842-66224861 | None:intergenic | 30.0% | |
| !! | GACAAGCATTAAAAGCATTA+AGG | - | chr1_4:66224918-66224937 | None:intergenic | 30.0% |
| AGATCTAGCACAATACTAAA+AGG | - | chr1_4:66224991-66225010 | None:intergenic | 30.0% | |
| TGAAAGCCAAAAAATATTGC+CGG | - | chr1_4:66225029-66225048 | None:intergenic | 30.0% | |
| AGAAGATCAAATAGTCAGAT+GGG | - | chr1_4:66225055-66225074 | None:intergenic | 30.0% | |
| AAGAAGATCAAATAGTCAGA+TGG | - | chr1_4:66225056-66225075 | None:intergenic | 30.0% | |
| ATCTTCTTGACAGATAATCT+TGG | + | chr1_4:66225068-66225087 | Msa0178800:intron | 30.0% | |
| AAAATGCTGTAAGTATGAAG+AGG | + | chr1_4:66225168-66225187 | Msa0178800:intron | 30.0% | |
| TATTGACCAAACATTTGGTT+AGG | - | chr1_4:66225277-66225296 | None:intergenic | 30.0% | |
| GTACATATTGACCAAACATT+TGG | - | chr1_4:66225282-66225301 | None:intergenic | 30.0% | |
| GCACTATTAAAGTAAAAGTC+AGG | - | chr1_4:66225335-66225354 | None:intergenic | 30.0% | |
| CCTTTATATAAAACATGGGA+AGG | - | chr1_4:66225503-66225522 | None:intergenic | 30.0% | |
| ! | CCTTCCCATGTTTTATATAA+AGG | + | chr1_4:66225500-66225519 | Msa0178800:intron | 30.0% |
| ATAGTGCACATATTGTGTAT+TGG | + | chr1_4:66225546-66225565 | Msa0178800:intron | 30.0% | |
| TGTCAATTTACTTGACAATG+TGG | + | chr1_4:66225708-66225727 | Msa0178800:CDS | 30.0% | |
| !!! | TAGTCATCACCTTATTTTGA+GGG | + | chr1_4:66225919-66225938 | Msa0178800:intron | 30.0% |
| TTATTCTTAATCAGGAGTGA+GGG | + | chr1_4:66226199-66226218 | Msa0178800:CDS | 30.0% | |
| ATTTCAAAACTCCAGAAAGA+GGG | - | chr1_4:66226319-66226338 | None:intergenic | 30.0% | |
| !!! | CCATTACTTTTAAAACTGGT+TGG | - | chr1_4:66226354-66226373 | None:intergenic | 30.0% |
| !!! | CCAACCAGTTTTAAAAGTAA+TGG | + | chr1_4:66226351-66226370 | Msa0178800:intron | 30.0% |
| !!! | CACTCCATTACTTTTAAAAC+TGG | - | chr1_4:66226358-66226377 | None:intergenic | 30.0% |
| CTGGAAAAATAAGGTTGAAA+AGG | - | chr1_4:66226526-66226545 | None:intergenic | 30.0% | |
| !!! | TTTCAACCTTATTTTTCCAG+TGG | + | chr1_4:66226526-66226545 | Msa0178800:intron | 30.0% |
| !!! | TTCAACCTTATTTTTCCAGT+GGG | + | chr1_4:66226527-66226546 | Msa0178800:intron | 30.0% |
| AAATACCCACTGGAAAAATA+AGG | - | chr1_4:66226535-66226554 | None:intergenic | 30.0% | |
| !! | TTATTTTTCCAGTGGGTATT+TGG | + | chr1_4:66226534-66226553 | Msa0178800:intron | 30.0% |
| AATTATACAAAGGAGGGAAA+AGG | - | chr1_4:66226766-66226785 | None:intergenic | 30.0% | |
| GGAACATAATTATACAAAGG+AGG | - | chr1_4:66226773-66226792 | None:intergenic | 30.0% | |
| !!! | TTATTTTGGAACAATCAGTC+AGG | - | chr1_4:66226841-66226860 | None:intergenic | 30.0% |
| ATCAATCATGTATGTTGGTA+TGG | + | chr1_4:66226888-66226907 | Msa0178800:intron | 30.0% | |
| TCAATCATGTATGTTGGTAT+GGG | + | chr1_4:66226889-66226908 | Msa0178800:intron | 30.0% | |
| TTGAAAGAACAAAGCAAGTT+TGG | - | chr1_4:66227060-66227079 | None:intergenic | 30.0% | |
| ! | ACTCTTTGAAAAACGTTACT+GGG | - | chr1_4:66227156-66227175 | None:intergenic | 30.0% |
| ! | TACTCTTTGAAAAACGTTAC+TGG | - | chr1_4:66227157-66227176 | None:intergenic | 30.0% |
| TGTCAAAGTAGACATTAACA+AGG | + | chr1_4:66227382-66227401 | Msa0178800:intron | 30.0% | |
| CTATCATTACATATTTGGTC+TGG | - | chr1_4:66227415-66227434 | None:intergenic | 30.0% | |
| CTTCAGAATTGCGAAATATA+GGG | + | chr1_4:66227442-66227461 | Msa0178800:intron | 30.0% | |
| TTGTCTACTATAACTTGATG+GGG | - | chr1_4:66227488-66227507 | None:intergenic | 30.0% | |
| !! | ATATAATAGAAGCACTTGCT+TGG | + | chr1_4:66227567-66227586 | Msa0178800:intron | 30.0% |
| ATAACAGTAATAAGGAAAGG+GGG | - | chr1_4:66227826-66227845 | None:intergenic | 30.0% | |
| TGAATTTATTGTCCAAGTCT+GGG | + | chr1_4:66228316-66228335 | Msa0178800:three_prime_UTR | 30.0% | |
| ! | CAGTTTCTTTTTCTATTCTG+CGG | - | chr1_4:66228348-66228367 | None:intergenic | 30.0% |
| ! | TTACCATCAAGTTTTGCTTT+AGG | + | chr1_4:66228400-66228419 | Msa0178800:three_prime_UTR | 30.0% |
