Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623980 | XP_003605789.2 | 97.003 | 367 | 11 | 0 | 1 | 367 | 4 | 370 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623980 | A0A396I5A5 | 97.003 | 367 | 11 | 0 | 1 | 367 | 4 | 370 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0623980 | -0.819054 | 1.420789e-52 | -8.615850e-47 |
| Msa0004590 | Msa0623980 | 0.850610 | 1.519298e-60 | -8.615850e-47 |
| Msa0017710 | Msa0623980 | 0.800384 | 1.478074e-48 | -8.615850e-47 |
| Msa0024280 | Msa0623980 | 0.808919 | 2.444964e-50 | -8.615850e-47 |
| Msa0030760 | Msa0623980 | -0.800741 | 1.250008e-48 | -8.615850e-47 |
| Msa0043840 | Msa0623980 | 0.802781 | 4.767231e-49 | -8.615850e-47 |
| Msa0045620 | Msa0623980 | 0.819885 | 9.182748e-53 | -8.615850e-47 |
| Msa0048950 | Msa0623980 | 0.855047 | 8.196531e-62 | -8.615850e-47 |
| Msa0057860 | Msa0623980 | 0.811781 | 5.895665e-51 | -8.615850e-47 |
| Msa0059880 | Msa0623980 | 0.842198 | 2.993904e-58 | -8.615850e-47 |
| Msa0069480 | Msa0623980 | 0.817168 | 3.792264e-52 | -8.615850e-47 |
| Msa0072030 | Msa0623980 | 0.816197 | 6.261058e-52 | -8.615850e-47 |
| Msa0073270 | Msa0623980 | 0.824830 | 6.526946e-54 | -8.615850e-47 |
| Msa0099890 | Msa0623980 | 0.807534 | 4.822177e-50 | -8.615850e-47 |
| Msa0102920 | Msa0623980 | 0.842728 | 2.165555e-58 | -8.615850e-47 |
| Msa0603950 | Msa0623980 | 0.841664 | 4.142304e-58 | -8.615850e-47 |
| Msa0605350 | Msa0623980 | 0.809357 | 1.969502e-50 | -8.615850e-47 |
| Msa0605400 | Msa0623980 | 0.839267 | 1.754570e-57 | -8.615850e-47 |
| Msa0605410 | Msa0623980 | 0.825617 | 4.252288e-54 | -8.615850e-47 |
| Msa0605470 | Msa0623980 | 0.834532 | 2.838994e-56 | -8.615850e-47 |
| Msa0610190 | Msa0623980 | 0.805765 | 1.139986e-49 | -8.615850e-47 |
| Msa0612880 | Msa0623980 | -0.818917 | 1.525853e-52 | -8.615850e-47 |
| Msa0619390 | Msa0623980 | -0.801366 | 9.315105e-49 | -8.615850e-47 |
| Msa0623310 | Msa0623980 | 0.820899 | 5.375222e-53 | -8.615850e-47 |
| Msa0623980 | Msa0624050 | 0.835460 | 1.656260e-56 | -8.615850e-47 |
| Msa0623980 | Msa0625900 | -0.803391 | 3.564348e-49 | -8.615850e-47 |
| Msa0623980 | Msa0626980 | 0.823028 | 1.727120e-53 | -8.615850e-47 |
| Msa0623980 | Msa0627360 | 0.818730 | 1.683299e-52 | -8.615850e-47 |
| Msa0623980 | Msa0631700 | 0.813599 | 2.359573e-51 | -8.615850e-47 |
| Msa0623980 | Msa0643190 | 0.815405 | 9.403526e-52 | -8.615850e-47 |
| Msa0623980 | Msa0643840 | 0.813662 | 2.285219e-51 | -8.615850e-47 |
| Msa0623980 | Msa0646210 | 0.826816 | 2.204115e-54 | -8.615850e-47 |
| Msa0623980 | Msa0646260 | 0.823764 | 1.161899e-53 | -8.615850e-47 |
| Msa0623980 | Msa0651090 | 0.831630 | 1.497213e-55 | -8.615850e-47 |
| Msa0623980 | Msa0655430 | 0.801136 | 1.037958e-48 | -8.615850e-47 |
| Msa0623980 | Msa0658120 | 0.809587 | 1.757545e-50 | -8.615850e-47 |
| Msa0623980 | Msa0663580 | -0.800133 | 1.662603e-48 | -8.615850e-47 |
| Msa0623980 | Msa0663690 | -0.802546 | 5.330676e-49 | -8.615850e-47 |
| Msa0623980 | Msa0670360 | 0.815087 | 1.106306e-51 | -8.615850e-47 |
| Msa0623980 | Msa0671400 | 0.804263 | 2.349297e-49 | -8.615850e-47 |
| Msa0623980 | Msa0671640 | 0.831933 | 1.260162e-55 | -8.615850e-47 |
| Msa0623980 | Msa0673940 | 0.836340 | 9.912588e-57 | -8.615850e-47 |
| Msa0623980 | Msa0676140 | 0.823574 | 1.287270e-53 | -8.615850e-47 |
| Msa0623980 | Msa0676190 | 0.844214 | 8.681841e-59 | -8.615850e-47 |
| Msa0623980 | Msa0676200 | 0.839595 | 1.442257e-57 | -8.615850e-47 |
| Msa0623980 | Msa0678620 | 0.815657 | 8.263025e-52 | -8.615850e-47 |
| Msa0623980 | Msa0684560 | 0.801398 | 9.173628e-49 | -8.615850e-47 |
| Msa0623980 | Msa0684720 | 0.826604 | 2.476253e-54 | -8.615850e-47 |
| Msa0623980 | Msa0686020 | 0.819354 | 1.213646e-52 | -8.615850e-47 |
| Msa0623980 | Msa0702560 | -0.801748 | 7.777613e-49 | -8.615850e-47 |
| Msa0623980 | Msa0702970 | 0.809678 | 1.680794e-50 | -8.615850e-47 |
| Msa0623980 | Msa0705810 | -0.809879 | 1.520936e-50 | -8.615850e-47 |
| Msa0623980 | Msa0711240 | 0.806515 | 7.922769e-50 | -8.615850e-47 |
| Msa0623980 | Msa0716700 | 0.805434 | 1.337552e-49 | -8.615850e-47 |
| Msa0623980 | Msa0727480 | 0.836272 | 1.031074e-56 | -8.615850e-47 |
| Msa0623980 | Msa0735340 | 0.822689 | 2.070976e-53 | -8.615850e-47 |
| Msa0623980 | Msa0738410 | 0.813706 | 2.234275e-51 | -8.615850e-47 |
| Msa0623980 | Msa0758000 | 0.802226 | 6.203597e-49 | -8.615850e-47 |
| Msa0623980 | Msa0761830 | 0.845411 | 4.131254e-59 | -8.615850e-47 |
| Msa0623980 | Msa0768670 | 0.835212 | 1.914180e-56 | -8.615850e-47 |
| Msa0623980 | Msa0768720 | 0.849163 | 3.857667e-60 | -8.615850e-47 |
| Msa0623980 | Msa0772420 | 0.804708 | 1.897510e-49 | -8.615850e-47 |
| Msa0623980 | Msa0777060 | 0.804346 | 2.257239e-49 | -8.615850e-47 |
| Msa0623980 | Msa0777070 | 0.815336 | 9.738117e-52 | -8.615850e-47 |
| Msa0623980 | Msa0777250 | 0.806241 | 9.050798e-50 | -8.615850e-47 |
| Msa0623980 | Msa0787860 | 0.812772 | 3.582538e-51 | -8.615850e-47 |
| Msa0623980 | Msa0791300 | 0.819174 | 1.333832e-52 | -8.615850e-47 |
| Msa0623980 | Msa0802590 | 0.811009 | 8.672368e-51 | -8.615850e-47 |
| Msa0623980 | Msa0804170 | 0.819962 | 8.816565e-53 | -8.615850e-47 |
| Msa0623980 | Msa0814160 | 0.830803 | 2.390235e-55 | -8.615850e-47 |
| Msa0623980 | Msa0841130 | 0.835123 | 2.015800e-56 | -8.615850e-47 |
| Msa0623980 | Msa0841170 | 0.825028 | 5.859187e-54 | -8.615850e-47 |
| Msa0623980 | Msa0842180 | 0.818092 | 2.347044e-52 | -8.615850e-47 |
| Msa0623980 | Msa0847140 | 0.807026 | 6.178389e-50 | -8.615850e-47 |
