AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0518490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518490 MtrunA17_Chr3g0130611 91.856 528 6 3 19 509 1 528 0.0 956
Msa0518490 MtrunA17_Chr1g0209091 40.230 522 272 6 19 503 1 519 3.46e-127 380
Msa0518490 MtrunA17_Chr1g0209111 39.216 255 141 3 32 273 12 265 7.35e-62 204
Msa0518490 MtrunA17_Chr1g0209101 39.453 256 129 3 272 503 4 257 3.29e-53 180
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0518490 AT2G01170.1 39.923 521 267 7 19 502 3 514 9.17e-118 357
Msa0518490 AT2G01170.2 39.220 436 225 6 104 502 3 435 1.84e-90 283

Find 124 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGCATCATTTCAGTATT+TGG 0.119079 3_4:+70301636 Msa0518490:CDS
TCAACTTTGATTCAGGATTT+TGG 0.145062 3_4:+70302041 Msa0518490:intron
CAACTGGTTCTCTGTACTTT+TGG 0.160818 3_4:+70300522 Msa0518490:CDS
ATTATGCACCTGTTGCTTTA+TGG 0.180515 3_4:+70302886 Msa0518490:CDS
AGATGCAAGAAAATGGTTTA+AGG 0.226303 3_4:+70302944 Msa0518490:CDS
ACTACATTCACCTTCAAAAT+TGG 0.230691 3_4:-70302642 None:intergenic
GCAGCAATCTGCATTCTTCT+TGG 0.235084 3_4:+70302615 Msa0518490:CDS
ATACATAAGAATAGCCATTT+TGG 0.251599 3_4:-70300935 None:intergenic
TTCTTCCATAAGAATGAAAA+TGG 0.252336 3_4:-70302546 None:intergenic
CAGGCCCTGCAAGTCTTGTT+TGG 0.252615 3_4:+70300000 Msa0518490:CDS
TTTGCTTGATAGCATTTCTA+TGG 0.255593 3_4:+70302799 Msa0518490:CDS
ACATTGGCCTCACTGTTATA+TGG 0.257508 3_4:+70300960 Msa0518490:CDS
TTATGCACCTGTTGCTTTAT+GGG 0.269673 3_4:+70302887 Msa0518490:CDS
GGCACTTACATTCAGCATTC+AGG 0.273760 3_4:+70301674 Msa0518490:CDS
AGGCCCTGCAAGTCTTGTTT+GGG 0.292654 3_4:+70300001 Msa0518490:CDS
GGGTATTAGATGCAAGAAAA+TGG 0.313548 3_4:+70302937 Msa0518490:CDS
CACATTTAGCTGGTCCGAAA+TGG 0.325538 3_4:+70300549 Msa0518490:CDS
GCTCCAGCTGTCTCATTGTT+TGG 0.328718 3_4:-70302077 None:intergenic
TTGAAAGTATCCCATGTAAT+AGG 0.337507 3_4:-70302864 None:intergenic
GTTTCTTCACTTGGTTTGTT+GGG 0.339481 3_4:+70300039 Msa0518490:CDS
CTCTCAACAGGCACAAATAA+AGG 0.345923 3_4:+70300896 Msa0518490:CDS
GAAGAAAATGGTCCCCATTT+CGG 0.356622 3_4:-70300563 None:intergenic
GTTGCTTTATGGGTCGGTTT+GGG 0.359695 3_4:+70302897 Msa0518490:CDS
TGTTGCTTTATGGGTCGGTT+TGG 0.362298 3_4:+70302896 Msa0518490:CDS
TGTCACTTCCGGAACAAAAC+TGG 0.363476 3_4:-70299716 None:intergenic
TGTTTCTTCACTTGGTTTGT+TGG 0.363835 3_4:+70300038 Msa0518490:CDS
CTTGCCTTGCCCAAATAAAA+AGG 0.366855 3_4:-70302768 None:intergenic
TGAGCATCAATGTTCCTAAC+TGG 0.368203 3_4:-70302969 None:intergenic
CTATGCCCTGTCAAGGGATA+AGG 0.370330 3_4:+70302518 Msa0518490:CDS
GAGGGTACTTTGCTCCAAAA+TGG 0.371022 3_4:+70300921 Msa0518490:CDS
TCATCGATATAATTTCAATA+TGG 0.373370 3_4:+70301020 Msa0518490:CDS
TCTCATTGTTTGGATCATAA+AGG 0.378149 3_4:-70302067 None:intergenic
GATGCAAGAAAATGGTTTAA+GGG 0.381285 3_4:+70302945 Msa0518490:CDS
ATCACCATTCTTGCAAAGAT+TGG 0.383163 3_4:-70302720 None:intergenic
GTGAGCCAGTATTCCCTCTA+TGG 0.384775 3_4:+70301537 Msa0518490:intron
CTGCAAGTCTTGTTTGGGGA+TGG 0.389171 3_4:+70300006 Msa0518490:CDS
TTTCTTCATGGTGTTGTGCT+TGG 0.389525 3_4:+70300579 Msa0518490:CDS
CATCCCCAAACAAGACTTGC+AGG 0.394578 3_4:-70300005 None:intergenic
AGAAATGCTATCAAGCAAAT+TGG 0.403456 3_4:-70302795 None:intergenic
TCAACAGAACCCTTGTTACA+TGG 0.405450 3_4:+70299684 Msa0518490:CDS
AATGGTTTAAGGGGCCAGTT+AGG 0.414282 3_4:+70302955 Msa0518490:CDS
TAGTTGTTTGTTTCTTCACT+TGG 0.416921 3_4:+70300030 Msa0518490:CDS
ACATTTAGCTGGTCCGAAAT+GGG 0.416980 3_4:+70300550 Msa0518490:CDS
GTTTGGGTCTAATAATGCTT+TGG 0.418172 3_4:+70302913 Msa0518490:CDS
TTTGTAGGAACCTTGTGTTT+TGG 0.418644 3_4:-70302576 None:intergenic
GCACAACACCATGAAGAAAA+TGG 0.419284 3_4:-70300575 None:intergenic
ATTTGGATGGGCTTACATCT+TGG 0.421982 3_4:+70301653 Msa0518490:CDS
AATGATAGAATCACTGCATA+TGG 0.426309 3_4:-70301510 None:intergenic
TGGGTCTAATAATGCTTTGG+TGG 0.434711 3_4:+70302916 Msa0518490:CDS
CAACTCTTTATCCTATTACA+TGG 0.435931 3_4:+70302853 Msa0518490:CDS
GATTCAATCTAACAGACAAC+TGG 0.436647 3_4:+70300506 Msa0518490:intron
CAGAGCCATACAGCATTTGT+AGG 0.439578 3_4:-70302591 None:intergenic
ATAACTTCAATAGCCACAAT+TGG 0.440996 3_4:+70302675 Msa0518490:CDS
ACTGGAATCACACCTCTGTA+TGG 0.444050 3_4:+70299960 Msa0518490:CDS
GCAAGAACTAAGAAGAGAAA+TGG 0.444571 3_4:+70299792 Msa0518490:CDS
CCAGGCTTGAAGTTCTTCTC+AGG 0.445201 3_4:-70302744 None:intergenic
GAATTAGCATCTGATACAAC+AGG 0.449362 3_4:+70301474 Msa0518490:CDS
TGCAAGTCTTGTTTGGGGAT+GGG 0.454102 3_4:+70300007 Msa0518490:CDS
TAGGATAAAGAGTTGGCAAC+AGG 0.454242 3_4:-70302845 None:intergenic
CATTGGCCTCACTGTTATAT+GGG 0.456388 3_4:+70300961 Msa0518490:CDS
