AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0310190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310190 MtrunA17_Chr2g0278931 94.234 659 15 2 1 637 1 658 0.0 1239
Msa0310190 MtrunA17_Chr5g0425251 67.945 652 179 6 6 633 5 650 0.0 916
Msa0310190 MtrunA17_Chr3g0115481 65.944 646 192 5 15 633 10 654 0.0 862
Msa0310190 MtrunA17_Chr2g0331951 52.760 616 269 2 35 628 22 637 0.0 664
Msa0310190 MtrunA17_Chr7g0260181 51.033 629 280 3 28 628 4 632 0.0 654
Msa0310190 MtrunA17_Chr4g0004261 51.608 622 278 3 30 628 23 644 0.0 649
Msa0310190 MtrunA17_Chr4g0043931 50.718 627 281 5 30 630 9 633 0.0 648
Msa0310190 MtrunA17_Chr1g0185231 52.520 615 270 2 35 627 20 634 0.0 644
Msa0310190 MtrunA17_Chr5g0425241 48.967 629 272 8 33 627 30 643 0.0 603
Msa0310190 MtrunA17_Chr3g0115461 48.815 633 285 6 26 627 25 649 0.0 599
Msa0310190 MtrunA17_Chr3g0124381 51.525 590 260 5 65 629 60 648 0.0 597
Msa0310190 MtrunA17_Chr4g0043951 53.019 530 221 3 35 539 21 547 0.0 570
Msa0310190 MtrunA17_Chr6g0485191 45.333 600 301 4 51 627 78 673 0.0 544
Msa0310190 MtrunA17_Chr3g0124371 39.720 642 339 11 24 627 18 649 1.36e-151 452
Msa0310190 MtrunA17_Chr7g0222631 38.014 584 334 7 66 627 56 633 3.82e-127 391
Msa0310190 MtrunA17_Chr1g0173031 50.000 364 138 5 30 391 23 344 1.55e-115 349
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310190 AT1G22150.1 68.132 637 180 2 20 633 15 651 0.0 860
Msa0310190 AT1G22150.3 68.132 637 180 2 20 633 15 651 0.0 860
Msa0310190 AT1G22150.4 68.132 637 180 2 20 633 15 651 0.0 860
Msa0310190 AT4G08620.1 66.772 635 183 5 20 628 6 638 0.0 842
Msa0310190 AT1G78000.2 66.615 647 181 3 22 633 2 648 0.0 838
Msa0310190 AT1G78000.1 66.615 647 181 3 22 633 2 648 0.0 838
Msa0310190 AT1G78000.3 66.615 647 181 3 22 633 2 648 0.0 838
Msa0310190 AT1G78000.5 67.162 606 164 3 22 592 2 607 0.0 786
Msa0310190 AT1G22150.2 67.838 569 160 2 20 565 15 583 0.0 762
Msa0310190 AT1G78000.4 66.667 579 158 3 22 565 2 580 0.0 741
Msa0310190 AT3G51895.2 52.025 642 276 4 18 627 38 679 0.0 686
Msa0310190 AT3G51895.1 52.640 625 273 3 26 627 10 634 0.0 683
Msa0310190 AT3G15990.1 51.948 616 274 2 35 628 26 641 0.0 662
Msa0310190 AT1G23090.1 49.681 626 292 3 35 637 3 628 0.0 631
Msa0310190 AT1G78000.6 66.329 493 143 2 11 480 3 495 0.0 614
Msa0310190 AT4G02700.1 50.243 617 282 5 36 628 10 625 0.0 613
Msa0310190 AT5G10180.1 48.018 656 311 8 6 633 23 676 0.0 585
Msa0310190 AT1G78000.7 68.539 445 117 2 144 565 1 445 0.0 573
Msa0310190 AT1G77990.1 49.654 578 264 4 80 630 89 666 0.0 568
Msa0310190 AT5G19600.1 43.118 603 307 4 50 627 29 620 2.88e-175 513
Msa0310190 AT1G23090.2 48.992 496 230 3 165 637 1 496 6.76e-167 486
