AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0976400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0976400 MtrunA17_Chr6g0455481 95.238 336 16 0 1 336 4 339 0.0 674
Msa0976400 MtrunA17_Chr7g0220011 64.048 331 118 1 1 331 1 330 2.81e-161 455
Msa0976400 MtrunA17_Chr7g0220001 60.725 331 129 1 1 331 3 332 4.18e-149 424
Msa0976400 MtrunA17_Chr1g0184161 47.720 329 166 4 1 326 1 326 5.46e-108 320
Msa0976400 MtrunA17_Chr1g0184101 48.624 327 161 5 3 325 2 325 2.26e-105 313
Msa0976400 MtrunA17_Chr1g0184121 47.164 335 170 5 3 333 2 333 1.30e-103 309
Msa0976400 MtrunA17_Chr1g0184151 44.681 329 176 4 1 326 1 326 4.84e-102 305
Msa0976400 MtrunA17_Chr1g0184111 46.567 335 172 5 3 333 2 333 7.16e-102 305
Msa0976400 MtrunA17_Chr3g0128001 36.697 327 203 3 1 326 1 324 2.10e-72 229
Msa0976400 MtrunA17_Chr8g0345831 35.756 344 209 6 5 343 7 343 5.05e-70 223
Msa0976400 MtrunA17_Chr7g0242551 37.462 331 188 7 14 328 24 351 1.16e-66 215
Msa0976400 MtrunA17_Chr4g0006371 37.353 340 185 7 14 328 23 359 1.20e-66 215
Msa0976400 MtrunA17_Chr5g0437181 37.870 338 192 6 4 328 13 345 4.32e-66 213
Msa0976400 MtrunA17_Chr7g0225881 38.080 323 180 10 16 327 45 358 2.23e-63 207
Msa0976400 MtrunA17_Chr3g0113641 35.143 350 205 8 4 336 14 358 5.31e-59 195
Msa0976400 MtrunA17_Chr5g0412651 35.692 325 190 8 15 326 14 332 1.11e-58 194
Msa0976400 MtrunA17_Chr5g0412671 34.897 341 200 8 6 329 1 336 3.82e-58 192
Msa0976400 MtrunA17_Chr6g0472861 36.254 331 188 10 14 327 37 361 4.11e-58 193
Msa0976400 MtrunA17_Chr2g0311701 36.593 317 173 10 29 327 58 364 2.70e-57 191
Msa0976400 MtrunA17_Chr5g0412681 35.048 311 185 7 27 329 21 322 4.20e-57 189
Msa0976400 MtrunA17_Chr2g0311741 38.158 304 167 10 35 327 23 316 6.91e-57 188
Msa0976400 MtrunA17_Chr1g0162361 36.137 321 182 8 16 319 4 318 1.39e-56 188
Msa0976400 MtrunA17_Chr8g0336761 36.842 304 174 7 35 327 56 352 2.13e-56 188
Msa0976400 MtrunA17_Chr7g0235951 35.671 328 189 8 14 327 42 361 2.98e-56 188
Msa0976400 MtrunA17_Chr1g0184241 35.294 323 190 9 14 327 43 355 1.26e-55 186
Msa0976400 MtrunA17_Chr7g0265221 34.356 326 189 6 16 319 38 360 3.82e-55 186
Msa0976400 MtrunA17_Chr1g0179801 34.483 319 191 6 16 319 38 353 4.15e-55 185
Msa0976400 MtrunA17_Chr4g0055591 36.120 299 179 6 35 327 57 349 5.97e-55 184
Msa0976400 MtrunA17_Chr7g0239101 33.861 316 197 7 14 322 29 339 6.29e-55 184
Msa0976400 MtrunA17_Chr8g0354261 35.691 311 180 8 30 327 59 362 7.72e-55 185
Msa0976400 MtrunA17_Chr4g0045411 35.093 322 181 11 20 320 12 326 1.04e-54 183
Msa0976400 MtrunA17_Chr7g0250511 35.783 313 190 6 14 319 23 331 2.16e-54 182
Msa0976400 MtrunA17_Chr8g0364471 36.656 311 171 10 33 327 61 361 4.09e-54 182
Msa0976400 MtrunA17_Chr7g0219991 56.494 154 64 2 1 152 1 153 4.64e-54 182
Msa0976400 MtrunA17_Chr7g0219991 63.208 106 39 0 153 258 249 354 3.15e-42 151
Msa0976400 MtrunA17_Chr7g0239111 32.765 293 184 7 36 321 52 338 4.67e-54 182
Msa0976400 MtrunA17_Chr8g0371931 33.529 340 212 7 15 345 15 349 7.11e-54 182
Msa0976400 MtrunA17_Chr3g0109041 34.743 331 192 11 14 328 19 341 7.98e-54 181
Msa0976400 MtrunA17_Chr5g0423191 33.140 344 211 10 13 348 21 353 8.97e-54 181
Msa0976400 MtrunA17_Chr2g0311761 34.985 323 193 7 16 327 44 360 1.10e-53 181
Msa0976400 MtrunA17_Chr8g0375601 31.356 354 218 9 14 353 20 362 2.24e-53 181
Msa0976400 MtrunA17_Chr2g0311681 36.842 304 165 9 35 321 59 352 4.86e-53 180
Msa0976400 MtrunA17_Chr8g0348081 34.754 305 179 7 35 327 56 352 5.84e-53 179
Msa0976400 MtrunA17_Chr8g0371921 32.941 340 214 7 15 345 15 349 6.38e-53 179
Msa0976400 MtrunA17_Chr8g0336781 35.484 310 177 9 32 327 88 388 8.02e-53 180
Msa0976400 MtrunA17_Chr5g0405411 33.333 330 204 9 4 323 5 328 9.65e-53 179
Msa0976400 MtrunA17_Chr3g0125201 34.277 318 177 9 38 335 2 307 1.14e-52 177
Msa0976400 MtrunA17_Chr8g0354241 35.144 313 179 9 30 327 59 362 1.47e-52 179
Msa0976400 MtrunA17_Chr2g0311711 35.714 308 166 9 38 327 66 359 1.87e-52 178
Msa0976400 MtrunA17_Chr1g0187831 34.628 309 179 10 32 326 62 361 2.00e-52 179
Msa0976400 MtrunA17_Chr1g0187811 33.333 312 185 9 30 327 179 481 2.62e-52 181
Msa0976400 MtrunA17_Chr8g0336751 36.957 276 156 7 52 319 112 377 3.51e-52 178
Msa0976400 MtrunA17_Chr1g0187821 34.043 329 194 9 13 327 39 358 5.50e-52 177
Msa0976400 MtrunA17_Chr4g0045441 34.234 333 180 12 16 319 4 326 6.22e-52 176
Msa0976400 MtrunA17_Chr7g0239821 32.423 293 185 7 36 321 61 347 7.01e-52 177
Msa0976400 MtrunA17_Chr2g0311691 37.209 301 162 9 38 321 62 352 1.04e-51 176
Msa0976400 MtrunA17_Chr7g0239121 33.673 294 181 8 36 321 48 335 1.48e-51 176
Msa0976400 MtrunA17_Chr2g0311921 35.077 325 190 11 16 327 30 346 2.37e-51 175
Msa0976400 MtrunA17_Chr8g0336851 33.981 309 182 8 32 327 53 352 3.36e-51 175
Msa0976400 MtrunA17_Chr4g0066121 35.135 296 169 8 38 319 59 345 6.64e-51 174
Msa0976400 MtrunA17_Chr8g0375671 33.143 350 211 9 14 351 27 365 7.13e-51 174
Msa0976400 MtrunA17_Chr5g0421011 33.333 342 203 11 16 346 24 351 1.23e-50 173
Msa0976400 MtrunA17_Chr8g0336861 33.438 320 189 9 30 332 51 363 1.29e-50 173
Msa0976400 MtrunA17_Chr3g0145171 33.651 315 190 8 27 329 40 347 2.89e-50 172
Msa0976400 MtrunA17_Chr1g0162351 33.232 328 184 12 20 319 51 371 8.38e-50 172
Msa0976400 MtrunA17_Chr2g0296371 31.014 345 219 9 15 348 27 363 8.56e-50 171
Msa0976400 MtrunA17_Chr5g0426891 31.073 354 215 10 3 343 5 342 1.13e-49 170
Msa0976400 MtrunA17_Chr5g0423251 30.409 342 221 9 13 347 21 352 1.34e-49 170
Msa0976400 MtrunA17_Chr5g0421041 31.487 343 216 10 13 348 21 351 2.35e-49 169
Msa0976400 MtrunA17_Chr8g0336631 34.967 306 178 9 35 327 56 353 2.55e-49 170
Msa0976400 MtrunA17_Chr1g0162321 32.622 328 186 11 20 319 51 371 4.06e-49 170
Msa0976400 MtrunA17_Chr3g0087031 33.127 323 193 9 32 343 50 360 4.13e-49 169
Msa0976400 MtrunA17_Chr7g0239071 35.206 267 160 6 62 322 25 284 7.74e-49 167
Msa0976400 MtrunA17_Chr2g0289341 33.442 308 183 8 39 333 4 302 1.21e-48 167
Msa0976400 MtrunA17_Chr3g0102041 33.962 318 193 9 15 321 15 326 1.62e-48 167
Msa0976400 MtrunA17_Chr7g0266651 34.012 344 201 12 15 345 34 364 2.05e-48 167
Msa0976400 MtrunA17_Chr8g0375571 33.228 316 188 8 14 315 20 326 4.80e-48 166
Msa0976400 MtrunA17_Chr3g0126741 33.893 298 181 7 31 319 51 341 9.26e-48 166
Msa0976400 MtrunA17_Chr2g0314381 31.988 322 204 7 14 326 52 367 2.02e-47 165
Msa0976400 MtrunA17_Chr8g0335411 37.459 307 170 9 35 327 63 361 2.16e-47 165
Msa0976400 MtrunA17_Chr3g0114861 32.390 318 208 5 16 329 17 331 4.42e-47 163
Msa0976400 MtrunA17_Chr8g0375701 32.399 321 200 7 15 326 30 342 6.67e-47 163
Msa0976400 MtrunA17_Chr8g0370711 31.190 311 203 5 27 329 40 347 7.79e-47 163
Msa0976400 MtrunA17_Chr2g0311631 32.198 323 196 8 16 324 33 346 9.05e-47 163
Msa0976400 MtrunA17_Chr4g0045431 32.508 323 193 10 19 319 7 326 9.54e-47 162
Msa0976400 MtrunA17_Chr2g0311831 33.129 326 194 9 16 327 44 359 1.27e-46 163
Msa0976400 MtrunA17_Chr2g0311861 35.294 323 171 11 16 327 40 335 1.50e-46 162
Msa0976400 MtrunA17_Chr5g0424201 30.650 323 215 6 3 319 7 326 2.26e-46 161
Msa0976400 MtrunA17_Chr4g0064781 31.949 313 197 7 39 346 50 351 4.20e-46 161
Msa0976400 MtrunA17_Chr8g0370721 31.111 315 198 8 27 329 40 347 4.65e-46 161
Msa0976400 MtrunA17_Chr8g0365241 31.595 326 199 10 14 326 32 346 4.84e-46 161
Msa0976400 MtrunA17_Chr3g0121141 33.550 307 185 8 39 336 7 303 5.59e-46 159
Msa0976400 MtrunA17_Chr4g0066991 35.692 325 166 10 18 327 45 341 5.97e-46 160
Msa0976400 MtrunA17_Chr5g0420941 33.121 314 199 6 14 321 20 328 2.06e-45 159
Msa0976400 MtrunA17_Chr5g0420981 32.000 300 182 8 39 326 53 342 2.06e-45 159
Msa0976400 MtrunA17_Chr5g0439011 32.903 310 187 7 39 336 8 308 2.13e-45 158
Msa0976400 MtrunA17_Chr8g0375681 33.103 290 177 7 68 351 15 293 2.55e-45 157
Msa0976400 MtrunA17_Chr4g0045451 32.335 334 185 12 16 319 4 326 2.67e-45 159
Msa0976400 MtrunA17_Chr1g0204181 32.934 334 186 9 16 324 38 358 3.10e-45 159
Msa0976400 MtrunA17_Chr6g0474391 34.132 334 182 10 16 324 43 363 4.45e-45 159
Msa0976400 MtrunA17_Chr1g0167911 33.435 329 189 10 14 326 29 343 5.99e-45 158
Msa0976400 MtrunA17_Chr5g0423201 31.683 303 196 6 31 326 38 336 6.57e-45 158
Msa0976400 MtrunA17_Chr1g0167951 34.951 309 175 8 33 327 47 343 1.00e-44 157
Msa0976400 MtrunA17_Chr4g0050031 33.784 296 174 8 39 321 62 348 1.97e-44 157
Msa0976400 MtrunA17_Chr5g0421101 30.792 341 217 10 14 346 22 351 4.11e-44 155
Msa0976400 MtrunA17_Chr5g0424211 30.164 305 202 6 13 309 15 316 4.34e-44 155
Msa0976400 MtrunA17_Chr7g0236011 36.482 307 173 8 35 327 63 361 5.04e-44 156
Msa0976400 MtrunA17_Chr1g0161081 35.235 298 172 10 39 326 73 359 9.22e-44 155
Msa0976400 MtrunA17_Chr5g0420951 30.625 320 202 9 35 345 49 357 1.50e-43 154
Msa0976400 MtrunA17_Chr1g0167961 34.824 313 169 11 28 319 54 352 1.66e-43 155
Msa0976400 MtrunA17_Chr5g0421091 30.294 340 221 8 14 346 20 350 3.73e-43 153
Msa0976400 MtrunA17_Chr3g0145181 31.321 265 177 4 53 314 69 331 5.73e-43 153
Msa0976400 MtrunA17_Chr4g0045471 30.357 336 190 13 16 319 4 327 6.16e-43 152
Msa0976400 MtrunA17_Chr2g0314401 31.677 322 205 7 14 326 26 341 7.85e-43 152
Msa0976400 MtrunA17_Chr5g0423221 30.530 321 209 7 14 326 46 360 1.39e-42 152
