AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082090 MtrunA17_Chr7g0269521 96.277 564 21 0 1 564 1 564 0.0 1125
Msa1082090 MtrunA17_Chr1g0175661 74.423 563 140 3 1 563 1 559 0.0 860
Msa1082090 MtrunA17_Chr1g0195301 74.336 565 134 4 1 563 1 556 0.0 855
Msa1082090 MtrunA17_Chr1g0195321 74.336 565 134 4 1 563 1 556 0.0 855
Msa1082090 MtrunA17_Chr1g0195331 74.159 565 135 4 1 563 1 556 0.0 852
Msa1082090 MtrunA17_Chr1g0195351 73.628 565 136 5 1 563 1 554 0.0 843
Msa1082090 MtrunA17_Chr7g0269511 67.992 528 161 4 40 563 42 565 0.0 738
Msa1082090 MtrunA17_Chr7g0269531 63.251 566 198 8 1 562 6 565 0.0 712
Msa1082090 MtrunA17_Chr1g0192331 50.449 557 232 8 9 562 13 528 0.0 528
Msa1082090 MtrunA17_Chr8g0354911 50.460 543 241 9 40 562 78 612 1.46e-176 512
Msa1082090 MtrunA17_Chr1g0195311 83.774 265 43 0 299 563 51 315 3.45e-169 482
Msa1082090 MtrunA17_Chr3g0080381 48.244 541 260 7 40 563 92 629 6.43e-169 493
Msa1082090 MtrunA17_Chr7g0269541 44.983 578 258 13 7 562 17 556 3.71e-147 435
Msa1082090 MtrunA17_Chr4g0011771 45.081 559 249 14 13 562 4 513 1.27e-141 419
Msa1082090 MtrunA17_Chr8g0391311 47.335 469 217 8 98 562 99 541 2.09e-132 397
Msa1082090 MtrunA17_Chr4g0011791 44.361 532 238 14 37 562 30 509 3.06e-132 395
Msa1082090 MtrunA17_Chr8g0391291 47.335 469 217 8 98 562 97 539 1.86e-131 394
Msa1082090 MtrunA17_Chr1g0147051 40.415 579 305 12 7 562 46 607 2.81e-129 391
Msa1082090 MtrunA17_Chr8g0345281 41.989 543 276 11 37 562 69 589 6.52e-128 387
Msa1082090 MtrunA17_Chr4g0069881 42.200 500 245 9 65 562 78 535 4.03e-126 380
Msa1082090 MtrunA17_Chr2g0302021 44.703 472 215 8 99 562 92 525 9.89e-126 379
Msa1082090 MtrunA17_Chr4g0069841 43.326 487 234 10 82 564 70 518 5.43e-124 374
Msa1082090 MtrunA17_Chr7g0233831 45.011 471 215 11 99 562 122 555 5.60e-123 373
Msa1082090 MtrunA17_Chr4g0011751 43.067 476 224 8 91 562 57 489 9.32e-123 370
Msa1082090 MtrunA17_Chr7g0233771 44.538 476 210 11 99 562 121 554 3.01e-121 369
Msa1082090 MtrunA17_Chr3g0126771 43.227 502 249 13 79 562 114 597 8.37e-121 369
Msa1082090 MtrunA17_Chr8g0354901 40.596 537 276 13 37 562 77 581 2.74e-120 367
Msa1082090 MtrunA17_Chr7g0233801 40.111 541 266 13 39 562 54 553 3.67e-120 365
Msa1082090 MtrunA17_Chr3g0080391 43.041 467 237 9 96 562 137 574 2.11e-118 362
Msa1082090 MtrunA17_Chr7g0272141 41.165 498 249 11 76 562 78 542 4.91e-118 360
Msa1082090 MtrunA17_Chr4g0018371 41.165 532 272 13 40 562 40 539 1.08e-117 358
Msa1082090 MtrunA17_Chr3g0090091 41.121 535 261 14 40 562 36 528 3.39e-116 354
Msa1082090 MtrunA17_Chr4g0069861 44.444 432 205 7 135 564 121 519 4.24e-116 354
Msa1082090 MtrunA17_Chr3g0079361 51.652 333 154 4 232 562 200 527 1.27e-113 348
Msa1082090 MtrunA17_Chr4g0069891 42.151 465 253 6 98 562 145 593 2.63e-113 349
Msa1082090 MtrunA17_Chr3g0079341 39.964 548 278 12 27 562 19 527 3.31e-113 347
Msa1082090 MtrunA17_Chr3g0079351 40.037 547 279 12 27 562 19 527 4.38e-113 347
Msa1082090 MtrunA17_Chr8g0345211 37.112 547 273 14 37 558 78 578 2.17e-105 328
Msa1082090 MtrunA17_Chr1g0194091 38.259 494 275 11 81 562 94 569 1.84e-103 323
Msa1082090 MtrunA17_Chr2g0302001 56.274 263 112 1 300 562 178 437 1.49e-102 316
Msa1082090 MtrunA17_Chr1g0194081 35.728 529 319 6 39 562 51 563 3.20e-102 320
Msa1082090 MtrunA17_Chr8g0384121 36.248 549 310 13 24 561 44 563 3.61e-100 315
Msa1082090 MtrunA17_Chr7g0270691 34.031 573 345 11 1 563 1 550 1.05e-98 310
Msa1082090 MtrunA17_Chr7g0272151 34.743 544 315 12 37 561 60 582 6.02e-97 306
Msa1082090 MtrunA17_Chr2g0301931 51.418 282 133 2 281 562 15 292 3.99e-95 292
Msa1082090 MtrunA17_Chr1g0192311 44.512 328 177 2 234 558 241 566 1.62e-94 300
Msa1082090 MtrunA17_Chr1g0192281 44.512 328 177 2 234 558 241 566 1.62e-94 300
Msa1082090 MtrunA17_Chr1g0192321 38.902 437 245 8 136 561 157 582 1.44e-93 298
Msa1082090 MtrunA17_Chr4g0000121 43.598 328 180 2 234 558 228 553 5.25e-93 296
Msa1082090 MtrunA17_Chr3g0129921 33.880 549 305 12 37 561 49 563 1.79e-92 294
Msa1082090 MtrunA17_Chr7g0234711 59.111 225 90 2 340 562 45 269 2.20e-91 281
Msa1082090 MtrunA17_Chr1g0192301 42.857 329 183 2 234 559 246 572 9.02e-91 290
Msa1082090 MtrunA17_Chr7g0270661 37.342 474 278 7 96 562 105 566 3.51e-90 288
Msa1082090 MtrunA17_Chr7g0270671 37.342 474 278 7 96 562 105 566 3.51e-90 288
Msa1082090 MtrunA17_Chr7g0270651 36.383 470 282 5 99 562 108 566 1.02e-89 287
Msa1082090 MtrunA17_Chr7g0270631 36.617 467 289 3 99 564 96 556 1.84e-86 290
Msa1082090 MtrunA17_Chr7g0270631 34.647 482 286 10 99 562 644 1114 4.10e-72 250