| !! | AGAAGAAGAAGAAGCGTTAT+TGG | + | chr1_4:66221880-66221899 | Msa0178800:CDS | 35.0% |
| GGAAAAATGTATCACGAAGA+AGG | - | chr1_4:66221937-66221956 | None:intergenic | 35.0% | |
| !! | TTTTCTTTCTTCTGGAGGAA+CGG | - | chr1_4:66222029-66222048 | None:intergenic | 35.0% |
| ! | GTAGGTGATTTTCTTTCTTC+TGG | - | chr1_4:66222037-66222056 | None:intergenic | 35.0% |
| CCTTATTCAATGCAAGATTG+AGG | - | chr1_4:66222240-66222259 | None:intergenic | 35.0% | |
| CCTCAATCTTGCATTGAATA+AGG | + | chr1_4:66222237-66222256 | Msa0178800:CDS | 35.0% | |
| ! | TGTGCTTATTTAGGCTTTTG+AGG | + | chr1_4:66222352-66222371 | Msa0178800:intron | 35.0% |
| ATCTTAACTCCAGGAACATT+TGG | + | chr1_4:66222458-66222477 | Msa0178800:intron | 35.0% | |
| ACTCTAATACCAAATGTTCC+TGG | - | chr1_4:66222470-66222489 | None:intergenic | 35.0% | |
| TCTTAGTAAAGCTTATGGGA+CGG | + | chr1_4:66222531-66222550 | Msa0178800:intron | 35.0% | |
| !! | GACAACAATAGTTTGGTTCT+TGG | + | chr1_4:66222858-66222877 | Msa0178800:intron | 35.0% |
| !!! | TAGTTTGGTTCTTGGTTTTG+TGG | + | chr1_4:66222866-66222885 | Msa0178800:intron | 35.0% |
| !! | TAGCATACTGGCTTAAAATG+GGG | - | chr1_4:66222988-66223007 | None:intergenic | 35.0% |
| !! | CATAGCATACTGGCTTAAAA+TGG | - | chr1_4:66222990-66223009 | None:intergenic | 35.0% |
| TTAAGCCAGTATGCTATGTA+TGG | + | chr1_4:66222992-66223011 | Msa0178800:intron | 35.0% | |
| ATCAAACCTAAGACCTTGAT+AGG | + | chr1_4:66223043-66223062 | Msa0178800:intron | 35.0% | |
| ATAAAGTGAAACCAAGACTC+CGG | - | chr1_4:66223205-66223224 | None:intergenic | 35.0% | |
| GTCTTGGTTTCACTTTATTC+TGG | + | chr1_4:66223207-66223226 | Msa0178800:intron | 35.0% | |
| TTTCAGTTGTCCTAATATGG+CGG | + | chr1_4:66223390-66223409 | Msa0178800:intron | 35.0% | |
| AAATCAGATTCCGCCATATT+AGG | - | chr1_4:66223403-66223422 | None:intergenic | 35.0% | |
| TTCCTAAGATCAGTGAAGAA+AGG | - | chr1_4:66223444-66223463 | None:intergenic | 35.0% | |
| ! | AGTGAGATTTTCTCTAGCTA+CGG | - | chr1_4:66223533-66223552 | None:intergenic | 35.0% |
| ATTAATTGTTGAAAAGGCCC+AGG | + | chr1_4:66223669-66223688 | Msa0178800:intron | 35.0% | |
| AAGTAACTTCTGTAACTCCT+GGG | - | chr1_4:66223689-66223708 | None:intergenic | 35.0% | |
| TAAGTAACTTCTGTAACTCC+TGG | - | chr1_4:66223690-66223709 | None:intergenic | 35.0% | |
| CAGAAGTTACTTATATAGGC+AGG | + | chr1_4:66223697-66223716 | Msa0178800:intron | 35.0% | |
| TACTTATATAGGCAGGAGTT+AGG | + | chr1_4:66223704-66223723 | Msa0178800:intron | 35.0% | |
| ACGTGACAGTTATAATGAGA+CGG | - | chr1_4:66223775-66223794 | None:intergenic | 35.0% | |
| !!! | TGTCACTTTTGTATTGTGCA+CGG | - | chr1_4:66223998-66224017 | None:intergenic | 35.0% |
| TAGGAGAAGATGATTAGAAG+GGG | - | chr1_4:66224055-66224074 | None:intergenic | 35.0% | |
| GGGTAGGCATTCTATTAATA+AGG | - | chr1_4:66224151-66224170 | None:intergenic | 35.0% | |
| AAAGAGATAAAGAAACCTGG+TGG | + | chr1_4:66224237-66224256 | Msa0178800:intron | 35.0% | |
| GTGTGCATGATCAAATTCTA+GGG | - | chr1_4:66224321-66224340 | None:intergenic | 35.0% | |
| TGTGTGCATGATCAAATTCT+AGG | - | chr1_4:66224322-66224341 | None:intergenic | 35.0% | |
| GGAAAAATGAAAAACTGGGA+AGG | + | chr1_4:66224349-66224368 | Msa0178800:intron | 35.0% | |
| AGAAACAACTGAGTTGCATA+AGG | - | chr1_4:66224817-66224836 | None:intergenic | 35.0% | |
| ! | GGAAACCAGTTATTCTTTTC+TGG | + | chr1_4:66224872-66224891 | Msa0178800:intron | 35.0% |
| ATTAAGGTAGCAAGTCTCTT+GGG | - | chr1_4:66224902-66224921 | None:intergenic | 35.0% | |
| TCAGTCACAAACAATGTACA+AGG | - | chr1_4:66224940-66224959 | None:intergenic | 35.0% | |
| !!! | CTGACAAGTTTTTTTGTCAC+TGG | + | chr1_4:66225101-66225120 | Msa0178800:CDS | 35.0% |
| !!! | ACAAGTTTTTTTGTCACTGG+AGG | + | chr1_4:66225104-66225123 | Msa0178800:CDS | 35.0% |
| !!! | TTTTTTTGTCACTGGAGGTT+GGG | + | chr1_4:66225109-66225128 | Msa0178800:CDS | 35.0% |
| ATGTTTGGTCAATATGTACC+AGG | + | chr1_4:66225283-66225302 | Msa0178800:intron | 35.0% | |
| GGATCAAATGCAACTTACAA+TGG | - | chr1_4:66225357-66225376 | None:intergenic | 35.0% | |