| Msa0623980 | Msa0854840 | 0.822932 | 1.817757e-53 | -8.615850e-47 |
| Msa0623980 | Msa0863840 | 0.805250 | 1.461720e-49 | -8.615850e-47 |
| Msa0623980 | Msa0864160 | 0.807532 | 4.828708e-50 | -8.615850e-47 |
| Msa0623980 | Msa0883640 | 0.855557 | 5.825606e-62 | -8.615850e-47 |
| Msa0623980 | Msa0884300 | -0.803090 | 4.114404e-49 | -8.615850e-47 |
| Msa0623980 | Msa0893840 | 0.811664 | 6.253457e-51 | -8.615850e-47 |
| Msa0623980 | Msa0902340 | 0.847647 | 1.013368e-59 | -8.615850e-47 |
| Msa0623980 | Msa0910830 | 0.875974 | 2.016911e-68 | -8.615850e-47 |
| Msa0623980 | Msa0931370 | 0.801986 | 6.951084e-49 | -8.615850e-47 |
| Msa0623980 | Msa0949550 | -0.818551 | 1.847732e-52 | -8.615850e-47 |
| Msa0623980 | Msa0959850 | 0.801533 | 8.607610e-49 | -8.615850e-47 |
| Msa0623980 | Msa0960090 | 0.858393 | 8.498935e-63 | -8.615850e-47 |
| Msa0623980 | Msa0967820 | 0.802889 | 4.528739e-49 | -8.615850e-47 |
| Msa0623980 | Msa0985700 | 0.855984 | 4.371718e-62 | -8.615850e-47 |
| Msa0623980 | Msa0993450 | 0.806159 | 9.419158e-50 | -8.615850e-47 |
| Msa0623980 | Msa1003110 | 0.852038 | 6.000028e-61 | -8.615850e-47 |
| Msa0623980 | Msa1015560 | 0.804020 | 2.639843e-49 | -8.615850e-47 |
| Msa0623980 | Msa1020540 | 0.831901 | 1.283621e-55 | -8.615850e-47 |
| Msa0623980 | Msa1021620 | 0.856473 | 3.142242e-62 | -8.615850e-47 |
| Msa0623980 | Msa1024350 | 0.820208 | 7.745530e-53 | -8.615850e-47 |
| Msa0623980 | Msa1026050 | 0.814721 | 1.333904e-51 | -8.615850e-47 |
| Msa0623980 | Msa1026710 | 0.808291 | 3.328098e-50 | -8.615850e-47 |
| Msa0623980 | Msa1036590 | 0.838369 | 2.995405e-57 | -8.615850e-47 |
| Msa0623980 | Msa1037350 | 0.803715 | 3.054438e-49 | -8.615850e-47 |
| Msa0623980 | Msa1041630 | 0.811986 | 5.321615e-51 | -8.615850e-47 |
| Msa0623980 | Msa1041650 | 0.803451 | 3.464269e-49 | -8.615850e-47 |
| Msa0623980 | Msa1061670 | 0.835769 | 1.383801e-56 | -8.615850e-47 |
| Msa0623980 | Msa1076830 | 0.832010 | 1.206561e-55 | -8.615850e-47 |
| Msa0623980 | Msa1076900 | 0.844785 | 6.096748e-59 | -8.615850e-47 |
| Msa0623980 | Msa1078300 | 0.811022 | 8.615743e-51 | -8.615850e-47 |
| Msa0623980 | Msa1078600 | -0.804194 | 2.428288e-49 | -8.615850e-47 |
| Msa0623980 | Msa1085560 | 0.815216 | 1.035949e-51 | -8.615850e-47 |
| Msa0623980 | Msa1087380 | 0.826832 | 2.184922e-54 | -8.615850e-47 |
| Msa0623980 | Msa1091000 | 0.822416 | 2.396972e-53 | -8.615850e-47 |
| Msa0623980 | Msa1106960 | 0.832071 | 1.164909e-55 | -8.615850e-47 |
| Msa0623980 | Msa1109880 | 0.834278 | 3.288113e-56 | -8.615850e-47 |
| Msa0623980 | Msa1109890 | 0.856144 | 3.923904e-62 | -8.615850e-47 |
| Msa0623980 | Msa1120680 | 0.802604 | 5.184457e-49 | -8.615850e-47 |
| Msa0623980 | Msa1123010 | 0.808469 | 3.050433e-50 | -8.615850e-47 |
| Msa0623980 | Msa1130770 | 0.813580 | 2.381677e-51 | -8.615850e-47 |
| Msa0623980 | Msa1133860 | 0.848035 | 7.919660e-60 | -8.615850e-47 |
| Msa0623980 | Msa1146980 | 0.804317 | 2.288810e-49 | -8.615850e-47 |
| Msa0623980 | Msa1149020 | 0.832348 | 9.950095e-56 | -8.615850e-47 |
| Msa0623980 | Msa1163670 | 0.809975 | 1.450571e-50 | -8.615850e-47 |
| Msa0623980 | Msa1163710 | 0.818174 | 2.249929e-52 | -8.615850e-47 |
| Msa0623980 | Msa1166530 | 0.821395 | 4.131197e-53 | -8.615850e-47 |
| Msa0623980 | Msa1170320 | 0.849361 | 3.397528e-60 | -8.615850e-47 |
| Msa0623980 | Msa1186260 | 0.800527 | 1.382019e-48 | -8.615850e-47 |
| Msa0623980 | Msa1187900 | 0.832494 | 9.155651e-56 | -8.615850e-47 |
| Msa0623980 | Msa1214960 | 0.858873 | 6.109029e-63 | -8.615850e-47 |
| Msa0623980 | Msa1216600 | 0.802503 | 5.439886e-49 | -8.615850e-47 |
| Msa0623980 | Msa1217890 | 0.809953 | 1.466616e-50 | -8.615850e-47 |
| Msa0623980 | Msa1220720 | 0.808914 | 2.450172e-50 | -8.615850e-47 |
| Msa0623980 | Msa1228600 | -0.800782 | 1.225973e-48 | -8.615850e-47 |
| Msa0623980 | Msa1249410 | -0.801083 | 1.064463e-48 | -8.615850e-47 |
| Msa0623980 | Msa1253270 | 0.805752 | 1.147208e-49 | -8.615850e-47 |
| Msa0623980 | Msa1265570 | 0.808884 | 2.487089e-50 | -8.615850e-47 |
| Msa0623980 | Msa1275220 | 0.801769 | 7.702824e-49 | -8.615850e-47 |
| Msa0623980 | Msa1281130 | 0.810488 | 1.124554e-50 | -8.615850e-47 |
| Msa0623980 | Msa1281370 | 0.800374 | 1.485209e-48 | -8.615850e-47 |
| Msa0623980 | Msa1286420 | 0.840942 | 6.417535e-58 | -8.615850e-47 |
| Msa0623980 | Msa1286950 | -0.807218 | 5.628819e-50 | -8.615850e-47 |
| Msa0623980 | Msa1288970 | -0.814148 | 1.785427e-51 | -8.615850e-47 |
| Msa0623980 | Msa1296870 | 0.810375 | 1.189491e-50 | -8.615850e-47 |
| Msa0623980 | Msa1297220 | -0.800163 | 1.639523e-48 | -8.615850e-47 |
| Msa0623980 | Msa1300610 | 0.806875 | 6.652692e-50 | -8.615850e-47 |
| Msa0623980 | Msa1313720 | 0.808042 | 3.762031e-50 | -8.615850e-47 |
| Msa0623980 | Msa1320530 | 0.803943 | 2.738995e-49 | -8.615850e-47 |
| Msa0623980 | Msa1323030 | 0.837441 | 5.188686e-57 | -8.615850e-47 |
| Msa0623980 | Msa1323120 | 0.815416 | 9.351409e-52 | -8.615850e-47 |
| Msa0623980 | Msa1329740 | 0.802821 | 4.676886e-49 | -8.615850e-47 |
| Msa0623980 | Msa1334670 | 0.807277 | 5.468746e-50 | -8.615850e-47 |
| Msa0623980 | Msa1343450 | -0.811886 | 5.593645e-51 | -8.615850e-47 |
| Msa0623980 | Msa1357490 | 0.838271 | 3.176305e-57 | -8.615850e-47 |
| Msa0623980 | Msa1357750 | 0.800945 | 1.135664e-48 | -8.615850e-47 |
| Msa0623980 | Msa1357860 | 0.840356 | 9.135784e-58 | -8.615850e-47 |
| Msa0623980 | Msa1359620 | -0.801982 | 6.962972e-49 | -8.615850e-47 |