Msa1082090 MtrunA17_Chr2g0295531 33.159 573 321 15 4 558 14 542 1.56e-85 277
Msa1082090 MtrunA17_Chr4g0067601 35.469 437 250 8 135 561 157 571 2.33e-83 271
Msa1082090 MtrunA17_Chr4g0067611 35.469 437 250 8 135 561 157 571 2.94e-83 271
Msa1082090 MtrunA17_Chr5g0437831 42.262 336 177 7 234 562 58 383 4.58e-82 261
Msa1082090 MtrunA17_Chr2g0295551 36.073 438 241 8 135 561 154 563 6.93e-80 261
Msa1082090 MtrunA17_Chr8g0380581 40.673 327 184 5 234 558 54 372 4.27e-79 253
Msa1082090 MtrunA17_Chr2g0334111 41.270 315 167 6 250 562 25 323 4.48e-73 236
Msa1082090 MtrunA17_Chr7g0268241 41.905 315 167 7 250 562 50 350 1.10e-71 233
Msa1082090 MtrunA17_Chr2g0295541 32.613 463 254 7 135 561 154 594 9.69e-71 238
Msa1082090 MtrunA17_Chr7g0271381 29.228 544 317 14 38 562 62 556 4.07e-67 227
Msa1082090 MtrunA17_Chr1g0194311 36.656 311 168 8 252 551 76 368 4.02e-55 190
Msa1082090 MtrunA17_Chr6g0487101 38.033 305 161 7 258 551 93 380 1.12e-53 187
Msa1082090 MtrunA17_Chr7g0258341 34.295 312 181 6 250 551 90 387 1.20e-52 184
Msa1082090 MtrunA17_Chr6g0453551 33.648 318 182 8 249 553 5 306 2.05e-52 181
Msa1082090 MtrunA17_Chr8g0389771 36.306 314 170 8 251 551 81 377 3.96e-51 180
Msa1082090 MtrunA17_Chr6g0466951 36.655 281 152 6 250 525 69 328 6.89e-50 176
Msa1082090 MtrunA17_Chr7g0217941 33.648 318 182 9 249 553 5 306 7.68e-50 174
Msa1082090 MtrunA17_Chr6g0466961 37.011 281 151 6 250 525 40 299 1.43e-49 174
Msa1082090 MtrunA17_Chr8g0391261 56.934 137 58 1 427 562 30 166 1.20e-48 166
Msa1082090 MtrunA17_Chr1g0161731 33.333 315 183 7 245 551 44 339 2.83e-45 163
Msa1082090 MtrunA17_Chr2g0294321 31.677 322 191 8 240 552 46 347 2.93e-43 157
Msa1082090 MtrunA17_Chr5g0446301 33.657 309 174 8 256 551 67 357 3.09e-43 158
Msa1082090 MtrunA17_Chr4g0070051 30.655 336 195 12 230 551 32 343 1.03e-41 153
Msa1082090 MtrunA17_Chr7g0265201 29.619 341 202 8 227 551 67 385 1.33e-40 151
Msa1082090 MtrunA17_Chr5g0399221 30.000 320 195 7 247 554 60 362 5.15e-40 149
Msa1082090 MtrunA17_Chr2g0295851 30.841 321 182 11 242 552 47 337 1.38e-37 142
Msa1082090 MtrunA17_Chr5g0440871 32.573 307 183 7 246 551 35 318 4.72e-36 137
Msa1082090 MtrunA17_Chr2g0299431 36.885 244 122 8 234 464 40 264 6.55e-33 127
Msa1082090 MtrunA17_Chr8g0351871 30.380 316 184 9 248 551 31 322 5.12e-32 126
Msa1082090 MtrunA17_Chr4g0037751 29.841 315 190 9 247 551 68 361 1.73e-31 125
Msa1082090 MtrunA17_Chr5g0437821 41.912 136 76 2 366 499 4 138 3.00e-31 118
Msa1082090 MtrunA17_Chr5g0420831 30.460 348 202 12 222 551 36 361 2.94e-30 122
Msa1082090 MtrunA17_Chr4g0025841 31.873 251 151 5 246 496 33 263 9.84e-29 115
Msa1082090 MtrunA17_Chr6g0459781 37.288 177 94 7 249 414 12 182 1.32e-26 107
Msa1082090 MtrunA17_Chr7g0265161 32.778 180 88 4 319 493 6 157 4.74e-23 98.2
Msa1082090 MtrunA17_Chr5g0440901 35.526 152 88 2 345 496 1 142 5.38e-22 92.4
Msa1082090 MtrunA17_Chr5g0440891 38.650 163 88 5 246 407 44 195 4.67e-21 91.7
Msa1082090 MtrunA17_Chr2g0314691 30.806 211 134 5 341 551 3 201 3.81e-20 89.0
Msa1082090 MtrunA17_Chr6g0459791 41.129 124 61 3 429 551 4 116 4.07e-20 86.3
Msa1082090 MtrunA17_Chr6g0460141 39.370 127 69 4 289 407 13 139 4.43e-18 81.6
Msa1082090 MtrunA17_Chr8g0391281 36.041 197 107 7 141 334 130 310 1.64e-17 83.6
Msa1082090 MtrunA17_Chr4g0073911 30.488 164 104 4 280 436 35 195 3.32e-14 72.8
Msa1082090 MtrunA17_Chr7g0234731 38.614 101 57 2 232 332 219 314 2.26e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082090 AT4G02330.1 60.174 575 200 12 8 563 8 572 0.0 673
Msa1082090 AT1G02810.1 57.487 581 216 10 6 563 6 578 0.0 652
Msa1082090 AT2G47550.1 56.383 564 226 8 11 563 5 559 0.0 627
Msa1082090 AT3G10720.2 48.609 539 257 8 40 563 83 616 9.01e-174 506
Msa1082090 AT5G04970.1 46.337 546 259 9 40 563 88 621 1.00e-162 478
Msa1082090 AT2G45220.1 42.049 566 268 12 1 562 2 511 3.78e-133 398
Msa1082090 AT5G51490.1 42.370 557 258 15 24 562 25 536 1.11e-130 392
Msa1082090 AT3G60730.1 44.977 438 218 7 134 562 96 519 8.56e-128 384
Msa1082090 AT1G11580.1 48.706 425 186 6 137 558 158 553 2.13e-127 385
Msa1082090 AT1G11580.2 48.706 425 186 6 137 558 179 574 2.87e-127 385
Msa1082090 AT2G26440.1 43.178 535 268 11 38 562 39 547 4.37e-127 384
Msa1082090 AT3G43270.1 44.262 488 241 10 82 563 64 526 4.26e-126 380
Msa1082090 AT1G53830.1 41.667 552 285 9 25 558 51 583 1.30e-125 381
Msa1082090 AT3G10720.1 63.462 260 95 0 304 563 1 260 5.63e-125 368
Msa1082090 AT1G23200.1 40.587 579 278 15 8 562 18 554 7.37e-125 378