| AATAACTTGATATCCTGGCT+TGG | + | chr1_4:66225831-66225850 | Msa0178800:intron | 35.0% | |
| ATAACTTGATATCCTGGCTT+GGG | + | chr1_4:66225832-66225851 | Msa0178800:intron | 35.0% | |
| !!! | GTAGTCATCACCTTATTTTG+AGG | + | chr1_4:66225918-66225937 | Msa0178800:intron | 35.0% |
| AAATGTACTACAGATGATGC+TGG | - | chr1_4:66226048-66226067 | None:intergenic | 35.0% | |
| GATTCATCATGTCTACATTC+TGG | + | chr1_4:66226090-66226109 | Msa0178800:intron | 35.0% | |
| TCTATGGTAACTGTTCTGTA+TGG | - | chr1_4:66226130-66226149 | None:intergenic | 35.0% | |
| !! | GGAAGGTGTTATTCTTAATC+AGG | + | chr1_4:66226191-66226210 | Msa0178800:CDS | 35.0% |
| GTTATTCTTAATCAGGAGTG+AGG | + | chr1_4:66226198-66226217 | Msa0178800:CDS | 35.0% | |
| GGTTACAAATGCAAGGAAAT+TGG | - | chr1_4:66226298-66226317 | None:intergenic | 35.0% | |
| CATTTCAAAACTCCAGAAAG+AGG | - | chr1_4:66226320-66226339 | None:intergenic | 35.0% | |
| ! | AATGGAGTGACTTGATTTTG+TGG | + | chr1_4:66226369-66226388 | Msa0178800:intron | 35.0% |
| ! | GGGAGGTTTTTAAATGCATT+CGG | - | chr1_4:66226410-66226429 | None:intergenic | 35.0% |
| ACATAGTATAGGCGTATTCA+CGG | - | chr1_4:66226431-66226450 | None:intergenic | 35.0% | |
| TGAAAAAAGTGGTTGGGAAA+AGG | + | chr1_4:66226569-66226588 | Msa0178800:intron | 35.0% | |
| GAAAAAAGTGGTTGGGAAAA+GGG | + | chr1_4:66226570-66226589 | Msa0178800:intron | 35.0% | |
| AAAAAAGTGGTTGGGAAAAG+GGG | + | chr1_4:66226571-66226590 | Msa0178800:intron | 35.0% | |
| CAATCATGTATGTTGGTATG+GGG | + | chr1_4:66226890-66226909 | Msa0178800:intron | 35.0% | |
| AATCATGTATGTTGGTATGG+GGG | + | chr1_4:66226891-66226910 | Msa0178800:intron | 35.0% | |
| TTCAATTTATGGTGTACGTC+AGG | + | chr1_4:66227075-66227094 | Msa0178800:CDS | 35.0% | |
| ACTTCTAAGCACATGATCTT+TGG | + | chr1_4:66227311-66227330 | Msa0178800:intron | 35.0% | |
| ! | CATGATCTTTGGTGCAATTA+AGG | + | chr1_4:66227322-66227341 | Msa0178800:intron | 35.0% |
| ! | TACCACAGCACATGATTTTA+TGG | - | chr1_4:66227353-66227372 | None:intergenic | 35.0% |
| GCGCACTATCATTACATATT+TGG | - | chr1_4:66227420-66227439 | None:intergenic | 35.0% | |
| GCTTCAGAATTGCGAAATAT+AGG | + | chr1_4:66227441-66227460 | Msa0178800:intron | 35.0% | |
| AGAATTGCGAAATATAGGGT+TGG | + | chr1_4:66227446-66227465 | Msa0178800:intron | 35.0% | |
| AATCTGGATGACATTGACAA+GGG | - | chr1_4:66227884-66227903 | None:intergenic | 35.0% | |
| TAATCTGGATGACATTGACA+AGG | - | chr1_4:66227885-66227904 | None:intergenic | 35.0% | |
| GTCAATGTCATCCAGATTAA+AGG | + | chr1_4:66227886-66227905 | Msa0178800:intron | 35.0% | |
| AATGTCATCCAGATTAAAGG+AGG | + | chr1_4:66227889-66227908 | Msa0178800:intron | 35.0% | |
| ! | AAAGTGTACCTTTTCTTTCC+AGG | - | chr1_4:66227962-66227981 | None:intergenic | 35.0% |
| ! | TATGAGCAAGTGCTTGTTAA+TGG | + | chr1_4:66228163-66228182 | Msa0178800:CDS | 35.0% |
| GTGAATTTATTGTCCAAGTC+TGG | + | chr1_4:66228315-66228334 | Msa0178800:three_prime_UTR | 35.0% | |
| CGCAGAATAGAAAAAGAAAC+TGG | + | chr1_4:66228346-66228365 | Msa0178800:three_prime_UTR | 35.0% | |
| GGAGTGTAAAGTTTCACATT+TGG | + | chr1_4:66228367-66228386 | Msa0178800:three_prime_UTR | 35.0% | |
| ATGCCTAAAGCAAAACTTGA+TGG | - | chr1_4:66228406-66228425 | None:intergenic | 35.0% | |
| !! | GCTTGCTTTTCATCCATCTT+AGG | - | chr1_4:66221760-66221779 | None:intergenic | 40.0% |
| AGATGGATGAAAAGCAAGCT+CGG | + | chr1_4:66221761-66221780 | Msa0178800:five_prime_UTR | 40.0% | |
| TTAAACCTCCATTCCATTCG+AGG | + | chr1_4:66221825-66221844 | Msa0178800:five_prime_UTR | 40.0% | |
| AAGAAGGTAAAGTTCGTCAG+TGG | - | chr1_4:66221921-66221940 | None:intergenic | 40.0% | |
| !! | ATCGGAGTGTTGTTGCAATT+TGG | - | chr1_4:66221984-66222003 | None:intergenic | 40.0% |
| GAGAAGAGTGAGAATGAGAT+CGG | - | chr1_4:66222002-66222021 | None:intergenic | 40.0% | |
| ! | GGTGATTTTCTTTCTTCTGG+AGG | - | chr1_4:66222034-66222053 | None:intergenic | 40.0% |