Msa0310190 AT1G23090.3 48.992 496 230 3 165 637 1 496 6.76e-167 486
Msa0310190 AT1G23090.4 48.992 496 230 3 165 637 1 496 6.76e-167 486
Msa0310190 AT3G12520.1 38.007 592 333 9 61 627 44 626 8.07e-123 379
Msa0310190 AT3G12520.2 38.007 592 333 9 61 627 28 610 9.02e-123 379
Msa0310190 AT5G13550.1 38.047 594 330 10 61 627 57 639 9.39e-122 377
Msa0310190 AT3G12520.3 38.878 499 276 7 61 537 44 535 6.11e-105 328

Find 127 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGGATTGGTTTGATTTC+TGG 0.134086 2_4:+5053364 Msa0310190:CDS
TGTCACTTGTAAAAGAATTT+TGG 0.156060 2_4:-5054653 None:intergenic
ATATGCAAAGCTTGCAAATT+TGG 0.169620 2_4:+5052106 Msa0310190:CDS
CCTCTTCCCCATTCCAAAAT+AGG 0.182734 2_4:-5051853 None:intergenic
AAGAAAAGAAAGTTTGTTCT+TGG 0.220364 2_4:+5051814 Msa0310190:CDS
TGAAATTGTGTTTGAAATCT+TGG 0.241280 2_4:-5051741 None:intergenic
ATTAATTTATTAATAGATAA+TGG 0.248500 2_4:-5053313 None:intergenic
TCCTCTTGTGTATGCTTTCA+TGG 0.256797 2_4:+5052241 Msa0310190:CDS
CTATCTCATGCTGCCATTGT+TGG 0.257628 2_4:+5052532 Msa0310190:CDS
GCTTGCATGGGAGCCTTCTT+TGG 0.259292 2_4:+5054144 Msa0310190:CDS
TTCCCTAGTACTGCAGTCTT+TGG 0.269506 2_4:-5054679 None:intergenic
TGGAGCTTCTCGATTAAAAT+TGG 0.270789 2_4:-5055600 None:intergenic
GCCTGGAATCTGTGCTGCTT+TGG 0.281443 2_4:-5054743 None:intergenic
TTTACTTCCACTTTCTTTGC+AGG 0.292205 2_4:+5052377 Msa0310190:CDS
AAAGCAAGAGCAAGGTATTC+AGG 0.293778 2_4:-5052356 None:intergenic
TTCAAGGGTGATTTGATTGC+TGG 0.309276 2_4:+5051892 Msa0310190:CDS
CTTTATCTGTTTACATTACA+AGG 0.311893 2_4:+5053157 Msa0310190:CDS
AGAAGAATAAGAAACTCTTT+TGG 0.315159 2_4:+5053094 Msa0310190:CDS
CAACAGCTTAAAGGTCTTCT+TGG 0.315645 2_4:+5052589 Msa0310190:CDS
ATTGCACTCCAACAGCTTAA+AGG 0.316243 2_4:+5052580 Msa0310190:CDS
TGCTGCCATTGTTGGATTCA+TGG 0.321367 2_4:+5052540 Msa0310190:CDS
GGTGATGCTGTTGCAACTTT+TGG 0.324448 2_4:+5055675 Msa0310190:CDS
CTCTTCCCCATTCCAAAATA+GGG 0.337970 2_4:-5051852 None:intergenic
TTCCAGGGACAACTGTTTAT+AGG 0.340007 2_4:+5054704 Msa0310190:CDS
CCTGGAATCTGTGCTGCTTT+GGG 0.346194 2_4:-5054742 None:intergenic
CCCGATTAAGTCTGATAACT+TGG 0.348490 2_4:-5055628 None:intergenic
CTTTGTTTGGTCTTTAAACT+TGG 0.350630 2_4:-5051794 None:intergenic
GCAGTACTAGGGAAGCTTCC+AGG 0.366219 2_4:+5054688 Msa0310190:CDS
CTTCATAAATCTAACCCCTT+TGG 0.368134 2_4:-5055699 None:intergenic
ATTGAGGCAAGCACTGCATT+TGG 0.369886 2_4:-5054042 None:intergenic
TTCCAGGCATGTTGATCGTC+AGG 0.375770 2_4:+5054758 Msa0310190:CDS
GTGCTGCTTTGGGATATTGC+AGG 0.379647 2_4:-5054732 None:intergenic
TTATAGGAAGCTGTGGCTAT+TGG 0.387887 2_4:+5053486 Msa0310190:intron
CCCAAAGCAGCACAGATTCC+AGG 0.396337 2_4:+5054742 Msa0310190:CDS