Msa1082090 AT4G33220.1 45.062 486 219 10 99 564 68 525 3.03e-124 375
Msa1082090 AT3G05620.1 45.370 432 200 5 131 562 146 541 7.84e-123 372
Msa1082090 AT3G14310.1 40.580 552 303 9 27 562 50 592 1.60e-122 373
Msa1082090 AT5G53370.1 44.937 474 225 11 98 562 139 585 8.43e-122 371
Msa1082090 AT5G51500.1 41.230 553 269 15 26 562 28 540 1.20e-121 369
Msa1082090 AT5G53370.2 44.915 472 228 11 98 562 175 621 2.96e-121 371
Msa1082090 AT3G49220.1 41.367 556 266 14 32 564 80 598 8.86e-121 369
Msa1082090 AT3G49220.3 41.367 556 266 14 32 564 125 643 3.36e-120 369
Msa1082090 AT4G33220.2 51.791 363 159 4 203 564 57 404 9.27e-120 360
Msa1082090 AT5G04960.1 38.869 548 279 15 30 558 50 560 1.07e-118 362
Msa1082090 AT2G26450.1 39.179 536 282 13 37 562 110 611 7.68e-117 359
Msa1082090 AT4G02300.1 39.643 560 292 13 6 562 16 532 1.70e-116 356
Msa1082090 AT3G10710.1 39.518 539 281 15 29 562 63 561 3.96e-115 353
Msa1082090 AT3G59010.1 43.149 489 230 12 79 563 85 529 1.61e-114 350
Msa1082090 AT4G00190.1 38.679 530 249 14 39 558 7 470 9.80e-114 347
Msa1082090 AT4G02320.1 41.949 472 246 9 90 558 68 514 1.42e-113 348
Msa1082090 AT2G43050.1 41.616 495 234 12 72 563 75 517 2.05e-111 342
Msa1082090 AT1G53840.1 41.189 471 239 11 98 556 137 581 3.93e-111 343
Msa1082090 AT4G33230.1 36.940 536 303 12 37 562 96 606 5.09e-108 336
Msa1082090 AT3G47400.1 41.667 468 244 6 98 562 153 594 1.27e-106 332
Msa1082090 AT3G05610.1 38.462 468 262 6 99 563 122 566 1.45e-106 334
Msa1082090 AT5G27870.1 38.479 434 233 8 135 562 157 562 1.52e-102 326
Msa1082090 AT5G20860.2 35.436 539 299 11 37 562 36 538 1.92e-100 315
Msa1082090 AT3G06830.1 40.698 430 235 8 134 558 150 564 4.05e-100 315
Msa1082090 AT5G49180.1 39.860 429 238 7 134 559 156 567 1.07e-97 308
Msa1082090 AT3G27980.1 40.515 427 218 5 137 562 106 497 2.83e-97 305
Msa1082090 AT3G14300.1 42.317 423 213 9 135 553 565 960 2.92e-97 317
Msa1082090 AT4G03930.1 41.435 432 217 9 134 562 126 524 1.01e-96 304
Msa1082090 AT1G11590.1 40.603 431 222 6 134 562 126 524 5.78e-96 302
Msa1082090 AT5G09760.2 47.134 314 153 6 246 550 263 572 2.99e-90 289
Msa1082090 AT5G09760.1 47.134 314 153 6 246 550 237 546 3.91e-90 288
Msa1082090 AT1G11370.1 50.388 258 125 1 236 493 32 286 4.08e-88 274
Msa1082090 AT4G15980.1 42.988 328 183 2 232 558 374 698 2.49e-85 280
Msa1082090 AT4G15980.2 42.988 328 183 2 232 558 384 708 4.18e-85 279
Msa1082090 AT5G64640.1 44.753 324 159 7 246 555 285 602 6.17e-82 268
Msa1082090 AT5G20860.1 31.827 531 273 12 37 548 36 496 5.65e-77 253
Msa1082090 AT2G47030.1 41.587 315 177 4 251 562 278 588 6.23e-74 246
Msa1082090 AT2G47040.1 31.625 566 335 14 37 562 42 595 9.89e-73 243
Msa1082090 AT3G62170.1 40.952 315 179 4 251 562 278 588 2.33e-70 237
Msa1082090 AT5G19730.1 35.987 314 173 7 249 551 85 381 7.23e-53 185
Msa1082090 AT1G05310.1 35.577 312 177 6 250 551 91 388 2.46e-52 184
Msa1082090 AT2G36710.1 34.000 350 195 8 214 556 70 390 2.94e-52 184
Msa1082090 AT3G17060.1 30.141 355 217 8 209 552 3 337 9.22e-51 178
Msa1082090 AT2G19150.1 32.822 326 189 8 243 558 34 339 2.01e-49 174
Msa1082090 AT3G29090.1 33.230 322 184 9 244 551 1 305 5.45e-49 172
Msa1082090 AT2G21610.1 33.333 303 182 6 249 551 50 332 7.49e-49 173
Msa1082090 AT2G21610.2 33.333 303 182 6 249 551 55 337 1.13e-48 173
Msa1082090 AT2G36700.1 31.494 308 191 5 249 551 41 333 1.30e-46 167
Msa1082090 AT5G18990.1 34.824 313 175 7 250 551 29 323 1.35e-46 166
Msa1082090 AT3G24130.1 35.417 288 159 6 250 526 34 305 1.18e-43 159
Msa1082090 AT5G55590.1 32.390 318 186 8 246 551 78 378 2.20e-42 156
Msa1082090 AT5G07430.1 32.710 321 191 8 239 551 52 355 5.28e-42 155
Msa1082090 AT5G26810.1 32.727 330 192 10 237 551 19 333 1.12e-41 153
Msa1082090 AT5G47500.1 30.696 316 190 7 248 551 59 357 4.65e-40 149
Msa1082090 AT2G47280.1 31.329 316 188 8 246 551 31 327 6.31e-40 148
Msa1082090 AT2G19150.2 34.091 264 146 7 243 496 34 279 6.47e-40 147
Msa1082090 AT5G55590.2 33.840 263 147 7 246 496 78 325 1.44e-39 147
Msa1082090 AT5G07420.1 31.776 321 194 8 239 551 52 355 3.81e-38 144
Msa1082090 AT5G61680.1 33.119 311 182 10 248 551 67 358 2.30e-37 142
Msa1082090 AT1G44980.1 40.984 183 105 1 234 416 62 241 8.72e-35 132
Msa1082090 AT1G69940.1 28.483 323 204 10 238 551 51 355 4.23e-34 133
Msa1082090 AT5G07410.1 28.829 333 208 11 230 551 41 355 4.40e-34 133

Find 96 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACAGTTGACTTCATATT+TGG 0.153800 7_2:-82053980 Msa1082090:CDS
CTACTAGCAACCGTGTTATT+TGG 0.232079 7_2:+82055790 None:intergenic