| GCAGTATTTGAACATCTTCG+AGG | + | chr1_4:66222064-66222083 | Msa0178800:CDS | 40.0% | |
| ! | ACATCTTCGAGGAAAAGTGT+TGG | + | chr1_4:66222075-66222094 | Msa0178800:CDS | 40.0% |
| GCAGATGCTTGGTTATGTTT+AGG | + | chr1_4:66222169-66222188 | Msa0178800:CDS | 40.0% | |
| ATGTTTGACACACACGTTCA+CGG | - | chr1_4:66222566-66222585 | None:intergenic | 40.0% | |
| ! | ACTAATAGCATTTGGAGCCA+TGG | + | chr1_4:66222593-66222612 | Msa0178800:intron | 40.0% |
| AGCCATGGTTAGAGAATCTA+TGG | + | chr1_4:66222608-66222627 | Msa0178800:intron | 40.0% | |
| GACCATAGATTCTCTAACCA+TGG | - | chr1_4:66222613-66222632 | None:intergenic | 40.0% | |
| AAAACTCGGTATTTGGCCTA+AGG | + | chr1_4:66222922-66222941 | Msa0178800:intron | 40.0% | |
| !! | AGCATACTGGCTTAAAATGG+GGG | - | chr1_4:66222987-66223006 | None:intergenic | 40.0% |
| CAAGTCCATACATAGCATAC+TGG | - | chr1_4:66223000-66223019 | None:intergenic | 40.0% | |
| CAGTATGCTATGTATGGACT+TGG | + | chr1_4:66222998-66223017 | Msa0178800:intron | 40.0% | |
| TGGTATTAACCCATTTGGGT+TGG | - | chr1_4:66223104-66223123 | None:intergenic | 40.0% | |
| GTCCTTTCTTCACTGATCTT+AGG | + | chr1_4:66223439-66223458 | Msa0178800:intron | 40.0% | |
| TACTAACCGGTCAGATGATT+TGG | + | chr1_4:66223470-66223489 | Msa0178800:intron | 40.0% | |
| TCTAGCTACGGCATAAAGAT+TGG | - | chr1_4:66223521-66223540 | None:intergenic | 40.0% | |
| GACAGTTATAATGAGACGGA+GGG | - | chr1_4:66223771-66223790 | None:intergenic | 40.0% | |
| TGACAGTTATAATGAGACGG+AGG | - | chr1_4:66223772-66223791 | None:intergenic | 40.0% | |
| TGTATTGTGCACGGTTCTTA+AGG | - | chr1_4:66223989-66224008 | None:intergenic | 40.0% | |
| ! | TAATTCTAGACTAGGTTGGC+TGG | + | chr1_4:66224097-66224116 | Msa0178800:intron | 40.0% |
| TGATCATGCACACATGTATG+CGG | + | chr1_4:66224328-66224347 | Msa0178800:intron | 40.0% | |
| !! | TGAAAGCATTCAACATGCCA+AGG | + | chr1_4:66224590-66224609 | Msa0178800:CDS | 40.0% |
| ATCCAAAGCAATTGCTTCCT+TGG | - | chr1_4:66224610-66224629 | None:intergenic | 40.0% | |
| ! | AGCAATTGCTTTGGATGTCA+AGG | + | chr1_4:66224614-66224633 | Msa0178800:CDS | 40.0% |
| ! | ATTGCTTTGGATGTCAAGGA+TGG | + | chr1_4:66224618-66224637 | Msa0178800:CDS | 40.0% |
| ! | TTGCTTTGGATGTCAAGGAT+GGG | + | chr1_4:66224619-66224638 | Msa0178800:CDS | 40.0% |
| GGCAACCAGAAAAGAATAAC+TGG | - | chr1_4:66224880-66224899 | None:intergenic | 40.0% | |
| TTAAGGTAGCAAGTCTCTTG+GGG | - | chr1_4:66224901-66224920 | None:intergenic | 40.0% | |
| CATTAAGGTAGCAAGTCTCT+TGG | - | chr1_4:66224903-66224922 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTGTCACTGGAGGT+TGG | + | chr1_4:66225108-66225127 | Msa0178800:CDS | 40.0% |
| GCTGTAAGTATGAAGAGGAA+TGG | + | chr1_4:66225173-66225192 | Msa0178800:intron | 40.0% | |
| GGAAGACCTAACCAAATGTT+TGG | + | chr1_4:66225268-66225287 | Msa0178800:intron | 40.0% | |
| ATGTACCAGGAGAAAGATGA+AGG | + | chr1_4:66225296-66225315 | Msa0178800:intron | 40.0% | |
| TGTACCAGGAGAAAGATGAA+GGG | + | chr1_4:66225297-66225316 | Msa0178800:intron | 40.0% | |
| GTCTTTGTCAGAGAAGAGTT+TGG | + | chr1_4:66225402-66225421 | Msa0178800:intron | 40.0% | |
| ! | TGCACATATTGTGTATTGGC+TGG | + | chr1_4:66225550-66225569 | Msa0178800:intron | 40.0% |
| ! | TAACTTGATATCCTGGCTTG+GGG | + | chr1_4:66225833-66225852 | Msa0178800:intron | 40.0% |
| !!! | TCATCACCTTATTTTGAGGG+AGG | + | chr1_4:66225922-66225941 | Msa0178800:intron | 40.0% |
| TATTAAGACCCTCTGACAGA+AGG | - | chr1_4:66226153-66226172 | None:intergenic | 40.0% | |
| ! | AATAGAGCTCTAGCAGTAGA+CGG | + | chr1_4:66226169-66226188 | Msa0178800:CDS | 40.0% |
| GAAAGAGGGTTACAAATGCA+AGG | - | chr1_4:66226305-66226324 | None:intergenic | 40.0% | |
| TGCATTTGTAACCCTCTTTC+TGG | + | chr1_4:66226305-66226324 | Msa0178800:intron | 40.0% | |
| CATAGTATAGGCGTATTCAC+GGG | - | chr1_4:66226430-66226449 | None:intergenic | 40.0% | |
| ! | TTTTCCAGTGGGTATTTGGT+CGG | + | chr1_4:66226538-66226557 | Msa0178800:intron | 40.0% |