Msa0976400 MtrunA17_Chr1g0191201 31.515 330 198 8 8 319 25 344 2.09e-42 152
Msa0976400 MtrunA17_Chr2g0314391 33.333 273 171 6 59 326 94 360 2.18e-42 152
Msa0976400 MtrunA17_Chr7g0247991 34.012 344 181 12 14 331 42 365 3.20e-42 151
Msa0976400 MtrunA17_Chr8g0351101 33.232 328 196 10 14 324 31 352 9.25e-42 150
Msa0976400 MtrunA17_Chr5g0420901 30.178 338 221 7 14 345 21 349 1.09e-41 149
Msa0976400 MtrunA17_Chr5g0420721 31.321 265 167 6 94 354 8 261 1.23e-41 147
Msa0976400 MtrunA17_Chr1g0167931 31.498 327 160 9 14 326 29 305 1.39e-41 148
Msa0976400 MtrunA17_Chr1g0194321 30.816 331 201 8 39 351 20 340 2.13e-41 148
Msa0976400 MtrunA17_Chr1g0161111 33.663 303 170 9 39 326 132 418 2.34e-41 150
Msa0976400 MtrunA17_Chr3g0145201 31.321 265 177 4 53 314 704 966 4.25e-41 154
Msa0976400 MtrunA17_Chr4g0068891 32.997 297 178 9 39 324 20 306 7.77e-41 146
Msa0976400 MtrunA17_Chr7g0239091 29.073 313 202 8 15 321 135 433 8.52e-41 149
Msa0976400 MtrunA17_Chr1g0161041 35.690 297 172 9 39 326 96 382 1.28e-40 147
Msa0976400 MtrunA17_Chr7g0235981 34.944 269 153 7 70 327 58 315 2.70e-40 145
Msa0976400 MtrunA17_Chr1g0162191 32.278 316 198 8 14 319 21 330 3.69e-40 145
Msa0976400 MtrunA17_Chr2g0285931 31.438 299 186 8 39 325 28 319 7.51e-40 144
Msa0976400 MtrunA17_Chr4g0011311 34.426 244 141 7 33 266 61 295 1.25e-39 143
Msa0976400 MtrunA17_Chr8g0358941 32.573 307 177 9 36 324 24 318 6.35e-39 142
Msa0976400 MtrunA17_Chr2g0332191 28.618 304 199 8 35 327 48 344 8.54e-39 142
Msa0976400 MtrunA17_Chr7g0232161 33.333 240 149 7 39 272 60 294 1.14e-38 140
Msa0976400 MtrunA17_Chr3g0114871 32.955 264 168 6 3 260 5 265 1.98e-38 139
Msa0976400 MtrunA17_Chr8g0362741 37.313 201 112 5 64 260 83 273 5.73e-38 137
Msa0976400 MtrunA17_Chr5g0423211 30.892 314 200 10 16 319 24 330 1.45e-37 138
Msa0976400 MtrunA17_Chr3g0125421 29.674 337 200 10 12 324 12 335 1.45e-36 136
Msa0976400 MtrunA17_Chr2g0319491 31.169 308 172 11 31 322 25 308 2.84e-36 134
Msa0976400 MtrunA17_Chr1g0148771 30.282 284 185 6 39 319 63 336 4.09e-36 134
Msa0976400 MtrunA17_Chr2g0313111 29.874 318 198 9 18 324 7 310 6.36e-36 133
Msa0976400 MtrunA17_Chr5g0398291 28.863 343 217 11 3 321 6 345 1.11e-35 133
Msa0976400 MtrunA17_Chr3g0130391 29.703 303 191 9 40 324 67 365 1.25e-35 134
Msa0976400 MtrunA17_Chr3g0093751 28.834 326 208 9 15 327 28 342 1.67e-35 133
Msa0976400 MtrunA17_Chr3g0093761 28.528 326 208 8 15 327 28 341 1.67e-35 133
Msa0976400 MtrunA17_Chr3g0092531 31.293 294 181 9 39 321 6 289 3.26e-35 131
Msa0976400 MtrunA17_Chr3g0093741 29.193 322 212 8 15 327 28 342 4.20e-35 132
Msa0976400 MtrunA17_Chr4g0045461 30.462 325 202 9 16 319 4 325 5.45e-35 132
Msa0976400 MtrunA17_Chr8g0384461 28.289 304 195 9 32 319 40 336 1.83e-33 127
Msa0976400 MtrunA17_Chr8g0336801 40.972 144 81 2 187 327 2 144 3.00e-33 121
Msa0976400 MtrunA17_Chr7g0265351 30.303 297 197 7 35 327 35 325 3.16e-32 124
Msa0976400 MtrunA17_Chr5g0394071 37.640 178 103 3 154 330 4 174 1.70e-31 117
Msa0976400 MtrunA17_Chr2g0293931 37.500 192 107 6 155 334 10 200 2.47e-31 118
Msa0976400 MtrunA17_Chr5g0420881 39.865 148 85 1 198 345 3 146 3.49e-31 115
Msa0976400 MtrunA17_Chr8g0384481 30.031 323 190 13 39 341 59 365 9.66e-31 120
Msa0976400 MtrunA17_Chr4g0053251 29.572 257 170 4 52 298 34 289 2.55e-29 115
Msa0976400 MtrunA17_Chr8g0336871 38.323 167 90 5 165 326 3 161 2.77e-29 111
Msa0976400 MtrunA17_Chr1g0170631 35.088 171 106 3 152 319 3 171 4.42e-29 111
Msa0976400 MtrunA17_Chr7g0233661 41.290 155 83 3 177 330 1 148 2.27e-28 108
Msa0976400 MtrunA17_Chr4g0052251 27.419 310 204 10 26 324 19 318 2.92e-28 112
Msa0976400 MtrunA17_Chr6g0488511 27.010 311 196 9 38 333 2 296 5.98e-28 111
Msa0976400 MtrunA17_Chr4g0037611 41.791 134 70 3 198 330 38 164 8.03e-28 108
Msa0976400 MtrunA17_Chr3g0105281 26.689 296 186 7 36 322 31 304 4.15e-27 109
Msa0976400 MtrunA17_Chr2g0314371 29.642 307 175 11 14 289 27 323 1.06e-26 108
Msa0976400 MtrunA17_Chr3g0126761 33.333 192 119 4 152 336 44 233 1.38e-26 106
Msa0976400 MtrunA17_Chr8g0364171 43.590 117 63 3 152 266 18 133 2.05e-26 102
Msa0976400 MtrunA17_Chr1g0184131 42.361 144 40 2 224 325 1 143 2.11e-26 103
Msa0976400 MtrunA17_Chr6g0486831 30.519 308 180 11 31 311 12 312 6.97e-26 106
Msa0976400 MtrunA17_Chr4g0064771 35.912 181 113 2 150 327 24 204 8.59e-26 103
Msa0976400 MtrunA17_Chr4g0004061 28.767 292 189 8 55 338 32 312 6.91e-25 103
Msa0976400 MtrunA17_Chr1g0184141 34.921 126 81 1 78 203 4 128 1.22e-24 97.8
Msa0976400 MtrunA17_Chr7g0256741 29.861 288 183 9 36 312 7 286 1.76e-24 102
Msa0976400 MtrunA17_Chr4g0004071 28.832 274 187 6 55 326 32 299 4.42e-24 101
Msa0976400 MtrunA17_Chr4g0075471 38.760 129 75 2 198 323 31 158 7.85e-24 96.7
Msa0976400 MtrunA17_Chr8g0389941 27.812 320 199 13 29 323 24 336 1.12e-23 100
Msa0976400 MtrunA17_Chr7g0247741 27.740 292 188 8 33 312 5 285 3.07e-23 99.0
Msa0976400 MtrunA17_Chr4g0009561 30.000 290 186 9 55 335 33 314 1.05e-22 97.4
Msa0976400 MtrunA17_Chr4g0055911 28.197 305 197 10 31 319 1 299 3.50e-22 95.9
Msa0976400 MtrunA17_Chr1g0167921 45.794 107 56 2 154 259 51 156 3.69e-22 92.4
Msa0976400 MtrunA17_Chr5g0407731 24.841 314 215 7 16 320 5 306 1.37e-21 94.4
Msa0976400 MtrunA17_Chr8g0348951 26.935 323 189 11 39 347 10 299 4.41e-21 92.8
Msa0976400 MtrunA17_Chr4g0055871 26.421 299 189 8 31 311 1 286 2.52e-20 90.5
Msa0976400 MtrunA17_Chr5g0407781 25.260 289 200 6 37 321 3 279 8.48e-20 88.6
Msa0976400 MtrunA17_Chr8g0336831 30.244 205 124 7 24 216 43 240 8.51e-20 87.8
Msa0976400 MtrunA17_Chr3g0138351 27.306 271 185 6 55 319 33 297 1.73e-19 88.2
Msa0976400 MtrunA17_Chr1g0170641 32.394 142 91 2 14 152 22 161 1.54e-18 82.0
Msa0976400 MtrunA17_Chr3g0092581 29.878 164 108 4 162 321 1 161 5.79e-18 81.3
Msa0976400 MtrunA17_Chr8g0375581 48.387 62 32 0 194 255 23 84 2.73e-17 76.3
Msa0976400 MtrunA17_Chr2g0319521 34.821 112 71 2 150 260 14 124 9.47e-17 76.3
Msa0976400 MtrunA17_Chr1g0158011 31.034 174 114 4 153 321 71 243 9.81e-16 76.6
Msa0976400 MtrunA17_Chr4g0009541 30.601 183 119 5 143 319 115 295 2.42e-15 76.3
Msa0976400 MtrunA17_Chr1g0148781 30.769 182 120 5 143 319 121 301 4.83e-14 72.4
Msa0976400 MtrunA17_Chr7g0235991 31.783 129 81 4 52 179 39 161 1.03e-13 69.3
Msa0976400 MtrunA17_Chr1g0161101 41.000 100 48 3 193 291 403 492 1.17e-13 72.0
Msa0976400 MtrunA17_Chr2g0311611 45.070 71 31 3 197 260 2 71 3.14e-12 61.6
Msa0976400 MtrunA17_Chr2g0311641 29.545 132 90 3 16 145 33 163 3.30e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0976400 AT5G24530.1 39.091 330 194 4 1 326 1 327 1.03e-77 243
Msa0976400 AT4G10500.1 37.952 332 193 7 16 341 20 344 1.10e-71 228
Msa0976400 AT4G10490.1 35.465 344 208 7 5 341 7 343 6.37e-65 210
Msa0976400 AT5G05600.1 37.805 328 188 6 14 329 36 359 2.64e-64 209
Msa0976400 AT2G38240.1 38.182 330 192 7 15 335 22 348 6.08e-63 205
Msa0976400 AT3G55970.1 36.036 333 190 7 15 329 24 351 9.76e-59 195
Msa0976400 AT1G06620.1 36.556 331 180 10 14 327 36 353 4.20e-58 193
Msa0976400 AT5G08640.2 35.435 333 198 7 6 328 9 334 8.93e-57 189
Msa0976400 AT5G08640.1 35.435 333 198 7 6 328 9 334 8.93e-57 189
Msa0976400 AT3G11180.1 35.542 332 190 7 14 329 65 388 2.69e-56 189
Msa0976400 AT4G16330.2 38.000 300 171 7 36 329 64 354 3.41e-56 188
Msa0976400 AT3G11180.2 35.913 323 183 7 14 320 65 379 3.87e-55 186
Msa0976400 AT1G06640.1 36.928 306 168 9 37 327 62 357 6.60e-55 185
Msa0976400 AT5G59530.1 34.234 333 187 9 14 327 33 352 2.24e-54 183
Msa0976400 AT5G59540.1 36.364 308 163 9 39 327 61 354 2.76e-54 183
Msa0976400 AT2G36690.2 34.557 327 200 7 14 329 30 353 2.94e-54 183
Msa0976400 AT2G36690.1 34.557 327 200 7 14 329 30 353 2.94e-54 183
Msa0976400 AT1G03400.1 35.762 302 172 9 34 326 51 339 8.61e-54 181
Msa0976400 AT3G51240.1 33.962 318 196 7 14 322 13 325 1.34e-53 181
Msa0976400 AT3G19010.1 35.938 320 185 9 18 319 6 323 1.87e-53 181
Msa0976400 AT3G19010.4 35.938 320 185 9 18 319 6 323 1.87e-53 181
Msa0976400 AT1G06645.1 35.974 303 172 8 37 327 75 367 2.65e-53 181
Msa0976400 AT1G06650.2 35.644 303 176 8 37 327 62 357 2.44e-52 178
Msa0976400 AT2G44800.1 34.295 312 193 6 16 319 27 334 3.68e-52 177
Msa0976400 AT2G30830.1 36.991 319 164 11 31 327 43 346 4.33e-52 177
Msa0976400 AT1G03410.2 35.370 311 174 11 30 323 46 346 5.53e-52 177
Msa0976400 AT1G03410.1 34.839 310 177 10 30 323 83 383 1.52e-51 177
Msa0976400 AT5G43440.1 35.906 298 162 10 38 319 61 345 8.95e-51 174
Msa0976400 AT3G19000.1 36.585 328 175 11 19 319 7 328 1.08e-50 173
Msa0976400 AT5G43450.1 35.906 298 168 8 38 323 60 346 4.86e-50 172
Msa0976400 AT1G04380.1 35.168 327 185 11 14 327 21 333 7.07e-50 171
Msa0976400 AT3G60290.1 35.144 313 189 8 16 319 27 334 1.95e-49 170
Msa0976400 AT5G63600.1 32.268 313 197 6 11 319 8 309 5.83e-49 168
Msa0976400 AT5G07480.1 31.546 317 197 7 16 319 24 333 7.03e-49 169
Msa0976400 AT3G21420.1 34.421 337 189 13 3 319 18 342 1.07e-48 169
Msa0976400 AT1G04350.1 34.426 305 172 10 38 327 57 348 1.17e-48 168
Msa0976400 AT5G63600.2 32.166 314 197 7 11 319 8 310 6.25e-48 166
Msa0976400 AT1G78550.1 32.609 322 199 9 14 324 27 341 9.01e-48 166