TTCTCTTTCACTTTCCATCT+TGG 0.275523 7_2:-82056562 Msa1082090:CDS
AACCAACAAACTTGTTTAGA+TGG 0.297504 7_2:-82056165 Msa1082090:CDS
TATCGCGAATGCGACATCTA+TGG 0.300622 7_2:-82054001 Msa1082090:CDS
GTACTCAAGGACAGTTTATA+TGG 0.300695 7_2:-82053753 Msa1082090:CDS
CAAACATCATGGCCACAAAA+TGG 0.321805 7_2:-82056015 Msa1082090:CDS
TATAAAAGCTAGTGATGATT+TGG 0.325850 7_2:-82053825 Msa1082090:CDS
AAATTCTTCACCTTGAGAAA+TGG 0.336161 7_2:+82056215 None:intergenic
ATCCTTCTGGTTGGCGTGAA+TGG 0.350213 7_2:-82053706 Msa1082090:CDS
GACAGTTTGATAAATCCTTC+TGG 0.365166 7_2:-82053719 Msa1082090:CDS
AGTCAATTACGGTGCCGTTT+TGG 0.368845 7_2:+82056436 None:intergenic
AGTTTAAGAATTTGCGGGAT+TGG 0.369826 7_2:+82056382 None:intergenic
TTGTCCACTGCTGGGAAGTC+GGG 0.371249 7_2:+82053919 None:intergenic
GTTTAAGAATTTGCGGGATT+GGG 0.373531 7_2:+82056383 None:intergenic
TAAAATTTCCACTTCCATCT+TGG 0.392759 7_2:+82055842 None:intergenic
GAATTTGCGGGATTGGGATA+AGG 0.395401 7_2:+82056389 None:intergenic
AATTCTTCACCTTGAGAAAT+GGG 0.399331 7_2:+82056216 None:intergenic
TTCGAAGCTGCAGCTGTAGA+AGG 0.400981 7_2:+82054066 None:intergenic
AACCATCTAAACAAGTTTGT+TGG 0.402908 7_2:+82056163 None:intergenic
AGCGTTGAATTGTCCACTGC+TGG 0.412036 7_2:+82053910 None:intergenic
AGAAAAGTAGAGTGTAAGAA+TGG 0.416903 7_2:+82056581 None:intergenic
ATCCCTAGCTGATAATTCTA+AGG 0.417042 7_2:-82056523 Msa1082090:CDS
GGTGATCATAATGTTATTGA+TGG 0.424519 7_2:-82055652 Msa1082090:CDS
TGGTTTAATTACCGCATCTT+CGG 0.427646 7_2:-82056145 Msa1082090:CDS
TACTAAGTTTAAGAATTTGC+GGG 0.431023 7_2:+82056377 None:intergenic
CGTTTCTTACCGCGACTGCT+TGG 0.433166 7_2:+82054104 None:intergenic
ATACTAGTATGAGAGTGAAT+TGG 0.446368 7_2:-82053619 Msa1082090:CDS
ACGTTCAATTCAGCAACATT+TGG 0.449707 7_2:-82055622 Msa1082090:intron
AACAATTGATGAAAGTGTTA+CGG 0.454527 7_2:-82055887 Msa1082090:CDS
GATGATTTGGCTCCGTTGAT+TGG 0.458849 7_2:-82053812 Msa1082090:CDS
AACGGCACCGTAATTGACTA+TGG 0.463464 7_2:-82056432 Msa1082090:CDS
CTGGTTGGCGTGAATGGAGT+GGG 0.466052 7_2:-82053700 Msa1082090:CDS
GTACTAAGTTTAAGAATTTG+CGG 0.468291 7_2:+82056376 None:intergenic
TCTTTAAGAGCGGAAATTGT+GGG 0.468747 7_2:+82056318 None:intergenic
GCGACTGCTTGGTGTTTGCT+TGG 0.470992 7_2:+82054115 None:intergenic
GTCCTTGAGTACTCTTTCCA+TGG 0.481294 7_2:+82053764 None:intergenic
GATAGTTGGTTGCCTCAAAC+TGG 0.484973 7_2:-82053530 Msa1082090:CDS
ATAACATTTCGCAACACGGC+TGG 0.488240 7_2:-82054139 Msa1082090:CDS
ATTGTGATTGTTAACCAAGA+TGG 0.492084 7_2:-82055856 Msa1082090:CDS
AAAACGACCATAGTCAATTA+CGG 0.493823 7_2:+82056425 None:intergenic
TTATCAGCTAGGGATGATAA+TGG 0.495429 7_2:+82056531 None:intergenic
TACGCAGAGTATAATAATAC+AGG 0.496159 7_2:-82053653 Msa1082090:CDS
CTTGCAGCTGTGGTTGCACA+AGG 0.496740 7_2:-82054178 Msa1082090:intron
ACTCTACTTGCTAACCAAAA+CGG 0.505690 7_2:-82056450 Msa1082090:CDS
ATCTTTAAGAGCGGAAATTG+TGG 0.509483 7_2:+82056317 None:intergenic
AAGAAGTACTTGATGATGGT+TGG 0.510321 7_2:-82055703 Msa1082090:CDS
CAAGCAGTCGCGGTAAGAAA+CGG 0.512615 7_2:-82054103 Msa1082090:CDS
TACCGCATCTTCGGATCAAA+CGG 0.513345 7_2:-82056136 Msa1082090:CDS
ACTTGATGATGGTTGGAGAT+GGG 0.527173 7_2:-82055696 Msa1082090:CDS
TACTTGATGATGGTTGGAGA+TGG 0.529077 7_2:-82055697 Msa1082090:CDS
AATGTTCTTCCCATTTCTCA+AGG 0.529646 7_2:-82056225 Msa1082090:CDS
GACTCGCAGATTGTTTGTCG+TGG 0.531735 7_2:+82056498 None:intergenic
TTCTACAGCTGCAGCTTCGA+AGG 0.532295 7_2:-82054064 Msa1082090:CDS
AGTATGAGAGTGAATTGGAT+TGG 0.532578 7_2:-82053614 Msa1082090:CDS
ACTATGAATCTTTGTATCAT+CGG 0.534932 7_2:+82056086 None:intergenic
AAACAAGAAGTACTTGATGA+TGG 0.536365 7_2:-82055707 Msa1082090:CDS
ATTGTCCACTGCTGGGAAGT+CGG 0.542110 7_2:+82053918 None:intergenic
TAACATAACATTTCGCAACA+CGG 0.542157 7_2:-82054143 Msa1082090:CDS
ATTAATCGAACGATTATCAC+TGG 0.547300 7_2:-82055673 Msa1082090:CDS
AAGTATGAAACACCAGTTTG+AGG 0.552647 7_2:+82053518 None:intergenic
GAGTATAATAATACAGGACT+TGG 0.553401 7_2:-82053647 Msa1082090:CDS
AAACATACCTTGGTAGGCCA+TGG 0.553572 7_2:-82053781 Msa1082090:CDS
CAGTGAAAACATACCTTGGT+AGG 0.555300 7_2:-82053787 Msa1082090:CDS
TGTTAAAACAGCACTGAGCA+AGG 0.559133 7_2:+82056188 None:intergenic
GGCCATGGAAAGAGTACTCA+AGG 0.561755 7_2:-82053766 Msa1082090:CDS
GTTTGATAAATCCTTCTGGT+TGG 0.562814 7_2:-82053715 Msa1082090:CDS
GGTTGCACAAGGGTTCTTAG+CGG 0.564354 7_2:-82054167 Msa1082090:CDS
ATTGTTAACCAAGATGGAAG+TGG 0.567528 7_2:-82055850 Msa1082090:CDS
TTCGCGATAAAATTGTCTCA+TGG 0.571446 7_2:+82054015 None:intergenic
TCTGGTTGGCGTGAATGGAG+TGG 0.573202 7_2:-82053701 Msa1082090:CDS
ACTGGTGTTTCATACTTGAG+TGG 0.576700 7_2:-82053512 Msa1082090:CDS