AGTTCCAATCTTTGCAAGAA+TGG 0.458612 3_4:+70302716 Msa0518490:CDS
GCATCATTTCAGTATTTGGA+TGG 0.461596 3_4:+70301640 Msa0518490:CDS
GCACCTGTTGCTTTATGGGT+CGG 0.463297 3_4:+70302891 Msa0518490:CDS
AGTTTAATCCTACTCTCAAC+AGG 0.469361 3_4:+70300884 Msa0518490:CDS
GGAAGATATCACAATTCTGC+TGG 0.469478 3_4:+70302137 Msa0518490:CDS
TTTCTGTGTCAGGTTATTGG+TGG 0.473306 3_4:+70301378 Msa0518490:intron
GAACTCCCTTATCCCTTGAC+AGG 0.479526 3_4:-70302524 None:intergenic
AATACTACCAAGTATTGCTA+TGG 0.480039 3_4:-70301616 None:intergenic
GCCACAATTGGATGGGTTGG+TGG 0.481482 3_4:+70302687 Msa0518490:CDS
GGGTCTAATAATGCTTTGGT+GGG 0.484279 3_4:+70302917 Msa0518490:CDS
AAACCGACCCATAAAGCAAC+AGG 0.485070 3_4:-70302894 None:intergenic
TATAATTTCAATATGGTGGC+AGG 0.485261 3_4:+70301027 Msa0518490:CDS
TATGCCCTGTCAAGGGATAA+GGG 0.485928 3_4:+70302519 Msa0518490:CDS
ATAGCAATACTTGGTAGTAT+TGG 0.486608 3_4:+70301618 Msa0518490:CDS
CTTCAATAGCCACAATTGGA+TGG 0.494941 3_4:+70302679 Msa0518490:CDS
ATGGTTGGAAAGGCGTATGC+AGG 0.497048 3_4:+70300845 Msa0518490:intron
CATCATTTCAGTATTTGGAT+GGG 0.498028 3_4:+70301641 Msa0518490:CDS
CAGAATTGTGATATCTTCCA+TGG 0.503563 3_4:-70302133 None:intergenic
TATTGAAATTATATCGATGA+AGG 0.507414 3_4:-70301017 None:intergenic
AACTCTTTATCCTATTACAT+GGG 0.509862 3_4:+70302854 Msa0518490:CDS
TATTTGTGCCTGTTGAGAGT+AGG 0.510878 3_4:-70300892 None:intergenic
CCTGAGAAGAACTTCAAGCC+TGG 0.511772 3_4:+70302744 Msa0518490:CDS
AATATGAATTCATCCAATAG+TGG 0.513484 3_4:+70298151 None:intergenic
GGTTCTAGCCTTCTGTATGC+AGG 0.514787 3_4:+70299981 Msa0518490:CDS
GATAGTGATACTGTTACCTC+TGG 0.519304 3_4:+70301407 Msa0518490:CDS
TTCAGGTCTATGCCCTGTCA+AGG 0.519937 3_4:+70302511 Msa0518490:intron
ATAGCCACAATTGGATGGGT+TGG 0.526969 3_4:+70302684 Msa0518490:CDS
GTTTCAGTCCCCATGTAACA+AGG 0.526977 3_4:-70299694 None:intergenic
GAGAAGAGACTAAATGAGCT+TGG 0.534894 3_4:+70299763 Msa0518490:CDS
AGGTTCCTACAAATGCTGTA+TGG 0.535547 3_4:+70302586 Msa0518490:CDS
GATCCAAACAATGAGACAGC+TGG 0.539193 3_4:+70302074 Msa0518490:CDS
TCGATATAATTTCAATATGG+TGG 0.540538 3_4:+70301023 Msa0518490:CDS
TTCAATAGCCACAATTGGAT+GGG 0.541163 3_4:+70302680 Msa0518490:CDS
AGTGACAGAAAACATAGCTA+TGG 0.548979 3_4:+70299732 Msa0518490:CDS
ATGCAAGAAAATGGTTTAAG+GGG 0.550033 3_4:+70302946 Msa0518490:CDS
CTGCAGCATCATATCCATAG+AGG 0.550623 3_4:-70301551 None:intergenic
AATGGACCCATAGCAATACT+TGG 0.552434 3_4:+70301609 Msa0518490:CDS
ATACTCTATGATGCATTCCA+TGG 0.552503 3_4:+70302116 Msa0518490:CDS
ACTAAAGGTGCAGACAAGAA+TGG 0.554611 3_4:+70301591 Msa0518490:CDS
ACAGGCACAAATAAAGGCGG+AGG 0.555550 3_4:+70300902 Msa0518490:CDS
CAACAGAACCCTTGTTACAT+GGG 0.555798 3_4:+70299685 Msa0518490:CDS
CTATTCTTATGTATGTACAT+TGG 0.562884 3_4:+70300944 Msa0518490:CDS
TTGGTTTGTTGGGATTGCAA+TGG 0.572687 3_4:+70300049 Msa0518490:CDS
CATGTAATAGGATAAAGAGT+TGG 0.573094 3_4:-70302852 None:intergenic
ACCACCAACCCATCCAATTG+TGG 0.576324 3_4:-70302688 None:intergenic
TCAGGTCTATGCCCTGTCAA+GGG 0.590519 3_4:+70302512 Msa0518490:intron
GCATCATAGAGTATTTGTGC+TGG 0.596421 3_4:-70302107 None:intergenic
CATTTAACTGAAGAAACTAA+AGG 0.601435 3_4:+70301576 Msa0518490:CDS
GGCCCTGCAAGTCTTGTTTG+GGG 0.606319 3_4:+70300002 Msa0518490:CDS
ATACTACCAAGTATTGCTAT+GGG 0.606656 3_4:-70301615 None:intergenic
TTGCAGGGCCTGCATACAGA+AGG 0.612492 3_4:-70299989 None:intergenic
CATTTAGCTGGTCCGAAATG+GGG 0.626758 3_4:+70300551 Msa0518490:CDS
TGCAGCATCATATCCATAGA+GGG 0.645076 3_4:-70301550 None:intergenic
AGTGATACTGTTACCTCTGG+TGG 0.645216 3_4:+70301410 Msa0518490:CDS
ATCCCCAAACAAGACTTGCA+GGG 0.654831 3_4:-70300004 None:intergenic
AACAGAACCCTTGTTACATG+GGG 0.656415 3_4:+70299686 Msa0518490:CDS
TTTCAGTCCCCATGTAACAA+GGG 0.659735 3_4:-70299693 None:intergenic
TGTTTAGTTAGTGCCACCAG+AGG 0.660806 3_4:-70301423 None:intergenic
CAGGCACAAATAAAGGCGGA+GGG 0.669164 3_4:+70300903 Msa0518490:CDS
AACTCCCTTATCCCTTGACA+GGG 0.675866 3_4:-70302523 None:intergenic
GAAACTGCATCCAAAACACA+AGG 0.696453 3_4:+70302566 Msa0518490:CDS
TCAACAGGCACAAATAAAGG+CGG 0.709488 3_4:+70300899 Msa0518490:CDS
ATGCTGCCCATATAACAGTG+AGG 0.755036 3_4:-70300967 None:intergenic
AGAAGGCTAGAACCATACAG+AGG 0.767417 3_4:-70299972 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTGTATATTAGAT+TGG - chr3_4:70298978-70298997 None:intergenic 10.0%
!!! TCTTTATTTTATAATTGAAA+AGG - chr3_4:70300384-70300403 None:intergenic 10.0%
!!! TCTACAATTAAATTGTATTT+TGG - chr3_4:70298694-70298713 None:intergenic 15.0%
!! ATATTTAATTAGAAAAGTCA+CGG + chr3_4:70298925-70298944 Msa0518490:intron 15.0%
!! AAATTTCAAAATCGAAATTT+GGG - chr3_4:70300336-70300355 None:intergenic 15.0%