TCCAAGTTATCAGACTTAAT+CGG 0.399320 2_4:+5055627 Msa0310190:CDS
TGGTCTTTAAACTTGGCAAA+AGG 0.400457 2_4:-5051787 None:intergenic
CCAAGTTATCAGACTTAATC+GGG 0.408453 2_4:+5055628 Msa0310190:CDS
CAACAATGGCAGCATGAGAT+AGG 0.409845 2_4:-5052531 None:intergenic
AGGCCAAAGACTGCAGTACT+AGG 0.416363 2_4:+5054676 Msa0310190:CDS
TGACTGATGAAGAGATTCTA+AGG 0.420497 2_4:+5054993 Msa0310190:CDS
TCGCTCAGCTGTGAACTATA+TGG 0.425561 2_4:+5053930 Msa0310190:CDS
ATGAAAGACTATTCACTAGA+TGG 0.435225 2_4:+5053525 Msa0310190:CDS
TTACAATCTTAAAAGTTTCA+AGG 0.444890 2_4:+5051876 Msa0310190:CDS
CCAAAATAGGGAAAACAGAT+TGG 0.445171 2_4:-5051840 None:intergenic
GATTGGTTTGATTTCTGGTA+TGG 0.445380 2_4:+5053369 Msa0310190:CDS
CTTTGCAGGAGTCGTTCAAA+TGG 0.446527 2_4:+5052391 Msa0310190:CDS
TGCAAGTCTTTGCATTCCTC+AGG 0.450670 2_4:+5051924 Msa0310190:CDS
GTCAATCTTCCACAGAAGAA+TGG 0.453847 2_4:-5054106 None:intergenic
TTCTCGATTAAAATTGGTCC+CGG 0.455223 2_4:-5055594 None:intergenic
ATACCTGTCCTTGATGTAGT+TGG 0.466743 2_4:-5054809 None:intergenic
CAAGAAGACCTTTAAGCTGT+TGG 0.469899 2_4:-5052588 None:intergenic
CACCACAGCTACTGGTCCTA+TGG 0.471439 2_4:-5052282 None:intergenic
TTCTAATTACCGCAATCATA+AGG 0.471536 2_4:-5054194 None:intergenic
TGGCTGCTTCATAGTCGATC+AGG 0.473139 2_4:-5054086 None:intergenic
GCTGCCATTGTTGGATTCAT+GGG 0.479140 2_4:+5052541 Msa0310190:CDS
GGTCTTTAAACTTGGCAAAA+GGG 0.479341 2_4:-5051786 None:intergenic
AAGAGAGACACCACAGCTAC+TGG 0.485168 2_4:-5052290 None:intergenic
TAAGTAAATCTTCAAAGGAA+TGG 0.486181 2_4:-5055182 None:intergenic
TCTTGGAAAAGTGTCTGCTT+AGG 0.491359 2_4:-5051724 None:intergenic
TACAATCTTAAAAGTTTCAA+GGG 0.492892 2_4:+5051877 Msa0310190:CDS
TGGAAAAGTGTCTGCTTAGG+AGG 0.498429 2_4:-5051721 None:intergenic
GCTGTGGTGTCTCTCTTGCT+TGG 0.500101 2_4:+5052296 Msa0310190:CDS
CCTCTTGTGTATGCTTTCAT+GGG 0.500665 2_4:+5052242 Msa0310190:CDS
ACTAGATGGTAACAGAGAAA+TGG 0.501787 2_4:+5053539 Msa0310190:CDS
TTTAGTGCTGCAATTCGGAT+TGG 0.504546 2_4:+5053352 Msa0310190:CDS
CCTCAAGAAAAGAAATATCC+AGG 0.505371 2_4:+5055209 Msa0310190:CDS
ACATCTTGCTATGTGGCTAC+AGG 0.505528 2_4:+5053597 Msa0310190:CDS
ACAGCTTCTCTTGGCAAACC+CGG 0.505593 2_4:+5055575 Msa0310190:intron
TTCTTTGACATCTTGCTATG+TGG 0.506110 2_4:+5053590 Msa0310190:CDS
AACGACTCCTGCAAAGAAAG+TGG 0.508239 2_4:-5052384 None:intergenic
TTTGAAGATGACACCAAAGA+AGG 0.514127 2_4:-5054157 None:intergenic
ATCTTCAAAAGTGTTGAAGT+TGG 0.514470 2_4:+5054171 Msa0310190:CDS
GACACTATAACACAAATCAT+AGG 0.515269 2_4:-5053132 None:intergenic
CTAGGAACAATGAACGTTGT+TGG 0.520186 2_4:+5053567 Msa0310190:CDS
CACAGCAGCTATAATAATTG+AGG 0.521029 2_4:-5054058 None:intergenic
ACCCTGACGATCAACATGCC+TGG 0.522361 2_4:-5054760 None:intergenic
