Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437910 | XP_003625829.2 | 93.939 | 132 | 3 | 1 | 1 | 127 | 1 | 132 | 7.32e-81 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437910 | G7KQV5 | 93.939 | 132 | 3 | 1 | 1 | 127 | 1 | 132 | 3.49e-81 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa1437910 | 0.816908 | 4.339052e-52 | -8.615850e-47 |
| Msa0006040 | Msa1437910 | 0.832094 | 1.150183e-55 | -8.615850e-47 |
| Msa0007440 | Msa1437910 | 0.808404 | 3.149061e-50 | -8.615850e-47 |
| Msa0015090 | Msa1437910 | 0.808598 | 2.862318e-50 | -8.615850e-47 |
| Msa0028660 | Msa1437910 | 0.806510 | 7.941386e-50 | -8.615850e-47 |
| Msa0029850 | Msa1437910 | 0.821876 | 3.197580e-53 | -8.615850e-47 |
| Msa0032470 | Msa1437910 | 0.812274 | 4.603552e-51 | -8.615850e-47 |
| Msa0036140 | Msa1437910 | 0.806907 | 6.549181e-50 | -8.615850e-47 |
| Msa0037880 | Msa1437910 | 0.824773 | 6.730179e-54 | -8.615850e-47 |
| Msa0049750 | Msa1437910 | 0.802576 | 5.253627e-49 | -8.615850e-47 |
| Msa0051210 | Msa1437910 | 0.809409 | 1.919031e-50 | -8.615850e-47 |
| Msa0051450 | Msa1437910 | 0.813922 | 2.002248e-51 | -8.615850e-47 |
| Msa0051860 | Msa1437910 | 0.801945 | 7.085702e-49 | -8.615850e-47 |
| Msa0054750 | Msa1437910 | 0.834675 | 2.613725e-56 | -8.615850e-47 |
| Msa0056030 | Msa1437910 | 0.823482 | 1.352697e-53 | -8.615850e-47 |
| Msa0064300 | Msa1437910 | 0.825302 | 5.047511e-54 | -8.615850e-47 |
| Msa0071250 | Msa1437910 | 0.808351 | 3.232071e-50 | -8.615850e-47 |
| Msa0077180 | Msa1437910 | 0.820635 | 6.180954e-53 | -8.615850e-47 |
| Msa0083280 | Msa1437910 | 0.802522 | 5.390673e-49 | -8.615850e-47 |
| Msa0086420 | Msa1437910 | 0.830024 | 3.707051e-55 | -8.615850e-47 |
| Msa0096030 | Msa1437910 | 0.831815 | 1.347783e-55 | -8.615850e-47 |
| Msa0098320 | Msa1437910 | 0.801394 | 9.191243e-49 | -8.615850e-47 |
| Msa0098340 | Msa1437910 | 0.829605 | 4.688952e-55 | -8.615850e-47 |
| Msa0099650 | Msa1437910 | 0.813060 | 3.098495e-51 | -8.615850e-47 |
| Msa0101830 | Msa1437910 | 0.824967 | 6.058556e-54 | -8.615850e-47 |
| Msa1357890 | Msa1437910 | 0.807526 | 4.841777e-50 | -8.615850e-47 |
| Msa1359630 | Msa1437910 | 0.812875 | 3.402472e-51 | -8.615850e-47 |
| Msa1371090 | Msa1437910 | 0.803351 | 3.634008e-49 | -8.615850e-47 |
| Msa1371240 | Msa1437910 | 0.811961 | 5.386588e-51 | -8.615850e-47 |
| Msa1371940 | Msa1437910 | 0.800477 | 1.414883e-48 | -8.615850e-47 |
| Msa1372150 | Msa1437910 | 0.805770 | 1.137226e-49 | -8.615850e-47 |