Msa0976400 AT1G03400.2 33.333 330 170 11 34 326 51 367 1.15e-47 166
Msa0976400 AT4G16330.1 38.400 250 136 7 88 329 9 248 1.92e-47 162
Msa0976400 AT5G51810.1 32.571 350 213 12 11 347 37 376 2.20e-47 166
Msa0976400 AT2G30840.1 35.484 310 171 11 35 327 53 350 2.76e-47 165
Msa0976400 AT1G55290.1 32.298 322 199 7 16 327 37 349 3.20e-47 164
Msa0976400 AT5G63590.1 32.646 291 189 5 35 320 10 298 1.18e-46 162
Msa0976400 AT3G13610.1 31.677 322 202 7 15 327 37 349 1.47e-46 163
Msa0976400 AT2G25450.1 35.333 300 173 9 31 315 43 336 1.66e-46 162
Msa0976400 AT1G77330.1 31.646 316 187 7 38 335 2 306 2.91e-46 160
Msa0976400 AT3G61400.1 33.657 309 176 9 38 326 59 358 4.95e-46 162
Msa0976400 AT3G19010.3 33.542 319 164 9 18 319 6 293 1.46e-45 159
Msa0976400 AT5G05600.2 37.452 259 146 6 14 260 36 290 2.01e-45 158
Msa0976400 AT4G25420.1 33.233 331 198 9 11 324 35 359 2.94e-45 160
Msa0976400 AT1G17020.1 28.205 351 221 9 1 326 1 345 3.37e-45 159
Msa0976400 AT3G12900.1 33.648 318 201 6 14 326 31 343 1.26e-44 157
Msa0976400 AT4G25310.1 31.402 328 200 9 12 326 25 340 3.08e-44 156
Msa0976400 AT1G49390.1 31.000 300 195 6 39 329 45 341 3.08e-44 156
Msa0976400 AT5G07200.1 33.434 332 190 9 16 324 37 360 6.50e-44 156
Msa0976400 AT1G78440.1 31.333 300 184 9 39 325 18 308 1.99e-43 154
Msa0976400 AT1G06620.2 37.308 260 136 9 14 259 36 282 4.42e-43 151
Msa0976400 AT1G12010.1 32.154 311 186 9 39 336 7 305 5.24e-43 152
Msa0976400 AT5G20400.1 30.667 300 196 6 39 329 45 341 5.55e-43 153
Msa0976400 AT2G30840.3 34.839 310 167 12 35 327 53 344 8.64e-43 152
Msa0976400 AT4G25300.1 30.769 325 206 8 14 326 26 343 1.26e-42 152
Msa0976400 AT1G05010.1 34.815 270 162 6 39 303 7 267 1.92e-42 151
Msa0976400 AT1G78550.2 33.333 267 167 6 65 326 5 265 3.32e-42 149
Msa0976400 AT4G21200.1 33.677 291 160 8 41 322 50 316 5.80e-42 150
Msa0976400 AT3G55970.2 36.604 265 145 7 14 260 23 282 8.04e-42 149
Msa0976400 AT1G49390.2 31.321 265 175 5 69 329 1 262 1.11e-41 147
Msa0976400 AT1G60980.1 32.317 328 196 7 16 324 36 356 1.14e-41 150
Msa0976400 AT1G62380.1 31.290 310 190 7 39 336 7 305 1.60e-41 148
Msa0976400 AT1G06640.2 38.034 234 124 7 37 259 62 285 5.65e-41 147
Msa0976400 AT1G15550.1 31.081 296 186 7 35 321 53 339 1.38e-40 147
Msa0976400 AT5G20550.1 30.565 301 196 7 39 329 45 342 4.86e-40 145
Msa0976400 AT3G51240.2 34.016 244 152 6 83 322 3 241 7.27e-40 143
Msa0976400 AT1G06640.3 37.826 230 122 7 37 255 62 281 1.21e-39 142
Msa0976400 AT1G17010.1 28.221 326 214 8 14 326 27 345 4.11e-39 143
Msa0976400 AT5G63595.1 31.273 275 165 7 23 296 11 262 4.85e-39 140
Msa0976400 AT5G63580.1 38.723 235 134 6 27 255 5 235 5.65e-39 140
Msa0976400 AT5G63580.2 38.723 235 134 6 27 255 5 235 6.64e-39 139
Msa0976400 AT5G43440.2 36.325 234 125 8 38 259 61 282 1.56e-38 140
Msa0976400 AT1G80330.1 29.787 329 206 10 15 325 18 339 2.98e-38 140
Msa0976400 AT2G34555.1 32.602 319 191 11 17 324 7 312 5.17e-38 139
Msa0976400 AT1G47990.1 32.039 309 172 12 37 324 13 304 5.52e-38 139
Msa0976400 AT5G54000.2 30.303 297 190 6 39 325 46 335 1.23e-37 139
Msa0976400 AT1G80340.1 31.507 292 186 7 35 319 46 330 2.29e-37 138
Msa0976400 AT3G19000.2 34.545 275 147 11 19 266 7 275 2.45e-37 136
Msa0976400 AT1G06650.1 35.345 232 135 6 37 260 62 286 2.55e-37 137
Msa0976400 AT5G43450.2 35.537 242 135 8 27 259 50 279 5.22e-37 135
Msa0976400 AT5G51810.2 34.586 266 158 9 8 263 34 293 1.72e-36 134
Msa0976400 AT1G30040.1 29.530 298 195 8 35 324 27 317 1.05e-35 133
Msa0976400 AT3G19010.2 32.526 289 175 9 18 288 6 292 2.56e-35 131
Msa0976400 AT1G44090.1 28.659 328 214 10 39 351 63 385 2.81e-35 133
Msa0976400 AT5G54000.1 30.916 262 169 5 69 325 1 255 3.00e-35 130
Msa0976400 AT2G19590.1 30.492 305 188 9 39 333 11 301 7.14e-35 130
Msa0976400 AT5G59540.2 34.298 242 129 8 35 260 57 284 1.14e-34 129
Msa0976400 AT1G02400.1 29.299 314 203 9 23 324 8 314 1.21e-34 130
Msa0976400 AT2G30840.2 35.391 243 131 8 31 259 49 279 1.96e-34 129
Msa0976400 AT1G04380.2 35.409 257 142 10 14 260 21 263 2.25e-34 128
Msa0976400 AT4G22880.1 27.329 322 214 8 15 318 17 336 2.51e-34 130
Msa0976400 AT4G22880.2 27.329 322 214 8 15 318 17 336 2.51e-34 130
Msa0976400 AT4G22880.3 27.329 322 214 8 15 318 17 336 2.51e-34 130
Msa0976400 AT5G07480.2 31.944 216 137 3 112 319 11 224 7.28e-34 126
Msa0976400 AT5G43935.1 29.655 290 175 8 36 319 16 282 1.39e-33 127
Msa0976400 AT3G61400.2 33.891 239 133 7 38 260 59 288 6.27e-33 125
Msa0976400 AT4G25300.2 37.222 180 107 2 151 326 72 249 3.75e-32 122
Msa0976400 AT5G12270.1 28.086 324 214 7 14 326 31 346 1.13e-31 123
Msa0976400 AT4G25420.2 33.206 262 155 8 8 255 32 287 1.26e-31 121
Msa0976400 AT4G25310.2 28.395 324 187 9 12 326 25 312 1.16e-30 119
Msa0976400 AT2G19590.2 30.545 275 170 8 66 333 26 286 2.70e-30 118
Msa0976400 AT1G14130.1 29.560 318 188 8 39 339 9 307 1.03e-29 116
Msa0976400 AT3G50210.4 28.832 274 164 6 50 300 32 297 1.04e-29 117
Msa0976400 AT3G50210.1 28.832 274 164 6 50 300 32 297 1.04e-29 117
Msa0976400 AT3G50210.3 28.832 274 164 6 50 300 32 297 1.04e-29 117
Msa0976400 AT1G50960.1 28.477 302 174 10 39 322 40 317 1.79e-29 116
Msa0976400 AT4G21690.1 29.180 305 181 11 35 319 43 332 5.61e-29 115
Msa0976400 AT1G14120.2 28.814 295 182 5 38 321 7 284 8.05e-28 111
Msa0976400 AT1G14120.1 28.814 295 182 5 38 321 7 284 8.05e-28 111
Msa0976400 AT1G14120.3 28.814 295 182 5 38 321 7 284 8.05e-28 111
Msa0976400 AT3G49630.1 27.018 285 190 7 50 318 33 315 1.49e-27 111
Msa0976400 AT3G49630.3 27.018 285 190 7 50 318 29 311 1.90e-27 110
Msa0976400 AT3G49620.1 28.682 258 164 7 58 300 66 318 4.19e-27 110
Msa0976400 AT3G46500.5 27.215 316 207 10 38 338 16 323 3.00e-24 102
Msa0976400 AT1G52820.1 26.761 284 198 6 52 332 32 308 6.38e-23 98.2
Msa0976400 AT3G46490.1 27.362 307 201 8 38 324 16 320 6.41e-23 98.6
Msa0976400 AT4G23340.1 29.139 302 185 9 35 321 6 293 9.81e-23 97.8
Msa0976400 AT4G03070.1 28.481 316 194 9 36 332 11 313 1.51e-22 97.4
Msa0976400 AT1G30040.2 29.060 234 151 8 35 260 27 253 5.32e-22 94.7
Msa0976400 AT3G49630.2 30.220 182 119 4 144 318 62 242 7.16e-21 91.3
Msa0976400 AT3G50210.2 31.707 164 105 3 144 300 52 215 1.50e-20 90.1
Msa0976400 AT1G02400.2 27.170 265 175 8 23 276 8 265 1.61e-20 90.5
Msa0976400 AT1G35190.1 28.620 297 168 11 32 297 5 288 9.03e-20 89.7
Msa0976400 AT3G47190.1 25.797 345 183 14 13 322 4 310 1.55e-18 85.9
Msa0976400 AT1G35190.2 28.571 294 149 12 32 297 5 265 2.30e-18 85.1
Msa0976400 AT3G46500.7 27.612 268 175 9 38 290 16 279 3.14e-18 84.7
Msa0976400 AT1G28030.1 27.986 293 159 7 55 321 36 302 7.02e-18 84.0
Msa0976400 AT2G06960.1 37.226 137 71 4 193 329 27 148 1.30e-17 79.3
Msa0976400 AT5G58660.1 27.208 283 164 13 39 290 34 305 5.38e-17 81.6
Msa0976400 AT1G52800.1 26.437 261 174 7 58 312 37 285 1.66e-16 80.1
Msa0976400 AT1G80320.1 27.273 264 173 9 56 311 33 285 2.36e-16 79.7
Msa0976400 AT4G23340.2 33.140 172 108 4 156 321 5 175 1.07e-15 75.5
Msa0976400 AT4G03050.2 33.784 148 91 4 171 316 240 382 9.51e-13 69.7
Msa0976400 AT4G03050.1 33.784 148 91 4 171 316 240 382 9.51e-13 69.7
Msa0976400 AT4G16765.6 28.497 193 124 7 144 324 50 240 1.51e-12 67.4
Msa0976400 AT4G16765.1 28.497 193 124 7 144 324 50 240 1.51e-12 67.4
Msa0976400 AT4G16765.2 28.497 193 124 7 144 324 50 240 1.51e-12 67.4
Msa0976400 AT1G52790.1 26.667 285 188 11 56 331 29 301 1.87e-12 67.8
Msa0976400 AT4G16765.3 30.000 180 112 7 144 311 50 227 2.68e-12 66.2

Find 90 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTGGGACATGAAATTT+TGG 0.132305 6_4:-10472002 Msa0976400:CDS
TAATTAATTTACCGGTATTT+AGG 0.189458 6_4:+10473593 None:intergenic
CTGGAGAATTCATGGAGTTT+TGG 0.201882 6_4:-10473628 Msa0976400:CDS
TACACAAGAACTGAACAAAT+TGG 0.234028 6_4:-10472017 Msa0976400:CDS
AATGACATGGATTTATATAT+TGG 0.234856 6_4:+10471245 None:intergenic
AATATTGAACAGCATCTATT+TGG 0.241718 6_4:+10473684 None:intergenic
TGGAGTTTCCAAGGATTTAA+TGG 0.247095 6_4:-10473825 Msa0976400:CDS
TTGAAAGCTTCTGAAGAATA+TGG 0.255261 6_4:-10474749 Msa0976400:CDS
AGTTCCCCAATGAAATATTC+TGG 0.292700 6_4:+10471950 None:intergenic
AGCTTTCAAAATTTGCATTA+TGG 0.297714 6_4:+10474763 None:intergenic
TAACATTGGTTTAATCTTGC+AGG 0.303741 6_4:-10471735 Msa0976400:intron
GAGATGCTTTGTGAAGGGTT+AGG 0.321761 6_4:-10471980 Msa0976400:CDS
TGCAACACCTGTTCAATCTT+AGG 0.324493 6_4:+10471188 None:intergenic
CCCAAAGTTAAACTTGGTTC+AGG 0.330984 6_4:+10471884 None:intergenic
CCCTGAACCAAGTTTAACTT+TGG 0.331229 6_4:-10471885 Msa0976400:CDS
AAATAGATGCTGTTCAATAT+TGG 0.342734 6_4:-10473682 Msa0976400:CDS
CGCAAGAAGTTCTATGATAA+GGG 0.348966 6_4:-10471212 Msa0976400:CDS
ACAATACCCTTGATTGATCT+TGG 0.351764 6_4:-10474806 Msa0976400:CDS
AGCTTACAATTAATTCCATT+TGG 0.356869 6_4:+10473728 None:intergenic
ACAACAAAAGCATTGGGAAT+AGG 0.358351 6_4:+10471758 None:intergenic
CTTAAACCAGAATATTTCAT+TGG 0.358356 6_4:-10471956 Msa0976400:CDS
TCCTCCCTCTGGAGAATTCA+TGG 0.359193 6_4:-10473636 Msa0976400:CDS
AGATGCTTTGTGAAGGGTTA+GGG 0.374979 6_4:-10471979 Msa0976400:CDS
TCGCAAGAAGTTCTATGATA+AGG 0.375090 6_4:-10471213 Msa0976400:CDS
GATTGTAGGGTCTCTATGTT+TGG 0.376378 6_4:+10471856 None:intergenic
GGCTTCATCCATTAAATCCT+TGG 0.384348 6_4:+10473817 None:intergenic