CCACCATGTCTACGTGAAGA+AGG 0.527001 2_4:-5051661 None:intergenic
TTCTGGTATGGTAGCACTCA+CGG 0.530286 2_4:+5053381 Msa0310190:CDS
ACAATGAGATGCTGTATGCT+TGG 0.530319 2_4:-5055031 None:intergenic
TAGTGATGAGGCTGTGTCAA+GGG 0.531117 2_4:+5051615 Msa0310190:CDS
CAGTACTAGGGAAGCTTCCA+GGG 0.534123 2_4:+5054689 Msa0310190:CDS
TTCCTATAAACAGTTGTCCC+TGG 0.534409 2_4:-5054706 None:intergenic
TTTGGAGTGTACTTGAATAG+TGG 0.535429 2_4:-5054024 None:intergenic
TGAGGCTGTGTCAAGGGCCA+TGG 0.540864 2_4:+5051621 Msa0310190:CDS
GCTCTTAAGTAAATCTTCAA+AGG 0.545749 2_4:-5055187 None:intergenic
CTTGACACTTTGTGCATGAG+TGG 0.557130 2_4:-5051697 None:intergenic
CAGCTTCTCTTGGCAAACCC+GGG 0.557325 2_4:+5055576 Msa0310190:intron
GCTTGGAAGTCTGCTTTCAG+AGG 0.558212 2_4:+5052313 Msa0310190:CDS
CAGGTGAGACATATTGAGAA+GGG 0.565903 2_4:+5053283 Msa0310190:intron
CTGTTGGAGTGCAATAGTAA+TGG 0.567894 2_4:-5052572 None:intergenic
TTAGTGATGAGGCTGTGTCA+AGG 0.569946 2_4:+5051614 Msa0310190:CDS
TATTGTTTCTGTCATGACAT+CGG 0.579730 2_4:+5052639 Msa0310190:CDS
CTCGAACTCCAACTACATCA+AGG 0.579996 2_4:+5054801 Msa0310190:CDS
GGCCAAAGACTGCAGTACTA+GGG 0.584729 2_4:+5054677 Msa0310190:CDS
GCCATTGTTGGATTCATGGG+TGG 0.589161 2_4:+5052544 Msa0310190:CDS
TCAGCTGTGAACTATATGGC+TGG 0.589271 2_4:+5053934 Msa0310190:CDS
TGGAAGTAAAAGCAAGAGCA+AGG 0.591512 2_4:-5052364 None:intergenic
TCAGGTGAGACATATTGAGA+AGG 0.592196 2_4:+5053282 Msa0310190:intron
TTTAACCTTATAGGAAGCTG+TGG 0.593761 2_4:+5053479 Msa0310190:intron
GGAGTCGTTCAAATGGCACT+TGG 0.596225 2_4:+5052398 Msa0310190:CDS
TTACATTACAAGGGCAGACA+AGG 0.600103 2_4:+5053167 Msa0310190:CDS
TGAAGTTGGCCTTATGATTG+CGG 0.600606 2_4:+5054185 Msa0310190:CDS
AACAGAGAAATGGTGGCACT+AGG 0.601028 2_4:+5053549 Msa0310190:CDS
TAATTTACAGAATATTGAAG+TGG 0.603986 2_4:+5054969 Msa0310190:intron
AGTCTGATAACTTGGACGCA+TGG 0.604005 2_4:-5055620 None:intergenic
TCTCGATTAAAATTGGTCCC+GGG 0.605408 2_4:-5055593 None:intergenic
ATTACAAGGGCAGACAAGGA+TGG 0.605886 2_4:+5053171 Msa0310190:CDS
TCCAGGCATGTTGATCGTCA+GGG 0.609055 2_4:+5054759 Msa0310190:CDS
ATGAAGCAGCCATTCTTCTG+TGG 0.609299 2_4:+5054097 Msa0310190:CDS
ATGAAGGCTTACCCCATGGT+GGG 0.613391 2_4:-5052674 None:intergenic
ACTCCAACTACATCAAGGAC+AGG 0.616154 2_4:+5054806 Msa0310190:CDS
AGTTCAAGAGATATTGCCAT+AGG 0.618983 2_4:+5052266 Msa0310190:CDS
GATAAAATATTTCTAACCGT+AGG 0.621080 2_4:+5055654 Msa0310190:CDS
CCCATGAAAGCATACACAAG+AGG 0.621389 2_4:-5052242 None:intergenic
TTTATCTGTTTACATTACAA+GGG 0.625365 2_4:+5053158 Msa0310190:CDS
TGCCATAGGACCAGTAGCTG+TGG 0.628926 2_4:+5052280 Msa0310190:CDS
AATGAAGGCTTACCCCATGG+TGG 0.631307 2_4:-5052675 None:intergenic
AATCCTTCTTCACGTAGACA+TGG 0.636651 2_4:+5051658 Msa0310190:CDS