| Msa1374710 | Msa1437910 | 0.804733 | 1.874435e-49 | -8.615850e-47 |
| Msa1377080 | Msa1437910 | 0.809864 | 1.532864e-50 | -8.615850e-47 |
| Msa1388860 | Msa1437910 | 0.833885 | 4.124035e-56 | -8.615850e-47 |
| Msa1396400 | Msa1437910 | -0.845816 | 3.208165e-59 | -8.615850e-47 |
| Msa1397120 | Msa1437910 | 0.806122 | 9.588466e-50 | -8.615850e-47 |
| Msa1401990 | Msa1437910 | 0.801997 | 6.912884e-49 | -8.615850e-47 |
| Msa1403340 | Msa1437910 | 0.836540 | 8.813141e-57 | -8.615850e-47 |
| Msa1403890 | Msa1437910 | 0.803795 | 2.939593e-49 | -8.615850e-47 |
| Msa1406110 | Msa1437910 | -0.832407 | 9.623902e-56 | -8.615850e-47 |
| Msa1412890 | Msa1437910 | 0.829590 | 4.728294e-55 | -8.615850e-47 |
| Msa1419960 | Msa1437910 | 0.803590 | 3.242091e-49 | -8.615850e-47 |
| Msa1423820 | Msa1437910 | 0.813064 | 3.091895e-51 | -8.615850e-47 |
| Msa1437130 | Msa1437910 | 0.801550 | 8.542402e-49 | -8.615850e-47 |
| Msa1437910 | Msa1444250 | -0.800294 | 1.541594e-48 | -8.615850e-47 |
| Msa1437910 | Msa1444740 | 0.832135 | 1.123246e-55 | -8.615850e-47 |
| Msa1437910 | Msa1460050 | 0.801553 | 8.527163e-49 | -8.615850e-47 |
| Msa1437910 | Msa1462840 | 0.802537 | 5.352944e-49 | -8.615850e-47 |
| Msa0608710 | Msa1437910 | 0.830184 | 3.387964e-55 | -8.615850e-47 |
| Msa0610130 | Msa1437910 | 0.805928 | 1.053085e-49 | -8.615850e-47 |
| Msa0610180 | Msa1437910 | 0.805070 | 1.594193e-49 | -8.615850e-47 |
| Msa0617640 | Msa1437910 | 0.803598 | 3.229983e-49 | -8.615850e-47 |
| Msa0621790 | Msa1437910 | 0.823315 | 1.479806e-53 | -8.615850e-47 |
| Msa0651270 | Msa1437910 | 0.812389 | 4.345907e-51 | -8.615850e-47 |
| Msa0654620 | Msa1437910 | 0.804757 | 1.852959e-49 | -8.615850e-47 |
| Msa0661210 | Msa1437910 | 0.815537 | 8.785053e-52 | -8.615850e-47 |
| Msa0693380 | Msa1437910 | 0.803793 | 2.941686e-49 | -8.615850e-47 |
| Msa0709160 | Msa1437910 | 0.810920 | 9.065765e-51 | -8.615850e-47 |
| Msa0711100 | Msa1437910 | 0.802874 | 4.560536e-49 | -8.615850e-47 |
| Msa0721280 | Msa1437910 | 0.807970 | 3.895770e-50 | -8.615850e-47 |
| Msa0724560 | Msa1437910 | 0.800890 | 1.165667e-48 | -8.615850e-47 |
| Msa0725450 | Msa1437910 | 0.808767 | 2.633849e-50 | -8.615850e-47 |
| Msa0731180 | Msa1437910 | 0.818631 | 1.771999e-52 | -8.615850e-47 |
| Msa0748070 | Msa1437910 | 0.801888 | 7.281288e-49 | -8.615850e-47 |
| Msa0750850 | Msa1437910 | 0.819506 | 1.120690e-52 | -8.615850e-47 |
| Msa0751850 | Msa1437910 | 0.811630 | 6.360941e-51 | -8.615850e-47 |