| TGGAGGTGAAAAAAGTGGTT+GGG | + | chr1_4:66226563-66226582 | Msa0178800:intron | 40.0% | |
| ! | AGCTATAAACGCTGCTTTAG+AGG | + | chr1_4:66226625-66226644 | Msa0178800:intron | 40.0% |
| ! | GCTATAAACGCTGCTTTAGA+GGG | + | chr1_4:66226626-66226645 | Msa0178800:intron | 40.0% |
| TATACAAAGGAGGGAAAAGG+TGG | - | chr1_4:66226763-66226782 | None:intergenic | 40.0% | |
| AGACAAGAACAAGATCATCC+AGG | - | chr1_4:66227001-66227020 | None:intergenic | 40.0% | |
| GAGAGAATGAATCATGCAAC+TGG | - | chr1_4:66227217-66227236 | None:intergenic | 40.0% | |
| GTCCATAAAATCATGTGCTG+TGG | + | chr1_4:66227348-66227367 | Msa0178800:intron | 40.0% | |
| ACATCAACGTCACGAAAACA+AGG | - | chr1_4:66227937-66227956 | None:intergenic | 40.0% | |
| TGATGTGTCCTGGAAAGAAA+AGG | + | chr1_4:66227951-66227970 | Msa0178800:CDS | 40.0% | |
| ATTTAGCAGTGGTCTGTTCA+TGG | - | chr1_4:66228244-66228263 | None:intergenic | 40.0% | |
| GCAACTCATCTATTTAGCAG+TGG | - | chr1_4:66228255-66228274 | None:intergenic | 40.0% | |
| TATAGACACTGTATGCGACA+TGG | + | chr1_4:66228454-66228473 | Msa0178800:three_prime_UTR | 40.0% | |
| ATCTCACTCCTCGAATGGAA+TGG | - | chr1_4:66221836-66221855 | None:intergenic | 45.0% | |
| ATTCCATTCGAGGAGTGAGA+TGG | + | chr1_4:66221835-66221854 | Msa0178800:exon | 45.0% | |
| AGGAGTGAGATGGAGAATTC+AGG | + | chr1_4:66221845-66221864 | Msa0178800:exon | 45.0% | |
| !! | TTCTGTCGTCAGGGTTTTGT+GGG | - | chr1_4:66221958-66221977 | None:intergenic | 45.0% |
| ATTTGGAGGTTCTGTCGTCA+GGG | - | chr1_4:66221967-66221986 | None:intergenic | 45.0% | |
| AATTTGGAGGTTCTGTCGTC+AGG | - | chr1_4:66221968-66221987 | None:intergenic | 45.0% | |
| !! | GGAGTGTTGTTGCAATTTGG+AGG | - | chr1_4:66221981-66222000 | None:intergenic | 45.0% |
| TCAAATACTGCTCGTTGCGT+AGG | - | chr1_4:66222055-66222074 | None:intergenic | 45.0% | |
| ATCCATCTCTTGCAGATGCT+TGG | + | chr1_4:66222158-66222177 | Msa0178800:CDS | 45.0% | |
| AACCAAGCATCTGCAAGAGA+TGG | - | chr1_4:66222163-66222182 | None:intergenic | 45.0% | |
| TAGTAAAGCTTATGGGACGG+AGG | + | chr1_4:66222534-66222553 | Msa0178800:intron | 45.0% | |
| GTGAACGTGTGTGTCAAACA+TGG | + | chr1_4:66222565-66222584 | Msa0178800:intron | 45.0% | |
| TGTGCTCCTATCAAGGTCTT+AGG | - | chr1_4:66223052-66223071 | None:intergenic | 45.0% | |
| !!! | TTACTTTTTCCTCCGGACTC+CGG | + | chr1_4:66223183-66223202 | Msa0178800:intron | 45.0% |
| !!! | GAGTACGTATTGGTTTTGGC+GGG | - | chr1_4:66223749-66223768 | None:intergenic | 45.0% |
| !!! | GGAGTACGTATTGGTTTTGG+CGG | - | chr1_4:66223750-66223769 | None:intergenic | 45.0% |
| !!! | GAGGGAGTACGTATTGGTTT+TGG | - | chr1_4:66223753-66223772 | None:intergenic | 45.0% |
| !! | AGATGATTAGAAGGGGCACT+CGG | - | chr1_4:66224048-66224067 | None:intergenic | 45.0% |
| AGGTTTATGTAAGGCGCAGA+GGG | - | chr1_4:66224131-66224150 | None:intergenic | 45.0% | |
| AAGGTTTATGTAAGGCGCAG+AGG | - | chr1_4:66224132-66224151 | None:intergenic | 45.0% | |
| TCGACTGCAAACAATCTGTG+GGG | - | chr1_4:66224171-66224190 | None:intergenic | 45.0% | |
| GTCGACTGCAAACAATCTGT+GGG | - | chr1_4:66224172-66224191 | None:intergenic | 45.0% | |
| AGTCGACTGCAAACAATCTG+TGG | - | chr1_4:66224173-66224192 | None:intergenic | 45.0% | |
| ACAGATTGTTTGCAGTCGAC+TGG | + | chr1_4:66224172-66224191 | Msa0178800:intron | 45.0% | |
| GATAAAGAAACCTGGTGGTC+TGG | + | chr1_4:66224242-66224261 | Msa0178800:intron | 45.0% | |
| GTACAGAAACTGCTTGCAAG+CGG | + | chr1_4:66224272-66224291 | Msa0178800:intron | 45.0% | |
| GAGCAACGACTAAGGGAAAT+TGG | + | chr1_4:66224377-66224396 | Msa0178800:intron | 45.0% | |
| ATGGAGTTGAATGGGGAAAG+TGG | + | chr1_4:66224413-66224432 | Msa0178800:intron | 45.0% | |
| TGCCAAGGAAGCAATTGCTT+TGG | + | chr1_4:66224605-66224624 | Msa0178800:CDS | 45.0% | |
| ATGTCAAGGATGGGAACTCT+TGG | + | chr1_4:66224628-66224647 | Msa0178800:CDS | 45.0% | |
| TGATCCCTTCATCTTTCTCC+TGG | - | chr1_4:66225304-66225323 | None:intergenic | 45.0% | |
| AACTATGATAGGGCCCTTAG+TGG | + | chr1_4:66225625-66225644 | Msa0178800:CDS | 45.0% | |