ACATGGCCTTCAAGTTCTTA+AGG 0.384394 6_4:-10471804 Msa0976400:CDS
CCATCTACCAATTCTTCTGC+AGG 0.387277 6_4:+10471278 None:intergenic
GATAGAACCTGCAGAAGAAT+TGG 0.394684 6_4:-10471285 Msa0976400:CDS
ATATATAAATCCATGTCATT+TGG 0.395435 6_4:-10471242 Msa0976400:CDS
TTAAACCAGAATATTTCATT+GGG 0.396031 6_4:-10471955 Msa0976400:CDS
AAGGGTATTGTCTTACTTGA+AGG 0.401607 6_4:+10474818 None:intergenic
GAACTCTTTGAAAATATTGA+AGG 0.401853 6_4:+10473796 None:intergenic
TTCTTCTTCAGTGAGGTTGT+TGG 0.414722 6_4:-10472046 Msa0976400:intron
TCTATCATTCTTGAAAATGA+TGG 0.418610 6_4:+10471302 None:intergenic
GCATTGGGAATAGGTTCAAC+TGG 0.426795 6_4:+10471767 None:intergenic
AGTAGAATAGTGATGATTGT+AGG 0.427210 6_4:+10471842 None:intergenic
CCTGAACCAAGTTTAACTTT+GGG 0.435899 6_4:-10471884 Msa0976400:CDS
ATCACCAATGGAAGGCTTGT+TGG 0.436484 6_4:-10471389 Msa0976400:CDS
CATCATCCTTAAGAACTTGA+AGG 0.437394 6_4:+10471798 None:intergenic
CCTGCAGAAGAATTGGTAGA+TGG 0.439365 6_4:-10471278 Msa0976400:CDS
AAGTGATGAGCTAGTACTAC+TGG 0.454189 6_4:+10471917 None:intergenic
GAAGGGTTCGTGACCTTACC+AGG 0.468801 6_4:+10474836 None:intergenic
GACATGGATTTATATATTGG+AGG 0.474174 6_4:+10471248 None:intergenic
AAGTTCTTAAGGATGATGAA+TGG 0.475543 6_4:-10471793 Msa0976400:CDS
ACACAAGAACTGAACAAATT+GGG 0.478375 6_4:-10472016 Msa0976400:CDS
GCTAGACCCAAAGTTAAACT+TGG 0.481690 6_4:+10471878 None:intergenic
AATGTTAACAACAAAAGCAT+TGG 0.484105 6_4:+10471751 None:intergenic
GTTAAACTTGGTTCAGGGCA+AGG 0.489008 6_4:+10471890 None:intergenic
ATGTCCTCCAAGATCAATCA+AGG 0.496046 6_4:+10474799 None:intergenic
AGCACCAACAAGCCTTCCAT+TGG 0.501472 6_4:+10471385 None:intergenic
TAAGGGTCCTAAGATTGAAC+AGG 0.503912 6_4:-10471195 Msa0976400:intron
ATGTTAACAACAAAAGCATT+GGG 0.510320 6_4:+10471752 None:intergenic
CCAAAGTTAAACTTGGTTCA+GGG 0.516963 6_4:+10471885 None:intergenic
AGGGTATTGTCTTACTTGAA+GGG 0.520674 6_4:+10474819 None:intergenic
GTAGAATAGTGATGATTGTA+GGG 0.520687 6_4:+10471843 None:intergenic
ACACACCCTTGTCCTCCCTC+TGG 0.521134 6_4:-10473647 Msa0976400:CDS
TTTCCTTTGGAGGCATGGCA+TGG 0.523508 6_4:+10473774 None:intergenic
GAATGCTCTAAAGATCCAAA+TGG 0.524250 6_4:-10473743 Msa0976400:CDS
AACAAAGGCTTATCTCAAGT+TGG 0.528594 6_4:-10474913 Msa0976400:CDS
CGGTATTTAGGTGGTTTCTG+AGG 0.539734 6_4:+10473605 None:intergenic
GATCAACCATGGAGTTTCCA+AGG 0.539912 6_4:-10473834 Msa0976400:CDS
AATTCTCCAGAGGGAGGACA+AGG 0.540964 6_4:+10473641 None:intergenic
CTCAGAAACCACCTAAATAC+CGG 0.542839 6_4:-10473604 Msa0976400:intron
ACTTGAGTGTAGACCTGGTA+AGG 0.547756 6_4:-10474849 Msa0976400:CDS
CTTCAAGATCAAGAGGTACA+TGG 0.550565 6_4:-10471821 Msa0976400:CDS
TTAAATCCTTGGAAACTCCA+TGG 0.561347 6_4:+10473828 None:intergenic
ATACCCTTGATTGATCTTGG+AGG 0.563246 6_4:-10474803 Msa0976400:CDS
GCGAAATTCTCCAAATGACA+TGG 0.567195 6_4:+10471232 None:intergenic
TTCAGATAATCACCAATGGA+AGG 0.573552 6_4:-10471397 Msa0976400:intron
TTAATTTACCGGTATTTAGG+TGG 0.584318 6_4:+10473596 None:intergenic
TATTCTACTTCAAGATCAAG+AGG 0.586229 6_4:-10471828 Msa0976400:CDS
ATGAAATAGGTGATCAACCA+TGG 0.586511 6_4:-10473845 Msa0976400:intron
TCAAGTGGTTGCACAAAGGA+AGG 0.591490 6_4:+10474866 None:intergenic
GTTCCATGCCATGCCTCCAA+AGG 0.593751 6_4:-10473777 Msa0976400:CDS
AGATGCTGTTCAATATTGGA+AGG 0.600937 6_4:-10473678 Msa0976400:CDS
AACTCCATGAATTCTCCAGA+GGG 0.617098 6_4:+10473632 None:intergenic
CAACCACTTGAGTGTAGACC+TGG 0.618834 6_4:-10474854 Msa0976400:CDS
AGTGGTTGCACAAAGGAAGG+TGG 0.626242 6_4:+10474869 None:intergenic
TCATTTCAGATAATCACCAA+TGG 0.631009 6_4:-10471401 Msa0976400:intron
TAAACCAGAATATTTCATTG+GGG 0.634482 6_4:-10471954 Msa0976400:CDS
TTATGGAAACAATGGAACAA+AGG 0.638230 6_4:-10474928 None:intergenic
TTACCAGGTCTACACTCAAG+TGG 0.642924 6_4:+10474851 None:intergenic
CACAAAGGAAGGTGGAACTG+AGG 0.656514 6_4:+10474877 None:intergenic
TCCATGAATTCTCCAGAGGG+AGG 0.667889 6_4:+10473635 None:intergenic
TGTCCTCCAAGATCAATCAA+GGG 0.676722 6_4:+10474800 None:intergenic
AAACTCCATGAATTCTCCAG+AGG 0.678023 6_4:+10473631 None:intergenic
ACACTCAAGTGGTTGCACAA+AGG 0.680804 6_4:+10474862 None:intergenic
AAACTTGGTTCAGGGCAAGG+AGG 0.682307 6_4:+10471893 None:intergenic
ATTCTCCAGAGGGAGGACAA+GGG 0.726732 6_4:+10473642 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr6_4:10467605-10467624 None:intergenic 0.0%
!! TATAAATTTAAAAAAAAATA+TGG - chr6_4:10473763-10473782 Msa0976400:CDS 0.0%
!! TTCTTTATTAACTTAAAAAA+TGG - chr6_4:10466656-10466675 Msa0976400:intron 10.0%
!!! AACTTGAAAATTTTATATTA+TGG - chr6_4:10466700-10466719 Msa0976400:intron 10.0%
!! AGATTAAAAAAAAAAATTCT+AGG + chr6_4:10466963-10466982 None:intergenic 10.0%
!! AAAGTAAATAATTAATTTAC+CGG + chr6_4:10467574-10467593 None:intergenic 10.0%
!!! ATTACACTAATTTTTTTTTT+GGG + chr6_4:10468243-10468262 None:intergenic 10.0%
!!! TATTACACTAATTTTTTTTT+TGG + chr6_4:10468244-10468263 None:intergenic 10.0%
!!! CTTTTAATATGAAAAATATA+GGG + chr6_4:10468431-10468450 None:intergenic 10.0%
!!! TCTTTTAATATGAAAAATAT+AGG + chr6_4:10468432-10468451 None:intergenic 10.0%
!!! TTTTATAACGATAATATTAA+GGG + chr6_4:10468596-10468615 None:intergenic 10.0%
!!! ATACATAGTTTTAAATTATA+TGG + chr6_4:10470020-10470039 None:intergenic 10.0%
!!! ATATAATTTAAAACTATGTA+TGG - chr6_4:10470019-10470038 Msa0976400:intron 10.0%
!! AATAGGTAATAATTATAATT+TGG - chr6_4:10470643-10470662 Msa0976400:intron 10.0%
!!! AAAGAAATATGATTTAATTT+TGG - chr6_4:10470882-10470901 Msa0976400:intron 10.0%
!!! AAGAAATATGATTTAATTTT+GGG - chr6_4:10470883-10470902 Msa0976400:intron 10.0%
!! ATATATAAGTATTATATCAA+TGG + chr6_4:10470967-10470986 None:intergenic 10.0%
!! TATAATACTTATATATTAGA+TGG - chr6_4:10470971-10470990 Msa0976400:intron 10.0%
!! CATTAAATAATTTATGTATT+TGG + chr6_4:10471890-10471909 None:intergenic 10.0%
!!! AAAATTGATTCAAAAATATT+CGG - chr6_4:10471962-10471981 Msa0976400:CDS 10.0%
!!! ATTAAATCATTTTTTTTTGA+AGG - chr6_4:10472285-10472304 Msa0976400:intron 10.0%
!!! TTATATAATCTGAAATTTAT+AGG - chr6_4:10472608-10472627 Msa0976400:intron 10.0%
!!! TATATAATCTGAAATTTATA+GGG - chr6_4:10472609-10472628 Msa0976400:intron 10.0%
!!! AATAATCAAATTATAGTTTT+AGG - chr6_4:10473071-10473090 Msa0976400:intron 10.0%
!! AAATAATAAATAACATTGTT+TGG - chr6_4:10473376-10473395 Msa0976400:intron 10.0%
!! AGTTAAATATATATTATTAG+GGG + chr6_4:10474631-10474650 None:intergenic 10.0%
!! GTAGTTAAATATATATTATT+AGG + chr6_4:10474633-10474652 None:intergenic 10.0%
!! TCAATAGAAATATATTGAAA+AGG - chr6_4:10467009-10467028 Msa0976400:intron 15.0%
!! CAATAGAAATATATTGAAAA+GGG - chr6_4:10467010-10467029 Msa0976400:intron 15.0%
!! AATCTAAAAAACTATGAAAT+AGG - chr6_4:10467298-10467317 Msa0976400:intron 15.0%
!! AAAAAATGACTTCAAAATAT+AGG + chr6_4:10467644-10467663 None:intergenic 15.0%
!!! TTTTTAACTAATATACCATT+TGG - chr6_4:10467659-10467678 Msa0976400:intron 15.0%
!! ACGACTTAAATATAATATAT+TGG + chr6_4:10467693-10467712 None:intergenic 15.0%
!! TAAAAAAAACAATTCAACTA+TGG - chr6_4:10468192-10468211 Msa0976400:intron 15.0%
!! ACATTAGTATATTATATGTA+GGG + chr6_4:10468367-10468386 None:intergenic 15.0%
!!! GTTTTATAACGATAATATTA+AGG + chr6_4:10468597-10468616 None:intergenic 15.0%
!! TAATATTATCGTTATAAAAC+TGG - chr6_4:10468597-10468616 Msa0976400:intron 15.0%
!!! ATATTTGTTAATATGATGAA+AGG - chr6_4:10468709-10468728 Msa0976400:intron 15.0%
!!! TATTTGTTAATATGATGAAA+GGG - chr6_4:10468710-10468729 Msa0976400:intron 15.0%
!!! TTATATGGTGAAAATATTTT+TGG + chr6_4:10470005-10470024 None:intergenic 15.0%
!! AAATAAAAAATCAGAACAAA+GGG - chr6_4:10470059-10470078 Msa0976400:intron 15.0%
!!! TAAGAGAAATATCTTTTTTT+TGG + chr6_4:10470196-10470215 None:intergenic 15.0%
!! ATCCAAAATATTAAAAAATC+TGG - chr6_4:10471451-10471470 Msa0976400:intron 15.0%
!!! ATACATTAATTTTTAAGTCT+AGG + chr6_4:10471489-10471508 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + chr6_4:10471884-10471903 None:intergenic 15.0%
!! AATCCAAAAAAAAAAAAATG+AGG - chr6_4:10472552-10472571 Msa0976400:intron 15.0%
!! ATCCAAAAAAAAAAAAATGA+GGG - chr6_4:10472553-10472572 Msa0976400:intron 15.0%
!! AAAACCATCAAATAAAATTA+TGG - chr6_4:10472661-10472680 Msa0976400:intron 15.0%
!!! TTTTCCATAATTTTATTTGA+TGG + chr6_4:10472668-10472687 None:intergenic 15.0%
!! AAAAAGTTATATTCAAACTT+TGG - chr6_4:10472722-10472741 Msa0976400:intron 15.0%
!!! CAATAATAAGTTTTATTAGT+TGG - chr6_4:10472954-10472973 Msa0976400:intron 15.0%
!! CTTAATTTATTCATGTAATT+TGG + chr6_4:10473030-10473049 None:intergenic 15.0%
!! TGAAAAATAGGTATATATTA+GGG + chr6_4:10473854-10473873 None:intergenic 15.0%
!! TTGAAAAATAGGTATATATT+AGG + chr6_4:10473855-10473874 None:intergenic 15.0%
!! AAAATACTTCAAAAACATAT+TGG + chr6_4:10473938-10473957 None:intergenic 15.0%
!! TATATAATTCCTCTTGAATA+AGG - chr6_4:10466496-10466515 Msa0976400:intron 20.0%
!! TCAAATCAAAATTTGTATGA+TGG - chr6_4:10466587-10466606 Msa0976400:intron 20.0%
!! TTCATTATAAGTCTCTAATA+AGG + chr6_4:10466767-10466786 None:intergenic 20.0%
!! ATATTGGTGAATTGATAAAA+AGG + chr6_4:10466870-10466889 None:intergenic 20.0%
!! TAATTAATTTACCGGTATTT+AGG + chr6_4:10467566-10467585 None:intergenic 20.0%
!! ATATTGGAAAAATATCCAAA+TGG + chr6_4:10467677-10467696 None:intergenic 20.0%
!! ATATTATATTTAAGTCGTTG+AGG - chr6_4:10467695-10467714 Msa0976400:intron 20.0%