| Msa0763890 | Msa1437910 | 0.804027 | 2.630649e-49 | -8.615850e-47 |
| Msa0763920 | Msa1437910 | 0.802853 | 4.607299e-49 | -8.615850e-47 |
| Msa0766090 | Msa1437910 | 0.836427 | 9.417415e-57 | -8.615850e-47 |
| Msa0788540 | Msa1437910 | 0.826241 | 3.021920e-54 | -8.615850e-47 |
| Msa0795720 | Msa1437910 | 0.819556 | 1.091376e-52 | -8.615850e-47 |
| Msa0797970 | Msa1437910 | 0.801397 | 9.180314e-49 | -8.615850e-47 |
| Msa0801730 | Msa1437910 | 0.819775 | 9.730296e-53 | -8.615850e-47 |
| Msa0801740 | Msa1437910 | 0.805011 | 1.640136e-49 | -8.615850e-47 |
| Msa0817460 | Msa1437910 | 0.811155 | 8.064259e-51 | -8.615850e-47 |
| Msa0820850 | Msa1437910 | 0.811796 | 5.850900e-51 | -8.615850e-47 |
| Msa0827350 | Msa1437910 | -0.823791 | 1.145142e-53 | -8.615850e-47 |
| Msa0831850 | Msa1437910 | 0.808127 | 3.608543e-50 | -8.615850e-47 |
| Msa0832150 | Msa1437910 | 0.821091 | 4.855702e-53 | -8.615850e-47 |
| Msa0833460 | Msa1437910 | 0.831177 | 1.935487e-55 | -8.615850e-47 |
| Msa0125050 | Msa1437910 | 0.812097 | 5.031210e-51 | -8.615850e-47 |
| Msa0130520 | Msa1437910 | 0.813008 | 3.180470e-51 | -8.615850e-47 |
| Msa0135410 | Msa1437910 | 0.831901 | 1.283123e-55 | -8.615850e-47 |
| Msa0137570 | Msa1437910 | 0.820785 | 5.708967e-53 | -8.615850e-47 |
| Msa0138020 | Msa1437910 | 0.802284 | 6.036121e-49 | -8.615850e-47 |
| Msa0151180 | Msa1437910 | 0.808401 | 3.154259e-50 | -8.615850e-47 |
| Msa0155340 | Msa1437910 | 0.816949 | 4.248098e-52 | -8.615850e-47 |
| Msa0169820 | Msa1437910 | 0.828781 | 7.427178e-55 | -8.615850e-47 |
| Msa0170110 | Msa1437910 | -0.815670 | 8.208179e-52 | -8.615850e-47 |
| Msa0178510 | Msa1437910 | 0.805164 | 1.523371e-49 | -8.615850e-47 |
| Msa0178860 | Msa1437910 | -0.805109 | 1.564218e-49 | -8.615850e-47 |
| Msa0182570 | Msa1437910 | 0.808397 | 3.160789e-50 | -8.615850e-47 |
| Msa0187950 | Msa1437910 | 0.800499 | 1.400719e-48 | -8.615850e-47 |
| Msa0189030 | Msa1437910 | 0.826033 | 3.387628e-54 | -8.615850e-47 |
| Msa0206010 | Msa1437910 | 0.824099 | 9.697781e-54 | -8.615850e-47 |
| Msa0217680 | Msa1437910 | 0.844962 | 5.463382e-59 | -8.615850e-47 |
| Msa0236420 | Msa1437910 | 0.834586 | 2.750802e-56 | -8.615850e-47 |
| Msa1233500 | Msa1437910 | 0.800675 | 1.289299e-48 | -8.615850e-47 |
| Msa1234730 | Msa1437910 | 0.801094 | 1.059116e-48 | -8.615850e-47 |
| Msa1257800 | Msa1437910 | -0.809497 | 1.838230e-50 | -8.615850e-47 |
| Msa1270660 | Msa1437910 | 0.813733 | 2.203732e-51 | -8.615850e-47 |
| Msa1270730 | Msa1437910 | 0.810501 | 1.117059e-50 | -8.615850e-47 |