| Msa0623980 | Msa1365230 | 0.811801 | 5.838753e-51 | -8.615850e-47 |
| Msa0623980 | Msa1365850 | 0.808056 | 3.735376e-50 | -8.615850e-47 |
| Msa0623980 | Msa1369180 | -0.809255 | 2.071033e-50 | -8.615850e-47 |
| Msa0623980 | Msa1371800 | 0.816671 | 4.905019e-52 | -8.615850e-47 |
| Msa0623980 | Msa1373560 | 0.835388 | 1.727347e-56 | -8.615850e-47 |
| Msa0623980 | Msa1376070 | 0.846182 | 2.550009e-59 | -8.615850e-47 |
| Msa0623980 | Msa1376310 | 0.815803 | 7.667134e-52 | -8.615850e-47 |
| Msa0623980 | Msa1377460 | 0.853217 | 2.765584e-61 | -8.615850e-47 |
| Msa0623980 | Msa1377520 | 0.832471 | 9.274320e-56 | -8.615850e-47 |
| Msa0623980 | Msa1378400 | 0.840296 | 9.472482e-58 | -8.615850e-47 |
| Msa0623980 | Msa1395050 | 0.800584 | 1.345610e-48 | -8.615850e-47 |
| Msa0623980 | Msa1403700 | -0.801808 | 7.559522e-49 | -8.615850e-47 |
| Msa0623980 | Msa1407670 | 0.863961 | 1.712814e-64 | -8.615850e-47 |
| Msa0623980 | Msa1413020 | 0.825305 | 5.039984e-54 | -8.615850e-47 |
| Msa0623980 | Msa1420020 | 0.812051 | 5.149667e-51 | -8.615850e-47 |
| Msa0623980 | Msa1421120 | 0.829563 | 4.800124e-55 | -8.615850e-47 |
| Msa0623980 | Msa1421130 | 0.811544 | 6.641008e-51 | -8.615850e-47 |
| Msa0623980 | Msa1427600 | -0.815040 | 1.133455e-51 | -8.615850e-47 |
| Msa0623980 | Msa1434700 | 0.818211 | 2.206152e-52 | -8.615850e-47 |
| Msa0623980 | Msa1440400 | 0.814247 | 1.697600e-51 | -8.615850e-47 |
| Msa0623980 | Msa1447900 | 0.810150 | 1.329656e-50 | -8.615850e-47 |
| Msa0623980 | Msa1449770 | 0.859328 | 4.463700e-63 | -8.615850e-47 |
| Msa0623980 | Msa1450780 | -0.816649 | 4.960131e-52 | -8.615850e-47 |
| Msa0623980 | Msa1459610 | 0.841226 | 5.402912e-58 | -8.615850e-47 |
| Msa0128740 | Msa0623980 | 0.802449 | 5.580156e-49 | -8.615850e-47 |
| Msa0131460 | Msa0623980 | 0.819862 | 9.295308e-53 | -8.615850e-47 |
| Msa0132080 | Msa0623980 | -0.801642 | 8.179253e-49 | -8.615850e-47 |
| Msa0140270 | Msa0623980 | 0.823449 | 1.377233e-53 | -8.615850e-47 |
| Msa0143680 | Msa0623980 | 0.843556 | 1.303349e-58 | -8.615850e-47 |
| Msa0143710 | Msa0623980 | 0.857775 | 1.297166e-62 | -8.615850e-47 |
| Msa0143740 | Msa0623980 | 0.845918 | 3.008990e-59 | -8.615850e-47 |
| Msa0143770 | Msa0623980 | 0.846202 | 2.518528e-59 | -8.615850e-47 |
| Msa0143940 | Msa0623980 | 0.805518 | 1.284040e-49 | -8.615850e-47 |
| Msa0144010 | Msa0623980 | 0.806260 | 8.965935e-50 | -8.615850e-47 |
| Msa0147670 | Msa0623980 | 0.815730 | 7.957448e-52 | -8.615850e-47 |
| Msa0147680 | Msa0623980 | 0.857126 | 2.018567e-62 | -8.615850e-47 |
| Msa0150910 | Msa0623980 | 0.824424 | 8.134584e-54 | -8.615850e-47 |
| Msa0163340 | Msa0623980 | 0.812684 | 3.745139e-51 | -8.615850e-47 |
| Msa0177260 | Msa0623980 | 0.809935 | 1.479621e-50 | -8.615850e-47 |
| Msa0186200 | Msa0623980 | 0.804019 | 2.640639e-49 | -8.615850e-47 |
| Msa0190670 | Msa0623980 | 0.815170 | 1.060113e-51 | -8.615850e-47 |
| Msa0190890 | Msa0623980 | 0.803651 | 3.148851e-49 | -8.615850e-47 |
| Msa0208040 | Msa0623980 | -0.805739 | 1.154438e-49 | -8.615850e-47 |
| Msa0209370 | Msa0623980 | -0.806639 | 7.460224e-50 | -8.615850e-47 |
| Msa0210790 | Msa0623980 | 0.840167 | 1.023773e-57 | -8.615850e-47 |
| Msa0210850 | Msa0623980 | 0.839105 | 1.933003e-57 | -8.615850e-47 |
| Msa0216760 | Msa0623980 | 0.812104 | 5.014658e-51 | -8.615850e-47 |
| Msa0219210 | Msa0623980 | 0.817990 | 2.475195e-52 | -8.615850e-47 |
| Msa0219840 | Msa0623980 | 0.809814 | 1.570942e-50 | -8.615850e-47 |
| Msa0223590 | Msa0623980 | 0.802361 | 5.817907e-49 | -8.615850e-47 |
| Msa0223880 | Msa0623980 | 0.831831 | 1.335287e-55 | -8.615850e-47 |
| Msa0227970 | Msa0623980 | -0.803014 | 4.265667e-49 | -8.615850e-47 |
| Msa0235080 | Msa0623980 | 0.826169 | 3.143562e-54 | -8.615850e-47 |
| Msa0238110 | Msa0623980 | 0.805053 | 1.607058e-49 | -8.615850e-47 |
| Msa0367590 | Msa0623980 | -0.802228 | 6.196662e-49 | -8.615850e-47 |
| Msa0374130 | Msa0623980 | 0.823027 | 1.727504e-53 | -8.615850e-47 |
| Msa0391600 | Msa0623980 | 0.823079 | 1.680422e-53 | -8.615850e-47 |
| Msa0393820 | Msa0623980 | 0.824243 | 8.972005e-54 | -8.615850e-47 |
| Msa0414480 | Msa0623980 | 0.815479 | 9.051741e-52 | -8.615850e-47 |
| Msa0430460 | Msa0623980 | 0.816752 | 4.703642e-52 | -8.615850e-47 |
| Msa0434820 | Msa0623980 | -0.802529 | 5.372238e-49 | -8.615850e-47 |
| Msa0444200 | Msa0623980 | 0.813868 | 2.058782e-51 | -8.615850e-47 |
| Msa0469550 | Msa0623980 | 0.815822 | 7.592198e-52 | -8.615850e-47 |
| Msa0478730 | Msa0623980 | -0.801631 | 8.218379e-49 | -8.615850e-47 |
| Msa0244820 | Msa0623980 | -0.803499 | 3.385227e-49 | -8.615850e-47 |
| Msa0251120 | Msa0623980 | 0.839058 | 1.987795e-57 | -8.615850e-47 |
| Msa0258010 | Msa0623980 | 0.801856 | 7.391893e-49 | -8.615850e-47 |
| Msa0259110 | Msa0623980 | 0.809086 | 2.251817e-50 | -8.615850e-47 |
| Msa0260980 | Msa0623980 | 0.804469 | 2.128469e-49 | -8.615850e-47 |
| Msa0265060 | Msa0623980 | 0.832425 | 9.525260e-56 | -8.615850e-47 |
| Msa0278480 | Msa0623980 | 0.833785 | 4.368379e-56 | -8.615850e-47 |
| Msa0278940 | Msa0623980 | 0.809368 | 1.959220e-50 | -8.615850e-47 |
| Msa0295980 | Msa0623980 | 0.807769 | 4.299172e-50 | -8.615850e-47 |
| Msa0298270 | Msa0623980 | 0.816823 | 4.534057e-52 | -8.615850e-47 |
| Msa0300670 | Msa0623980 | -0.807075 | 6.034158e-50 | -8.615850e-47 |
| Msa0304060 | Msa0623980 | -0.802271 | 6.072385e-49 | -8.615850e-47 |
| Msa0327890 | Msa0623980 | 0.815793 | 7.706016e-52 | -8.615850e-47 |
| Msa0328100 | Msa0623980 | 0.809567 | 1.775058e-50 | -8.615850e-47 |