!! TTATTCACTTAAATATCATA+CGG + chr3_4:70301102-70301121 Msa0518490:intron 15.0%
!! CAAAAAAATTCAAATATGTT+AGG - chr3_4:70301972-70301991 None:intergenic 15.0%
!! ATTTCTTTCTTAGTTTCAAA+GGG - chr3_4:70298840-70298859 None:intergenic 20.0%
!! AATTTCTTTCTTAGTTTCAA+AGG - chr3_4:70298841-70298860 None:intergenic 20.0%
!! TAATGTGTTCTTATTGTTAA+AGG + chr3_4:70299309-70299328 Msa0518490:intron 20.0%
!! AATATTTGAATAGTTATCTG+AGG - chr3_4:70299475-70299494 None:intergenic 20.0%
!! ATATGTAGACAGTAAATATT+TGG - chr3_4:70300304-70300323 None:intergenic 20.0%
!! CAAATTTCAAAATCGAAATT+TGG - chr3_4:70300337-70300356 None:intergenic 20.0%
!! TATTGAAATTATATCGATGA+AGG - chr3_4:70301020-70301039 None:intergenic 20.0%
!! TCATCGATATAATTTCAATA+TGG + chr3_4:70301020-70301039 Msa0518490:CDS 20.0%
!!! TAATTTGCCCAATTTTTATT+AGG + chr3_4:70301339-70301358 Msa0518490:intron 20.0%
!! GTTACTTCCTAATAAAAATT+GGG - chr3_4:70301349-70301368 None:intergenic 20.0%
!!! TGTTACTTCCTAATAAAAAT+TGG - chr3_4:70301350-70301369 None:intergenic 20.0%
!!! GACTTAAACTAAACAATTTT+TGG + chr3_4:70301991-70302010 Msa0518490:intron 20.0%
! AAAGGTCACAAATTTCTATA+CGG + chr3_4:70298178-70298197 Msa0518490:intron 25.0%
!!! AAATTGTATTTTGGACCTTT+TGG - chr3_4:70298685-70298704 None:intergenic 25.0%
! TCATTAATGAAATCACAACA+TGG + chr3_4:70298804-70298823 Msa0518490:intron 25.0%
! TTAAAAATGTGTCAAAGTGA+AGG + chr3_4:70299024-70299043 Msa0518490:intron 25.0%
! GACACATAATAAGATGAAAA+CGG - chr3_4:70299117-70299136 None:intergenic 25.0%
! ATTACTATATGATAGAGTGA+TGG - chr3_4:70299214-70299233 None:intergenic 25.0%
!! TGAGAAATTTTCTATCAAGA+TGG - chr3_4:70299832-70299851 None:intergenic 25.0%
!! TGAAATATGTTCATCTTTTC+CGG + chr3_4:70300073-70300092 Msa0518490:CDS 25.0%
!! TCAAGAATAGCTTTTCATTT+AGG + chr3_4:70300405-70300424 Msa0518490:intron 25.0%
!! CAAGAATAGCTTTTCATTTA+GGG + chr3_4:70300406-70300425 Msa0518490:intron 25.0%
!! AAGTAACTCATGATTTTTCA+TGG + chr3_4:70300826-70300845 Msa0518490:intron 25.0%
!! ATACATAAGAATAGCCATTT+TGG - chr3_4:70300938-70300957 None:intergenic 25.0%
! CTATTCTTATGTATGTACAT+TGG + chr3_4:70300944-70300963 Msa0518490:CDS 25.0%
! TCGATATAATTTCAATATGG+TGG + chr3_4:70301023-70301042 Msa0518490:CDS 25.0%
! AACAATATTGAGCAATCTTA+TGG - chr3_4:70301083-70301102 None:intergenic 25.0%
!!! GTACATCTTAGAACATTTTT+TGG - chr3_4:70301315-70301334 None:intergenic 25.0%
! CATTTAACTGAAGAAACTAA+AGG + chr3_4:70301576-70301595 Msa0518490:CDS 25.0%
! ATATCTTGAAGATATAGTCA+AGG + chr3_4:70301730-70301749 Msa0518490:intron 25.0%
!!! ATGCTTCAAAACTTATTTTC+AGG - chr3_4:70301791-70301810 None:intergenic 25.0%
! TTCCTAAAAAAAAAACAGCA+AGG - chr3_4:70301904-70301923 None:intergenic 25.0%
!!! GTTTTAATCATAAAGACATG+TGG + chr3_4:70302441-70302460 Msa0518490:intron 25.0%
!! TCTCAAATGAAACAATTTTC+AGG + chr3_4:70302494-70302513 Msa0518490:intron 25.0%
! TTCTTCCATAAGAATGAAAA+TGG - chr3_4:70302549-70302568 None:intergenic 25.0%
! AACTCTTTATCCTATTACAT+GGG + chr3_4:70302854-70302873 Msa0518490:CDS 25.0%
TCATCCAATAGTGGTTAAAA+AGG + chr3_4:70298160-70298179 Msa0518490:intron 30.0%
AAGGTCACAAATTTCTATAC+GGG + chr3_4:70298179-70298198 Msa0518490:intron 30.0%
TAAATACATGGTGTGTATCT+TGG - chr3_4:70298362-70298381 None:intergenic 30.0%
TCTCTTCTGACATAAATACA+TGG - chr3_4:70298374-70298393 None:intergenic 30.0%
GTATTTATGTCAGAAGAGAT+AGG + chr3_4:70298375-70298394 Msa0518490:intron 30.0%
AGAAGAATGCACAACATAAA+TGG + chr3_4:70298477-70298496 Msa0518490:intron 30.0%
! CTATTATTCATGTTTGGCTT+TGG - chr3_4:70298529-70298548 None:intergenic 30.0%
AGGCAACTATTATTCATGTT+TGG - chr3_4:70298535-70298554 None:intergenic 30.0%
AACATGAATAATAGTTGCCT+AGG + chr3_4:70298535-70298554 Msa0518490:intron 30.0%
AACTGGTTGAGAATATATCA+GGG - chr3_4:70298576-70298595 None:intergenic 30.0%
TAACTGGTTGAGAATATATC+AGG - chr3_4:70298577-70298596 None:intergenic 30.0%
! ATTTTGGATGTTCTGATAAC+TGG - chr3_4:70298593-70298612 None:intergenic 30.0%
!! AAGATAGTTCTGATAGAAAC+CGG + chr3_4:70298657-70298676 Msa0518490:intron 30.0%
GTGATTTCATTAATGAACCA+CGG - chr3_4:70298800-70298819 None:intergenic 30.0%
ATTAAGCGACAAAAATGAGT+TGG + chr3_4:70299262-70299281 Msa0518490:intron 30.0%
CTACTATATGTTTCAGTTGA+AGG - chr3_4:70299538-70299557 None:intergenic 30.0%
CTTCAACTGAAACATATAGT+AGG + chr3_4:70299536-70299555 Msa0518490:intron 30.0%
! TAGTTGTTTGTTTCTTCACT+TGG + chr3_4:70300030-70300049 Msa0518490:CDS 30.0%
! ATAGAAGTAGTACTTTTGTC+CGG + chr3_4:70300140-70300159 Msa0518490:intron 30.0%
CAGATAGTAGTAGTACTTTA+AGG + chr3_4:70300237-70300256 Msa0518490:intron 30.0%
!! AGCAGGAACAAAGTATTTTT+AGG - chr3_4:70300444-70300463 None:intergenic 30.0%