TAATGGTAATGATGCCAAGA+TGG 0.577952 7_2:+82056548 None:intergenic
GGACCTTAGAATTATCAGCT+AGG 0.579500 7_2:+82056520 None:intergenic
ACTCGCAGATTGTTTGTCGT+GGG 0.583474 7_2:+82056499 None:intergenic
GCGTTGAATTGTCCACTGCT+GGG 0.593272 7_2:+82053911 None:intergenic
GACCTTAGAATTATCAGCTA+GGG 0.594297 7_2:+82056521 None:intergenic
TGTCCACTGCTGGGAAGTCG+GGG 0.596925 7_2:+82053920 None:intergenic
TGGATCTGTTCGGCCTTGAG+CGG 0.598244 7_2:+82053883 None:intergenic
AATAACACGGTTGCTAGTAG+TGG 0.598741 7_2:-82055787 Msa1082090:CDS
TATCCCCGACTTCCCAGCAG+TGG 0.603880 7_2:-82053923 Msa1082090:CDS
CTCCATTCACGCCAACCAGA+AGG 0.609653 7_2:+82053704 None:intergenic
TTCAACGCTATAACCGCTCA+AGG 0.613112 7_2:-82053896 Msa1082090:CDS
TCGTTTACCGTTGAAAATGT+CGG 0.618815 7_2:-82055968 Msa1082090:CDS
CACCGTTTGATCCGAAGATG+CGG 0.621833 7_2:+82056134 None:intergenic
GGTACAGTGAAAACATACCT+TGG 0.633037 7_2:-82053791 Msa1082090:CDS
GAAGCTGCAGCTGTAGAAGG+TGG 0.633472 7_2:+82054069 None:intergenic
GATTCAGCTAGAAATCGTCA+TGG 0.643888 7_2:-82055925 Msa1082090:CDS
ACTCTTTCCATGGCCTACCA+AGG 0.644437 7_2:+82053774 None:intergenic
ATTCAGCTAGAAATCGTCAT+GGG 0.648742 7_2:-82055924 Msa1082090:CDS
AAGCAAACACCAAGCAGTCG+CGG 0.652116 7_2:-82054113 Msa1082090:CDS
TGGTTGGCGTGAATGGAGTG+GGG 0.656793 7_2:-82053699 Msa1082090:CDS
GAATTGGCAATCTTTAAGAG+CGG 0.665131 7_2:+82056308 None:intergenic
TTGCAGCTGTGGTTGCACAA+GGG 0.674966 7_2:-82054177 Msa1082090:intron
ACAGATCCAAATCAAAACAC+AGG 0.676474 7_2:-82053869 Msa1082090:CDS
AAACGTTGCACCAAATAACA+CGG 0.679707 7_2:-82055800 Msa1082090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTTTTTATAATA+AGG + chr7_2:82055070-82055089 None:intergenic 0.0%
!!! AATTTTTTTTCCTTATAATA+CGG + chr7_2:82055032-82055051 None:intergenic 10.0%
!!! CAAATAAACATTTTTTTTTA+TGG - chr7_2:82055450-82055469 Msa1082090:intron 10.0%
!!! TTTAGTAAGTTTTTTTTATA+AGG - chr7_2:82055628-82055647 Msa1082090:CDS 10.0%
!!! TTAGTAAGTTTTTTTTATAA+GGG - chr7_2:82055629-82055648 Msa1082090:CDS 10.0%
!! AATATAAACAAATAGTGTTT+GGG + chr7_2:82054662-82054681 None:intergenic 15.0%
!! AAATATAAACAAATAGTGTT+TGG + chr7_2:82054663-82054682 None:intergenic 15.0%
!! TTAATTTATCACATGTATTT+AGG - chr7_2:82054943-82054962 Msa1082090:intron 15.0%
!! GTATTATAAGGAAAAAAAAT+TGG - chr7_2:82055031-82055050 Msa1082090:intron 15.0%
!!! TTTTTTTTATAAGGGATATT+TGG - chr7_2:82055637-82055656 Msa1082090:CDS 15.0%
!!! AAGCAAAATATTTGTTAATG+AGG - chr7_2:82054501-82054520 Msa1082090:intron 20.0%
!! AAACATAAATGTATAGTGTT+TGG - chr7_2:82054541-82054560 Msa1082090:intron 20.0%
!! GAGTATAACTAAATTAACAA+AGG + chr7_2:82054705-82054724 None:intergenic 20.0%
!! TAATTCATGTTTAAGTAAAG+TGG + chr7_2:82054897-82054916 None:intergenic 20.0%
!!! TCATGTATTTTATTTCTTGA+GGG + chr7_2:82055008-82055027 None:intergenic 20.0%
!!! TTCATGTATTTTATTTCTTG+AGG + chr7_2:82055009-82055028 None:intergenic 20.0%
!! TATTAAAAATATACTCACTC+TGG + chr7_2:82055525-82055544 None:intergenic 20.0%
!!! ATGCATACAACTTTTTTTAT+TGG - chr7_2:82055666-82055685 Msa1082090:CDS 20.0%
!! TAAAGAAAATGACTTATGAA+TGG + chr7_2:82055735-82055754 None:intergenic 20.0%
!!! GATTAAGTGTGATTTTATAA+AGG + chr7_2:82055760-82055779 None:intergenic 20.0%
!!! AGTTTATATGGAAAGTTTTA+TGG - chr7_2:82056358-82056377 Msa1082090:CDS 20.0%
! TACTAAGTTTAAGAATTTGC+GGG + chr7_2:82053725-82053744 None:intergenic 25.0%
! GTACTAAGTTTAAGAATTTG+CGG + chr7_2:82053726-82053745 None:intergenic 25.0%
! ACTATGAATCTTTGTATCAT+CGG + chr7_2:82054016-82054035 None:intergenic 25.0%
! ACAAAAAAACACAAACATCA+TGG - chr7_2:82054073-82054092 Msa1082090:CDS 25.0%
!! AGACATTTGAATTTTCACAA+TGG - chr7_2:82054108-82054127 Msa1082090:CDS 25.0%
!!! AACAATTGATGAAAGTGTTA+CGG - chr7_2:82054212-82054231 Msa1082090:intron 25.0%
!! TTTCTGATTTTTGTTACTGA+GGG - chr7_2:82054339-82054358 Msa1082090:intron 25.0%
!!! ATCAAGTACTTCTTGTTTTT+GGG + chr7_2:82054390-82054409 None:intergenic 25.0%
!! TTAATGAGGTATTCTTACAT+GGG - chr7_2:82054515-82054534 Msa1082090:intron 25.0%
! AACAAAGGAAAATTCTACTA+TGG + chr7_2:82054690-82054709 None:intergenic 25.0%
! AATACATGAACCGTATTATA+AGG - chr7_2:82055019-82055038 Msa1082090:intron 25.0%
!! ATAATGCTAAAAACTTTTCC+TGG - chr7_2:82055151-82055170 Msa1082090:intron 25.0%
!! TTTTCAGTATTTCTTTTTCC+AGG + chr7_2:82055172-82055191 None:intergenic 25.0%
!!! ACTTTCAAAGTCTTGTTTAA+CGG + chr7_2:82055303-82055322 None:intergenic 25.0%
! AAGTATATATGATCATCTCT+TGG - chr7_2:82055599-82055618 Msa1082090:intron 25.0%
! GATTAAGTGTGATTGAATTT+AGG + chr7_2:82055713-82055732 None:intergenic 25.0%