| Msa0336070 | Msa0623980 | 0.805528 | 1.278403e-49 | -8.615850e-47 |
| Msa0336430 | Msa0623980 | 0.803537 | 3.324662e-49 | -8.615850e-47 |
| Msa0336520 | Msa0623980 | 0.817552 | 3.107520e-52 | -8.615850e-47 |
| Msa0340650 | Msa0623980 | 0.833043 | 6.690758e-56 | -8.615850e-47 |
| Msa0349910 | Msa0623980 | 0.805601 | 1.233742e-49 | -8.615850e-47 |
| Msa0349930 | Msa0623980 | 0.809436 | 1.894143e-50 | -8.615850e-47 |
| Msa0363020 | Msa0623980 | 0.801837 | 7.457476e-49 | -8.615850e-47 |
| Msa0491760 | Msa0623980 | 0.829274 | 5.643392e-55 | -8.615850e-47 |
| Msa0491770 | Msa0623980 | 0.818790 | 1.630725e-52 | -8.615850e-47 |
| Msa0515260 | Msa0623980 | 0.819471 | 1.141471e-52 | -8.615850e-47 |
| Msa0522280 | Msa0623980 | 0.802476 | 5.508562e-49 | -8.615850e-47 |
| Msa0522810 | Msa0623980 | -0.810771 | 9.764282e-51 | -8.615850e-47 |
| Msa0526880 | Msa0623980 | 0.806565 | 7.732481e-50 | -8.615850e-47 |
| Msa0528310 | Msa0623980 | 0.808623 | 2.827750e-50 | -8.615850e-47 |
| Msa0530660 | Msa0623980 | 0.823712 | 1.194945e-53 | -8.615850e-47 |
| Msa0535570 | Msa0623980 | 0.811444 | 6.980627e-51 | -8.615850e-47 |
| Msa0538050 | Msa0623980 | -0.801286 | 9.673155e-49 | -8.615850e-47 |
| Msa0538450 | Msa0623980 | 0.801652 | 8.137282e-49 | -8.615850e-47 |
| Msa0548970 | Msa0623980 | 0.818653 | 1.752187e-52 | -8.615850e-47 |
| Msa0549920 | Msa0623980 | 0.826991 | 2.001273e-54 | -8.615850e-47 |
| Msa0549930 | Msa0623980 | 0.834464 | 2.952577e-56 | -8.615850e-47 |
| Msa0566460 | Msa0623980 | 0.834728 | 2.534830e-56 | -8.615850e-47 |
| Msa0566930 | Msa0623980 | 0.801954 | 7.054702e-49 | -8.615850e-47 |
| Msa0575950 | Msa0623980 | 0.807650 | 4.557241e-50 | -8.615850e-47 |
| Msa0577050 | Msa0623980 | -0.811189 | 7.927461e-51 | -8.615850e-47 |
| Msa0584970 | Msa0623980 | 0.845623 | 3.617649e-59 | -8.615850e-47 |
| Msa0585720 | Msa0623980 | -0.803218 | 3.871082e-49 | -8.615850e-47 |
| Msa0587180 | Msa0623980 | 0.826903 | 2.100545e-54 | -8.615850e-47 |
| Msa0588500 | Msa0623980 | 0.805761 | 1.142012e-49 | -8.615850e-47 |
| Msa0602050 | Msa0623980 | 0.839819 | 1.261002e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623980 | MtrunA17_Chr4g0019571 | 97.003 | 367 | 11 | 0 | 1 | 367 | 4 | 370 | 0.0 | 738 |
| Msa0623980 | MtrunA17_Chr4g0019581 | 88.705 | 363 | 41 | 0 | 5 | 367 | 77 | 439 | 0.0 | 682 |
| Msa0623980 | MtrunA17_Chr4g0019601 | 87.738 | 367 | 45 | 0 | 1 | 367 | 4 | 370 | 0.0 | 679 |
| Msa0623980 | MtrunA17_Chr3g0089391 | 80.381 | 367 | 72 | 0 | 1 | 367 | 1 | 367 | 0.0 | 609 |
| Msa0623980 | MtrunA17_Chr1g0149051 | 53.333 | 330 | 152 | 2 | 34 | 361 | 39 | 368 | 1.10e-128 | 374 |
| Msa0623980 | MtrunA17_Chr2g0332541 | 47.904 | 334 | 168 | 2 | 34 | 361 | 28 | 361 | 3.08e-111 | 329 |
| Msa0623980 | MtrunA17_Chr2g0286051 | 43.202 | 331 | 187 | 1 | 34 | 363 | 35 | 365 | 2.69e-96 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623980 | AT3G08030.1 | 67.941 | 340 | 108 | 1 | 29 | 367 | 26 | 365 | 2.38e-176 | 494 |
| Msa0623980 | AT3G08030.2 | 68.731 | 323 | 100 | 1 | 46 | 367 | 1 | 323 | 7.49e-170 | 476 |
| Msa0623980 | AT2G41800.1 | 60.241 | 332 | 131 | 1 | 34 | 364 | 36 | 367 | 1.02e-149 | 427 |
| Msa0623980 | AT2G41810.1 | 57.778 | 360 | 145 | 3 | 11 | 363 | 7 | 366 | 1.73e-149 | 427 |
| Msa0623980 | AT5G25460.1 | 52.500 | 360 | 168 | 2 | 3 | 361 | 4 | 361 | 8.78e-134 | 387 |
| Msa0623980 | AT5G11420.1 | 55.623 | 329 | 145 | 1 | 34 | 361 | 30 | 358 | 2.44e-133 | 385 |
| Msa0623980 | AT4G32460.2 | 54.103 | 329 | 150 | 1 | 34 | 361 | 29 | 357 | 1.46e-131 | 381 |
| Msa0623980 | AT4G32460.1 | 54.103 | 329 | 150 | 1 | 34 | 361 | 29 | 357 | 1.46e-131 | 381 |
| Msa0623980 | AT4G32460.4 | 54.574 | 317 | 143 | 1 | 46 | 361 | 1 | 317 | 4.51e-129 | 373 |
| Msa0623980 | AT4G32460.3 | 54.574 | 317 | 143 | 1 | 46 | 361 | 1 | 317 | 4.51e-129 | 373 |
| Msa0623980 | AT1G80240.1 | 50.456 | 329 | 162 | 1 | 34 | 361 | 32 | 360 | 4.74e-114 | 337 |
| Msa0623980 | AT1G29980.2 | 42.353 | 340 | 186 | 2 | 34 | 363 | 7 | 346 | 2.02e-96 | 291 |
| Msa0623980 | AT1G29980.1 | 42.353 | 340 | 186 | 2 | 34 | 363 | 43 | 382 | 5.88e-96 | 291 |
| Msa0623980 | AT2G34510.1 | 42.262 | 336 | 188 | 2 | 34 | 363 | 43 | 378 | 6.98e-94 | 286 |
| Msa0623980 | AT2G34510.2 | 43.493 | 292 | 159 | 2 | 78 | 363 | 1 | 292 | 1.01e-83 | 257 |
| Msa0623980 | AT5G14150.2 | 27.105 | 380 | 230 | 13 | 9 | 367 | 8 | 361 | 6.16e-31 | 121 |
| Msa0623980 | AT5G14150.1 | 27.105 | 380 | 230 | 13 | 9 | 367 | 8 | 361 | 6.16e-31 | 121 |
Find 107 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGTTGTGTTGAAAAT+AGG | 0.118027 | 4_3:+1829356 | None:intergenic |
| CTTTGAATCAATGAATTTAA+TGG | 0.135571 | 4_3:+1829262 | None:intergenic |
| GCCTATATTTGCAGATAATT+TGG | 0.140639 | 4_3:-1829411 | Msa0623980:intron |
| CTTAAAGTTTACTTTCAAAA+TGG | 0.179788 | 4_3:-1830634 | Msa0623980:intron |
| CCCTACTTGTGGTCCACTTT+TGG | 0.234226 | 4_3:-1830200 | Msa0623980:CDS |
| TTCATATTGTAGACTTTGTT+TGG | 0.283032 | 4_3:+1829155 | None:intergenic |
| CATTTGTTGTGTTGAAAATA+GGG | 0.295242 | 4_3:+1829357 | None:intergenic |
| CATACAAGGATTGATGATAT+TGG | 0.295621 | 4_3:-1828951 | Msa0623980:CDS |
| TCCTTTATGAATCTTGAGTT+TGG | 0.303749 | 4_3:+1830595 | None:intergenic |
| CAATGGTATGCTCTAATATT+AGG | 0.315217 | 4_3:-1830397 | Msa0623980:CDS |
| CAGGTTTGACCTTGATGGTT+TGG | 0.315262 | 4_3:+1830422 | None:intergenic |
| AAAGTTCCTTTCAAATCTTT+AGG | 0.319577 | 4_3:-1829056 | Msa0623980:CDS |