CTGTTAGATTGAATCAAAAG+TGG - chr3_4:70300501-70300520 None:intergenic 30.0%
! TAGTTTTTGCAAAATCTCGA+TGG + chr3_4:70300742-70300761 Msa0518490:intron 30.0%
! AACTCATGATTTTTCATGGT+TGG + chr3_4:70300830-70300849 Msa0518490:intron 30.0%
! ATGATTTTTCATGGTTGGAA+AGG + chr3_4:70300835-70300854 Msa0518490:intron 30.0%
TATAATTTCAATATGGTGGC+AGG + chr3_4:70301027-70301046 Msa0518490:CDS 30.0%
ACTTAAATATCATACGGTCA+CGG + chr3_4:70301108-70301127 Msa0518490:intron 30.0%
AACTCATAATATAAGTCGTC+TGG - chr3_4:70301165-70301184 None:intergenic 30.0%
! AATTTTCTGTGTCAGGTTAT+TGG + chr3_4:70301375-70301394 Msa0518490:intron 30.0%
AATGATAGAATCACTGCATA+TGG - chr3_4:70301513-70301532 None:intergenic 30.0%
! ATACTACCAAGTATTGCTAT+GGG - chr3_4:70301618-70301637 None:intergenic 30.0%
! AATACTACCAAGTATTGCTA+TGG - chr3_4:70301619-70301638 None:intergenic 30.0%
! ATAGCAATACTTGGTAGTAT+TGG + chr3_4:70301618-70301637 Msa0518490:CDS 30.0%
ATTGGCATCATTTCAGTATT+TGG + chr3_4:70301636-70301655 Msa0518490:CDS 30.0%
CATCATTTCAGTATTTGGAT+GGG + chr3_4:70301641-70301660 Msa0518490:CDS 30.0%
TTGATACCATCTTAGAACTT+TGG - chr3_4:70301879-70301898 None:intergenic 30.0%
!!! AGCCTTGCTGTTTTTTTTTT+AGG + chr3_4:70301899-70301918 Msa0518490:intron 30.0%
!!! ACTAAACAATTTTTGGCAGA+CGG + chr3_4:70301998-70302017 Msa0518490:intron 30.0%
CCTGAATCAAAGTTGAAAAA+TGG - chr3_4:70302037-70302056 None:intergenic 30.0%
!! CCATTTTTCAACTTTGATTC+AGG + chr3_4:70302034-70302053 Msa0518490:intron 30.0%
! TCAACTTTGATTCAGGATTT+TGG + chr3_4:70302041-70302060 Msa0518490:intron 30.0%
TCTCATTGTTTGGATCATAA+AGG - chr3_4:70302070-70302089 None:intergenic 30.0%
TAGTTCTCCTGTTTATCATT+TGG + chr3_4:70302165-70302184 Msa0518490:intron 30.0%
AGTTCTCCTGTTTATCATTT+GGG + chr3_4:70302166-70302185 Msa0518490:intron 30.0%
! GAGTTCCATTTTCATTCTTA+TGG + chr3_4:70302541-70302560 Msa0518490:CDS 30.0%
ACTACATTCACCTTCAAAAT+TGG - chr3_4:70302645-70302664 None:intergenic 30.0%
ATAACTTCAATAGCCACAAT+TGG + chr3_4:70302675-70302694 Msa0518490:CDS 30.0%
AGAAATGCTATCAAGCAAAT+TGG - chr3_4:70302798-70302817 None:intergenic 30.0%
! TTTGCTTGATAGCATTTCTA+TGG + chr3_4:70302799-70302818 Msa0518490:CDS 30.0%
CATGTAATAGGATAAAGAGT+TGG - chr3_4:70302855-70302874 None:intergenic 30.0%
CAACTCTTTATCCTATTACA+TGG + chr3_4:70302853-70302872 Msa0518490:CDS 30.0%
!! TTGAAAGTATCCCATGTAAT+AGG - chr3_4:70302867-70302886 None:intergenic 30.0%
AGATGCAAGAAAATGGTTTA+AGG + chr3_4:70302944-70302963 Msa0518490:CDS 30.0%
GATGCAAGAAAATGGTTTAA+GGG + chr3_4:70302945-70302964 Msa0518490:CDS 30.0%
ATGCAAGAAAATGGTTTAAG+GGG + chr3_4:70302946-70302965 Msa0518490:CDS 30.0%
! GTGACCTTTTTAACCACTAT+TGG - chr3_4:70298167-70298186 None:intergenic 35.0%
AGGTCACAAATTTCTATACG+GGG + chr3_4:70298180-70298199 Msa0518490:intron 35.0%
ATAAGCCAAATCTTACAAGC+CGG - chr3_4:70298219-70298238 None:intergenic 35.0%
CTTATCTTAAGTGAACAGAG+AGG + chr3_4:70298234-70298253 Msa0518490:intron 35.0%
ACATAAATGGCCATCATAGT+TGG + chr3_4:70298490-70298509 Msa0518490:intron 35.0%
TGAATAATAGTTGCCTAGGA+AGG + chr3_4:70298539-70298558 Msa0518490:intron 35.0%
TTGAGAATATATCAGGGTAC+AGG - chr3_4:70298570-70298589 None:intergenic 35.0%
TCAGAACATCCAAAATGCAA+CGG + chr3_4:70298597-70298616 Msa0518490:intron 35.0%
!! TATTTTGGACCTTTTGGTAC+CGG - chr3_4:70298679-70298698 None:intergenic 35.0%
TACGCTATGACCTATAATGA+TGG + chr3_4:70298762-70298781 Msa0518490:intron 35.0%
! GACCTATAATGATGGAGAAA+TGG + chr3_4:70298770-70298789 Msa0518490:intron 35.0%
GACCATTTCTCCATCATTAT+AGG - chr3_4:70298775-70298794 None:intergenic 35.0%
TCTATCTGACCTACTATCAT+GGG - chr3_4:70298951-70298970 None:intergenic 35.0%
TTCTATCTGACCTACTATCA+TGG - chr3_4:70298952-70298971 None:intergenic 35.0%
AACGGAATTTAACAAACCTG+CGG - chr3_4:70299099-70299118 None:intergenic 35.0%
TTGGCAAATTCAGTTGAATG+TGG - chr3_4:70299139-70299158 None:intergenic 35.0%
! TGTGCTTGACTTTTCTTTGT+TGG - chr3_4:70299158-70299177 None:intergenic 35.0%
AAGTGAAACCAAAGCAGAAA+AGG + chr3_4:70299357-70299376 Msa0518490:intron 35.0%
TCAGTTGAAGGATTCAAACT+TGG - chr3_4:70299526-70299545 None:intergenic 35.0%
AGTGACAGAAAACATAGCTA+TGG + chr3_4:70299732-70299751 Msa0518490:CDS 35.0%
GCAAGAACTAAGAAGAGAAA+TGG + chr3_4:70299792-70299811 Msa0518490:CDS 35.0%
!! TGTTTCTTCACTTGGTTTGT+TGG + chr3_4:70300038-70300057 Msa0518490:CDS 35.0%
!! GTTTCTTCACTTGGTTTGTT+GGG + chr3_4:70300039-70300058 Msa0518490:CDS 35.0%
CATGCATAAAAGAGACAAAC+CGG - chr3_4:70300095-70300114 None:intergenic 35.0%
GGTCAAACTTTGGATTATCA+GGG - chr3_4:70300181-70300200 None:intergenic 35.0%