! ATATCATAAAGTGAGCATAA+AGG + chr7_2:82055900-82055919 None:intergenic 25.0%
! TATAAAAGCTAGTGATGATT+TGG - chr7_2:82056274-82056293 Msa1082090:CDS 25.0%
!! TTTTACAGTGGATAACTTTT+TGG - chr7_2:82056541-82056560 Msa1082090:CDS 25.0%
AGAAAAGTAGAGTGTAAGAA+TGG + chr7_2:82053521-82053540 None:intergenic 30.0%
TTTGCAAAAAGGAGGATTTA+CGG + chr7_2:82053629-82053648 None:intergenic 30.0%
AAAACGACCATAGTCAATTA+CGG + chr7_2:82053677-82053696 None:intergenic 30.0%
! TATTTTGTTGAGCTAGGAAT+TGG + chr7_2:82053810-82053829 None:intergenic 30.0%
! ATTCGATATTTTGTTGAGCT+AGG + chr7_2:82053816-82053835 None:intergenic 30.0%
AATTCTTCACCTTGAGAAAT+GGG + chr7_2:82053886-82053905 None:intergenic 30.0%
AAATTCTTCACCTTGAGAAA+TGG + chr7_2:82053887-82053906 None:intergenic 30.0%
! AACCAACAAACTTGTTTAGA+TGG - chr7_2:82053934-82053953 Msa1082090:CDS 30.0%
AACCATCTAAACAAGTTTGT+TGG + chr7_2:82053939-82053958 None:intergenic 30.0%
!!! TCCCTTGCTCTATTTTTAAA+GGG - chr7_2:82054039-82054058 Msa1082090:CDS 30.0%
! ACCCTTTAAAAATAGAGCAA+GGG + chr7_2:82054043-82054062 None:intergenic 30.0%
! AACCCTTTAAAAATAGAGCA+AGG + chr7_2:82054044-82054063 None:intergenic 30.0%
!!! TTGCTCTATTTTTAAAGGGT+TGG - chr7_2:82054043-82054062 Msa1082090:CDS 30.0%
!!! TGCTCTATTTTTAAAGGGTT+GGG - chr7_2:82054044-82054063 Msa1082090:CDS 30.0%
! TTCAAATGTCTTCCATTTTG+TGG + chr7_2:82054099-82054118 None:intergenic 30.0%
! ACTTTATCCGACATTTTCAA+CGG + chr7_2:82054141-82054160 None:intergenic 30.0%
ATTGTGATTGTTAACCAAGA+TGG - chr7_2:82054243-82054262 Msa1082090:intron 30.0%
TAAAATTTCCACTTCCATCT+TGG + chr7_2:82054260-82054279 None:intergenic 30.0%
! CTTTCTGATTTTTGTTACTG+AGG - chr7_2:82054338-82054357 Msa1082090:intron 30.0%
!!! CATCAAGTACTTCTTGTTTT+TGG + chr7_2:82054391-82054410 None:intergenic 30.0%
!! AAACAAGAAGTACTTGATGA+TGG - chr7_2:82054392-82054411 Msa1082090:intron 30.0%
ATTAATCGAACGATTATCAC+TGG - chr7_2:82054426-82054445 Msa1082090:intron 30.0%
GGTGATCATAATGTTATTGA+TGG - chr7_2:82054447-82054466 Msa1082090:intron 30.0%
! GTTAATGAGGTATTCTTACA+TGG - chr7_2:82054514-82054533 Msa1082090:intron 30.0%
TTTCATGCATGCTATAAGTA+AGG + chr7_2:82054922-82054941 None:intergenic 30.0%
! CACATGTATTTAGGATTATG+TGG - chr7_2:82054952-82054971 Msa1082090:intron 30.0%
!! GTATTTTATTTCTTGAGGGA+GGG + chr7_2:82055004-82055023 None:intergenic 30.0%
!! TGTATTTTATTTCTTGAGGG+AGG + chr7_2:82055005-82055024 None:intergenic 30.0%
TTGTAAGGTAGTAATCTAGA+TGG + chr7_2:82055782-82055801 None:intergenic 30.0%
!! TCTTGATGGATGATTTTGTA+AGG + chr7_2:82055797-82055816 None:intergenic 30.0%
ATACCAAGAAATACACTTTG+AGG + chr7_2:82055826-82055845 None:intergenic 30.0%
TAACATAACATTTCGCAACA+CGG - chr7_2:82055956-82055975 Msa1082090:CDS 30.0%
!!! TGTTTTGATTTGGATCTGTT+CGG + chr7_2:82056229-82056248 None:intergenic 30.0%
TACGCAGAGTATAATAATAC+AGG - chr7_2:82056446-82056465 Msa1082090:CDS 30.0%
GAGTATAATAATACAGGACT+TGG - chr7_2:82056452-82056471 Msa1082090:CDS 30.0%
ATACTAGTATGAGAGTGAAT+TGG - chr7_2:82056480-82056499 Msa1082090:CDS 30.0%
TTCTCTTTCACTTTCCATCT+TGG - chr7_2:82053537-82053556 Msa1082090:CDS 35.0%
! TAATGGTAATGATGCCAAGA+TGG + chr7_2:82053554-82053573 None:intergenic 35.0%
TTATCAGCTAGGGATGATAA+TGG + chr7_2:82053571-82053590 None:intergenic 35.0%
ATCCCTAGCTGATAATTCTA+AGG - chr7_2:82053576-82053595 Msa1082090:CDS 35.0%
GACCTTAGAATTATCAGCTA+GGG + chr7_2:82053581-82053600 None:intergenic 35.0%
! AGTAGAGTTTTGCAAAAAGG+AGG + chr7_2:82053637-82053656 None:intergenic 35.0%
! GCAAGTAGAGTTTTGCAAAA+AGG + chr7_2:82053640-82053659 None:intergenic 35.0%
! ACTCTACTTGCTAACCAAAA+CGG - chr7_2:82053649-82053668 Msa1082090:CDS 35.0%
GTTTAAGAATTTGCGGGATT+GGG + chr7_2:82053719-82053738 None:intergenic 35.0%
AGTTTAAGAATTTGCGGGAT+TGG + chr7_2:82053720-82053739 None:intergenic 35.0%
! TCTTTAAGAGCGGAAATTGT+GGG + chr7_2:82053784-82053803 None:intergenic 35.0%
! ATCTTTAAGAGCGGAAATTG+TGG + chr7_2:82053785-82053804 None:intergenic 35.0%
! GAATTGGCAATCTTTAAGAG+CGG + chr7_2:82053794-82053813 None:intergenic 35.0%
AATGTTCTTCCCATTTCTCA+AGG - chr7_2:82053874-82053893 Msa1082090:CDS 35.0%
TGGTTTAATTACCGCATCTT+CGG - chr7_2:82053954-82053973 Msa1082090:CDS 35.0%
!!! GTCCCTTGCTCTATTTTTAA+AGG - chr7_2:82054038-82054057 Msa1082090:CDS 35.0%
!!! CTATTTTTAAAGGGTTGGGT+TGG - chr7_2:82054048-82054067 Msa1082090:CDS 35.0%
TCGTTTACCGTTGAAAATGT+CGG - chr7_2:82054131-82054150 Msa1082090:CDS 35.0%
ATTCAGCTAGAAATCGTCAT+GGG - chr7_2:82054175-82054194 Msa1082090:intron 35.0%
ATTGTTAACCAAGATGGAAG+TGG - chr7_2:82054249-82054268 Msa1082090:intron 35.0%