| TATACCGTTGATTTCCCATT+TGG | 0.332185 | 4_3:+1830543 | None:intergenic |
| CTTCTTGAATACCAGGGTTA+TGG | 0.332265 | 4_3:+1830224 | None:intergenic |
| AATGAATTTAATGGCTTTGA+GGG | 0.333087 | 4_3:+1829271 | None:intergenic |
| CTCTAATATTAGGAGCTTCT+AGG | 0.347807 | 4_3:-1830387 | Msa0623980:CDS |
| CAATGGTGATGTTATTGCTT+GGG | 0.353561 | 4_3:-1830284 | Msa0623980:CDS |
| AAGAATTTCCAAGTGCCATT+TGG | 0.355884 | 4_3:-1829242 | Msa0623980:CDS |
| AGGTTTGACCTTGATGGTTT+GGG | 0.356574 | 4_3:+1830423 | None:intergenic |
| TTGACCAGGTTTGACCTTGA+TGG | 0.371778 | 4_3:+1830417 | None:intergenic |
| GACACAAGATCTTGTTGCTT+TGG | 0.386124 | 4_3:+1829320 | None:intergenic |
| TTCCAAGTGCCATTTGGAAA+TGG | 0.398171 | 4_3:-1829236 | Msa0623980:CDS |
| TTAAAGTTTACTTTCAAAAT+GGG | 0.398196 | 4_3:-1830633 | Msa0623980:intron |
| TTGTGTCACCACTCCCTGGC+TGG | 0.399232 | 4_3:-1829304 | Msa0623980:CDS |
| CAAACACTTTATAGCCTCAA+TGG | 0.405480 | 4_3:-1830301 | Msa0623980:CDS |
| GGAGCAGTGGAGCTTGTTGC+AGG | 0.407672 | 4_3:-1829215 | Msa0623980:CDS |
| GCCAAACTCAAGATTCATAA+AGG | 0.409560 | 4_3:-1830596 | Msa0623980:CDS |
| TGTTATTGCTTGGGGATTCA+AGG | 0.409886 | 4_3:-1830275 | Msa0623980:CDS |
| CAATGAATTTAATGGCTTTG+AGG | 0.411192 | 4_3:+1829270 | None:intergenic |
| CTCCATTTCCAAATGGCACT+TGG | 0.418379 | 4_3:+1829234 | None:intergenic |
| ATCTCAGTGCCTCCACAATC+TGG | 0.419190 | 4_3:-1830337 | Msa0623980:CDS |
| ACAATTGGAGATGGAAGAAA+TGG | 0.425275 | 4_3:-1829128 | Msa0623980:CDS |
| ATAAAGGAAACAAGACTCAT+TGG | 0.425904 | 4_3:-1830580 | Msa0623980:CDS |
| TACAATATGAAATTCACAAT+TGG | 0.427534 | 4_3:-1829143 | Msa0623980:CDS |
| GACCTTGATGGTTTGGGAGA+TGG | 0.428706 | 4_3:+1830429 | None:intergenic |
| GGAAACATGCTCTTCCCAAA+TGG | 0.452234 | 4_3:-1830558 | Msa0623980:CDS |
| ACAAGATCTTGTTGCTTTGG+AGG | 0.453040 | 4_3:+1829323 | None:intergenic |
| CCTTTCAAATCTTTAGGAAA+GGG | 0.458801 | 4_3:-1829050 | Msa0623980:CDS |
| AAGAACATGCCTCCTGGTTG+TGG | 0.461289 | 4_3:+1830499 | None:intergenic |
| ATACCGTTGATTTCCCATTT+GGG | 0.468113 | 4_3:+1830544 | None:intergenic |
| GAAACATGCTCTTCCCAAAT+GGG | 0.472359 | 4_3:-1830557 | Msa0623980:CDS |
| TCATTACCTCTTGTCGGCAT+CGG | 0.480847 | 4_3:+1830148 | None:intergenic |
| CATGGTTCATTACCTCTTGT+CGG | 0.488660 | 4_3:+1830142 | None:intergenic |
| GCATGAACTCCATGTGACAC+TGG | 0.490852 | 4_3:+1830475 | None:intergenic |
| TAAAGGAAACAAGACTCATT+GGG | 0.502085 | 4_3:-1830579 | Msa0623980:CDS |
| ATGAAATTCACAATTGGAGA+TGG | 0.505665 | 4_3:-1829137 | Msa0623980:CDS |
| AATGGACCCTCTTCAAAGCC+AGG | 0.508731 | 4_3:+1829380 | None:intergenic |
| TCCTTTCAAATCTTTAGGAA+AGG | 0.509600 | 4_3:-1829051 | Msa0623980:CDS |
| GTAGGGTCTTCTTGAATACC+AGG | 0.510487 | 4_3:+1830217 | None:intergenic |
| AGTGGAGCTTGTTGCAGGTA+GGG | 0.513407 | 4_3:-1829210 | Msa0623980:CDS |
| AGAAGGAGAGTCTAAGCTAC+AGG | 0.514519 | 4_3:+1828888 | None:intergenic |
| TCCACTGCTCCATTTCCAAA+TGG | 0.515434 | 4_3:+1829227 | None:intergenic |
| AAGAAACCCTGGCTTTGAAG+AGG | 0.516304 | 4_3:-1829387 | Msa0623980:CDS |
| CAAACCATCAAGGTCAAACC+TGG | 0.519771 | 4_3:-1830421 | Msa0623980:CDS |
| GGTATAGTAGAATATATCTC+TGG | 0.520276 | 4_3:-1830526 | Msa0623980:CDS |
| TCAATAATCCAGCCAGGGAG+TGG | 0.521095 | 4_3:+1829296 | None:intergenic |
| AGGGATTCAATAATCCAGCC+AGG | 0.524844 | 4_3:+1829290 | None:intergenic |
| ATAGCTCTTTCTATCATACA+AGG | 0.527718 | 4_3:-1828965 | Msa0623980:CDS |
| GATAATTTGGTAAGAAACCC+TGG | 0.527834 | 4_3:-1829398 | Msa0623980:CDS |
| GGAGTTCATGCAGTTAGACT+TGG | 0.527950 | 4_3:-1830463 | Msa0623980:CDS |
| TCAAGGTCAAACCTGGTCAA+TGG | 0.528995 | 4_3:-1830414 | Msa0623980:CDS |
| ATCTCTGGAGGGCCACAACC+AGG | 0.529941 | 4_3:-1830511 | Msa0623980:CDS |
| CCCTTTCCTAAAGATTTGAA+AGG | 0.532370 | 4_3:+1829050 | None:intergenic |
| AATGGTGATGTTATTGCTTG+GGG | 0.532837 | 4_3:-1830283 | Msa0623980:CDS |
| CATTCGCTAATGTTCATCCT+AGG | 0.534344 | 4_3:-1831319 | Msa0623980:CDS |
| GATCTTGTGTCACCACTCCC+TGG | 0.543570 | 4_3:-1829308 | Msa0623980:CDS |
| ACTATAACTTGATCAAGGAC+AGG | 0.546115 | 4_3:+1828915 | None:intergenic |
| TTACCTCTTGTCGGCATCGG+AGG | 0.550666 | 4_3:+1830151 | None:intergenic |
| GTTGTGTTGAAAATAGGGAA+TGG | 0.558649 | 4_3:+1829362 | None:intergenic |
| CTCCATCTCCCAAACCATCA+AGG | 0.560309 | 4_3:-1830431 | Msa0623980:CDS |
| ATAGCAACAGCATCCAAAAG+TGG | 0.564034 | 4_3:+1830187 | None:intergenic |
| GTGATACTATAACTTGATCA+AGG | 0.568071 | 4_3:+1828910 | None:intergenic |
| ACTGGGAAGAACATGCCTCC+TGG | 0.569166 | 4_3:+1830493 | None:intergenic |
| CATGAACTCCATGTGACACT+GGG | 0.571284 | 4_3:+1830476 | None:intergenic |
| ACATTACCTTCTGGTGACCT+AGG | 0.575284 | 4_3:+1831302 | None:intergenic |
| AGGAAAGGGAACATTCAAAA+CGG | 0.577711 | 4_3:-1829036 | Msa0623980:CDS |
| CCAAAAGTGGACCACAAGTA+GGG | 0.578033 | 4_3:+1830200 | None:intergenic |
| ATTAGAGCATACCATTGACC+AGG | 0.578535 | 4_3:+1830403 | None:intergenic |
| TCAATGGTGATGTTATTGCT+TGG | 0.581184 | 4_3:-1830285 | Msa0623980:CDS |
| ATAGTAGAATATATCTCTGG+AGG | 0.589535 | 4_3:-1830523 | Msa0623980:CDS |
| TGTTCTTAGAATTTGTGCAA+TGG | 0.591903 | 4_3:+1829181 | None:intergenic |
| GATGGAAGAAATGGTTGTCA+TGG | 0.592806 | 4_3:-1829119 | Msa0623980:CDS |
| CAGTGGAGCTTGTTGCAGGT+AGG | 0.597409 | 4_3:-1829211 | Msa0623980:CDS |
| AGGCTATAAAGTGTTTGCAA+AGG | 0.598543 | 4_3:+1830307 | None:intergenic |
| CTTGATGGTTTGGGAGATGG+AGG | 0.600334 | 4_3:+1830432 | None:intergenic |
| TATCCTCCGATGCCGACAAG+AGG | 0.603570 | 4_3:-1830154 | Msa0623980:intron |
| ATGGACCCTCTTCAAAGCCA+GGG | 0.606005 | 4_3:+1829381 | None:intergenic |