TGGTCAAACTTTGGATTATC+AGG - chr3_4:70300182-70300201 None:intergenic 35.0%
TAATCCAAAGTTTGACCATG+AGG + chr3_4:70300184-70300203 Msa0518490:intron 35.0%
TTTACCTCATGGTCAAACTT+TGG - chr3_4:70300191-70300210 None:intergenic 35.0%
GATTCAATCTAACAGACAAC+TGG + chr3_4:70300506-70300525 Msa0518490:intron 35.0%
!! AACTGGTTCTCTGTACTTTT+GGG + chr3_4:70300523-70300542 Msa0518490:CDS 35.0%
GGTTAAACTTCGTGTATGTT+TGG + chr3_4:70300654-70300673 Msa0518490:intron 35.0%
AACTTCGTGTATGTTTGGAT+TGG + chr3_4:70300659-70300678 Msa0518490:intron 35.0%
! GGTGGGTTTGATAAAAATCA+CGG + chr3_4:70300683-70300702 Msa0518490:intron 35.0%
GAAAACACTGAGTACATGTT+TGG - chr3_4:70300788-70300807 None:intergenic 35.0%
AGTTTAATCCTACTCTCAAC+AGG + chr3_4:70300884-70300903 Msa0518490:CDS 35.0%
TAATATAAGTCGTCTGGTCT+TGG - chr3_4:70301159-70301178 None:intergenic 35.0%
GAATTAGCATCTGATACAAC+AGG + chr3_4:70301474-70301493 Msa0518490:CDS 35.0%
GCATCATTTCAGTATTTGGA+TGG + chr3_4:70301640-70301659 Msa0518490:CDS 35.0%
ACGAACACTTAGTCTCATAA+TGG + chr3_4:70301754-70301773 Msa0518490:intron 35.0%
TACCATCTTAGAACTTTGGT+TGG - chr3_4:70301875-70301894 None:intergenic 35.0%
!!! CTAAACAATTTTTGGCAGAC+GGG + chr3_4:70301999-70302018 Msa0518490:intron 35.0%
ATACTCTATGATGCATTCCA+TGG + chr3_4:70302116-70302135 Msa0518490:CDS 35.0%
CAGAATTGTGATATCTTCCA+TGG - chr3_4:70302136-70302155 None:intergenic 35.0%
GTTCTCCTGTTTATCATTTG+GGG + chr3_4:70302167-70302186 Msa0518490:intron 35.0%
ATGAACCCCAAATGATAAAC+AGG - chr3_4:70302175-70302194 None:intergenic 35.0%
! ATTTGGGGTTCATTCTTCTT+TGG + chr3_4:70302182-70302201 Msa0518490:intron 35.0%
TGGTAAGTACTAAACCTGTT+TGG + chr3_4:70302237-70302256 Msa0518490:intron 35.0%
GGTAAGTACTAAACCTGTTT+GGG + chr3_4:70302238-70302257 Msa0518490:intron 35.0%
! GTTTTGCAACTCGAATGAAT+CGG - chr3_4:70302264-70302283 None:intergenic 35.0%
!! CTTATTTCTATAAGCTCTCC+AGG + chr3_4:70302328-70302347 Msa0518490:intron 35.0%
! TCTGTTTTCATAAGCTATCC+TGG - chr3_4:70302349-70302368 None:intergenic 35.0%
! TTTGTAGGAACCTTGTGTTT+TGG - chr3_4:70302579-70302598 None:intergenic 35.0%
! TCTTGGTCTACCAATTTTGA+AGG + chr3_4:70302632-70302651 Msa0518490:CDS 35.0%
TTCAATAGCCACAATTGGAT+GGG + chr3_4:70302680-70302699 Msa0518490:CDS 35.0%
AGTTCCAATCTTTGCAAGAA+TGG + chr3_4:70302716-70302735 Msa0518490:CDS 35.0%
ATCACCATTCTTGCAAAGAT+TGG - chr3_4:70302723-70302742 None:intergenic 35.0%
!! AAGCCTGGACCTTTTTATTT+GGG + chr3_4:70302759-70302778 Msa0518490:CDS 35.0%
!! ATTATGCACCTGTTGCTTTA+TGG + chr3_4:70302886-70302905 Msa0518490:CDS 35.0%
!! TTATGCACCTGTTGCTTTAT+GGG + chr3_4:70302887-70302906 Msa0518490:CDS 35.0%
GTTTGGGTCTAATAATGCTT+TGG + chr3_4:70302913-70302932 Msa0518490:CDS 35.0%
GGGTATTAGATGCAAGAAAA+TGG + chr3_4:70302937-70302956 Msa0518490:CDS 35.0%
GACCAAAGTTCCAACTATGA+TGG - chr3_4:70298503-70298522 None:intergenic 40.0%
TCATAGTTGGAACTTTGGTC+TGG + chr3_4:70298503-70298522 Msa0518490:intron 40.0%
TGATAGAAACCGGTACCAAA+AGG + chr3_4:70298667-70298686 Msa0518490:intron 40.0%
AATGAAATCACAACATGGCC+AGG + chr3_4:70298809-70298828 Msa0518490:intron 40.0%
GAGGATATCTTTGACATGTC+AGG - chr3_4:70299066-70299085 None:intergenic 40.0%
! TACTTGCTCCTTTTCTGCTT+TGG - chr3_4:70299368-70299387 None:intergenic 40.0%
!! ATCTGAGGCAGTATTTTCTC+AGG - chr3_4:70299460-70299479 None:intergenic 40.0%
TCAACAGAACCCTTGTTACA+TGG + chr3_4:70299684-70299703 Msa0518490:CDS 40.0%
CAACAGAACCCTTGTTACAT+GGG + chr3_4:70299685-70299704 Msa0518490:CDS 40.0%
AACAGAACCCTTGTTACATG+GGG + chr3_4:70299686-70299705 Msa0518490:CDS 40.0%
TTTCAGTCCCCATGTAACAA+GGG - chr3_4:70299696-70299715 None:intergenic 40.0%
!!! GACTGAAACCAGTTTTGTTC+CGG + chr3_4:70299708-70299727 Msa0518490:CDS 40.0%
!! GCTATGTTTTCTGTCACTTC+CGG - chr3_4:70299730-70299749 None:intergenic 40.0%
GAGAAGAGACTAAATGAGCT+TGG + chr3_4:70299763-70299782 Msa0518490:CDS 40.0%
! TCAACAATGACGCTTTTCAC+TGG + chr3_4:70299942-70299961 Msa0518490:CDS 40.0%
!! TTGGTTTGTTGGGATTGCAA+TGG + chr3_4:70300049-70300068 Msa0518490:CDS 40.0%
ATTATCAGGGTTCCATTCTC+AGG - chr3_4:70300168-70300187 None:intergenic 40.0%
TAGAACAGTCGTTTACCTCA+TGG - chr3_4:70300202-70300221 None:intergenic 40.0%
!! CAACTGGTTCTCTGTACTTT+TGG + chr3_4:70300522-70300541 Msa0518490:CDS 40.0%
ACATTTAGCTGGTCCGAAAT+GGG + chr3_4:70300550-70300569 Msa0518490:CDS 40.0%
GAAGAAAATGGTCCCCATTT+CGG - chr3_4:70300566-70300585 None:intergenic 40.0%
! AATGGGGACCATTTTCTTCA+TGG + chr3_4:70300567-70300586 Msa0518490:CDS 40.0%
GCACAACACCATGAAGAAAA+TGG - chr3_4:70300578-70300597 None:intergenic 40.0%
!! TTTCTTCATGGTGTTGTGCT+TGG + chr3_4:70300579-70300598 Msa0518490:CDS 40.0%