AAACGTTGCACCAAATAACA+CGG - chr7_2:82054299-82054318 Msa1082090:intron 35.0%
!! AAGAAGTACTTGATGATGGT+TGG - chr7_2:82054396-82054415 Msa1082090:intron 35.0%
ACGTTCAATTCAGCAACATT+TGG - chr7_2:82054477-82054496 Msa1082090:intron 35.0%
AGTTGTCATGATGTTGTAGT+CGG + chr7_2:82055235-82055254 None:intergenic 35.0%
AAATATACTCACTCTGGTCA+TGG + chr7_2:82055519-82055538 None:intergenic 35.0%
!! CTTTGAGGTAGTAATCTTGA+TGG + chr7_2:82055811-82055830 None:intergenic 35.0%
CTACCTCAAAGTGTATTTCT+TGG - chr7_2:82055820-82055839 Msa1082090:CDS 35.0%
TTATGATATACTTGCAGCTG+TGG - chr7_2:82055911-82055930 Msa1082090:CDS 35.0%
TTCGCGATAAAATTGTCTCA+TGG + chr7_2:82056087-82056106 None:intergenic 35.0%
! GGAACAGTTGACTTCATATT+TGG - chr7_2:82056119-82056138 Msa1082090:CDS 35.0%
ACAGATCCAAATCAAAACAC+AGG - chr7_2:82056230-82056249 Msa1082090:CDS 35.0%
!!! GAAGTTCCTGTGTTTTGATT+TGG + chr7_2:82056239-82056258 None:intergenic 35.0%
! GTTTTCACTGTACCAATCAA+CGG + chr7_2:82056302-82056321 None:intergenic 35.0%
GTACTCAAGGACAGTTTATA+TGG - chr7_2:82056346-82056365 Msa1082090:CDS 35.0%
GACAGTTTGATAAATCCTTC+TGG - chr7_2:82056380-82056399 Msa1082090:CDS 35.0%
GTTTGATAAATCCTTCTGGT+TGG - chr7_2:82056384-82056403 Msa1082090:CDS 35.0%
AGTATGAGAGTGAATTGGAT+TGG - chr7_2:82056485-82056504 Msa1082090:CDS 35.0%
! TGATGCTGCTAATTTTACAG+TGG - chr7_2:82056529-82056548 Msa1082090:CDS 35.0%
! ACAGTGGATAACTTTTTGGA+TGG - chr7_2:82056545-82056564 Msa1082090:CDS 35.0%
! CAGTGGATAACTTTTTGGAT+GGG - chr7_2:82056546-82056565 Msa1082090:CDS 35.0%
! AGTGGATAACTTTTTGGATG+GGG - chr7_2:82056547-82056566 Msa1082090:CDS 35.0%
AAGTATGAAACACCAGTTTG+AGG + chr7_2:82056584-82056603 None:intergenic 35.0%
GGACCTTAGAATTATCAGCT+AGG + chr7_2:82053582-82053601 None:intergenic 40.0%
! GGGATTGGGATAAGGATTTT+CGG + chr7_2:82053705-82053724 None:intergenic 40.0%
! TGTTAAAACAGCACTGAGCA+AGG + chr7_2:82053914-82053933 None:intergenic 40.0%
CAAACATCATGGCCACAAAA+TGG - chr7_2:82054084-82054103 Msa1082090:CDS 40.0%
GATTCAGCTAGAAATCGTCA+TGG - chr7_2:82054174-82054193 Msa1082090:CDS 40.0%
! CTACTAGCAACCGTGTTATT+TGG + chr7_2:82054312-82054331 None:intergenic 40.0%
AATAACACGGTTGCTAGTAG+TGG - chr7_2:82054312-82054331 Msa1082090:intron 40.0%
!! TACTTGATGATGGTTGGAGA+TGG - chr7_2:82054402-82054421 Msa1082090:intron 40.0%
!! ACTTGATGATGGTTGGAGAT+GGG - chr7_2:82054403-82054422 Msa1082090:intron 40.0%
!!! GATGCTAGCTAGCTTTTGAT+TGG + chr7_2:82054816-82054835 None:intergenic 40.0%
GTTTAACGGAAAACACGAGA+GGG + chr7_2:82055289-82055308 None:intergenic 40.0%
TGTTTAACGGAAAACACGAG+AGG + chr7_2:82055290-82055309 None:intergenic 40.0%
! TTGACTACTCTTTTGAACGC+TGG - chr7_2:82055323-82055342 Msa1082090:intron 40.0%
GGTACAGTGAAAACATACCT+TGG - chr7_2:82056308-82056327 Msa1082090:CDS 40.0%
CAGTGAAAACATACCTTGGT+AGG - chr7_2:82056312-82056331 Msa1082090:CDS 40.0%
! ACTTTTTGGATGGGGATAGT+TGG - chr7_2:82056555-82056574 Msa1082090:CDS 40.0%
ACTGGTGTTTCATACTTGAG+TGG - chr7_2:82056587-82056606 Msa1082090:CDS 40.0%
ACTCGCAGATTGTTTGTCGT+GGG + chr7_2:82053603-82053622 None:intergenic 45.0%
GCAAAAAGGAGGATTTACGG+TGG + chr7_2:82053626-82053645 None:intergenic 45.0%
!!! AGTCAATTACGGTGCCGTTT+TGG + chr7_2:82053666-82053685 None:intergenic 45.0%
AACGGCACCGTAATTGACTA+TGG - chr7_2:82053667-82053686 Msa1082090:CDS 45.0%
GAATTTGCGGGATTGGGATA+AGG + chr7_2:82053713-82053732 None:intergenic 45.0%
TACCGCATCTTCGGATCAAA+CGG - chr7_2:82053963-82053982 Msa1082090:CDS 45.0%
ATAACATTTCGCAACACGGC+TGG - chr7_2:82055960-82055979 Msa1082090:CDS 45.0%
TATCGCGAATGCGACATCTA+TGG - chr7_2:82056098-82056117 Msa1082090:CDS 45.0%
TTCAACGCTATAACCGCTCA+AGG - chr7_2:82056203-82056222 Msa1082090:CDS 45.0%
! GATGATTTGGCTCCGTTGAT+TGG - chr7_2:82056287-82056306 Msa1082090:CDS 45.0%
AAACATACCTTGGTAGGCCA+TGG - chr7_2:82056318-82056337 Msa1082090:CDS 45.0%
GTCCTTGAGTACTCTTTCCA+TGG + chr7_2:82056338-82056357 None:intergenic 45.0%
GATAGTTGGTTGCCTCAAAC+TGG - chr7_2:82056569-82056588 Msa1082090:CDS 45.0%
!! TTATATAGTTAATATAAAAT+AGG - chr7_2:82055193-82055212 Msa1082090:intron 5.0%
!! TATATAGTTAATATAAAATA+GGG - chr7_2:82055194-82055213 Msa1082090:intron 5.0%
GACTCGCAGATTGTTTGTCG+TGG + chr7_2:82053604-82053623 None:intergenic 50.0%
CACCGTTTGATCCGAAGATG+CGG + chr7_2:82053968-82053987 None:intergenic 50.0%
TTGCAGCTGTGGTTGCACAA+GGG - chr7_2:82055922-82055941 Msa1082090:CDS 50.0%
GGTTGCACAAGGGTTCTTAG+CGG - chr7_2:82055932-82055951 Msa1082090:CDS 50.0%
AAGCAAACACCAAGCAGTCG+CGG - chr7_2:82055986-82056005 Msa1082090:CDS 50.0%
CAAGCAGTCGCGGTAAGAAA+CGG - chr7_2:82055996-82056015 Msa1082090:CDS 50.0%