AGGAATGCAAAGACTTGCAA+TGG 0.639921 2_4:-5051920 None:intergenic
AGTTGCAACAGCATCACCTA+CGG 0.647275 2_4:-5055670 None:intergenic
AGATGGTAACAGAGAAATGG+TGG 0.649874 2_4:+5053542 Msa0310190:CDS
CAGAGTTAACAGCAAGACTG+TGG 0.657648 2_4:-5053989 None:intergenic
GTTACTGATATTGACACTAG+TGG 0.665183 2_4:+5055156 Msa0310190:CDS
CCTTCTTCACGTAGACATGG+TGG 0.680200 2_4:+5051661 Msa0310190:CDS
TCCACCCATGAATCCAACAA+TGG 0.683614 2_4:-5052545 None:intergenic
TGCTTACATAGTGCATACTG+AGG 0.684096 2_4:-5052131 None:intergenic
CAAGTTATCAGACTTAATCG+GGG 0.730026 2_4:+5055629 Msa0310190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATATATTTTGTTATAAAA+AGG - chr2_4:5052974-5052993 None:intergenic 10.0%
!!! ATTAATAAATTAATTTTCAG+TGG + chr2_4:5053322-5053341 Msa0310190:CDS 10.0%
!!! ATTAATCAACTTTTTTATTT+TGG + chr2_4:5053789-5053808 Msa0310190:intron 10.0%
!! TTTAATATCGTAAAATATTA+TGG - chr2_4:5054301-5054320 None:intergenic 10.0%
!! TAAATGTTTATGAAACAAAA+GGG - chr2_4:5053434-5053453 None:intergenic 15.0%
!! ATAAATGTTTATGAAACAAA+AGG - chr2_4:5053435-5053454 None:intergenic 15.0%
!!! TTTTGTTTCATAAACATTTA+TGG + chr2_4:5053434-5053453 Msa0310190:intron 15.0%
!!! ATATTGTTTTTTAACCTTAT+AGG + chr2_4:5053470-5053489 Msa0310190:intron 15.0%
!! ATCTAGTATAAAAACTTATA+TGG + chr2_4:5054433-5054452 Msa0310190:intron 15.0%
!!! TAATTGATGGATAAAATTAT+TGG - chr2_4:5055397-5055416 None:intergenic 15.0%
!! TATAATTATATCATCATAGA+TGG - chr2_4:5055498-5055517 None:intergenic 15.0%
!! TTACAATCTTAAAAGTTTCA+AGG + chr2_4:5051876-5051895 Msa0310190:CDS 20.0%
!! TACAATCTTAAAAGTTTCAA+GGG + chr2_4:5051877-5051896 Msa0310190:CDS 20.0%
!! AGATTTCAAAAGAAAAATGA+AGG - chr2_4:5052693-5052712 None:intergenic 20.0%
!! AATTTAAATAGATAACGTAG+TGG - chr2_4:5052720-5052739 None:intergenic 20.0%
!! AACATAAGAATAGTCATAAA+AGG - chr2_4:5053058-5053077 None:intergenic 20.0%
!! TTTATCTGTTTACATTACAA+GGG + chr2_4:5053158-5053177 Msa0310190:CDS 20.0%
!! AACTTGATTTAAAAGAGAAA+GGG - chr2_4:5054228-5054247 None:intergenic 20.0%
!! AAACTTGATTTAAAAGAGAA+AGG - chr2_4:5054229-5054248 None:intergenic 20.0%
!! ATATTAAATATCGTGATCAT+TGG + chr2_4:5054313-5054332 Msa0310190:intron 20.0%
!! ATAACTCATATTTACACAAT+CGG - chr2_4:5054413-5054432 None:intergenic 20.0%
!! TAATTTACAGAATATTGAAG+TGG + chr2_4:5054969-5054988 Msa0310190:intron 20.0%
!! CAAAATAAATCATGAAAGAT+TGG - chr2_4:5055095-5055114 None:intergenic 20.0%
!! AGTCATTTACTTCTTTAAAT+TGG + chr2_4:5055283-5055302 Msa0310190:intron 20.0%
!! TTCTTTAAATTGGAAACAAA+TGG + chr2_4:5055293-5055312 Msa0310190:intron 20.0%
!!! ATTGCTTTTTATTTCTTCCA+TGG - chr2_4:5051641-5051660 None:intergenic 25.0%