!! GTAGGTCTTATTGCTGGAAT+CGG + chr3_4:70300611-70300630 Msa0518490:intron 40.0%
! TTCGTGTATGTTTGGATTGG+TGG + chr3_4:70300662-70300681 Msa0518490:intron 40.0%
!! TGTATGTTTGGATTGGTGGT+GGG + chr3_4:70300666-70300685 Msa0518490:intron 40.0%
GGGTTTGATAAAAATCACGG+TGG + chr3_4:70300686-70300705 Msa0518490:intron 40.0%
GCAAAATCTCGATGGTTCAT+CGG + chr3_4:70300750-70300769 Msa0518490:intron 40.0%
CAAAATCTCGATGGTTCATC+GGG + chr3_4:70300751-70300770 Msa0518490:intron 40.0%
TATTTGTGCCTGTTGAGAGT+AGG - chr3_4:70300895-70300914 None:intergenic 40.0%
CTCTCAACAGGCACAAATAA+AGG + chr3_4:70300896-70300915 Msa0518490:CDS 40.0%
TCAACAGGCACAAATAAAGG+CGG + chr3_4:70300899-70300918 Msa0518490:CDS 40.0%
! ACATTGGCCTCACTGTTATA+TGG + chr3_4:70300960-70300979 Msa0518490:CDS 40.0%
! CATTGGCCTCACTGTTATAT+GGG + chr3_4:70300961-70300980 Msa0518490:CDS 40.0%
GAGCAATCTTATGGCAGTTA+TGG - chr3_4:70301074-70301093 None:intergenic 40.0%
GGGAGCAATTAGATAAGGAT+CGG - chr3_4:70301229-70301248 None:intergenic 40.0%
CAAGTGGGAGCAATTAGATA+AGG - chr3_4:70301234-70301253 None:intergenic 40.0%
! CACACTCAATTTTCTGTGTC+AGG + chr3_4:70301368-70301387 Msa0518490:intron 40.0%
TTTCTGTGTCAGGTTATTGG+TGG + chr3_4:70301378-70301397 Msa0518490:intron 40.0%
GATAGTGATACTGTTACCTC+TGG + chr3_4:70301407-70301426 Msa0518490:CDS 40.0%
CATATCCATAGAGGGAATAC+TGG - chr3_4:70301545-70301564 None:intergenic 40.0%
TGCAGCATCATATCCATAGA+GGG - chr3_4:70301553-70301572 None:intergenic 40.0%
! ACTAAAGGTGCAGACAAGAA+TGG + chr3_4:70301591-70301610 Msa0518490:CDS 40.0%
AATGGACCCATAGCAATACT+TGG + chr3_4:70301609-70301628 Msa0518490:CDS 40.0%
! ATTTGGATGGGCTTACATCT+TGG + chr3_4:70301653-70301672 Msa0518490:CDS 40.0%
!! TAGAACTTTGGTTGGCCTAA+TGG - chr3_4:70301867-70301886 None:intergenic 40.0%
! GCATCATAGAGTATTTGTGC+TGG - chr3_4:70302110-70302129 None:intergenic 40.0%
GGAAGATATCACAATTCTGC+TGG + chr3_4:70302137-70302156 Msa0518490:CDS 40.0%
TTTAGTACTTACCACTCTGG+CGG - chr3_4:70302231-70302250 None:intergenic 40.0%
AGGTTTAGTACTTACCACTC+TGG - chr3_4:70302234-70302253 None:intergenic 40.0%
AAAATGCCTCCTAACTAGTG+TGG + chr3_4:70302467-70302486 Msa0518490:intron 40.0%
TGAGATACACCACACTAGTT+AGG - chr3_4:70302479-70302498 None:intergenic 40.0%
GAAACTGCATCCAAAACACA+AGG + chr3_4:70302566-70302585 Msa0518490:CDS 40.0%
AGGTTCCTACAAATGCTGTA+TGG + chr3_4:70302586-70302605 Msa0518490:CDS 40.0%
CTTCAATAGCCACAATTGGA+TGG + chr3_4:70302679-70302698 Msa0518490:CDS 40.0%
! CAAGCCTGGACCTTTTTATT+TGG + chr3_4:70302758-70302777 Msa0518490:CDS 40.0%
TTGCCCAAATAAAAAGGTCC+AGG - chr3_4:70302765-70302784 None:intergenic 40.0%
!! TGGACCTTTTTATTTGGGCA+AGG + chr3_4:70302764-70302783 Msa0518490:CDS 40.0%
CTTGCCTTGCCCAAATAAAA+AGG - chr3_4:70302771-70302790 None:intergenic 40.0%
TAGGATAAAGAGTTGGCAAC+AGG - chr3_4:70302848-70302867 None:intergenic 40.0%
TGGGTCTAATAATGCTTTGG+TGG + chr3_4:70302916-70302935 Msa0518490:CDS 40.0%
GGGTCTAATAATGCTTTGGT+GGG + chr3_4:70302917-70302936 Msa0518490:CDS 40.0%
TGAGCATCAATGTTCCTAAC+TGG - chr3_4:70302972-70302991 None:intergenic 40.0%
! TTCTATACGGGGCTTTTGCA+AGG + chr3_4:70298191-70298210 Msa0518490:intron 45.0%
GAAGAGATAGGTCAGCATCA+AGG + chr3_4:70298387-70298406 Msa0518490:intron 45.0%
! GCTCTGCTGCATCTTTTTCT+TGG - chr3_4:70298415-70298434 None:intergenic 45.0%
GGCCATCATAGTTGGAACTT+TGG + chr3_4:70298498-70298517 Msa0518490:intron 45.0%
GGTACAGGATTATCCTTCCT+AGG - chr3_4:70298555-70298574 None:intergenic 45.0%
! GCTGTTGTTCCGTTGCATTT+TGG - chr3_4:70298609-70298628 None:intergenic 45.0%
ATCCTCACTACTTATACCGC+AGG + chr3_4:70299080-70299099 Msa0518490:intron 45.0%
AACCTGCGGTATAAGTAGTG+AGG - chr3_4:70299085-70299104 None:intergenic 45.0%
GTTTCAGTCCCCATGTAACA+AGG - chr3_4:70299697-70299716 None:intergenic 45.0%
! TGTCACTTCCGGAACAAAAC+TGG - chr3_4:70299719-70299738 None:intergenic 45.0%
ACTGGAATCACACCTCTGTA+TGG + chr3_4:70299960-70299979 Msa0518490:CDS 45.0%
AGAAGGCTAGAACCATACAG+AGG - chr3_4:70299975-70299994 None:intergenic 45.0%
ATCCCCAAACAAGACTTGCA+GGG - chr3_4:70300007-70300026 None:intergenic 45.0%
!! TGCAAGTCTTGTTTGGGGAT+GGG + chr3_4:70300007-70300026 Msa0518490:CDS 45.0%
! TTTTGTCCGGTTCCTGAGAA+TGG + chr3_4:70300153-70300172 Msa0518490:intron 45.0%
GGTAAACGACTGTTCTAGTC+AGG + chr3_4:70300205-70300224 Msa0518490:intron 45.0%
!! TTCACTGATTCATGTGCAGC+AGG - chr3_4:70300461-70300480 None:intergenic 45.0%
! TTTTGGGCTGCACATTTAGC+TGG + chr3_4:70300539-70300558 Msa0518490:CDS 45.0%
CACATTTAGCTGGTCCGAAA+TGG + chr3_4:70300549-70300568 Msa0518490:CDS 45.0%