!! TATTATATTTAAGTCGTTGA+GGG - chr6_4:10467696-10467715 Msa0976400:intron 20.0%
!!! TCTTTTGATATATTTGACTT+TGG + chr6_4:10467945-10467964 None:intergenic 20.0%
!!! TCTTACAAAACATATTTTTG+AGG - chr6_4:10468129-10468148 Msa0976400:intron 20.0%
!!! AGTTGAATTGTTTTTTTTAG+AGG + chr6_4:10468191-10468210 None:intergenic 20.0%
!! CATTAGTATATTATATGTAG+GGG + chr6_4:10468366-10468385 None:intergenic 20.0%
!! GACATTAGTATATTATATGT+AGG + chr6_4:10468368-10468387 None:intergenic 20.0%
!!! TTTTTTTATTTTTCGACGAT+AGG + chr6_4:10468551-10468570 None:intergenic 20.0%
!! TATATTACTAAGAACTCATT+TGG + chr6_4:10468914-10468933 None:intergenic 20.0%
!! AAGAATTCTAATGCTTATAA+AGG - chr6_4:10468936-10468955 Msa0976400:intron 20.0%
!! TTAAACCAGAATATTTCATT+GGG - chr6_4:10469201-10469220 Msa0976400:intron 20.0%
!!! TATCTTCTCTCATTTTTATT+TGG - chr6_4:10469464-10469483 Msa0976400:intron 20.0%
!! AATGACATGGATTTATATAT+TGG + chr6_4:10469914-10469933 None:intergenic 20.0%
!! ATATATAAATCCATGTCATT+TGG - chr6_4:10469914-10469933 Msa0976400:intron 20.0%
!!! GAAAATATTTTTGGATGATT+AGG + chr6_4:10469996-10470015 None:intergenic 20.0%
!! GAAATAAAAAATCAGAACAA+AGG - chr6_4:10470058-10470077 Msa0976400:intron 20.0%
!!! TTTGAAAAAGCATTTAAATG+AGG - chr6_4:10470216-10470235 Msa0976400:intron 20.0%
!!! TTGAAAAAGCATTTAAATGA+GGG - chr6_4:10470217-10470236 Msa0976400:intron 20.0%
!! TAGATACAAAGAAAATTGTA+TGG + chr6_4:10470272-10470291 None:intergenic 20.0%
!! AAAAGGAAAGAAATAAAAGA+GGG + chr6_4:10470342-10470361 None:intergenic 20.0%
!! AAAAAGGAAAGAAATAAAAG+AGG + chr6_4:10470343-10470362 None:intergenic 20.0%
!! AATACTTCACTACATATTTA+TGG - chr6_4:10470599-10470618 Msa0976400:intron 20.0%
!! ATAAGTATTATATCAATGGT+GGG + chr6_4:10470963-10470982 None:intergenic 20.0%
!! TATAAGTATTATATCAATGG+TGG + chr6_4:10470964-10470983 None:intergenic 20.0%
!! TATTATGATTGAAATAGAAC+TGG - chr6_4:10471016-10471035 Msa0976400:intron 20.0%
!! ATATAAATGAATGTTGAAGT+TGG + chr6_4:10471085-10471104 None:intergenic 20.0%
!! AATAATAGATGTCAAACTTA+CGG + chr6_4:10471241-10471260 None:intergenic 20.0%
!! GTTCAATAAATAAATGTAGT+TGG + chr6_4:10471278-10471297 None:intergenic 20.0%
!! ACTACATTTATTTATTGAAC+TGG - chr6_4:10471278-10471297 Msa0976400:CDS 20.0%
!!! CACCAGATTTTTTAATATTT+TGG + chr6_4:10471456-10471475 None:intergenic 20.0%
!! AAAAGCAAATTCTTGTAAAT+AGG - chr6_4:10471916-10471935 Msa0976400:CDS 20.0%
!! AAATAAATGCAAATAGAACA+TGG - chr6_4:10472023-10472042 Msa0976400:CDS 20.0%
!!! TTTATTAATTTTCTCACCAT+GGG + chr6_4:10472155-10472174 None:intergenic 20.0%
!!! ATTTATTAATTTTCTCACCA+TGG + chr6_4:10472156-10472175 None:intergenic 20.0%
!! TCATATACAACTCAAAATTA+AGG + chr6_4:10472269-10472288 None:intergenic 20.0%
!!! TTTTGAGTTGTATATGAAAT+TGG + chr6_4:10472266-10472285 None:intergenic 20.0%
!! AATTATGGAAAAGAAAAAGA+AGG - chr6_4:10472676-10472695 Msa0976400:intron 20.0%
!! ATTATGGAAAAGAAAAAGAA+GGG - chr6_4:10472677-10472696 Msa0976400:intron 20.0%
!!! CTTTTTCTTTTAATAAGCAA+TGG + chr6_4:10472708-10472727 None:intergenic 20.0%
!! TTTGCTTACATAAACTTATA+AGG - chr6_4:10472839-10472858 Msa0976400:intron 20.0%
!! TTAAATATTGTGAAAACTAG+AGG + chr6_4:10472895-10472914 None:intergenic 20.0%
!! ATTGTTACACACTTAAATTT+AGG + chr6_4:10473110-10473129 None:intergenic 20.0%
!!! ATATATTAGGGTTTTGTTTT+GGG + chr6_4:10473842-10473861 None:intergenic 20.0%
!!! TATATATTAGGGTTTTGTTT+TGG + chr6_4:10473843-10473862 None:intergenic 20.0%
!!! TTCAAATTGATGTTGTTTAA+CGG + chr6_4:10474347-10474366 None:intergenic 20.0%
!!! TTCTATCCTTAATTAGTTTT+CGG - chr6_4:10474684-10474703 Msa0976400:intron 20.0%
! AGCTTTCAAAATTTGCATTA+TGG + chr6_4:10466396-10466415 None:intergenic 25.0%
!!! TGAAGAATATGGTTTTTTTC+AGG - chr6_4:10466418-10466437 Msa0976400:intron 25.0%
! AGAATATTCGTAGATATTCA+TGG - chr6_4:10466545-10466564 Msa0976400:intron 25.0%
! CATAATCTTGAATTCTTCTA+GGG + chr6_4:10466733-10466752 None:intergenic 25.0%
! TCATAATCTTGAATTCTTCT+AGG + chr6_4:10466734-10466753 None:intergenic 25.0%
! CCAAATGAGAAATTTCTTAA+GGG - chr6_4:10466801-10466820 Msa0976400:intron 25.0%
! TCAATTCACCAATATCAAAA+AGG - chr6_4:10466875-10466894 Msa0976400:intron 25.0%
! CAATTCACCAATATCAAAAA+GGG - chr6_4:10466876-10466895 Msa0976400:intron 25.0%
! AAAATTCTAGGTTTGAATTC+AGG + chr6_4:10466951-10466970 None:intergenic 25.0%
! TGACAAATGTTAGTAATTAG+TGG + chr6_4:10466988-10467007 None:intergenic 25.0%
! ATAAAAGATCAATATGCACT+TGG + chr6_4:10467049-10467068 None:intergenic 25.0%
!! CATATTGATCTTTTATGCTT+AGG - chr6_4:10467053-10467072 Msa0976400:intron 25.0%
!!! AAGAGATCATTTTTTTATCG+TGG - chr6_4:10467097-10467116 Msa0976400:intron 25.0%
!!! TCATTTTTTTATCGTGGTAT+AGG - chr6_4:10467103-10467122 Msa0976400:intron 25.0%
! GACAAGTAAACAAAACAAAA+TGG + chr6_4:10467237-10467256 None:intergenic 25.0%
!! GAACTCTTTGAAAATATTGA+AGG + chr6_4:10467363-10467382 None:intergenic 25.0%
! AGCTTACAATTAATTCCATT+TGG + chr6_4:10467431-10467450 None:intergenic 25.0%
! AATATTGAACAGCATCTATT+TGG + chr6_4:10467475-10467494 None:intergenic 25.0%
! AAATAGATGCTGTTCAATAT+TGG - chr6_4:10467474-10467493 Msa0976400:intron 25.0%
!!! ATATTTGACTTTGGTTTTCT+TGG + chr6_4:10467936-10467955 None:intergenic 25.0%
! TAATACTTTACTTAGCCTAA+GGG + chr6_4:10468293-10468312 None:intergenic 25.0%
! AAGAAAACAAAATATACCCA+CGG - chr6_4:10468448-10468467 Msa0976400:intron 25.0%
! TATAACGATAATATTAAGGG+CGG + chr6_4:10468593-10468612 None:intergenic 25.0%
!!! ATTTTTTCTCAACTTAAGCA+TGG - chr6_4:10468750-10468769 Msa0976400:intron 25.0%
!!! TTTTTTCTCAACTTAAGCAT+GGG - chr6_4:10468751-10468770 Msa0976400:intron 25.0%
!!! TTTGATCATTTGACTAGTTT+TGG - chr6_4:10468990-10469009 Msa0976400:intron 25.0%
!! TTGGACATAAATATTTTGCA+TGG - chr6_4:10469009-10469028 Msa0976400:intron 25.0%
!! TGGACATAAATATTTTGCAT+GGG - chr6_4:10469010-10469029 Msa0976400:intron 25.0%
!! GAGTTAAATTTGTTTACTTG+AGG + chr6_4:10469086-10469105 None:intergenic 25.0%
! CTTAAACCAGAATATTTCAT+TGG - chr6_4:10469200-10469219 Msa0976400:intron 25.0%
! TAAACCAGAATATTTCATTG+GGG - chr6_4:10469202-10469221 Msa0976400:intron 25.0%
!!! ATGTTAACAACAAAAGCATT+GGG + chr6_4:10469407-10469426 None:intergenic 25.0%
!! AATGTTAACAACAAAAGCAT+TGG + chr6_4:10469408-10469427 None:intergenic 25.0%
!!! AATGCTTTTGTTGTTAACAT+TGG - chr6_4:10469407-10469426 Msa0976400:intron 25.0%
!!! CAGATTTTAAAATCCGAATA+GGG + chr6_4:10469525-10469544 None:intergenic 25.0%
!!! TCAGATTTTAAAATCCGAAT+AGG + chr6_4:10469526-10469545 None:intergenic 25.0%
!!! AAATTTCAACGTGTTTTTGA+AGG - chr6_4:10469545-10469564 Msa0976400:intron 25.0%
! TCTATCATTCTTGAAAATGA+TGG + chr6_4:10469857-10469876 None:intergenic 25.0%
!!! AAATATCTTTTTTTTGGTGG+TGG + chr6_4:10470190-10470209 None:intergenic 25.0%
!!! GAGAAATATCTTTTTTTTGG+TGG + chr6_4:10470193-10470212 None:intergenic 25.0%
!!! TGAAAAAGCATTTAAATGAG+GGG - chr6_4:10470218-10470237 Msa0976400:intron 25.0%
! AAAGGAAAGAAATAAAAGAG+GGG + chr6_4:10470341-10470360 None:intergenic 25.0%
!! GTATGTAGGTTATTTCATTA+TGG + chr6_4:10470567-10470586 None:intergenic 25.0%
!! TTGACTTGAAAATAGTATGT+AGG + chr6_4:10470581-10470600 None:intergenic 25.0%
! TAATTATTACCTATTGCCAT+TGG + chr6_4:10470638-10470657 None:intergenic 25.0%
!!! CTAGCTTTTATTAATATGTG+TGG - chr6_4:10470713-10470732 Msa0976400:intron 25.0%
!! TCTAAAATTGTCTTTGTCTT+CGG + chr6_4:10470745-10470764 None:intergenic 25.0%
!!! AAATGAAGTACTAGTTCTTT+TGG - chr6_4:10470767-10470786 Msa0976400:intron 25.0%
! CAGAAAAGTGATAAAAGATT+TGG - chr6_4:10470843-10470862 Msa0976400:intron 25.0%
!! TCACTTAATTTTCCTATGAT+GGG - chr6_4:10470926-10470945 Msa0976400:intron 25.0%
! TTAGATGGTTTAGATTGAAA+AGG - chr6_4:10470986-10471005 Msa0976400:intron 25.0%
!! GTCAATTTTCTCTTGTAAAT+AGG + chr6_4:10471822-10471841 None:intergenic 25.0%
!!! TTTTAAAATAATACTCCCTC+CGG + chr6_4:10471943-10471962 None:intergenic 25.0%
!! AAAAGGTACAGTTCTTTAAT+TGG - chr6_4:10472056-10472075 Msa0976400:intron 25.0%
! GAAAATATTTCAACCCAAAT+TGG - chr6_4:10472216-10472235 Msa0976400:intron 25.0%
!!! ACTAGTTTGCAATTGTTTTT+TGG + chr6_4:10472409-10472428 None:intergenic 25.0%
!!! CACCCTCATTTTTTTTTTTT+TGG + chr6_4:10472558-10472577 None:intergenic 25.0%
!!! GTTTTTTCCTTTCACTTTAA+TGG + chr6_4:10472646-10472665 None:intergenic 25.0%
! CAATTCCAAAAAAGAGAAAT+TGG + chr6_4:10472748-10472767 None:intergenic 25.0%
! AAAGAAATACACCAAAACAT+GGG - chr6_4:10472862-10472881 Msa0976400:intron 25.0%
!!! AATGCTTAACTTTTTCTGAA+AGG - chr6_4:10472914-10472933 Msa0976400:intron 25.0%
!!! ATGCTTAACTTTTTCTGAAA+GGG - chr6_4:10472915-10472934 Msa0976400:intron 25.0%
! CACACTAATATTTGTTTATC+CGG - chr6_4:10473179-10473198 Msa0976400:intron 25.0%
! ATAAAATTAGTGTTACACAG+AGG - chr6_4:10473258-10473277 Msa0976400:intron 25.0%
!! CTCATTTTCATCAAATAGAT+AGG + chr6_4:10473430-10473449 None:intergenic 25.0%
!!! TATATTAGGGTTTTGTTTTG+GGG + chr6_4:10473841-10473860 None:intergenic 25.0%
!!! TTTTGAGTGACTTGAAAAAT+AGG + chr6_4:10473866-10473885 None:intergenic 25.0%
! AGTGAAATCTCATTAGAAAA+AGG + chr6_4:10473913-10473932 None:intergenic 25.0%
!!! TTCATTCATCATTTTTTAGG+AGG + chr6_4:10474055-10474074 None:intergenic 25.0%
!! TTGAAAATTGGCTCAAAATT+TGG + chr6_4:10474280-10474299 None:intergenic 25.0%