!! TGAAATTGTGTTTGAAATCT+TGG - chr2_4:5051744-5051763 None:intergenic 25.0%
!! CAAACTTTCTTTTCTTTGTT+TGG - chr2_4:5051810-5051829 None:intergenic 25.0%
!! AAGAAAAGAAAGTTTGTTCT+TGG + chr2_4:5051814-5051833 Msa0310190:CDS 25.0%
! GTAAATGTGAATGCATAAAT+AGG + chr2_4:5052076-5052095 Msa0310190:intron 25.0%
!! AGAAACAATATCAGTTTTCT+TGG - chr2_4:5052629-5052648 None:intergenic 25.0%
! AATTGGCAGACAATAATAAT+TGG + chr2_4:5052930-5052949 Msa0310190:intron 25.0%
! AATAATTGGACTATCATTCT+TGG + chr2_4:5052944-5052963 Msa0310190:intron 25.0%
! TAGTAAATGAAAATGAAGAG+AGG - chr2_4:5053020-5053039 None:intergenic 25.0%
! TTCTTATGTTGCAATAAAAC+AGG + chr2_4:5053068-5053087 Msa0310190:intron 25.0%
!! AGAAGAATAAGAAACTCTTT+TGG + chr2_4:5053094-5053113 Msa0310190:CDS 25.0%
!! GAAGAATAAGAAACTCTTTT+GGG + chr2_4:5053095-5053114 Msa0310190:CDS 25.0%
! CTTTATCTGTTTACATTACA+AGG + chr2_4:5053157-5053176 Msa0310190:CDS 25.0%
!!! AATATTTTAGTGCTGCAATT+CGG + chr2_4:5053347-5053366 Msa0310190:CDS 25.0%
! AATAAGCTAAAAACAGCTTA+TGG - chr2_4:5053681-5053700 None:intergenic 25.0%
!!! TGTTATTTTGATGAGTGTTT+CGG + chr2_4:5053883-5053902 Msa0310190:intron 25.0%
!!! TGTTTCGGATTATTTTTTTC+AGG + chr2_4:5053898-5053917 Msa0310190:intron 25.0%
! GGTTAAGTAAATGTTAAACA+AGG - chr2_4:5054601-5054620 None:intergenic 25.0%
!!! TGTCACTTGTAAAAGAATTT+TGG - chr2_4:5054656-5054675 None:intergenic 25.0%
!! AAATTCTTTTACAAGTGACA+AGG + chr2_4:5054656-5054675 Msa0310190:CDS 25.0%
! TAAGTAAATCTTCAAAGGAA+TGG - chr2_4:5055185-5055204 None:intergenic 25.0%
! ATTTGTAAATGTTAACTACC+TGG - chr2_4:5055230-5055249 None:intergenic 25.0%
! TAATTTCAGAGATCAAACTT+TGG - chr2_4:5055328-5055347 None:intergenic 25.0%
! GATAAAATTATTGGTGTGTA+AGG - chr2_4:5055388-5055407 None:intergenic 25.0%
!! GATAAAATATTTCTAACCGT+AGG + chr2_4:5055654-5055673 Msa0310190:CDS 25.0%
! CTTTGTTTGGTCTTTAAACT+TGG - chr2_4:5051797-5051816 None:intergenic 30.0%
!!! TGTTTTCCCTATTTTGGAAT+GGG + chr2_4:5051846-5051865 Msa0310190:CDS 30.0%
TGTACAAATAAATCTACCTG+AGG - chr2_4:5051943-5051962 None:intergenic 30.0%
AGTCGTCTGTGTAAATATTA+TGG + chr2_4:5052018-5052037 Msa0310190:intron 30.0%
ATATGCAAAGCTTGCAAATT+TGG + chr2_4:5052106-5052125 Msa0310190:CDS 30.0%
ACAGTACTACTATAAATGCA+TGG + chr2_4:5052437-5052456 Msa0310190:intron 30.0%
! TTCCTTTTTCTTCATTTTGC+AGG + chr2_4:5052488-5052507 Msa0310190:intron 30.0%
!! TATTGTTTCTGTCATGACAT+CGG + chr2_4:5052639-5052658 Msa0310190:CDS 30.0%
AATGAAAATGAAGAGAGGAA+GGG - chr2_4:5053015-5053034 None:intergenic 30.0%
AAATGAAAATGAAGAGAGGA+AGG - chr2_4:5053016-5053035 None:intergenic 30.0%
GACACTATAACACAAATCAT+AGG - chr2_4:5053135-5053154 None:intergenic 30.0%