CATTTAGCTGGTCCGAAATG+GGG + chr3_4:70300551-70300570 Msa0518490:CDS 45.0%
!! GAGACTGTAGGTCTTATTGC+TGG + chr3_4:70300605-70300624 Msa0518490:intron 45.0%
TATTGCTGGAATCGGTACTC+AGG + chr3_4:70300619-70300638 Msa0518490:intron 45.0%
! GTACTCAGGTAAGTGGACTT+TGG + chr3_4:70300633-70300652 Msa0518490:intron 45.0%
!! GTGTATGTTTGGATTGGTGG+TGG + chr3_4:70300665-70300684 Msa0518490:intron 45.0%
!! GAGGGTACTTTGCTCCAAAA+TGG + chr3_4:70300921-70300940 Msa0518490:CDS 45.0%
ATGCTGCCCATATAACAGTG+AGG - chr3_4:70300970-70300989 None:intergenic 45.0%
! GTTCAACGGTTCTGATTGAC+TGG - chr3_4:70301137-70301156 None:intergenic 45.0%
! TTGCTCCCACTTGCTGATAA+CGG + chr3_4:70301241-70301260 Msa0518490:intron 45.0%
CTTCACCGTTATCAGCAAGT+GGG - chr3_4:70301249-70301268 None:intergenic 45.0%
ACTTCACCGTTATCAGCAAG+TGG - chr3_4:70301250-70301269 None:intergenic 45.0%
!! TTGCTGATAACGGTGAAGTG+TGG + chr3_4:70301251-70301270 Msa0518490:intron 45.0%
AGTGATACTGTTACCTCTGG+TGG + chr3_4:70301410-70301429 Msa0518490:CDS 45.0%
TGTTTAGTTAGTGCCACCAG+AGG - chr3_4:70301426-70301445 None:intergenic 45.0%
CTGCAGCATCATATCCATAG+AGG - chr3_4:70301554-70301573 None:intergenic 45.0%
GGCACTTACATTCAGCATTC+AGG + chr3_4:70301674-70301693 Msa0518490:CDS 45.0%
GTGGCTCAATGAATCTTGCA+TGG - chr3_4:70301826-70301845 None:intergenic 45.0%
!! GGCCAACCAAAGTTCTAAGA+TGG + chr3_4:70301870-70301889 Msa0518490:intron 45.0%
GATCCAAACAATGAGACAGC+TGG + chr3_4:70302074-70302093 Msa0518490:CDS 45.0%
TGGGGTTCATTCTTCTTTGG+TGG + chr3_4:70302185-70302204 Msa0518490:intron 45.0%
GATACACCACACTAGTTAGG+AGG - chr3_4:70302476-70302495 None:intergenic 45.0%
TATGCCCTGTCAAGGGATAA+GGG + chr3_4:70302519-70302538 Msa0518490:CDS 45.0%
AACTCCCTTATCCCTTGACA+GGG - chr3_4:70302526-70302545 None:intergenic 45.0%
CAGAGCCATACAGCATTTGT+AGG - chr3_4:70302594-70302613 None:intergenic 45.0%
GCAGCAATCTGCATTCTTCT+TGG + chr3_4:70302615-70302634 Msa0518490:CDS 45.0%
ATAGCCACAATTGGATGGGT+TGG + chr3_4:70302684-70302703 Msa0518490:CDS 45.0%
AAACCGACCCATAAAGCAAC+AGG - chr3_4:70302897-70302916 None:intergenic 45.0%
!! TGTTGCTTTATGGGTCGGTT+TGG + chr3_4:70302896-70302915 Msa0518490:CDS 45.0%
! GTTGCTTTATGGGTCGGTTT+GGG + chr3_4:70302897-70302916 Msa0518490:CDS 45.0%
AATGGTTTAAGGGGCCAGTT+AGG + chr3_4:70302955-70302974 Msa0518490:CDS 45.0%
!! AGGCACCGGCTTGTAAGATT+TGG + chr3_4:70298211-70298230 Msa0518490:intron 50.0%
GATGGAGAAATGGTCAACCG+TGG + chr3_4:70298780-70298799 Msa0518490:intron 50.0%
TAGTTTCAAAGGGACGTGCC+TGG - chr3_4:70298830-70298849 None:intergenic 50.0%
AAGTCACGGCCCATGATAGT+AGG + chr3_4:70298939-70298958 Msa0518490:intron 50.0%
GTGAGTGACGCATTCATGTG+TGG + chr3_4:70299425-70299444 Msa0518490:intron 50.0%
! GGTTCTAGCCTTCTGTATGC+AGG + chr3_4:70299981-70300000 Msa0518490:CDS 50.0%
!! AGGCCCTGCAAGTCTTGTTT+GGG + chr3_4:70300001-70300020 Msa0518490:CDS 50.0%
CATCCCCAAACAAGACTTGC+AGG - chr3_4:70300008-70300027 None:intergenic 50.0%
!! CTGCAAGTCTTGTTTGGGGA+TGG + chr3_4:70300006-70300025 Msa0518490:CDS 50.0%
AGGGTTCCATTCTCAGGAAC+CGG - chr3_4:70300162-70300181 None:intergenic 50.0%
! TGTGCTTGGCTTGAGACTGT+AGG + chr3_4:70300593-70300612 Msa0518490:intron 50.0%
GGAATCGGTACTCAGGTAAG+TGG + chr3_4:70300626-70300645 Msa0518490:intron 50.0%
! ATGGTTGGAAAGGCGTATGC+AGG + chr3_4:70300845-70300864 Msa0518490:intron 50.0%
ACAGGCACAAATAAAGGCGG+AGG + chr3_4:70300902-70300921 Msa0518490:CDS 50.0%
CAGGCACAAATAAAGGCGGA+GGG + chr3_4:70300903-70300922 Msa0518490:CDS 50.0%
!! GTCGTCTGGTCTTGGTTCAA+CGG - chr3_4:70301151-70301170 None:intergenic 50.0%
AAGTGTGGTATCGTGACTGC+AGG + chr3_4:70301266-70301285 Msa0518490:intron 50.0%
GTGAGCCAGTATTCCCTCTA+TGG + chr3_4:70301537-70301556 Msa0518490:intron 50.0%
GCAAGTGACTCGATGCTATG+TGG - chr3_4:70301845-70301864 None:intergenic 50.0%
GCATCGAGTCACTTGCCATT+AGG + chr3_4:70301849-70301868 Msa0518490:intron 50.0%
GCTCCAGCTGTCTCATTGTT+TGG - chr3_4:70302080-70302099 None:intergenic 50.0%
TCGAATGAATCGGCCCAAAC+AGG - chr3_4:70302254-70302273 None:intergenic 50.0%
TTCAGGTCTATGCCCTGTCA+AGG + chr3_4:70302511-70302530 Msa0518490:intron 50.0%
TCAGGTCTATGCCCTGTCAA+GGG + chr3_4:70302512-70302531 Msa0518490:intron 50.0%
CTATGCCCTGTCAAGGGATA+AGG + chr3_4:70302518-70302537 Msa0518490:CDS 50.0%
GAACTCCCTTATCCCTTGAC+AGG - chr3_4:70302527-70302546 None:intergenic 50.0%
ACCACCAACCCATCCAATTG+TGG - chr3_4:70302691-70302710 None:intergenic 50.0%
CCAGGCTTGAAGTTCTTCTC+AGG - chr3_4:70302747-70302766 None:intergenic 50.0%
CCTGAGAAGAACTTCAAGCC+TGG + chr3_4:70302744-70302763 Msa0518490:CDS 50.0%
!! GCACCTGTTGCTTTATGGGT+CGG + chr3_4:70302891-70302910 Msa0518490:CDS 50.0%