| AGAAACCCTGGCTTTGAAGA+GGG | 0.606940 | 4_3:-1829386 | Msa0623980:CDS |
| TCCAAAAGTGGACCACAAGT+AGG | 0.607049 | 4_3:+1830199 | None:intergenic |
| AAAGTTACCTTCCATAACCC+TGG | 0.610532 | 4_3:-1830235 | Msa0623980:CDS |
| TTGAATACCAGGGTTATGGA+AGG | 0.611751 | 4_3:+1830228 | None:intergenic |
| GCCATTTGGAAATGGAGCAG+TGG | 0.618905 | 4_3:-1829228 | Msa0623980:CDS |
| TAGTAGAATATATCTCTGGA+GGG | 0.620859 | 4_3:-1830522 | Msa0623980:CDS |
| AAGCAATAACATCACCATTG+AGG | 0.621145 | 4_3:+1830287 | None:intergenic |
| TGGTTGTCATGGATCAATGA+TGG | 0.622229 | 4_3:-1829108 | Msa0623980:CDS |
| ATGTTCTTCCCAGTGTCACA+TGG | 0.627696 | 4_3:-1830484 | Msa0623980:CDS |
| CTTCCCAAATGGGAAATCAA+CGG | 0.640960 | 4_3:-1830547 | Msa0623980:CDS |
| GATGATATTGGATCTATGTG+TGG | 0.643357 | 4_3:-1828939 | Msa0623980:CDS |
| AAAGGAACATCACCAGATTG+TGG | 0.644013 | 4_3:+1830325 | None:intergenic |
| AAATTGCAAAGTATGGCAGA+AGG | 0.646424 | 4_3:+1828871 | None:intergenic |
| CTATAACTTGATCAAGGACA+GGG | 0.647070 | 4_3:+1828916 | None:intergenic |
| GGGATTCAATAATCCAGCCA+GGG | 0.660484 | 4_3:+1829291 | None:intergenic |
| ATTCAAGAAGACCCTACTTG+TGG | 0.663898 | 4_3:-1830211 | Msa0623980:CDS |
| TAGGGTCTTCTTGAATACCA+GGG | 0.668985 | 4_3:+1830218 | None:intergenic |
| GTTCATCCTAGGTCACCAGA+AGG | 0.669313 | 4_3:-1831308 | Msa0623980:intron |
| GGAACATCACCAGATTGTGG+AGG | 0.701281 | 4_3:+1830328 | None:intergenic |
| TCTGGAGGGCCACAACCAGG+AGG | 0.727185 | 4_3:-1830508 | Msa0623980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTCTCAAATTACTAT+TGG | - | chr4_3:1829155-1829174 | Msa0623980:CDS | 15.0% |
| !!! | ATTTTGAAAGTAAACTTTAA+GGG | + | chr4_3:1829627-1829646 | None:intergenic | 15.0% |
| !! | TTAAAGTTTACTTTCAAAAT+GGG | - | chr4_3:1829627-1829646 | Msa0623980:intron | 15.0% |
| !! | AAATATAATATTTCATGTAG+AGG | + | chr4_3:1830298-1830317 | None:intergenic | 15.0% |
| !! | ATAAGTAAAAAAAAATTGGA+GGG | + | chr4_3:1830449-1830468 | None:intergenic | 15.0% |
| !! | AGTGATAAGTAAAAAAAAAT+TGG | + | chr4_3:1830453-1830472 | None:intergenic | 15.0% |
| !!! | AAAAATAATTCAGGTTTAAA+AGG | + | chr4_3:1830651-1830670 | None:intergenic | 15.0% |
| !! | TTTAGTTACAAAAATAATTC+AGG | + | chr4_3:1830660-1830679 | None:intergenic | 15.0% |
| !!! | TAATTCAGTTATTTTTTTGA+GGG | + | chr4_3:1830702-1830721 | None:intergenic | 15.0% |
| !!! | TTAATTCAGTTATTTTTTTG+AGG | + | chr4_3:1830703-1830722 | None:intergenic | 15.0% |
| !!! | CTTAATTACCTTTTTATATA+AGG | - | chr4_3:1830723-1830742 | Msa0623980:intron | 15.0% |
| !!! | ATTAACCTATTTACTTTTTT+TGG | - | chr4_3:1830759-1830778 | Msa0623980:intron | 15.0% |
| !!! | TTAACCTATTTACTTTTTTT+GGG | - | chr4_3:1830760-1830779 | Msa0623980:intron | 15.0% |
| !!! | CTTGATAATTTTTTGAAAAT+TGG | + | chr4_3:1830813-1830832 | None:intergenic | 15.0% |
| !!! | ACGAGAATATTTCTATTTTT+GGG | + | chr4_3:1829476-1829495 | None:intergenic | 20.0% |
| !!! | TACGAGAATATTTCTATTTT+TGG | + | chr4_3:1829477-1829496 | None:intergenic | 20.0% |
| !! | AAAACAAAAAACAGAAAGAT+TGG | + | chr4_3:1829602-1829621 | None:intergenic | 20.0% |
| !!! | CATTTTGAAAGTAAACTTTA+AGG | + | chr4_3:1829628-1829647 | None:intergenic | 20.0% |
| !! | CTTAAAGTTTACTTTCAAAA+TGG | - | chr4_3:1829626-1829645 | Msa0623980:intron | 20.0% |
| !! | GATAAGTAAAAAAAAATTGG+AGG | + | chr4_3:1830450-1830469 | None:intergenic | 20.0% |
| !! | CTTTGAATCAATGAATTTAA+TGG | + | chr4_3:1831001-1831020 | None:intergenic | 20.0% |
| !! | TACAATATGAAATTCACAAT+TGG | - | chr4_3:1831117-1831136 | Msa0623980:intron | 20.0% |
| ! | TATGTCTTGAATATTATGCT+TGG | + | chr4_3:1829363-1829382 | None:intergenic | 25.0% |
| !! | ATCTCATGTGATTTTTCTAA+TGG | - | chr4_3:1829412-1829431 | Msa0623980:intron | 25.0% |
| ! | TAATGTTGAATTGTTGTGAT+TGG | - | chr4_3:1830209-1830228 | Msa0623980:CDS | 25.0% |
| !!! | TTTTTTGAGGGAAATAATTC+AGG | + | chr4_3:1830690-1830709 | None:intergenic | 25.0% |
| ! | TTGTAGCTCCTTATATAAAA+AGG | + | chr4_3:1830734-1830753 | None:intergenic | 25.0% |
| ! | ACTTCCCAAAAAAAGTAAAT+AGG | + | chr4_3:1830767-1830786 | None:intergenic | 25.0% |
| ! | ACCAAATTATCTGCAAATAT+AGG | + | chr4_3:1830853-1830872 | None:intergenic | 25.0% |
| !!! | CATTTGTTGTGTTGAAAATA+GGG | + | chr4_3:1830906-1830925 | None:intergenic | 25.0% |
| !!! | AATGAATTTAATGGCTTTGA+GGG | + | chr4_3:1830992-1831011 | None:intergenic | 25.0% |
| ! | TTCATATTGTAGACTTTGTT+TGG | + | chr4_3:1831108-1831127 | None:intergenic | 25.0% |
| ! | AAAGTTCCTTTCAAATCTTT+AGG | - | chr4_3:1831204-1831223 | Msa0623980:intron | 25.0% |
| CACAAAATCTTCTTTGTTAC+TGG | - | chr4_3:1828992-1829011 | Msa0623980:CDS | 30.0% | |
| GTATACTCTCATTCATGTTT+CGG | - | chr4_3:1829082-1829101 | Msa0623980:CDS | 30.0% | |
| GAATGTAATCAGATTTGTGA+TGG | + | chr4_3:1829128-1829147 | None:intergenic | 30.0% | |
| ! | CCATGATTTTGCTAAACTTA+CGG | + | chr4_3:1829252-1829271 | None:intergenic | 30.0% |
| TAAGTTTAGCAAAATCATGG+TGG | - | chr4_3:1829252-1829271 | Msa0623980:CDS | 30.0% | |
| CTTGAATATTATGCTTGGAT+TGG | + | chr4_3:1829358-1829377 | None:intergenic | 30.0% | |
| ATATTAACAGAATCACCGAA+AGG | + | chr4_3:1829394-1829413 | None:intergenic | 30.0% | |
| !! | TCATGTTAACTTGTGTCTTA+AGG | - | chr4_3:1829435-1829454 | Msa0623980:intron | 30.0% |
| TCCTTTATGAATCTTGAGTT+TGG | + | chr4_3:1829668-1829687 | None:intergenic | 30.0% | |
| ATAAAGGAAACAAGACTCAT+TGG | - | chr4_3:1829680-1829699 | Msa0623980:intron | 30.0% | |
| TAAAGGAAACAAGACTCATT+GGG | - | chr4_3:1829681-1829700 | Msa0623980:intron | 30.0% | |
| GGTATAGTAGAATATATCTC+TGG | - | chr4_3:1829734-1829753 | Msa0623980:intron | 30.0% | |