! ATTTGGAGATTGTTGAAAAT+TGG + chr6_4:10474292-10474311 None:intergenic 25.0%
! TTTGGGTATTCATCAAAATT+TGG + chr6_4:10474309-10474328 None:intergenic 25.0%
!! TCAAATTGATGTTGTTTAAC+GGG + chr6_4:10474346-10474365 None:intergenic 25.0%
!! ATTGTTCATATCTGAAGTAA+CGG + chr6_4:10474510-10474529 None:intergenic 25.0%
! CACTCCAAAAAAAAAAAATC+GGG + chr6_4:10474582-10474601 None:intergenic 25.0%
! CCACTCCAAAAAAAAAAAAT+CGG + chr6_4:10474583-10474602 None:intergenic 25.0%
!!! CGATTTTTTTTTTTTGGAGT+GGG - chr6_4:10474581-10474600 Msa0976400:intron 25.0%
!!! ACCTCAAGTTTTATTTTAAG+TGG - chr6_4:10474651-10474670 Msa0976400:intron 25.0%
! TCCACTTAAAATAAAACTTG+AGG + chr6_4:10474655-10474674 None:intergenic 25.0%
! ATTATTTGATCACGTTGTAT+AGG - chr6_4:10474718-10474737 Msa0976400:intron 25.0%
! TTGAAAGCTTCTGAAGAATA+TGG - chr6_4:10466407-10466426 Msa0976400:intron 30.0%
ACTTCATTTCCTTATTCAAG+AGG + chr6_4:10466508-10466527 None:intergenic 30.0%
TAAGAAATTTCTCATTTGGC+AGG + chr6_4:10466800-10466819 None:intergenic 30.0%
GCCAAATGAGAAATTTCTTA+AGG - chr6_4:10466800-10466819 Msa0976400:intron 30.0%
CCCTTAAGAAATTTCTCATT+TGG + chr6_4:10466804-10466823 None:intergenic 30.0%
CATTATCTCTTAACTCAGAT+GGG + chr6_4:10466918-10466937 None:intergenic 30.0%
TCATTATCTCTTAACTCAGA+TGG + chr6_4:10466919-10466938 None:intergenic 30.0%
! TTTGATATCTTTGACTTCTG+AGG + chr6_4:10467194-10467213 None:intergenic 30.0%
! CAAGCTCAAACAATGATTTT+AGG + chr6_4:10467267-10467286 None:intergenic 30.0%
! CATTCACTTATCTTTTCCTT+TGG + chr6_4:10467398-10467417 None:intergenic 30.0%
TTAATTTACCGGTATTTAGG+TGG + chr6_4:10467563-10467582 None:intergenic 30.0%
TGATGCAATAATTTCACGAT+TGG + chr6_4:10467857-10467876 None:intergenic 30.0%
ATCATCACATAACGTTATTG+AGG - chr6_4:10467876-10467895 Msa0976400:intron 30.0%
TCATCACATAACGTTATTGA+GGG - chr6_4:10467877-10467896 Msa0976400:intron 30.0%
!!! CCAATTCTTGGTTTTTTTAG+AGG + chr6_4:10468219-10468238 None:intergenic 30.0%
! CCTCTAAAAAAACCAAGAAT+TGG - chr6_4:10468216-10468235 Msa0976400:intron 30.0%
!!! TTTTTTTTGGGACCAATTCT+TGG + chr6_4:10468231-10468250 None:intergenic 30.0%
! TTCTAAAAGCTTTAACCCTT+AGG - chr6_4:10468275-10468294 Msa0976400:intron 30.0%
CTAATACTTTACTTAGCCTA+AGG + chr6_4:10468294-10468313 None:intergenic 30.0%
ATAAAACTGGAATGCACTAT+TGG - chr6_4:10468610-10468629 Msa0976400:intron 30.0%
TGTTTACTTGAGGTGAAATT+TGG + chr6_4:10469076-10469095 None:intergenic 30.0%
TACACAAGAACTGAACAAAT+TGG - chr6_4:10469139-10469158 Msa0976400:intron 30.0%
ACACAAGAACTGAACAAATT+GGG - chr6_4:10469140-10469159 Msa0976400:intron 30.0%
! CAAATTGGGACATGAAATTT+TGG - chr6_4:10469154-10469173 Msa0976400:intron 30.0%
GTAGAATAGTGATGATTGTA+GGG + chr6_4:10469316-10469335 None:intergenic 30.0%
AGTAGAATAGTGATGATTGT+AGG + chr6_4:10469317-10469336 None:intergenic 30.0%
TATTCTACTTCAAGATCAAG+AGG - chr6_4:10469328-10469347 Msa0976400:intron 30.0%
AAGTTCTTAAGGATGATGAA+TGG - chr6_4:10469363-10469382 Msa0976400:intron 30.0%
!! TAACATTGGTTTAATCTTGC+AGG - chr6_4:10469421-10469440 Msa0976400:intron 30.0%
!! GTGTTTTTGAAGGTTTTATG+AGG - chr6_4:10469555-10469574 Msa0976400:intron 30.0%
TCATTTCAGATAATCACCAA+TGG - chr6_4:10469755-10469774 Msa0976400:intron 30.0%
GACATGGATTTATATATTGG+AGG + chr6_4:10469911-10469930 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr6_4:10470145-10470164 Msa0976400:intron 30.0%
TGAAGTTCTTATGCTGAAAA+AGG + chr6_4:10470359-10470378 None:intergenic 30.0%
! ATTCTTTTGGCATGCATTTT+TGG + chr6_4:10470402-10470421 None:intergenic 30.0%
! TGTTAGCGACATTATTCTTT+TGG + chr6_4:10470415-10470434 None:intergenic 30.0%
TCGCTAACAAATACTTAAGT+CGG - chr6_4:10470426-10470445 Msa0976400:intron 30.0%
! TACTTAAGTCGGTTTAGAAT+CGG - chr6_4:10470437-10470456 Msa0976400:intron 30.0%
! GTCACTTAATTTTCCTATGA+TGG - chr6_4:10470925-10470944 Msa0976400:intron 30.0%
! ATTATATCAATGGTGGGATT+AGG + chr6_4:10470957-10470976 None:intergenic 30.0%
TATGATTGAAATAGAACTGG+AGG - chr6_4:10471019-10471038 Msa0976400:intron 30.0%
ATGATTGAAATAGAACTGGA+GGG - chr6_4:10471020-10471039 Msa0976400:intron 30.0%
AGTGTCTGAACAACATTTAT+AGG + chr6_4:10471357-10471376 None:intergenic 30.0%
TAAAAAATCTGGTGTGACTT+AGG - chr6_4:10471462-10471481 Msa0976400:intron 30.0%
ATACTTCAAAATACTCCATC+CGG - chr6_4:10471795-10471814 Msa0976400:CDS 30.0%
! TTTTCTCTTGTAAATAGGAC+CGG + chr6_4:10471817-10471836 None:intergenic 30.0%
CAAATTCTTGTAAATAGGAC+CGG - chr6_4:10471921-10471940 Msa0976400:CDS 30.0%
TGCAAATAGAACATGGAAAT+TGG - chr6_4:10472030-10472049 Msa0976400:CDS 30.0%
AACATGGAAATTGGTACAAA+AGG - chr6_4:10472039-10472058 Msa0976400:intron 30.0%
TTGATATACTAGCTCAATCT+TGG + chr6_4:10472114-10472133 None:intergenic 30.0%
AGATTGAGCTAGTATATCAA+TGG - chr6_4:10472114-10472133 Msa0976400:intron 30.0%
CAAAATTAAGGTGACGTTTA+TGG + chr6_4:10472186-10472205 None:intergenic 30.0%
TGGAAATTGTGCTAATTCTA+CGG + chr6_4:10472246-10472265 None:intergenic 30.0%
!!! GCAATTGTTTTTTGGTACTA+TGG + chr6_4:10472401-10472420 None:intergenic 30.0%
ATATCTAATAAAGAACCCGT+TGG + chr6_4:10472483-10472502 None:intergenic 30.0%
TTCATAATCCAAAGTAGGTT+TGG + chr6_4:10472533-10472552 None:intergenic 30.0%
TGGATTTCATAATCCAAAGT+AGG + chr6_4:10472538-10472557 None:intergenic 30.0%
TGAGAAACCATTAAAGTGAA+AGG - chr6_4:10472636-10472655 Msa0976400:intron 30.0%
!!! TTTGGCCAATTTCTCTTTTT+TGG - chr6_4:10472740-10472759 Msa0976400:intron 30.0%
AAAACTAGTACTTGCCAATT+GGG + chr6_4:10472787-10472806 None:intergenic 30.0%
GAAAGAAATACACCAAAACA+TGG - chr6_4:10472861-10472880 Msa0976400:intron 30.0%
ATTATTGTACCATGCATTAG+TGG + chr6_4:10472941-10472960 None:intergenic 30.0%
CGGATTTAGACATTTAGTAT+AGG - chr6_4:10473310-10473329 Msa0976400:intron 30.0%
TTAGACATTTAGTATAGGTG+TGG - chr6_4:10473315-10473334 Msa0976400:intron 30.0%
TGTTTATATGCTTTCGAAGT+TGG + chr6_4:10473672-10473691 None:intergenic 30.0%
AAAATATGGAAATCGAAGTG+TGG - chr6_4:10473777-10473796 Msa0976400:CDS 30.0%
! TCTCTAAAAGTTATCTCCTT+TGG - chr6_4:10474006-10474025 Msa0976400:intron 30.0%
AGAGAATATTGTCAAACCAA+AGG + chr6_4:10474025-10474044 None:intergenic 30.0%
!!! GGCTTCATTCATCATTTTTT+AGG + chr6_4:10474058-10474077 None:intergenic 30.0%
TGAAGATTCATCAAATGTTG+CGG + chr6_4:10474254-10474273 None:intergenic 30.0%
GGGATCTACAAAATAACTTT+GGG + chr6_4:10474326-10474345 None:intergenic 30.0%
TGCAACTCCTTAAAAACTTA+TGG - chr6_4:10474395-10474414 Msa0976400:intron 30.0%
! GTAGAGACCATAAGTTTTTA+AGG + chr6_4:10474405-10474424 None:intergenic 30.0%
ATATGAACAATGATGATACC+AGG - chr6_4:10474519-10474538 Msa0976400:intron 30.0%
TATGAACAATGATGATACCA+GGG - chr6_4:10474520-10474539 Msa0976400:intron 30.0%
!!! GCTACCCGATTTTTTTTTTT+TGG - chr6_4:10474575-10474594 Msa0976400:intron 30.0%
!!! CCGATTTTTTTTTTTTGGAG+TGG - chr6_4:10474580-10474599 Msa0976400:intron 30.0%
CTTCTACCGAAAACTAATTA+AGG + chr6_4:10474693-10474712 None:intergenic 30.0%
! GAGATTTTTCATTGATGAGA+AGG + chr6_4:10474891-10474910 None:intergenic 30.0%
AACAAAGGCTTATCTCAAGT+TGG - chr6_4:10466243-10466262 Msa0976400:CDS 35.0%
!! AGGGTATTGTCTTACTTGAA+GGG + chr6_4:10466340-10466359 None:intergenic 35.0%
!! AAGGGTATTGTCTTACTTGA+AGG + chr6_4:10466341-10466360 None:intergenic 35.0%
ACAATACCCTTGATTGATCT+TGG - chr6_4:10466350-10466369 Msa0976400:CDS 35.0%
TTCTCAAATTGAGCTTGGAA+AGG + chr6_4:10466843-10466862 None:intergenic 35.0%
!! GTTGTTTCTCAAATTGAGCT+TGG + chr6_4:10466848-10466867 None:intergenic 35.0%
! ACCAATATCAAAAAGGGTGT+GGG - chr6_4:10466882-10466901 Msa0976400:intron 35.0%
ATGAAATAGGTGATCAACCA+TGG - chr6_4:10467311-10467330 Msa0976400:intron 35.0%
TTAAATCCTTGGAAACTCCA+TGG + chr6_4:10467331-10467350 None:intergenic 35.0%
TGGAGTTTCCAAGGATTTAA+TGG - chr6_4:10467331-10467350 Msa0976400:intron 35.0%
! TCACTTATCTTTTCCTTTGG+AGG + chr6_4:10467395-10467414 None:intergenic 35.0%
!! GAATGCTCTAAAGATCCAAA+TGG - chr6_4:10467413-10467432 Msa0976400:intron 35.0%
AGATGCTGTTCAATATTGGA+AGG - chr6_4:10467478-10467497 Msa0976400:intron 35.0%
CATCACATAACGTTATTGAG+GGG - chr6_4:10467878-10467897 Msa0976400:intron 35.0%
GTCAAAACTGCAGAAATACA+AGG + chr6_4:10468017-10468036 None:intergenic 35.0%
! TTAGAGGTCTAGAGTTGAAT+TGG + chr6_4:10468175-10468194 None:intergenic 35.0%
TGAACCAAACTCAAATGTGT+GGG - chr6_4:10468397-10468416 Msa0976400:intron 35.0%
AAACAAAATATACCCACGGT+CGG - chr6_4:10468452-10468471 Msa0976400:intron 35.0%
ACTTGATGCAGACATTGAAT+TGG + chr6_4:10468487-10468506 None:intergenic 35.0%
CTCAACATAGAGAGAAAGTA+GGG - chr6_4:10468642-10468661 Msa0976400:intron 35.0%
TCAACATAGAGAGAAAGTAG+GGG - chr6_4:10468643-10468662 Msa0976400:intron 35.0%
!! ATTTTGGAGATGCTTTGTGA+AGG - chr6_4:10469170-10469189 Msa0976400:intron 35.0%
!! TTTTGGAGATGCTTTGTGAA+GGG - chr6_4:10469171-10469190 Msa0976400:intron 35.0%
AGTTCCCCAATGAAATATTC+TGG + chr6_4:10469209-10469228 None:intergenic 35.0%
CCAAAGTTAAACTTGGTTCA+GGG + chr6_4:10469274-10469293 None:intergenic 35.0%
! CCTGAACCAAGTTTAACTTT+GGG - chr6_4:10469272-10469291 Msa0976400:intron 35.0%
CATCATCCTTAAGAACTTGA+AGG + chr6_4:10469361-10469380 None:intergenic 35.0%
!! ACAACAAAAGCATTGGGAAT+AGG + chr6_4:10469401-10469420 None:intergenic 35.0%