| Msa1276440 | Msa1437910 | 0.819088 | 1.395739e-52 | -8.615850e-47 |
| Msa1295330 | Msa1437910 | 0.805883 | 1.076784e-49 | -8.615850e-47 |
| Msa1295930 | Msa1437910 | 0.815163 | 1.064270e-51 | -8.615850e-47 |
| Msa1307740 | Msa1437910 | 0.829681 | 4.493733e-55 | -8.615850e-47 |
| Msa1315110 | Msa1437910 | 0.805560 | 1.258727e-49 | -8.615850e-47 |
| Msa1322200 | Msa1437910 | 0.816818 | 4.544777e-52 | -8.615850e-47 |
| Msa1331320 | Msa1437910 | 0.810285 | 1.243762e-50 | -8.615850e-47 |
| Msa1335230 | Msa1437910 | 0.804258 | 2.354638e-49 | -8.615850e-47 |
| Msa1342100 | Msa1437910 | 0.974706 | 1.249325e-138 | -8.615850e-47 |
| Msa0376910 | Msa1437910 | 0.815621 | 8.417254e-52 | -8.615850e-47 |
| Msa0383800 | Msa1437910 | 0.813643 | 2.306590e-51 | -8.615850e-47 |
| Msa0385490 | Msa1437910 | 0.800696 | 1.277108e-48 | -8.615850e-47 |
| Msa0389810 | Msa1437910 | 0.832976 | 6.950508e-56 | -8.615850e-47 |
| Msa0394340 | Msa1437910 | 0.843809 | 1.115317e-58 | -8.615850e-47 |
| Msa0397270 | Msa1437910 | 0.812239 | 4.685386e-51 | -8.615850e-47 |
| Msa0410580 | Msa1437910 | 0.804806 | 1.809734e-49 | -8.615850e-47 |
| Msa0412840 | Msa1437910 | 0.834535 | 2.834365e-56 | -8.615850e-47 |
| Msa0433410 | Msa1437910 | -0.832620 | 8.521271e-56 | -8.615850e-47 |
| Msa0434180 | Msa1437910 | 0.808785 | 2.611596e-50 | -8.615850e-47 |
| Msa0438040 | Msa1437910 | 0.813934 | 1.990364e-51 | -8.615850e-47 |
| Msa0442200 | Msa1437910 | 0.820373 | 7.100306e-53 | -8.615850e-47 |
| Msa0457510 | Msa1437910 | 0.851072 | 1.126046e-60 | -8.615850e-47 |
| Msa0468130 | Msa1437910 | 0.823017 | 1.736589e-53 | -8.615850e-47 |
| Msa0471900 | Msa1437910 | 0.806845 | 6.749521e-50 | -8.615850e-47 |
| Msa0472960 | Msa1437910 | -0.827946 | 1.181115e-54 | -8.615850e-47 |
| Msa0477130 | Msa1437910 | -0.832863 | 7.414152e-56 | -8.615850e-47 |
| Msa0982270 | Msa1437910 | 0.824696 | 7.017590e-54 | -8.615850e-47 |
| Msa0992600 | Msa1437910 | 0.809000 | 2.349357e-50 | -8.615850e-47 |
| Msa0994370 | Msa1437910 | 0.801141 | 1.035857e-48 | -8.615850e-47 |
| Msa1058170 | Msa1437910 | 0.808414 | 3.133490e-50 | -8.615850e-47 |
| Msa1071320 | Msa1437910 | 0.802967 | 4.362441e-49 | -8.615850e-47 |
| Msa1080270 | Msa1437910 | 0.811138 | 8.134566e-51 | -8.615850e-47 |
| Msa1081790 | Msa1437910 | -0.848399 | 6.283444e-60 | -8.615850e-47 |
| Msa1087990 | Msa1437910 | 0.820396 | 7.013115e-53 | -8.615850e-47 |
| Msa1100480 | Msa1437910 | 0.811528 | 6.691123e-51 | -8.615850e-47 |