!! CTCATAATGTATGCTATTTC+AGG + chr2_4:5053264-5053283 Msa0310190:intron 30.0%
TTTATGAAACAAAAGGGATG+AGG - chr2_4:5053428-5053447 None:intergenic 30.0%
ATGAAAGACTATTCACTAGA+TGG + chr2_4:5053525-5053544 Msa0310190:CDS 30.0%
AACAGTAAATAAACCCTCTT+TGG - chr2_4:5053625-5053644 None:intergenic 30.0%
!!! TTTTGGCTTGAATACTCTTT+TGG + chr2_4:5053806-5053825 Msa0310190:intron 30.0%
AGTAATAATCGTGAAACTAG+GGG - chr2_4:5053864-5053883 None:intergenic 30.0%
CAGTAATAATCGTGAAACTA+GGG - chr2_4:5053865-5053884 None:intergenic 30.0%
ACAGTAATAATCGTGAAACT+AGG - chr2_4:5053866-5053885 None:intergenic 30.0%
!!! ATTTGATTTTCTAGCTTGCA+TGG + chr2_4:5054131-5054150 Msa0310190:CDS 30.0%
!!! TTTGATTTTCTAGCTTGCAT+GGG + chr2_4:5054132-5054151 Msa0310190:CDS 30.0%
!! ATCTTCAAAAGTGTTGAAGT+TGG + chr2_4:5054171-5054190 Msa0310190:CDS 30.0%
TTCTAATTACCGCAATCATA+AGG - chr2_4:5054197-5054216 None:intergenic 30.0%
AGCTAGCTACATATTAGATT+TGG + chr2_4:5054275-5054294 Msa0310190:intron 30.0%
!! GATCAATTTTGATGGAATTG+AGG + chr2_4:5054927-5054946 Msa0310190:intron 30.0%
ATCATGAAAGATTGGATGAA+AGG - chr2_4:5055087-5055106 None:intergenic 30.0%
GCTCTTAAGTAAATCTTCAA+AGG - chr2_4:5055190-5055209 None:intergenic 30.0%
GTGGTTGTACATTTAATTGA+TGG - chr2_4:5055410-5055429 None:intergenic 30.0%
! ATCATCATAGATGGATTTCT+TGG - chr2_4:5055489-5055508 None:intergenic 30.0%
TCCAAGTTATCAGACTTAAT+CGG + chr2_4:5055627-5055646 Msa0310190:CDS 30.0%
!!! GAGTCAAGTTTTTAGTGATG+AGG + chr2_4:5051603-5051622 Msa0310190:CDS 35.0%
GGTCTTTAAACTTGGCAAAA+GGG - chr2_4:5051789-5051808 None:intergenic 35.0%
TGGTCTTTAAACTTGGCAAA+AGG - chr2_4:5051790-5051809 None:intergenic 35.0%
CCAAAATAGGGAAAACAGAT+TGG - chr2_4:5051843-5051862 None:intergenic 35.0%
! CCAATCTGTTTTCCCTATTT+TGG + chr2_4:5051840-5051859 Msa0310190:CDS 35.0%
!! CTGTTTTCCCTATTTTGGAA+TGG + chr2_4:5051845-5051864 Msa0310190:CDS 35.0%
!!! GTTTTCCCTATTTTGGAATG+GGG + chr2_4:5051847-5051866 Msa0310190:CDS 35.0%
TCGTCAATATTAACTGGAGA+AGG - chr2_4:5052189-5052208 None:intergenic 35.0%
AACTCGTCGTCAATATTAAC+TGG - chr2_4:5052195-5052214 None:intergenic 35.0%
AGTTAATATTGACGACGAGT+TGG + chr2_4:5052194-5052213 Msa0310190:intron 35.0%
AGTTCAAGAGATATTGCCAT+AGG + chr2_4:5052266-5052285 Msa0310190:CDS 35.0%
TTTACTTCCACTTTCTTTGC+AGG + chr2_4:5052377-5052396 Msa0310190:CDS 35.0%
! AAATGGCACTTGGAGTTTTA+AGG + chr2_4:5052408-5052427 Msa0310190:CDS 35.0%
AGCCTGCAAAATGAAGAAAA+AGG - chr2_4:5052493-5052512 None:intergenic 35.0%
! TTTTCTTCATTTTGCAGGCT+TGG + chr2_4:5052493-5052512 Msa0310190:intron 35.0%
!!! TGTCATGACATCGGTTTTTA+AGG + chr2_4:5052648-5052667 Msa0310190:CDS 35.0%
!! TAAGTTGTTTCTGCTTACAG+TGG + chr2_4:5052907-5052926 Msa0310190:intron 35.0%