| AGCAGCCTCAAATCCACTAA+GGG | - | chr1_4:66225641-66225660 | None:intergenic | 45.0% | |
| ! | ATTTGAGGCTGCTGCTTCAA+AGG | + | chr1_4:66225648-66225667 | Msa0178800:CDS | 45.0% |
| !! | AACTTGATATCCTGGCTTGG+GGG | + | chr1_4:66225834-66225853 | Msa0178800:intron | 45.0% |
| AAGCTGCCTCCCTCAAAATA+AGG | - | chr1_4:66225931-66225950 | None:intergenic | 45.0% | |
| TACCATAGACCTTCTGTCAG+AGG | + | chr1_4:66226141-66226160 | Msa0178800:CDS | 45.0% | |
| ACCATAGACCTTCTGTCAGA+GGG | + | chr1_4:66226142-66226161 | Msa0178800:CDS | 45.0% | |
| ! | ATAGAGCTCTAGCAGTAGAC+GGG | + | chr1_4:66226170-66226189 | Msa0178800:CDS | 45.0% |
| ! | TCTGGAGCAGAAGACTTACA+GGG | - | chr1_4:66226233-66226252 | None:intergenic | 45.0% |
| !! | TTCTGGAGCAGAAGACTTAC+AGG | - | chr1_4:66226234-66226253 | None:intergenic | 45.0% |
| TTTCCAGTGGGTATTTGGTC+GGG | + | chr1_4:66226539-66226558 | Msa0178800:intron | 45.0% | |
| GTGGAGGTGAAAAAAGTGGT+TGG | + | chr1_4:66226562-66226581 | Msa0178800:intron | 45.0% | |
| CTTGCAGTCTTCGCAGAAAT+TGG | + | chr1_4:66226974-66226993 | Msa0178800:intron | 45.0% | |
| TTATGGTGTACGTCAGGATG+TGG | + | chr1_4:66227081-66227100 | Msa0178800:CDS | 45.0% | |
| ! | TGATGGGGTCTTATATCAGC+TGG | - | chr1_4:66227473-66227492 | None:intergenic | 45.0% |
| GCTGATCTCCTCCTTTAATC+TGG | - | chr1_4:66227900-66227919 | None:intergenic | 45.0% | |
| CCAGGCGTATAGATTTGAAC+TGG | - | chr1_4:66228138-66228157 | None:intergenic | 45.0% | |
| CCAGTTCAAATCTATACGCC+TGG | + | chr1_4:66228135-66228154 | Msa0178800:CDS | 45.0% | |
| GCACTTGCTCATAGAAATCC+AGG | - | chr1_4:66228156-66228175 | None:intergenic | 45.0% | |
| !! | GATGTACGAATAGCTTGCTG+AGG | - | chr1_4:66228202-66228221 | None:intergenic | 45.0% |
| !! | AATTTAAAGATAATAATAAA+TGG | - | chr1_4:66223124-66223143 | None:intergenic | 5.0% |
| !!! | TTATTTTTTTTTTTTTTTTG+AGG | + | chr1_4:66228565-66228584 | Msa0178800:three_prime_UTR | 5.0% |
| TCACTCCTCGAATGGAATGG+AGG | - | chr1_4:66221833-66221852 | None:intergenic | 50.0% | |
| TCTCCATCTCACTCCTCGAA+TGG | - | chr1_4:66221841-66221860 | None:intergenic | 50.0% | |
| GAGATGGAGAATTCAGGCAG+CGG | + | chr1_4:66221851-66221870 | Msa0178800:exon | 50.0% | |
| ! | GTTCTGTCGTCAGGGTTTTG+TGG | - | chr1_4:66221959-66221978 | None:intergenic | 50.0% |
| ATTTGGCCTAAGGACATCCG+AGG | + | chr1_4:66222932-66222951 | Msa0178800:intron | 50.0% | |
| TTTGGCCTAAGGACATCCGA+GGG | + | chr1_4:66222933-66222952 | Msa0178800:intron | 50.0% | |
| TATGGACTTGGCCACCGAAT+TGG | + | chr1_4:66223010-66223029 | Msa0178800:intron | 50.0% | |
| GGTCTTAGGTTTGATTCCCC+CGG | - | chr1_4:66223038-66223057 | None:intergenic | 50.0% | |
| CTTGGAGTGTGCTCCTATCA+AGG | - | chr1_4:66223059-66223078 | None:intergenic | 50.0% | |
| ! | CTTGATAGGAGCACACTCCA+AGG | + | chr1_4:66223057-66223076 | Msa0178800:intron | 50.0% |
| CAGTGAAGAAAGGACAGACG+AGG | - | chr1_4:66223434-66223453 | None:intergenic | 50.0% | |
| !!! | CGTATTGGTTTTGGCGGGTT+GGG | - | chr1_4:66223744-66223763 | None:intergenic | 50.0% |
| !!! | ACGTATTGGTTTTGGCGGGT+TGG | - | chr1_4:66223745-66223764 | None:intergenic | 50.0% |
| CTGCAAACAATCTGTGGGGT+AGG | - | chr1_4:66224167-66224186 | None:intergenic | 50.0% | |
| !! | AACCTGGTGGTCTGGTCTTA+AGG | + | chr1_4:66224250-66224269 | Msa0178800:intron | 50.0% |
| TACCTTAAGACCAGACCACC+AGG | - | chr1_4:66224255-66224274 | None:intergenic | 50.0% | |
| AGGAGAGTGAGCAACGACTA+AGG | + | chr1_4:66224369-66224388 | Msa0178800:intron | 50.0% | |
| GGAGAGTGAGCAACGACTAA+GGG | + | chr1_4:66224370-66224389 | Msa0178800:intron | 50.0% | |
| ACCTGATTTCGCAGCAAGCA+CGG | - | chr1_4:66224544-66224563 | None:intergenic | 50.0% | |
| !! | TAGGGCCCTTAGTGGATTTG+AGG | + | chr1_4:66225633-66225652 | Msa0178800:CDS | 50.0% |
| CAGCAGCCTCAAATCCACTA+AGG | - | chr1_4:66225642-66225661 | None:intergenic | 50.0% | |
| GAAAAAGAATCCCCCAAGCC+AGG | - | chr1_4:66225847-66225866 | None:intergenic | 50.0% | |