| Msa1102790 | Msa1437910 | 0.816987 | 4.165408e-52 | -8.615850e-47 |
| Msa0249560 | Msa1437910 | 0.805453 | 1.325185e-49 | -8.615850e-47 |
| Msa0256330 | Msa1437910 | 0.803956 | 2.720940e-49 | -8.615850e-47 |
| Msa0257500 | Msa1437910 | 0.838577 | 2.646951e-57 | -8.615850e-47 |
| Msa0270960 | Msa1437910 | 0.837288 | 5.677520e-57 | -8.615850e-47 |
| Msa0272450 | Msa1437910 | 0.812529 | 4.049782e-51 | -8.615850e-47 |
| Msa0286670 | Msa1437910 | 0.820706 | 5.954224e-53 | -8.615850e-47 |
| Msa0287410 | Msa1437910 | 0.816815 | 4.552514e-52 | -8.615850e-47 |
| Msa0295330 | Msa1437910 | 0.814763 | 1.305494e-51 | -8.615850e-47 |
| Msa0306210 | Msa1437910 | -0.811019 | 8.630427e-51 | -8.615850e-47 |
| Msa0309270 | Msa1437910 | 0.831523 | 1.590539e-55 | -8.615850e-47 |
| Msa0319170 | Msa1437910 | 0.800842 | 1.191920e-48 | -8.615850e-47 |
| Msa0326110 | Msa1437910 | 0.823706 | 1.198551e-53 | -8.615850e-47 |
| Msa0326520 | Msa1437910 | 0.810593 | 1.066989e-50 | -8.615850e-47 |
| Msa0347610 | Msa1437910 | 0.816953 | 4.239416e-52 | -8.615850e-47 |
| Msa0358860 | Msa1437910 | 0.826689 | 2.364126e-54 | -8.615850e-47 |
| Msa1124540 | Msa1437910 | -0.809691 | 1.669816e-50 | -8.615850e-47 |
| Msa1140230 | Msa1437910 | 0.814792 | 1.285933e-51 | -8.615850e-47 |
| Msa1166090 | Msa1437910 | -0.850495 | 1.636119e-60 | -8.615850e-47 |
| Msa1174870 | Msa1437910 | 0.801609 | 8.305600e-49 | -8.615850e-47 |
| Msa1201560 | Msa1437910 | 0.800703 | 1.272430e-48 | -8.615850e-47 |
| Msa1207310 | Msa1437910 | 0.818183 | 2.239198e-52 | -8.615850e-47 |
| Msa1207470 | Msa1437910 | -0.803308 | 3.709100e-49 | -8.615850e-47 |
| Msa1208380 | Msa1437910 | 0.812196 | 4.788067e-51 | -8.615850e-47 |
| Msa0484780 | Msa1437910 | 0.804640 | 1.960316e-49 | -8.615850e-47 |
| Msa0489610 | Msa1437910 | 0.830401 | 2.998701e-55 | -8.615850e-47 |
| Msa0522070 | Msa1437910 | 0.804398 | 2.201958e-49 | -8.615850e-47 |
| Msa0579130 | Msa1437910 | 0.814802 | 1.279816e-51 | -8.615850e-47 |
| Msa0861130 | Msa1437910 | 0.813506 | 2.472358e-51 | -8.615850e-47 |
| Msa0869120 | Msa1437910 | 0.809133 | 2.200225e-50 | -8.615850e-47 |
| Msa0876360 | Msa1437910 | 0.823331 | 1.466853e-53 | -8.615850e-47 |
| Msa0879600 | Msa1437910 | 0.802547 | 5.326497e-49 | -8.615850e-47 |
| Msa0923870 | Msa1437910 | 0.809958 | 1.462654e-50 | -8.615850e-47 |
| Msa0935410 | Msa1437910 | 0.804299 | 2.309564e-49 | -8.615850e-47 |
| Msa0946280 | Msa1437910 | -0.811239 | 7.734809e-51 | -8.615850e-47 |