!!! TTTTAAAACCCGAACTGCAA+AGG - chr6_4:10469595-10469614 Msa0976400:intron 35.0%
! TTTAAAACCCGAACTGCAAA+GGG - chr6_4:10469596-10469615 Msa0976400:intron 35.0%
TTCAGATAATCACCAATGGA+AGG - chr6_4:10469759-10469778 Msa0976400:intron 35.0%
TCGCAAGAAGTTCTATGATA+AGG - chr6_4:10469943-10469962 Msa0976400:intron 35.0%
CGCAAGAAGTTCTATGATAA+GGG - chr6_4:10469944-10469963 Msa0976400:intron 35.0%
CATAAAATATGCAAGGTACG+AGG - chr6_4:10470152-10470171 Msa0976400:intron 35.0%
! GGAGAAAGAATTTTGTGTGT+TGG - chr6_4:10470239-10470258 Msa0976400:intron 35.0%
! AGAATTTTGTGTGTTGGACT+TGG - chr6_4:10470245-10470264 Msa0976400:intron 35.0%
AGAATGCTAAACAATACTCC+AGG - chr6_4:10470666-10470685 Msa0976400:intron 35.0%
GAATGCTAAACAATACTCCA+GGG - chr6_4:10470667-10470686 Msa0976400:intron 35.0%
AATGCTAAACAATACTCCAG+GGG - chr6_4:10470668-10470687 Msa0976400:intron 35.0%
! GATTACTGAGCGATTGTTTT+TGG - chr6_4:10470789-10470808 Msa0976400:intron 35.0%
!!! AGCGATTGTTTTTGGTACTA+TGG - chr6_4:10470797-10470816 Msa0976400:intron 35.0%
!!! GATTGTTTTTGGTACTATGG+AGG - chr6_4:10470800-10470819 Msa0976400:intron 35.0%
! TTGGTACTATGGAGGTTTTA+TGG - chr6_4:10470808-10470827 Msa0976400:intron 35.0%
!! ATTTTGGGTGACGTTTATCA+TGG - chr6_4:10470898-10470917 Msa0976400:intron 35.0%
!! TTTTGGGTGACGTTTATCAT+GGG - chr6_4:10470899-10470918 Msa0976400:intron 35.0%
!! TGAATGTTGAAGTTGGTACT+TGG + chr6_4:10471078-10471097 None:intergenic 35.0%
TATACTAGCTCAATCTTGGA+TGG + chr6_4:10472110-10472129 None:intergenic 35.0%
ATTAAGGTGACGTTTATGGT+GGG + chr6_4:10472182-10472201 None:intergenic 35.0%
AATTAAGGTGACGTTTATGG+TGG + chr6_4:10472183-10472202 None:intergenic 35.0%
ATTCTACGGCAATCCAATTT+GGG + chr6_4:10472232-10472251 None:intergenic 35.0%
AATTCTACGGCAATCCAATT+TGG + chr6_4:10472233-10472252 None:intergenic 35.0%
!! GGTACTATGGAGATTTTAGT+TGG + chr6_4:10472388-10472407 None:intergenic 35.0%
TACAACTAGTTGATCCCAAT+TGG - chr6_4:10472770-10472789 Msa0976400:intron 35.0%
CAAAACTAGTACTTGCCAAT+TGG + chr6_4:10472788-10472807 None:intergenic 35.0%
CTCTCTTATCTTTGTTACTC+TGG + chr6_4:10473146-10473165 None:intergenic 35.0%
! TAGGATATATTGGTCTGAAC+CGG + chr6_4:10473201-10473220 None:intergenic 35.0%
TAGACGGATGTAGGATATAT+TGG + chr6_4:10473211-10473230 None:intergenic 35.0%
TCACTCAAAAACAAGAGAGA+AGG - chr6_4:10473876-10473895 Msa0976400:intron 35.0%
CAATGGTATTGTGTTCTAGT+TGG + chr6_4:10474143-10474162 None:intergenic 35.0%
AGAAATGTGTCGCAATTGAA+AGG + chr6_4:10474195-10474214 None:intergenic 35.0%
CGGGATCTACAAAATAACTT+TGG + chr6_4:10474327-10474346 None:intergenic 35.0%
ATGAACAATGATGATACCAG+GGG - chr6_4:10474521-10474540 Msa0976400:intron 35.0%
TGATCACGTTGTATAGGATT+CGG - chr6_4:10474724-10474743 Msa0976400:intron 35.0%
! TGTTGTTGTTGTTGTTGTTG+CGG + chr6_4:10474840-10474859 None:intergenic 35.0%
ATACCCTTGATTGATCTTGG+AGG - chr6_4:10466353-10466372 Msa0976400:CDS 40.0%
TGTCCTCCAAGATCAATCAA+GGG + chr6_4:10466359-10466378 None:intergenic 40.0%
ATGTCCTCCAAGATCAATCA+AGG + chr6_4:10466360-10466379 None:intergenic 40.0%
CACCAATATCAAAAAGGGTG+TGG - chr6_4:10466881-10466900 Msa0976400:intron 40.0%
! CCAATATCAAAAAGGGTGTG+GGG - chr6_4:10466883-10466902 Msa0976400:intron 40.0%
! CAATATCAAAAAGGGTGTGG+GGG - chr6_4:10466884-10466903 Msa0976400:intron 40.0%
TATAGGAATCAAGCTCTCGA+GGG - chr6_4:10467120-10467139 Msa0976400:intron 40.0%
GGCTTCATCCATTAAATCCT+TGG + chr6_4:10467342-10467361 None:intergenic 40.0%
!! TATCTTTTCCTTTGGAGGCA+TGG + chr6_4:10467390-10467409 None:intergenic 40.0%
AACTCCATGAATTCTCCAGA+GGG + chr6_4:10467527-10467546 None:intergenic 40.0%
AAACTCCATGAATTCTCCAG+AGG + chr6_4:10467528-10467547 None:intergenic 40.0%
! CTGGAGAATTCATGGAGTTT+TGG - chr6_4:10467528-10467547 Msa0976400:intron 40.0%
CTCAGAAACCACCTAAATAC+CGG - chr6_4:10467552-10467571 Msa0976400:intron 40.0%
CTGAACCAAACTCAAATGTG+TGG - chr6_4:10468396-10468415 Msa0976400:intron 40.0%
! AACTCCCACACATTTGAGTT+TGG + chr6_4:10468404-10468423 None:intergenic 40.0%
CCTACTTTCTCTCTATGTTG+AGG + chr6_4:10468644-10468663 None:intergenic 40.0%
CCTCAACATAGAGAGAAAGT+AGG - chr6_4:10468641-10468660 Msa0976400:intron 40.0%
TCTCAACTTAAGCATGGGTT+TGG - chr6_4:10468756-10468775 Msa0976400:intron 40.0%
GTGAAACACATCAAAAACCG+TGG + chr6_4:10468813-10468832 None:intergenic 40.0%
! CTCTCTTTTCTTCTTCAGTG+AGG - chr6_4:10469103-10469122 Msa0976400:intron 40.0%
TTCTTCTTCAGTGAGGTTGT+TGG - chr6_4:10469110-10469129 Msa0976400:intron 40.0%
AGATGCTTTGTGAAGGGTTA+GGG - chr6_4:10469177-10469196 Msa0976400:intron 40.0%
AAGTGATGAGCTAGTACTAC+TGG + chr6_4:10469242-10469261 None:intergenic 40.0%
! CCCTGAACCAAGTTTAACTT+TGG - chr6_4:10469271-10469290 Msa0976400:intron 40.0%
CCCAAAGTTAAACTTGGTTC+AGG + chr6_4:10469275-10469294 None:intergenic 40.0%
GCTAGACCCAAAGTTAAACT+TGG + chr6_4:10469281-10469300 None:intergenic 40.0%
GATTGTAGGGTCTCTATGTT+TGG + chr6_4:10469303-10469322 None:intergenic 40.0%
! CTTCAAGATCAAGAGGTACA+TGG - chr6_4:10469335-10469354 Msa0976400:intron 40.0%
! ACATGGCCTTCAAGTTCTTA+AGG - chr6_4:10469352-10469371 Msa0976400:intron 40.0%
GATAGAACCTGCAGAAGAAT+TGG - chr6_4:10469871-10469890 Msa0976400:intron 40.0%
GCGAAATTCTCCAAATGACA+TGG + chr6_4:10469927-10469946 None:intergenic 40.0%
TAAGGGTCCTAAGATTGAAC+AGG - chr6_4:10469961-10469980 Msa0976400:intron 40.0%
TGCAACACCTGTTCAATCTT+AGG + chr6_4:10469971-10469990 None:intergenic 40.0%
! TGAGTTTAGCTCAGTTGGTT+TGG - chr6_4:10470123-10470142 Msa0976400:intron 40.0%
!!! ATCTTTTTTTTGGTGGTGGC+CGG + chr6_4:10470186-10470205 None:intergenic 40.0%
! TAAGTCGGTTTAGAATCGGT+TGG - chr6_4:10470441-10470460 Msa0976400:intron 40.0%
! AAGTCGGTTTAGAATCGGTT+GGG - chr6_4:10470442-10470461 Msa0976400:intron 40.0%
ATTAAAGAATGTTGTGCCCC+TGG + chr6_4:10470687-10470706 None:intergenic 40.0%
GATTAGGCATTTCCCATCAT+AGG + chr6_4:10470941-10470960 None:intergenic 40.0%
!! TTGAAGTTGGTACTTGGTAG+TGG + chr6_4:10471072-10471091 None:intergenic 40.0%
ATTCTTGTAAATAGGACCGG+AGG - chr6_4:10471924-10471943 Msa0976400:CDS 40.0%
TTCTTGTAAATAGGACCGGA+GGG - chr6_4:10471925-10471944 Msa0976400:CDS 40.0%
GTAGAGATAGACATTTCCCA+TGG - chr6_4:10472136-10472155 Msa0976400:intron 40.0%
CTAATAAAGAACCCGTTGGT+CGG + chr6_4:10472479-10472498 None:intergenic 40.0%
TTCCATCTCCAAACCTACTT+TGG - chr6_4:10472522-10472541 Msa0976400:intron 40.0%
ATCCAAAGTAGGTTTGGAGA+TGG + chr6_4:10472527-10472546 None:intergenic 40.0%
ATCAAACCACACAGTTCTAC+TGG - chr6_4:10472809-10472828 Msa0976400:intron 40.0%
AATGATCCAGTAGAACTGTG+TGG + chr6_4:10472818-10472837 None:intergenic 40.0%
TATATCCTACATCCGTCTAG+AGG - chr6_4:10473212-10473231 Msa0976400:intron 40.0%
AATAAAATGTACCCCAAGCC+AGG - chr6_4:10473285-10473304 Msa0976400:intron 40.0%
ATAAAATGTACCCCAAGCCA+GGG - chr6_4:10473286-10473305 Msa0976400:intron 40.0%
TAAATGTCTAAATCCGTCCC+TGG + chr6_4:10473306-10473325 None:intergenic 40.0%
TGTCTTTGGGTGAGATTCTT+GGG + chr6_4:10473965-10473984 None:intergenic 40.0%
GCTAAGAGTTGAGTGTCTTT+GGG + chr6_4:10473978-10473997 None:intergenic 40.0%
TGCTAAGAGTTGAGTGTCTT+TGG + chr6_4:10473979-10473998 None:intergenic 40.0%
ATTGTAGATCAGGATGGCAA+TGG + chr6_4:10474160-10474179 None:intergenic 40.0%
CAAATGTTGCGGTGTGATTT+GGG + chr6_4:10474243-10474262 None:intergenic 40.0%
TCAAATGTTGCGGTGTGATT+TGG + chr6_4:10474244-10474263 None:intergenic 40.0%
TCAAGTGGTTGCACAAAGGA+AGG + chr6_4:10466293-10466312 None:intergenic 45.0%
ACACTCAAGTGGTTGCACAA+AGG + chr6_4:10466297-10466316 None:intergenic 45.0%
TTACCAGGTCTACACTCAAG+TGG + chr6_4:10466308-10466327 None:intergenic 45.0%
ACTTGAGTGTAGACCTGGTA+AGG - chr6_4:10466307-10466326 Msa0976400:CDS 45.0%
! CCCCACACCCTTTTTGATAT+TGG + chr6_4:10466886-10466905 None:intergenic 45.0%
GTATAGGAATCAAGCTCTCG+AGG - chr6_4:10467119-10467138 Msa0976400:intron 45.0%
GATCAACCATGGAGTTTCCA+AGG - chr6_4:10467322-10467341 Msa0976400:intron 45.0%
CGGTATTTAGGTGGTTTCTG+AGG + chr6_4:10467554-10467573 None:intergenic 45.0%
CCGTGGAAAACGTGAGTTTA+GGG + chr6_4:10468796-10468815 None:intergenic 45.0%
! CCCTAAACTCACGTTTTCCA+CGG - chr6_4:10468793-10468812 Msa0976400:intron 45.0%
ACCGTGGAAAACGTGAGTTT+AGG + chr6_4:10468797-10468816 None:intergenic 45.0%
GAGATGCTTTGTGAAGGGTT+AGG - chr6_4:10469176-10469195 Msa0976400:intron 45.0%
GTTAAACTTGGTTCAGGGCA+AGG + chr6_4:10469269-10469288 None:intergenic 45.0%
GCATTGGGAATAGGTTCAAC+TGG + chr6_4:10469392-10469411 None:intergenic 45.0%
CGTGTGAGAAACTCATAGGA+CGG - chr6_4:10469619-10469638 Msa0976400:intron 45.0%
GTGTGAGAAACTCATAGGAC+GGG - chr6_4:10469620-10469639 Msa0976400:intron 45.0%
ATCACCAATGGAAGGCTTGT+TGG - chr6_4:10469767-10469786 Msa0976400:intron 45.0%
CCATCTACCAATTCTTCTGC+AGG + chr6_4:10469881-10469900 None:intergenic 45.0%
CCTGCAGAAGAATTGGTAGA+TGG - chr6_4:10469878-10469897 Msa0976400:intron 45.0%
!!! TCTTTTTTTTGGTGGTGGCC+GGG + chr6_4:10470185-10470204 None:intergenic 45.0%
GCTATGCCCACACTAATCAA+TGG - chr6_4:10470513-10470532 Msa0976400:intron 45.0%
ATGCCCACACTAATCAATGG+TGG - chr6_4:10470516-10470535 Msa0976400:intron 45.0%
! CGTCCACCATTGATTAGTGT+GGG + chr6_4:10470522-10470541 None:intergenic 45.0%
TGGCAATTCCTCACAACCAA+TGG - chr6_4:10470619-10470638 Msa0976400:intron 45.0%
TCCTCACAACCAATGGCAAT+AGG - chr6_4:10470626-10470645 Msa0976400:intron 45.0%