| ATAGTAGAATATATCTCTGG+AGG | - | chr4_3:1829737-1829756 | Msa0623980:intron | 30.0% | |
| TAGTAGAATATATCTCTGGA+GGG | - | chr4_3:1829738-1829757 | Msa0623980:intron | 30.0% | |
| CAATGGTATGCTCTAATATT+AGG | - | chr4_3:1829863-1829882 | Msa0623980:intron | 30.0% | |
| !! | ACAAGTTGATTTGTTGAGAT+TGG | + | chr4_3:1830186-1830205 | None:intergenic | 30.0% |
| CGAATAGAGTGTATTAACAT+TGG | - | chr4_3:1830359-1830378 | Msa0623980:CDS | 30.0% | |
| AACACTGTTGAAGATTAAGA+TGG | - | chr4_3:1830395-1830414 | Msa0623980:CDS | 30.0% | |
| ACACTGTTGAAGATTAAGAT+GGG | - | chr4_3:1830396-1830415 | Msa0623980:CDS | 30.0% | |
| GCCTATATTTGCAGATAATT+TGG | - | chr4_3:1830849-1830868 | Msa0623980:intron | 30.0% | |
| !! | CCATTTGTTGTGTTGAAAAT+AGG | + | chr4_3:1830907-1830926 | None:intergenic | 30.0% |
| ! | CCTATTTTCAACACAACAAA+TGG | - | chr4_3:1830904-1830923 | Msa0623980:intron | 30.0% |
| ! | CAATGAATTTAATGGCTTTG+AGG | + | chr4_3:1830993-1831012 | None:intergenic | 30.0% |
| TGTTCTTAGAATTTGTGCAA+TGG | + | chr4_3:1831082-1831101 | None:intergenic | 30.0% | |
| ATGAAATTCACAATTGGAGA+TGG | - | chr4_3:1831123-1831142 | Msa0623980:intron | 30.0% | |
| ! | TCCTTTCAAATCTTTAGGAA+AGG | - | chr4_3:1831209-1831228 | Msa0623980:intron | 30.0% |
| ! | CCTTTCAAATCTTTAGGAAA+GGG | - | chr4_3:1831210-1831229 | Msa0623980:intron | 30.0% |
| ATAGCTCTTTCTATCATACA+AGG | - | chr4_3:1831295-1831314 | Msa0623980:intron | 30.0% | |
| ! | CATACAAGGATTGATGATAT+TGG | - | chr4_3:1831309-1831328 | Msa0623980:CDS | 30.0% |
| GTGATACTATAACTTGATCA+AGG | + | chr4_3:1831353-1831372 | None:intergenic | 30.0% | |
| TAGAGTTGAACATTACCTTC+TGG | + | chr4_3:1828970-1828989 | None:intergenic | 35.0% | |
| CCGTAAGTTTAGCAAAATCA+TGG | - | chr4_3:1829249-1829268 | Msa0623980:CDS | 35.0% | |
| !! | ACAGTGAATCATTGTCGTTT+TGG | + | chr4_3:1829316-1829335 | None:intergenic | 35.0% |
| ! | GAATATTATGCTTGGATTGG+AGG | + | chr4_3:1829355-1829374 | None:intergenic | 35.0% |
| AGACATATGTGTGTTCCTTT+CGG | - | chr4_3:1829376-1829395 | Msa0623980:CDS | 35.0% | |
| CAGAAAGATTGGATCAGAAA+AGG | + | chr4_3:1829591-1829610 | None:intergenic | 35.0% | |
| GCCAAACTCAAGATTCATAA+AGG | - | chr4_3:1829664-1829683 | Msa0623980:intron | 35.0% | |
| !! | ATACCGTTGATTTCCCATTT+GGG | + | chr4_3:1829719-1829738 | None:intergenic | 35.0% |
| !! | TATACCGTTGATTTCCCATT+TGG | + | chr4_3:1829720-1829739 | None:intergenic | 35.0% |
| CTCTAATATTAGGAGCTTCT+AGG | - | chr4_3:1829873-1829892 | Msa0623980:intron | 35.0% | |
| ! | AGGCTATAAAGTGTTTGCAA+AGG | + | chr4_3:1829956-1829975 | None:intergenic | 35.0% |
| CAAACACTTTATAGCCTCAA+TGG | - | chr4_3:1829959-1829978 | Msa0623980:intron | 35.0% | |
| AAGCAATAACATCACCATTG+AGG | + | chr4_3:1829976-1829995 | None:intergenic | 35.0% | |
| ! | TCAATGGTGATGTTATTGCT+TGG | - | chr4_3:1829975-1829994 | Msa0623980:intron | 35.0% |
| ! | CAATGGTGATGTTATTGCTT+GGG | - | chr4_3:1829976-1829995 | Msa0623980:intron | 35.0% |
| ! | AATGGTGATGTTATTGCTTG+GGG | - | chr4_3:1829977-1829996 | Msa0623980:intron | 35.0% |
| GATAATTTGGTAAGAAACCC+TGG | - | chr4_3:1830862-1830881 | Msa0623980:intron | 35.0% | |
| GTTGTGTTGAAAATAGGGAA+TGG | + | chr4_3:1830901-1830920 | None:intergenic | 35.0% | |
| ! | AAGAATTTCCAAGTGCCATT+TGG | - | chr4_3:1831018-1831037 | Msa0623980:intron | 35.0% |
| ACAATTGGAGATGGAAGAAA+TGG | - | chr4_3:1831132-1831151 | Msa0623980:intron | 35.0% | |
| CCCTTTCCTAAAGATTTGAA+AGG | + | chr4_3:1831213-1831232 | None:intergenic | 35.0% | |
| AGGAAAGGGAACATTCAAAA+CGG | - | chr4_3:1831224-1831243 | Msa0623980:intron | 35.0% | |
| GATGATATTGGATCTATGTG+TGG | - | chr4_3:1831321-1831340 | Msa0623980:CDS | 35.0% | |
| CTATAACTTGATCAAGGACA+GGG | + | chr4_3:1831347-1831366 | None:intergenic | 35.0% | |
| ACTATAACTTGATCAAGGAC+AGG | + | chr4_3:1831348-1831367 | None:intergenic | 35.0% | |
| CATTCGCTAATGTTCATCCT+AGG | - | chr4_3:1828941-1828960 | Msa0623980:CDS | 40.0% | |
| GAAACATGCTCTTCCCAAAT+GGG | - | chr4_3:1829703-1829722 | Msa0623980:intron | 40.0% | |
| CTTCCCAAATGGGAAATCAA+CGG | - | chr4_3:1829713-1829732 | Msa0623980:intron | 40.0% | |
| ! | AGGTTTGACCTTGATGGTTT+GGG | + | chr4_3:1829840-1829859 | None:intergenic | 40.0% |
| ATTAGAGCATACCATTGACC+AGG | + | chr4_3:1829860-1829879 | None:intergenic | 40.0% | |
| AAAGGAACATCACCAGATTG+TGG | + | chr4_3:1829938-1829957 | None:intergenic | 40.0% | |
| TGTTATTGCTTGGGGATTCA+AGG | - | chr4_3:1829985-1830004 | Msa0623980:intron | 40.0% | |
| AAAGTTACCTTCCATAACCC+TGG | - | chr4_3:1830025-1830044 | Msa0623980:intron | 40.0% | |
| TTGAATACCAGGGTTATGGA+AGG | + | chr4_3:1830035-1830054 | None:intergenic | 40.0% | |
| CTTCTTGAATACCAGGGTTA+TGG | + | chr4_3:1830039-1830058 | None:intergenic | 40.0% | |
| TAGGGTCTTCTTGAATACCA+GGG | + | chr4_3:1830045-1830064 | None:intergenic | 40.0% | |
| ATTCAAGAAGACCCTACTTG+TGG | - | chr4_3:1830049-1830068 | Msa0623980:intron | 40.0% | |
| ATAGCAACAGCATCCAAAAG+TGG | + | chr4_3:1830076-1830095 | None:intergenic | 40.0% | |
| CATGGTTCATTACCTCTTGT+CGG | + | chr4_3:1830121-1830140 | None:intergenic | 40.0% | |
| ATGAACCATGTCCATTTGTC+TGG | - | chr4_3:1830131-1830150 | Msa0623980:intron | 40.0% | |
| AGAATCCAGACAAATGGACA+TGG | + | chr4_3:1830139-1830158 | None:intergenic | 40.0% | |
| ATTCTCTGCAGTCATGCAAA+AGG | - | chr4_3:1830154-1830173 | Msa0623980:intron | 40.0% | |
| !! | ACAAGATCTTGTTGCTTTGG+AGG | + | chr4_3:1830940-1830959 | None:intergenic | 40.0% |
| ! | GACACAAGATCTTGTTGCTT+TGG | + | chr4_3:1830943-1830962 | None:intergenic | 40.0% |