| Msa0958920 | Msa1437910 | 0.848050 | 7.847566e-60 | -8.615850e-47 |
| Msa0962840 | Msa1437910 | 0.820124 | 8.096022e-53 | -8.615850e-47 |
| Msa0978700 | Msa1437910 | 0.809998 | 1.434336e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437910 | MtrunA17_Chr7g0266361 | 93.939 | 132 | 3 | 1 | 1 | 127 | 1 | 132 | 6.73e-85 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437910 | AT3G10120.1 | 28.177 | 181 | 66 | 8 | 1 | 126 | 1 | 172 | 1.99e-12 | 61.2 |
Find 23 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTACATCTTGAACTTC+TGG | 0.229795 | tig0028400:+27189 | None:intergenic |
| CTCACCTTCTTGCGCTCTTT+TGG | 0.237188 | tig0028400:+27222 | None:intergenic |
| TCTCTTGTTCATGGTGAAAA+TGG | 0.241059 | tig0028400:-27075 | Msa1437910:CDS |
| TCAGGTATGCTTTGCAATAC+TGG | 0.263195 | tig0028400:+26997 | None:intergenic |
| AATAAACATGGGAAATTGTT+TGG | 0.325749 | tig0028400:-27355 | None:intergenic |
| ATCTATTGCTAGATTACTTC+AGG | 0.354532 | tig0028400:+26979 | None:intergenic |
| TTGCAAGAGATGCTGGATAA+TGG | 0.374576 | tig0028400:-27123 | Msa1437910:CDS |
| AAAACCTCTTCAGCTTTGAT+AGG | 0.399855 | tig0028400:+27261 | None:intergenic |
| GTGAAGATCATGAAAACAAA+TGG | 0.479078 | tig0028400:-27312 | Msa1437910:CDS |
| AAGATGCTATCTCTTGTTCA+TGG | 0.483231 | tig0028400:-27084 | Msa1437910:CDS |
| AAAAGTGATGATGCCTGTGC+AGG | 0.529059 | tig0028400:-27027 | Msa1437910:CDS |
| TACAGAAAAGTAGTGCAGTT+AGG | 0.532146 | tig0028400:-27173 | Msa1437910:CDS |
| TACTGGTTTCCACCCTGCAC+AGG | 0.563255 | tig0028400:+27014 | None:intergenic |
| TGTTCATGGTGAAAATGGAA+TGG | 0.589839 | tig0028400:-27070 | Msa1437910:CDS |
| AACACCTATCAAAGCTGAAG+AGG | 0.600750 | tig0028400:-27265 | Msa1437910:CDS |
| CAAGAGATGCTGGATAATGG+AGG | 0.604501 | tig0028400:-27120 | Msa1437910:CDS |
| CAAAAGAGCGCAAGAAGGTG+AGG | 0.614183 | tig0028400:-27221 | Msa1437910:CDS |
| CATGGTGAAAATGGAATGGA+TGG | 0.619170 | tig0028400:-27066 | Msa1437910:CDS |
| ATCACCAAAAGAGCGCAAGA+AGG | 0.623997 | tig0028400:-27226 | Msa1437910:CDS |
| AAGAGATGCTGGATAATGGA+GGG | 0.645439 | tig0028400:-27119 | Msa1437910:CDS |
| AAAGTGATGATGCCTGTGCA+GGG | 0.662931 | tig0028400:-27026 | Msa1437910:CDS |
| GGTGCTGCAACAAATTAATG+TGG | 0.691279 | tig0028400:-27334 | Msa1437910:CDS |
| GTGATGATGCCTGTGCAGGG+TGG | 0.757120 | tig0028400:-27023 | Msa1437910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GTGAAGATCATGAAAACAAA+TGG | - | tig0028400:27023-27042 | Msa1437910:CDS | 30.0% | |