TTGCAGGGCCTGCATACAGA+AGG - chr3_4:70299992-70300011 None:intergenic 55.0%
!! CAGGCCCTGCAAGTCTTGTT+TGG + chr3_4:70300000-70300019 Msa0518490:CDS 55.0%
!! GGCCCTGCAAGTCTTGTTTG+GGG + chr3_4:70300002-70300021 Msa0518490:CDS 55.0%
!! GCCACAATTGGATGGGTTGG+TGG + chr3_4:70302687-70302706 Msa0518490:CDS 55.0%
! ACGGGGCTTTTGCAAGGCAC+CGG + chr3_4:70298197-70298216 Msa0518490:intron 60.0%
! CACTACAAGTGCCGCCAGAG+TGG + chr3_4:70302217-70302236 Msa0518490:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 70298154 70303007 70298154 ID=Msa0518490;Name=Msa0518490
chr3_4 mRNA 70298154 70303007 70298154 ID=Msa0518490-mRNA-1;Parent=Msa0518490;Name=Msa0518490-mRNA-1;_AED=0.24;_eAED=0.25;_QI=0|0|0|1|0.62|0.44|9|0|509
chr3_4 exon 70298154 70298172 70298154 ID=Msa0518490-mRNA-1:exon:19029;Parent=Msa0518490-mRNA-1
chr3_4 exon 70299668 70299813 70299668 ID=Msa0518490-mRNA-1:exon:19030;Parent=Msa0518490-mRNA-1
chr3_4 exon 70299912 70300094 70299912 ID=Msa0518490-mRNA-1:exon:19031;Parent=Msa0518490-mRNA-1
chr3_4 exon 70300521 70300610 70300521 ID=Msa0518490-mRNA-1:exon:19032;Parent=Msa0518490-mRNA-1
chr3_4 exon 70300857 70301048 70300857 ID=Msa0518490-mRNA-1:exon:19033;Parent=Msa0518490-mRNA-1
chr3_4 exon 70301390 70301536 70301390 ID=Msa0518490-mRNA-1:exon:19034;Parent=Msa0518490-mRNA-1
chr3_4 exon 70301546 70301695 70301546 ID=Msa0518490-mRNA-1:exon:19035;Parent=Msa0518490-mRNA-1
chr3_4 exon 70302056 70302166 70302056 ID=Msa0518490-mRNA-1:exon:19036;Parent=Msa0518490-mRNA-1
chr3_4 exon 70302516 70303007 70302516 ID=Msa0518490-mRNA-1:exon:19037;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70298154 70298172 70298154 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70299668 70299813 70299668 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70299912 70300094 70299912 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70300521 70300610 70300521 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70300857 70301048 70300857 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70301390 70301536 70301390 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70301546 70301695 70301546 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70302056 70302166 70302056 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
chr3_4 CDS 70302516 70303007 70302516 ID=Msa0518490-mRNA-1:cds;Parent=Msa0518490-mRNA-1
Gene Sequence

>Msa0518490

ATGAATTCATCCAATAGTGATTACGTAAGAACTTCTCAACAGAACCCTTGTTACATGGGGACTGAAACCAGTTTTGTTCCGGAAGTGACAGAAAACATAGCTATGGATTCAGCAGAGAAGAGACTAAATGAGCTTGGTTACAAGCAAGAACTAAGAAGAGAAATGACTATGTTCAAAACTCTTGCGATAGCATTTTCAACAATGACGCTTTTCACTGGAATCACACCTCTGTATGGTTCTAGCCTTCTGTATGCAGGCCCTGCAAGTCTTGTTTGGGGATGGGTAGTTGTTTGTTTCTTCACTTGGTTTGTTGGGATTGCAATGGCTGAAATATGTTCATCTTTTCCGACAACTGGTTCTCTGTACTTTTGGGCTGCACATTTAGCTGGTCCGAAATGGGGACCATTTTCTTCATGGTGTTGTGCTTGGCTTGAGACTGCGTATGCAGGATCACAAACATTGCAGAGTTTAATCCTACTCTCAACAGGCACAAATAAAGGCGGAGGGTACTTTGCTCCAAAATGGCTATTCTTATGTATGTACATTGGCCTCACTGTTATATGGGCAGCATTAAACACATTTGCATTAGAAGTCATTGCCTTCATCGATATAATTTCAATATGGTGGCAGGTTATTGGTGGAGCAGTGATAGTGATACTGTTACCTCTGGTGGCACTAACTAAACAATCAGCTACATATGTATTCACAAACTTTGAATTAGCATCTGATACAACAGGAGTTTCAAGCAAACCATATGCAGTGATTCTATCATTTCTTTATTCCCTCTATGGATATGATGCTGCAGCACATTTAACTGAAGAAACTAAAGGTGCAGACAAGAATGGACCCATAGCAATACTTGGTAGTATTGGCATCATTTCAGTATTTGGATGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGATTTTGGTTACCTTTATGATCCAAACAATGAGACAGCTGGAGCATTTGTGCCAGCACAAATACTCTATGATGCATTCCATGGAAGATATCACAATTCTGCTGGAGCAATAGTCTATGCCCTGTCAAGGGATAAGGGAGTTCCATTTTCATTCTTATGGAAGAAACTGCATCCAAAACACAAGGTTCCTACAAATGCTGTATGGCTCTGTGCAGCAATCTGCATTCTTCTTGGTCTACCAATTTTGAAGGTGAATGTAGTCTTTACTGCAATAACTTCAATAGCCACAATTGGATGGGTTGGTGGTTATGCAGTTCCAATCTTTGCAAGAATGGTGATGCCTGAGAAGAACTTCAAGCCTGGACCTTTTTATTTGGGCAAGGCAAGCAGACCAATTTGCTTGATAGCATTTCTATGGATTTGTTACACATGTTCTGTATTCCTGTTGCCAACTCTTTATCCTATTACATGGGATACTTTCAATTATGCACCTGTTGCTTTATGGGTCGGTTTGGGTCTAATAATGCTTTGGTGGGTATTAGATGCAAGAAAATGGTTTAAGGGGCCAGTTAGGAACATTGATGCTCAAAATGACAAAGTATAA

Protein sequence

>Msa0518490

MNSSNSDYVRTSQQNPCYMGTETSFVPEVTENIAMDSAEKRLNELGYKQELRREMTMFKTLAIAFSTMTLFTGITPLYGSSLLYAGPASLVWGWVVVCFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETAYAGSQTLQSLILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVIGGAVIVILLPLVALTKQSATYVFTNFELASDTTGVSSKPYAVILSFLYSLYGYDAAAHLTEETKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQILYDAFHGRYHNSAGAIVYALSRDKGVPFSFLWKKLHPKHKVPTNAVWLCAAICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMVMPEKNFKPGPFYLGKASRPICLIAFLWICYTCSVFLLPTLYPITWDTFNYAPVALWVGLGLIMLWWVLDARKWFKGPVRNIDAQNDKV*