| !! | TTCCAAGTGCCATTTGGAAA+TGG | - | chr4_3:1831024-1831043 | Msa0623980:intron | 40.0% |
| GATGGAAGAAATGGTTGTCA+TGG | - | chr4_3:1831141-1831160 | Msa0623980:intron | 40.0% | |
| TGGTTGTCATGGATCAATGA+TGG | - | chr4_3:1831152-1831171 | Msa0623980:intron | 40.0% | |
| ACATTACCTTCTGGTGACCT+AGG | + | chr4_3:1828961-1828980 | None:intergenic | 45.0% | |
| GGAAACATGCTCTTCCCAAA+TGG | - | chr4_3:1829702-1829721 | Msa0623980:intron | 45.0% | |
| ATGTTCTTCCCAGTGTCACA+TGG | - | chr4_3:1829776-1829795 | Msa0623980:intron | 45.0% | |
| CATGAACTCCATGTGACACT+GGG | + | chr4_3:1829787-1829806 | None:intergenic | 45.0% | |
| GGAGTTCATGCAGTTAGACT+TGG | - | chr4_3:1829797-1829816 | Msa0623980:intron | 45.0% | |
| ! | CAGGTTTGACCTTGATGGTT+TGG | + | chr4_3:1829841-1829860 | None:intergenic | 45.0% |
| CAAACCATCAAGGTCAAACC+TGG | - | chr4_3:1829839-1829858 | Msa0623980:intron | 45.0% | |
| TTGACCAGGTTTGACCTTGA+TGG | + | chr4_3:1829846-1829865 | None:intergenic | 45.0% | |
| TCAAGGTCAAACCTGGTCAA+TGG | - | chr4_3:1829846-1829865 | Msa0623980:intron | 45.0% | |
| GTAGGGTCTTCTTGAATACC+AGG | + | chr4_3:1830046-1830065 | None:intergenic | 45.0% | |
| CCAAAAGTGGACCACAAGTA+GGG | + | chr4_3:1830063-1830082 | None:intergenic | 45.0% | |
| TCCAAAAGTGGACCACAAGT+AGG | + | chr4_3:1830064-1830083 | None:intergenic | 45.0% | |
| TCATTACCTCTTGTCGGCAT+CGG | + | chr4_3:1830115-1830134 | None:intergenic | 45.0% | |
| CTGCAGAGAATCCAGACAAA+TGG | + | chr4_3:1830145-1830164 | None:intergenic | 45.0% | |
| !! | AAGAAACCCTGGCTTTGAAG+AGG | - | chr4_3:1830873-1830892 | Msa0623980:intron | 45.0% |
| !! | AGAAACCCTGGCTTTGAAGA+GGG | - | chr4_3:1830874-1830893 | Msa0623980:intron | 45.0% |
| GGGATTCAATAATCCAGCCA+GGG | + | chr4_3:1830972-1830991 | None:intergenic | 45.0% | |
| AGGGATTCAATAATCCAGCC+AGG | + | chr4_3:1830973-1830992 | None:intergenic | 45.0% | |
| CTCCATTTCCAAATGGCACT+TGG | + | chr4_3:1831029-1831048 | None:intergenic | 45.0% | |
| TCCACTGCTCCATTTCCAAA+TGG | + | chr4_3:1831036-1831055 | None:intergenic | 45.0% | |
| AGAAGGAGAGTCTAAGCTAC+AGG | + | chr4_3:1831375-1831394 | None:intergenic | 45.0% | |
| !! | AATAAAATAATAAACAATTA+AGG | - | chr4_3:1830584-1830603 | Msa0623980:CDS | 5.0% |
| !! | ATAAAATAATAAACAATTAA+GGG | - | chr4_3:1830585-1830604 | Msa0623980:CDS | 5.0% |
| GTTCATCCTAGGTCACCAGA+AGG | - | chr4_3:1828952-1828971 | Msa0623980:CDS | 50.0% | |
| AGACGTGTCAGTGTTGTGTC+TGG | - | chr4_3:1829181-1829200 | Msa0623980:CDS | 50.0% | |
| AAGAACATGCCTCCTGGTTG+TGG | + | chr4_3:1829764-1829783 | None:intergenic | 50.0% | |
| GCATGAACTCCATGTGACAC+TGG | + | chr4_3:1829788-1829807 | None:intergenic | 50.0% | |
| ! | CTTGATGGTTTGGGAGATGG+AGG | + | chr4_3:1829831-1829850 | None:intergenic | 50.0% |
| CTCCATCTCCCAAACCATCA+AGG | - | chr4_3:1829829-1829848 | Msa0623980:intron | 50.0% | |
| ! | GACCTTGATGGTTTGGGAGA+TGG | + | chr4_3:1829834-1829853 | None:intergenic | 50.0% |
| ATCTCAGTGCCTCCACAATC+TGG | - | chr4_3:1829923-1829942 | Msa0623980:intron | 50.0% | |
| GGAACATCACCAGATTGTGG+AGG | + | chr4_3:1829935-1829954 | None:intergenic | 50.0% | |
| ! | CCCTACTTGTGGTCCACTTT+TGG | - | chr4_3:1830060-1830079 | Msa0623980:intron | 50.0% |
| ATGGACCCTCTTCAAAGCCA+GGG | + | chr4_3:1830882-1830901 | None:intergenic | 50.0% | |
| AATGGACCCTCTTCAAAGCC+AGG | + | chr4_3:1830883-1830902 | None:intergenic | 50.0% | |
| TCAATAATCCAGCCAGGGAG+TGG | + | chr4_3:1830967-1830986 | None:intergenic | 50.0% | |
| GCCATTTGGAAATGGAGCAG+TGG | - | chr4_3:1831032-1831051 | Msa0623980:intron | 50.0% | |
| !! | AGTGGAGCTTGTTGCAGGTA+GGG | - | chr4_3:1831050-1831069 | Msa0623980:intron | 50.0% |
| ACTGGGAAGAACATGCCTCC+TGG | + | chr4_3:1829770-1829789 | None:intergenic | 55.0% | |
| TATCCTCCGATGCCGACAAG+AGG | - | chr4_3:1830106-1830125 | Msa0623980:intron | 55.0% | |
| ! | TTACCTCTTGTCGGCATCGG+AGG | + | chr4_3:1830112-1830131 | None:intergenic | 55.0% |
| GATCTTGTGTCACCACTCCC+TGG | - | chr4_3:1830952-1830971 | Msa0623980:intron | 55.0% | |
| !! | CAGTGGAGCTTGTTGCAGGT+AGG | - | chr4_3:1831049-1831068 | Msa0623980:intron | 55.0% |
| ! | ATCTCTGGAGGGCCACAACC+AGG | - | chr4_3:1829749-1829768 | Msa0623980:intron | 60.0% |
| TTGTGTCACCACTCCCTGGC+TGG | - | chr4_3:1830956-1830975 | Msa0623980:intron | 60.0% | |
| !! | GGAGCAGTGGAGCTTGTTGC+AGG | - | chr4_3:1831045-1831064 | Msa0623980:intron | 60.0% |
| TCTGGAGGGCCACAACCAGG+AGG | - | chr4_3:1829752-1829771 | Msa0623980:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 1828886 | 1831396 | 1828886 | ID=Msa0623980;Name=Msa0623980 |
| chr4_3 | mRNA | 1828886 | 1831396 | 1828886 | ID=Msa0623980-mRNA-1;Parent=Msa0623980;Name=Msa0623980-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.33|1|1|1|3|13|367 |
| chr4_3 | exon | 1828886 | 1829419 | 1828886 | ID=Msa0623980-mRNA-1:exon:505;Parent=Msa0623980-mRNA-1 |
| chr4_3 | exon | 1830155 | 1830649 | 1830155 | ID=Msa0623980-mRNA-1:exon:504;Parent=Msa0623980-mRNA-1 |
| chr4_3 | exon | 1831309 | 1831396 | 1831309 | ID=Msa0623980-mRNA-1:exon:503;Parent=Msa0623980-mRNA-1 |
| chr4_3 | CDS | 1831309 | 1831396 | 1831309 | ID=Msa0623980-mRNA-1:cds;Parent=Msa0623980-mRNA-1 |
| chr4_3 | CDS | 1830155 | 1830649 | 1830155 | ID=Msa0623980-mRNA-1:cds;Parent=Msa0623980-mRNA-1 |
| chr4_3 | CDS | 1828899 | 1829419 | 1828899 | ID=Msa0623980-mRNA-1:cds;Parent=Msa0623980-mRNA-1 |
| chr4_3 | three_prime_UTR | 1828886 | 1828898 | 1828886 | ID=Msa0623980-mRNA-1:three_prime_utr;Parent=Msa0623980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