| ! | AAAACCTCTTCAGCTTTGAT+AGG | + | tig0028400:27077-27096 | None:intergenic | 35.0% |
| TTCTGTACATCTTGAACTTC+TGG | + | tig0028400:27149-27168 | None:intergenic | 35.0% | |
| TACAGAAAAGTAGTGCAGTT+AGG | - | tig0028400:27162-27181 | Msa1437910:CDS | 35.0% | |
| AAGATGCTATCTCTTGTTCA+TGG | - | tig0028400:27251-27270 | Msa1437910:CDS | 35.0% | |
| TCTCTTGTTCATGGTGAAAA+TGG | - | tig0028400:27260-27279 | Msa1437910:CDS | 35.0% | |
| TGTTCATGGTGAAAATGGAA+TGG | - | tig0028400:27265-27284 | Msa1437910:CDS | 35.0% | |
| ! | GGTGCTGCAACAAATTAATG+TGG | - | tig0028400:27001-27020 | Msa1437910:CDS | 40.0% |
| AACACCTATCAAAGCTGAAG+AGG | - | tig0028400:27070-27089 | Msa1437910:CDS | 40.0% | |
| !!! | TCTTTTGGTGATGATGGAAG+AGG | + | tig0028400:27101-27120 | None:intergenic | 40.0% |
| GCAAAAATTGCAAGAGATGC+TGG | - | tig0028400:27205-27224 | Msa1437910:CDS | 40.0% | |
| TTGCAAGAGATGCTGGATAA+TGG | - | tig0028400:27212-27231 | Msa1437910:CDS | 40.0% | |
| !! | AAGAGATGCTGGATAATGGA+GGG | - | tig0028400:27216-27235 | Msa1437910:CDS | 40.0% |
| CATGGTGAAAATGGAATGGA+TGG | - | tig0028400:27269-27288 | Msa1437910:CDS | 40.0% | |
| TCAGGTATGCTTTGCAATAC+TGG | + | tig0028400:27341-27360 | None:intergenic | 40.0% | |
| !!! | TTGCGCTCTTTTGGTGATGA+TGG | + | tig0028400:27107-27126 | None:intergenic | 45.0% |
| ! | ATCACCAAAAGAGCGCAAGA+AGG | - | tig0028400:27109-27128 | Msa1437910:CDS | 45.0% |
| ! | CAAGAGATGCTGGATAATGG+AGG | - | tig0028400:27215-27234 | Msa1437910:CDS | 45.0% |
| ! | AAAAGTGATGATGCCTGTGC+AGG | - | tig0028400:27308-27327 | Msa1437910:CDS | 45.0% |
| ! | AAAGTGATGATGCCTGTGCA+GGG | - | tig0028400:27309-27328 | Msa1437910:CDS | 45.0% |
| ! | CTCACCTTCTTGCGCTCTTT+TGG | + | tig0028400:27116-27135 | None:intergenic | 50.0% |
| ! | CAAAAGAGCGCAAGAAGGTG+AGG | - | tig0028400:27114-27133 | Msa1437910:CDS | 50.0% |
| !! | TACTGGTTTCCACCCTGCAC+AGG | + | tig0028400:27324-27343 | None:intergenic | 55.0% |
| ! | GTGATGATGCCTGTGCAGGG+TGG | - | tig0028400:27312-27331 | Msa1437910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028400 | gene | 26987 | 27370 | 26987 | ID=Msa1437910;Name=Msa1437910 |
| tig0028400 | mRNA | 26987 | 27370 | 26987 | ID=Msa1437910-mRNA-1;Parent=Msa1437910;Name=Msa1437910-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|127 |
| tig0028400 | exon | 26987 | 27370 | 26987 | ID=Msa1437910-mRNA-1:exon:11029;Parent=Msa1437910-mRNA-1 |
| tig0028400 | CDS | 26987 | 27370 | 26987 | ID=Msa1437910-mRNA-1:cds;Parent=Msa1437910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