| AGCTAAGCGAATCGCCTCTT+TGG | + | chr1_4:66225986-66226005 | Msa0178800:CDS | 50.0% | |
| AGCCAATGATGCTGCCAAAG+AGG | - | chr1_4:66226003-66226022 | None:intergenic | 50.0% | |
| ACCCTCTGACAGAAGGTCTA+TGG | - | chr1_4:66226146-66226165 | None:intergenic | 50.0% | |
| CTGGAGCAGAAGACTTACAG+GGG | - | chr1_4:66226232-66226251 | None:intergenic | 50.0% | |
| AGTATAGGCGTATTCACGGG+AGG | - | chr1_4:66226427-66226446 | None:intergenic | 50.0% | |
| TTCCAGTGGGTATTTGGTCG+GGG | + | chr1_4:66226540-66226559 | Msa0178800:intron | 50.0% | |
| GTCTTCGCAGAAATTGGACC+TGG | + | chr1_4:66226980-66226999 | Msa0178800:intron | 50.0% | |
| TTCGTGACGTTGATGTGTCC+TGG | + | chr1_4:66227941-66227960 | Msa0178800:CDS | 50.0% | |
| TTGGCCTAAGGACATCCGAG+GGG | + | chr1_4:66222934-66222953 | Msa0178800:intron | 55.0% | |
| AATCCCAACCGTCCACTTGC+CGG | + | chr1_4:66222960-66222979 | Msa0178800:intron | 55.0% | |
| ! | ACTGGCTTAAAATGGGGGCC+CGG | - | chr1_4:66222982-66223001 | None:intergenic | 55.0% |
| ! | TGATTCCCCCGGTGCCAATT+CGG | - | chr1_4:66223027-66223046 | None:intergenic | 55.0% |
| ACCACTCGGCCAACCCAAAT+GGG | + | chr1_4:66223092-66223111 | Msa0178800:intron | 55.0% | |
| GAAACCAAGACTCCGGAGTC+CGG | - | chr1_4:66223198-66223217 | None:intergenic | 55.0% | |
| ! | GAGACGGAGGGAGTACGTAT+TGG | - | chr1_4:66223759-66223778 | None:intergenic | 55.0% |
| GTAAGGCGCAGAGGGTCAAT+GGG | - | chr1_4:66224123-66224142 | None:intergenic | 55.0% | |
| TGTAAGGCGCAGAGGGTCAA+TGG | - | chr1_4:66224124-66224143 | None:intergenic | 55.0% | |
| ! | ACCGTGCTTGCTGCGAAATC+AGG | + | chr1_4:66224540-66224559 | Msa0178800:intron | 55.0% |
| ! | GCTTGCTGCGAAATCAGGTG+CGG | + | chr1_4:66224545-66224564 | Msa0178800:intron | 55.0% |
| ! | GCTGCTGCTTCAAAGGATCC+AGG | + | chr1_4:66225655-66225674 | Msa0178800:CDS | 55.0% |
| CGCCTCTTTGGCAGCATCAT+TGG | + | chr1_4:66225998-66226017 | Msa0178800:CDS | 55.0% | |
| ! | AGCTCTAGCAGTAGACGGGA+AGG | + | chr1_4:66226174-66226193 | Msa0178800:CDS | 55.0% |
| CGGGGTGGAGGTGAAAAAAG+TGG | + | chr1_4:66226558-66226577 | Msa0178800:intron | 55.0% | |
| CTGCGGTTGTTACCCAGACT+TGG | - | chr1_4:66228331-66228350 | None:intergenic | 55.0% | |
| TGGACCCCTCGGATGTCCTT+AGG | - | chr1_4:66222941-66222960 | None:intergenic | 60.0% | |
| ACGGTTGGGATTGGACCCCT+CGG | - | chr1_4:66222952-66222971 | None:intergenic | 60.0% | |
| GGCAAGTGGACGGTTGGGAT+TGG | - | chr1_4:66222961-66222980 | None:intergenic | 60.0% | |
| ATCCCAACCGTCCACTTGCC+GGG | + | chr1_4:66222961-66222980 | Msa0178800:intron | 60.0% | |
| TAAAATGGGGGCCCGGCAAG+TGG | - | chr1_4:66222975-66222994 | None:intergenic | 60.0% | |
| CTTGGCCACCGAATTGGCAC+CGG | + | chr1_4:66223016-66223035 | Msa0178800:intron | 60.0% | |
| TTGGCCACCGAATTGGCACC+GGG | + | chr1_4:66223017-66223036 | Msa0178800:intron | 60.0% | |
| !! | TTGGGTTGGCCGAGTGGTGT+GGG | - | chr1_4:66223090-66223109 | None:intergenic | 60.0% |
| !! | TTTGGGTTGGCCGAGTGGTG+TGG | - | chr1_4:66223091-66223110 | None:intergenic | 60.0% |
| CACCACTCGGCCAACCCAAA+TGG | + | chr1_4:66223091-66223110 | Msa0178800:intron | 60.0% | |
| !! | ACCCATTTGGGTTGGCCGAG+TGG | - | chr1_4:66223096-66223115 | None:intergenic | 60.0% |
| !!! | TTTTGGCGGGTTGGGAGAGG+AGG | - | chr1_4:66223736-66223755 | None:intergenic | 60.0% |
| !!! | TGGTTTTGGCGGGTTGGGAG+AGG | - | chr1_4:66223739-66223758 | None:intergenic | 60.0% |
| TCCAGGTCTCAACGCTGCAG+AGG | + | chr1_4:66225672-66225691 | Msa0178800:CDS | 60.0% | |
| ! | TCCTCTGCAGCGTTGAGACC+TGG | - | chr1_4:66225676-66225695 | None:intergenic | 60.0% |
| AGGTCTCAACGCTGCAGAGG+AGG | + | chr1_4:66225675-66225694 | Msa0178800:CDS | 60.0% | |
| CACCCCGACCAAATACCCAC+TGG | - | chr1_4:66226545-66226564 | None:intergenic | 60.0% | |
| CAGTGGGTATTTGGTCGGGG+TGG | + | chr1_4:66226543-66226562 | Msa0178800:intron | 60.0% | |
| TGGGTATTTGGTCGGGGTGG+AGG | + | chr1_4:66226546-66226565 | Msa0178800:intron | 60.0% | |