! ACCTATTGCCATTGGTTGTG+AGG + chr6_4:10470630-10470649 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+TGG + chr6_4:10471813-10471832 None:intergenic 45.0%
TAGCTCAATCTTGGATGGCT+TGG + chr6_4:10472105-10472124 None:intergenic 45.0%
CATTTGAGAGTTCCGACCAA+CGG - chr6_4:10472464-10472483 Msa0976400:intron 45.0%
ATTTGAGAGTTCCGACCAAC+GGG - chr6_4:10472465-10472484 Msa0976400:intron 45.0%
AGCCACACATCTCCCATTAT+TGG - chr6_4:10473804-10473823 Msa0976400:CDS 45.0%
GCCACACATCTCCCATTATT+GGG - chr6_4:10473805-10473824 Msa0976400:CDS 45.0%
! ACCCAATAATGGGAGATGTG+TGG + chr6_4:10473809-10473828 None:intergenic 45.0%
GCAAGGACGAACCCAATAAT+GGG + chr6_4:10473819-10473838 None:intergenic 45.0%
!!! TAGGGTTTTGTTTTGGGGCA+AGG + chr6_4:10473836-10473855 None:intergenic 45.0%
TTTGGGTGAGATTCTTGGGT+TGG + chr6_4:10473961-10473980 None:intergenic 45.0%
GTGTCTTTGGGTGAGATTCT+TGG + chr6_4:10473966-10473985 None:intergenic 45.0%
! CCTTATAAAGTGCCCAGAGT+GGG - chr6_4:10474076-10474095 Msa0976400:intron 45.0%
! CTTATAAAGTGCCCAGAGTG+GGG - chr6_4:10474077-10474096 Msa0976400:intron 45.0%
GACGCAGTCTAGGAAAATCA+TGG + chr6_4:10474113-10474132 None:intergenic 45.0%
GGTGCAATTGTAGATCAGGA+TGG + chr6_4:10474166-10474185 None:intergenic 45.0%
CTGTGGTGCAATTGTAGATC+AGG + chr6_4:10474170-10474189 None:intergenic 45.0%
GTCGCAATTGAAAGGAACTG+TGG + chr6_4:10474187-10474206 None:intergenic 45.0%
!! TGATTTGGGTAATGGGTGAG+TGG + chr6_4:10474229-10474248 None:intergenic 45.0%
! TGCGGTGTGATTTGGGTAAT+GGG + chr6_4:10474236-10474255 None:intergenic 45.0%
! TTGCGGTGTGATTTGGGTAA+TGG + chr6_4:10474237-10474256 None:intergenic 45.0%
!! TATAAAATAATTTATATGAA+AGG + chr6_4:10471132-10471151 None:intergenic 5.0%
!! TTCATATATATATAAAAAAA+TGG - chr6_4:10471193-10471212 Msa0976400:intron 5.0%
!! GATAAATAAAATATAAATAA+AGG + chr6_4:10471410-10471429 None:intergenic 5.0%
!!! ATATTTTAAAAATTAATGTT+TGG + chr6_4:10471556-10471575 None:intergenic 5.0%
!! TAGTTAAATATATATTATTA+GGG + chr6_4:10474632-10474651 None:intergenic 5.0%
CACAAAGGAAGGTGGAACTG+AGG + chr6_4:10466282-10466301 None:intergenic 50.0%
AGTGGTTGCACAAAGGAAGG+TGG + chr6_4:10466290-10466309 None:intergenic 50.0%
CAACCACTTGAGTGTAGACC+TGG - chr6_4:10466302-10466321 Msa0976400:CDS 50.0%
! TCAAAAAGGGTGTGGGGGTT+AGG - chr6_4:10466889-10466908 Msa0976400:intron 50.0%
! TTTCCTTTGGAGGCATGGCA+TGG + chr6_4:10467385-10467404 None:intergenic 50.0%
ATTCTCCAGAGGGAGGACAA+GGG + chr6_4:10467517-10467536 None:intergenic 50.0%
AATTCTCCAGAGGGAGGACA+AGG + chr6_4:10467518-10467537 None:intergenic 50.0%
! TCCTCCCTCTGGAGAATTCA+TGG - chr6_4:10467520-10467539 Msa0976400:intron 50.0%
TCCATGAATTCTCCAGAGGG+AGG + chr6_4:10467524-10467543 None:intergenic 50.0%
TGGAAGTAAGAACCGACCGT+GGG + chr6_4:10468467-10468486 None:intergenic 50.0%
TTGGAAGTAAGAACCGACCG+TGG + chr6_4:10468468-10468487 None:intergenic 50.0%
AAACTTGGTTCAGGGCAAGG+AGG + chr6_4:10469266-10469285 None:intergenic 50.0%
AGTTTCTCGCACGCCCTATT+CGG - chr6_4:10469509-10469528 Msa0976400:intron 50.0%
AGGGCGTGTGAGAAACTCAT+AGG - chr6_4:10469615-10469634 Msa0976400:intron 50.0%
AGCACCAACAAGCCTTCCAT+TGG + chr6_4:10469774-10469793 None:intergenic 50.0%
CCAACTGAGCTAAACTCACG+AGG + chr6_4:10470121-10470140 None:intergenic 50.0%
! CCTCGTGAGTTTAGCTCAGT+TGG - chr6_4:10470118-10470137 Msa0976400:intron 50.0%
!!! CTTTTTTTTGGTGGTGGCCG+GGG + chr6_4:10470184-10470203 None:intergenic 50.0%
! GCGTCCACCATTGATTAGTG+TGG + chr6_4:10470523-10470542 None:intergenic 50.0%
! GAGGCAAGAGACCCATGTTT+TGG + chr6_4:10472876-10472895 None:intergenic 50.0%
CTGAAAGGGCCACTAATGCA+TGG - chr6_4:10472929-10472948 Msa0976400:intron 50.0%
TCTCTCCTCTAGACGGATGT+AGG + chr6_4:10473220-10473239 None:intergenic 50.0%
TCTAAATCCGTCCCTGGCTT+GGG + chr6_4:10473300-10473319 None:intergenic 50.0%
GGCAAGGACGAACCCAATAA+TGG + chr6_4:10473820-10473839 None:intergenic 50.0%
! GCCTTATAAAGTGCCCAGAG+TGG - chr6_4:10474075-10474094 Msa0976400:intron 50.0%
CCCACTCTGGGCACTTTATA+AGG + chr6_4:10474079-10474098 None:intergenic 50.0%
! GCGTGATTTTACCCCACTCT+GGG + chr6_4:10474091-10474110 None:intergenic 50.0%
TGGAGATCTTGACGCAGTCT+AGG + chr6_4:10474123-10474142 None:intergenic 50.0%
!! TGGGTAATGGGTGAGTGGTT+TGG + chr6_4:10474224-10474243 None:intergenic 50.0%
CAGGGGCGAATGCTTTCATA+GGG - chr6_4:10474538-10474557 Msa0976400:intron 50.0%
AGGGGCGAATGCTTTCATAG+GGG - chr6_4:10474539-10474558 Msa0976400:intron 50.0%
GCGAATGCTTTCATAGGGGA+GGG - chr6_4:10474543-10474562 Msa0976400:intron 50.0%
CGAATGCTTTCATAGGGGAG+GGG - chr6_4:10474544-10474563 Msa0976400:intron 50.0%
GAAGGGTTCGTGACCTTACC+AGG + chr6_4:10466323-10466342 None:intergenic 55.0%
GTTCCATGCCATGCCTCCAA+AGG - chr6_4:10467379-10467398 Msa0976400:intron 55.0%
GTGCGAGAAACTCACAGGGT+GGG + chr6_4:10469501-10469520 None:intergenic 55.0%
TCACACGCCCTTTGCAGTTC+GGG + chr6_4:10469606-10469625 None:intergenic 55.0%
CTCACACGCCCTTTGCAGTT+CGG + chr6_4:10469607-10469626 None:intergenic 55.0%
AAGGTACGAGGTTCGAACCC+CGG - chr6_4:10470164-10470183 Msa0976400:intron 55.0%
!! CTGGAGGGTATCTACCTGCT+AGG - chr6_4:10471035-10471054 Msa0976400:intron 55.0%
! AGGGTATCTACCTGCTAGGC+TGG - chr6_4:10471039-10471058 Msa0976400:intron 55.0%
GGGTATCTACCTGCTAGGCT+GGG - chr6_4:10471040-10471059 Msa0976400:intron 55.0%
GAGCTGCTCTCTCCTCTAGA+CGG + chr6_4:10473227-10473246 None:intergenic 55.0%
AATGTACCCCAAGCCAGGGA+CGG - chr6_4:10473290-10473309 Msa0976400:intron 55.0%
! CTAAATCCGTCCCTGGCTTG+GGG + chr6_4:10473299-10473318 None:intergenic 55.0%
GTCTAAATCCGTCCCTGGCT+TGG + chr6_4:10473301-10473320 None:intergenic 55.0%
! GGCGTGATTTTACCCCACTC+TGG + chr6_4:10474092-10474111 None:intergenic 55.0%
!! CCTATGAAAGCATTCGCCCC+TGG + chr6_4:10474540-10474559 None:intergenic 55.0%
CCAGGGGCGAATGCTTTCAT+AGG - chr6_4:10474537-10474556 Msa0976400:intron 55.0%
GGCGAATGCTTTCATAGGGG+AGG - chr6_4:10474542-10474561 Msa0976400:intron 55.0%
TCATAGGGGAGGGGTAGTCA+TGG - chr6_4:10474553-10474572 Msa0976400:intron 55.0%
ACACACCCTTGTCCTCCCTC+TGG - chr6_4:10467509-10467528 Msa0976400:intron 60.0%
CGTGCGAGAAACTCACAGGG+TGG + chr6_4:10469502-10469521 None:intergenic 60.0%
GGGCGTGCGAGAAACTCACA+GGG + chr6_4:10469505-10469524 None:intergenic 60.0%
AGGGCGTGCGAGAAACTCAC+AGG + chr6_4:10469506-10469525 None:intergenic 60.0%
TGGTAGCAGCCCAGCCTAGC+AGG + chr6_4:10471052-10471071 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 10466239 10474939 10466239 ID=Msa0976400;Name=Msa0976400
chr6_4 mRNA 10466239 10474939 10466239 ID=Msa0976400-mRNA-1;Parent=Msa0976400;Name=Msa0976400-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.8|1|1|5|0|376
chr6_4 exon 10474739 10474939 10474739 ID=Msa0976400-mRNA-1:exon:3815;Parent=Msa0976400-mRNA-1
chr6_4 exon 10473605 10473858 10473605 ID=Msa0976400-mRNA-1:exon:3814;Parent=Msa0976400-mRNA-1
chr6_4 exon 10471736 10472057 10471736 ID=Msa0976400-mRNA-1:exon:3813;Parent=Msa0976400-mRNA-1
chr6_4 exon 10471196 10471414 10471196 ID=Msa0976400-mRNA-1:exon:3812;Parent=Msa0976400-mRNA-1
chr6_4 exon 10466239 10466373 10466239 ID=Msa0976400-mRNA-1:exon:3811;Parent=Msa0976400-mRNA-1
chr6_4 CDS 10474739 10474939 10474739 ID=Msa0976400-mRNA-1:cds;Parent=Msa0976400-mRNA-1
chr6_4 CDS 10473605 10473858 10473605 ID=Msa0976400-mRNA-1:cds;Parent=Msa0976400-mRNA-1
chr6_4 CDS 10471736 10472057 10471736 ID=Msa0976400-mRNA-1:cds;Parent=Msa0976400-mRNA-1
chr6_4 CDS 10471196 10471414 10471196 ID=Msa0976400-mRNA-1:cds;Parent=Msa0976400-mRNA-1
chr6_4 CDS 10466239 10466373 10466239 ID=Msa0976400-mRNA-1:cds;Parent=Msa0976400-mRNA-1
Gene Sequence

>Msa0976400

ATGGAACAAAGGCTTATCTCAAGTTGGTCTAATGTTAATTCCTCAGTTCCACCTTCCTTTGTGCAACCACTTGAGTGTAGACCTGGTAAGGTCACGAACCCTTCAAGTAAGACAATACCCTTGATTGATCTTGGAGGACATGATCATGCTCATACCATAATGCAAATTTTGAAAGCTTCTGAAGAATATGGTTTTTTTCAGGTGATCAACCATGGAGTTTCCAAGGATTTAATGGATGAAGCCTTCAATATTTTCAAAGAGTTCCATGCCATGCCTCCAAAGGAAAAGATAAGTGAATGCTCTAAAGATCCAAATGGAATTAATTGTAAGCTCTATGCAAGTAGTGAGAATTACCAAATAGATGCTGTTCAATATTGGAAGGACACATTGACACACCCTTGTCCTCCCTCTGGAGAATTCATGGAGTTTTGGCCTCAGAAACCACCTAAATACCGTGAGGTTGTTGGTAAATATACACAAGAACTGAACAAATTGGGACATGAAATTTTGGAGATGCTTTGTGAAGGGTTAGGGCTTAAACCAGAATATTTCATTGGGGAACTTAGTGAAAATCCAGTAGTACTAGCTCATCACTTTCCTCCTTGCCCTGAACCAAGTTTAACTTTGGGTCTAGCCAAACATAGAGACCCTACAATCATCACTATTCTACTTCAAGATCAAGAGGTACATGGCCTTCAAGTTCTTAAGGATGATGAATGGATTCCAGTTGAACCTATTCCCAATGCTTTTGTTGTTAACATTGGTTTAATCTTGCAGATAATCACCAATGGAAGGCTTGTTGGTGCTGAACATAGAGTTGTGACAAATTCAAAAAGTGTACGTACATCTGTTGCATATTTCATCTATCCATCATTTTCAAGAATGATAGAACCTGCAGAAGAATTGGTAGATGGAAACAATCCTCCAATATATAAATCCATGTCATTTGGAGAATTTCGCAAGAAGTTCTATGATAAGGGTCCTAAGATTGAACAGATTGATTCGTCTTGTTTTGACACTCTCAGTCTCCGCAACAACAACAACAACAACAACAACAACAACAACAACAACAGAGAGAGCCTTCTCATCAATGAAAAATCTCAAGACAAAACAAAGAAACAAAATGAGTGA
Protein sequence

>Msa0976400

MEQRLISSWSNVNSSVPPSFVQPLECRPGKVTNPSSKTIPLIDLGGHDHAHTIMQILKASEEYGFFQVINHGVSKDLMDEAFNIFKEFHAMPPKEKISECSKDPNGINCKLYASSENYQIDAVQYWKDTLTHPCPPSGEFMEFWPQKPPKYREVVGKYTQELNKLGHEILEMLCEGLGLKPEYFIGELSENPVVLAHHFPPCPEPSLTLGLAKHRDPTIITILLQDQEVHGLQVLKDDEWIPVEPIPNAFVVNIGLILQIITNGRLVGAEHRVVTNSKSVRTSVAYFIYPSFSRMIEPAEELVDGNNPPIYKSMSFGEFRKKFYDKGPKIEQIDSSCFDTLSLRNNNNNNNNNNNNNRESLLINEKSQDKTKKQNE*