TTCGAAGCTGCAGCTGTAGA+AGG + chr7_2:82056036-82056055 None:intergenic 50.0%
TTCTACAGCTGCAGCTTCGA+AGG - chr7_2:82056035-82056054 Msa1082090:CDS 50.0%
ATTGTCCACTGCTGGGAAGT+CGG + chr7_2:82056184-82056203 None:intergenic 50.0%
GCGTTGAATTGTCCACTGCT+GGG + chr7_2:82056191-82056210 None:intergenic 50.0%
! AGCGTTGAATTGTCCACTGC+TGG + chr7_2:82056192-82056211 None:intergenic 50.0%
ACTCTTTCCATGGCCTACCA+AGG + chr7_2:82056328-82056347 None:intergenic 50.0%
!! GGCCATGGAAAGAGTACTCA+AGG - chr7_2:82056333-82056352 Msa1082090:CDS 50.0%
! ATCCTTCTGGTTGGCGTGAA+TGG - chr7_2:82056393-82056412 Msa1082090:CDS 50.0%
CTTGCAGCTGTGGTTGCACA+AGG - chr7_2:82055921-82055940 Msa1082090:CDS 55.0%
!! GCGACTGCTTGGTGTTTGCT+TGG + chr7_2:82055987-82056006 None:intergenic 55.0%
CGTTTCTTACCGCGACTGCT+TGG + chr7_2:82055998-82056017 None:intergenic 55.0%
GAAGCTGCAGCTGTAGAAGG+TGG + chr7_2:82056033-82056052 None:intergenic 55.0%
TTGTCCACTGCTGGGAAGTC+GGG + chr7_2:82056183-82056202 None:intergenic 55.0%
TGGATCTGTTCGGCCTTGAG+CGG + chr7_2:82056219-82056238 None:intergenic 55.0%
CTCCATTCACGCCAACCAGA+AGG + chr7_2:82056398-82056417 None:intergenic 55.0%
TCTGGTTGGCGTGAATGGAG+TGG - chr7_2:82056398-82056417 Msa1082090:CDS 55.0%
CTGGTTGGCGTGAATGGAGT+GGG - chr7_2:82056399-82056418 Msa1082090:CDS 55.0%
TGGTTGGCGTGAATGGAGTG+GGG - chr7_2:82056400-82056419 Msa1082090:CDS 55.0%
TATCCCCGACTTCCCAGCAG+TGG - chr7_2:82056176-82056195 Msa1082090:CDS 60.0%
TGTCCACTGCTGGGAAGTCG+GGG + chr7_2:82056182-82056201 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82053499 82056622 82053499 ID=Msa1082090;Name=Msa1082090
chr7_2 mRNA 82053499 82056622 82053499 ID=Msa1082090-mRNA-1;Parent=Msa1082090;Name=Msa1082090-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|2|0|564
chr7_2 exon 82055623 82056622 82055623 ID=Msa1082090-mRNA-1:exon:21144;Parent=Msa1082090-mRNA-1
chr7_2 exon 82053499 82054193 82053499 ID=Msa1082090-mRNA-1:exon:21143;Parent=Msa1082090-mRNA-1
chr7_2 CDS 82055623 82056622 82055623 ID=Msa1082090-mRNA-1:cds;Parent=Msa1082090-mRNA-1
chr7_2 CDS 82053499 82054193 82053499 ID=Msa1082090-mRNA-1:cds;Parent=Msa1082090-mRNA-1
Gene Sequence

>Msa1082090

ATGGCTTTCAAGAACTTTTCCATTCTTACACTCTACTTTTCTCTTTCACTTTCCATCTTGGCATCATTACCATTATCATCCCTAGCTGATAATTCTAAGGTCCCACGACAAACAATCTGCGAGTCCACCGTAAATCCTCCTTTTTGCAAAACTCTACTTGCTAACCAAAACGGCACCGTAATTGACTATGGTCGTTTTTCTATCCGAAAATCCTTATCCCAATCCCGCAAATTCTTAAACTTAGTACTTTCACATCTTCAAAATAAATCATCTTTGTCACAACCCACAATTTCCGCTCTTAAAGATTGCCAATTCCTAGCTCAACAAAATATCGAATTCTTAACAAACACTCATCAAACTGCTAATAAAACTAGCAATGTTCTTCCCATTTCTCAAGGTGAAGAATTTCAAACCTTGCTCAGTGCTGTTTTAACAAACCAACAAACTTGTTTAGATGGTTTAATTACCGCATCTTCGGATCAAACGGTGATTAATGATTTTTCATCAACAATTTCCGATGATACAAAGATTCATAGTGTGTCCCTTGCTCTATTTTTAAAGGGTTGGGTTGGTGACAAAAAAACACAAACATCATGGCCACAAAATGGAAGACATTTGAATTTTCACAATGGTCGTTTACCGTTGAAAATGTCGGATAAAGTACGTGCTATTTATGATTCAGCTAGAAATCGTCATGGGCGAAAGTTACTTCAAACAATTGATGAAAGTGTTACGGTAAGTGAAATTGTGATTGTTAACCAAGATGGAAGTGGAAATTTTACAACTATTAATGATGCTATAAACGTTGCACCAAATAACACGGTTGCTAGTAGTGGTTACTTTCTGATTTTTGTTACTGAGGGTGTGTATCAAGAGTATGTATCTATACCCAAAAACAAGAAGTACTTGATGATGGTTGGAGATGGGATTAATCGAACGATTATCACTGGTGATCATAATGTTATTGATGGTTCTACAACGTTCAATTCAGCAACATTTGCTGTGGTTGCACAAGGGTTCTTAGCGGTTAACATAACATTTCGCAACACGGCTGGACCAAGCAAACACCAAGCAGTCGCGGTAAGAAACGGAGCTGATTTGTCCACCTTCTACAGCTGCAGCTTCGAAGGCTATCAAGATACTTTGTACACACATTCCATGAGACAATTTTATCGCGAATGCGACATCTATGGAACAGTTGACTTCATATTTGGAAATGCTGCAGTTGTTTTACAATCTTGCAACATATATCCCCGACTTCCCAGCAGTGGACAATTCAACGCTATAACCGCTCAAGGCCGAACAGATCCAAATCAAAACACAGGAACTTCTATACATAATGCAACTATAAAAGCTAGTGATGATTTGGCTCCGTTGATTGGTACAGTGAAAACATACCTTGGTAGGCCATGGAAAGAGTACTCAAGGACAGTTTATATGGAAAGTTTTATGGACAGTTTGATAAATCCTTCTGGTTGGCGTGAATGGAGTGGGGATTTTGCATTAAGCACATTATATTACGCAGAGTATAATAATACAGGACTTGGTTCAGATACTAGTATGAGAGTGAATTGGATTGGTTATCATCTTATTAATGCTACTGATGCTGCTAATTTTACAGTGGATAACTTTTTGGATGGGGATAGTTGGTTGCCTCAAACTGGTGTTTCATACTTGAGTGGATTGATCATATAA
Protein sequence

>Msa1082090

MAFKNFSILTLYFSLSLSILASLPLSSLADNSKVPRQTICESTVNPPFCKTLLANQNGTVIDYGRFSIRKSLSQSRKFLNLVLSHLQNKSSLSQPTISALKDCQFLAQQNIEFLTNTHQTANKTSNVLPISQGEEFQTLLSAVLTNQQTCLDGLITASSDQTVINDFSSTISDDTKIHSVSLALFLKGWVGDKKTQTSWPQNGRHLNFHNGRLPLKMSDKVRAIYDSARNRHGRKLLQTIDESVTVSEIVIVNQDGSGNFTTINDAINVAPNNTVASSGYFLIFVTEGVYQEYVSIPKNKKYLMMVGDGINRTIITGDHNVIDGSTTFNSATFAVVAQGFLAVNITFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQSCNIYPRLPSSGQFNAITAQGRTDPNQNTGTSIHNATIKASDDLAPLIGTVKTYLGRPWKEYSRTVYMESFMDSLINPSGWREWSGDFALSTLYYAEYNNTGLGSDTSMRVNWIGYHLINATDAANFTVDNFLDGDSWLPQTGVSYLSGLII*