| TGGCCACCGAATTGGCACCG+GGG | + | chr1_4:66223018-66223037 | Msa0178800:intron | 65.0% | |
| ! | TTCCCCCGGTGCCAATTCGG+TGG | - | chr1_4:66223024-66223043 | None:intergenic | 65.0% |
| GTGGTGTGGGCTTCGGACCT+TGG | - | chr1_4:66223077-66223096 | None:intergenic | 65.0% | |
| GGTCCGAAGCCCACACCACT+CGG | + | chr1_4:66223078-66223097 | Msa0178800:intron | 65.0% | |
| TGGCCGAGTGGTGTGGGCTT+CGG | - | chr1_4:66223084-66223103 | None:intergenic | 65.0% | |
| TCCTCCGGACTCCGGAGTCT+TGG | + | chr1_4:66223191-66223210 | Msa0178800:intron | 65.0% | |
| ACCAAGACTCCGGAGTCCGG+AGG | - | chr1_4:66223195-66223214 | None:intergenic | 65.0% | |
| GGCCCGGCAAGTGGACGGTT+GGG | - | chr1_4:66222966-66222985 | None:intergenic | 70.0% | |
| ATGGGGGCCCGGCAAGTGGA+CGG | - | chr1_4:66222971-66222990 | None:intergenic | 70.0% | |
| ! | GGCCACCGAATTGGCACCGG+GGG | + | chr1_4:66223019-66223038 | Msa0178800:intron | 70.0% |
| !! | GGCGGGTTGGGAGAGGAGGA+AGG | - | chr1_4:66223732-66223751 | None:intergenic | 70.0% |
| GGGCCCGGCAAGTGGACGGT+TGG | - | chr1_4:66222967-66222986 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 66221738 | 66228643 | 66221738 | ID=Msa0178800;Name=Msa0178800 |
| chr1_4 | mRNA | 66221738 | 66228643 | 66221738 | ID=Msa0178800-mRNA-1;Parent=Msa0178800;Name=Msa0178800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=116|1|1|1|1|1|11|397|423 |
| chr1_4 | exon | 66221738 | 66222258 | 66221738 | ID=Msa0178800-mRNA-1:exon:21610;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66223286 | 66223343 | 66223286 | ID=Msa0178800-mRNA-1:exon:21611;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66224562 | 66224651 | 66224562 | ID=Msa0178800-mRNA-1:exon:21612;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66225081 | 66225175 | 66225081 | ID=Msa0178800-mRNA-1:exon:21613;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66225305 | 66225358 | 66225305 | ID=Msa0178800-mRNA-1:exon:21614;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66225607 | 66225744 | 66225607 | ID=Msa0178800-mRNA-1:exon:21615;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66225975 | 66226032 | 66225975 | ID=Msa0178800-mRNA-1:exon:21616;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66226119 | 66226233 | 66226119 | ID=Msa0178800-mRNA-1:exon:21617;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66227033 | 66227102 | 66227033 | ID=Msa0178800-mRNA-1:exon:21618;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66227901 | 66227972 | 66227901 | ID=Msa0178800-mRNA-1:exon:21619;Parent=Msa0178800-mRNA-1 |
| chr1_4 | exon | 66228130 | 66228643 | 66228130 | ID=Msa0178800-mRNA-1:exon:21620;Parent=Msa0178800-mRNA-1 |
| chr1_4 | five_prime_UTR | 66221738 | 66221853 | 66221738 | ID=Msa0178800-mRNA-1:five_prime_utr;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66221854 | 66222258 | 66221854 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66223286 | 66223343 | 66223286 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66224562 | 66224651 | 66224562 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66225081 | 66225175 | 66225081 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66225305 | 66225358 | 66225305 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66225607 | 66225744 | 66225607 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66225975 | 66226032 | 66225975 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66226119 | 66226233 | 66226119 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66227033 | 66227102 | 66227033 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66227901 | 66227972 | 66227901 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | CDS | 66228130 | 66228246 | 66228130 | ID=Msa0178800-mRNA-1:cds;Parent=Msa0178800-mRNA-1 |
| chr1_4 | three_prime_UTR | 66228247 | 66228643 | 66228247 | ID=Msa0178800-mRNA-1:three_prime_utr;Parent=Msa0178800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