!! ATTCGGATTGGTTTGATTTC+TGG + chr2_4:5053364-5053383 Msa0310190:CDS 35.0%
!! GATTGGTTTGATTTCTGGTA+TGG + chr2_4:5053369-5053388 Msa0310190:CDS 35.0%
TTTAACCTTATAGGAAGCTG+TGG + chr2_4:5053479-5053498 Msa0310190:intron 35.0%
ACTAGATGGTAACAGAGAAA+TGG + chr2_4:5053539-5053558 Msa0310190:CDS 35.0%
! TTCTTTGACATCTTGCTATG+TGG + chr2_4:5053590-5053609 Msa0310190:CDS 35.0%
TTACTGTTTGAGAGAGCTTA+TGG + chr2_4:5053637-5053656 Msa0310190:intron 35.0%
!! GTTGTTTTCATTAGCCATCA+TGG - chr2_4:5053716-5053735 None:intergenic 35.0%
! TTTGGAGTGTACTTGAATAG+TGG - chr2_4:5054027-5054046 None:intergenic 35.0%
CACAGCAGCTATAATAATTG+AGG - chr2_4:5054061-5054080 None:intergenic 35.0%
TTTGAAGATGACACCAAAGA+AGG - chr2_4:5054160-5054179 None:intergenic 35.0%
ACTCTATCTCTTATCAACGT+GGG - chr2_4:5054351-5054370 None:intergenic 35.0%
AACTCTATCTCTTATCAACG+TGG - chr2_4:5054352-5054371 None:intergenic 35.0%
TAAACTCTGACACCAAAAGT+AGG - chr2_4:5054503-5054522 None:intergenic 35.0%
AAATCGTAGATTCGTAGTTG+TGG - chr2_4:5054574-5054593 None:intergenic 35.0%
TTAACCCTATTTATGCATGC+AGG + chr2_4:5054615-5054634 Msa0310190:intron 35.0%
! CACTCTCTGATCAATTTTGA+TGG + chr2_4:5054919-5054938 Msa0310190:intron 35.0%
TGACTGATGAAGAGATTCTA+AGG + chr2_4:5054993-5055012 Msa0310190:CDS 35.0%
CAGTAACAGCTGCAATAATA+TGG - chr2_4:5055143-5055162 None:intergenic 35.0%
GTTACTGATATTGACACTAG+TGG + chr2_4:5055156-5055175 Msa0310190:CDS 35.0%
! CCTGGATATTTCTTTTCTTG+AGG - chr2_4:5055212-5055231 None:intergenic 35.0%
CCTCAAGAAAAGAAATATCC+AGG + chr2_4:5055209-5055228 Msa0310190:CDS 35.0%
TTCTCGATTAAAATTGGTCC+CGG - chr2_4:5055597-5055616 None:intergenic 35.0%
TGGAGCTTCTCGATTAAAAT+TGG - chr2_4:5055603-5055622 None:intergenic 35.0%
CCAAGTTATCAGACTTAATC+GGG + chr2_4:5055628-5055647 Msa0310190:CDS 35.0%
CAAGTTATCAGACTTAATCG+GGG + chr2_4:5055629-5055648 Msa0310190:CDS 35.0%
AATCCTTCTTCACGTAGACA+TGG + chr2_4:5051658-5051677 Msa0310190:CDS 40.0%
!! TCTTGGAAAAGTGTCTGCTT+AGG - chr2_4:5051727-5051746 None:intergenic 40.0%
CTCTTCCCCATTCCAAAATA+GGG - chr2_4:5051855-5051874 None:intergenic 40.0%
TTCAAGGGTGATTTGATTGC+TGG + chr2_4:5051892-5051911 Msa0310190:CDS 40.0%
AGGAATGCAAAGACTTGCAA+TGG - chr2_4:5051923-5051942 None:intergenic 40.0%
TGCTTACATAGTGCATACTG+AGG - chr2_4:5052134-5052153 None:intergenic 40.0%
TCCTCTTGTGTATGCTTTCA+TGG + chr2_4:5052241-5052260 Msa0310190:CDS 40.0%
CCTCTTGTGTATGCTTTCAT+GGG + chr2_4:5052242-5052261 Msa0310190:CDS 40.0%
! AAAGCAAGAGCAAGGTATTC+AGG - chr2_4:5052359-5052378 None:intergenic 40.0%
TGGAAGTAAAAGCAAGAGCA+AGG - chr2_4:5052367-5052386 None:intergenic 40.0%
CTGTTGGAGTGCAATAGTAA+TGG - chr2_4:5052575-5052594 None:intergenic 40.0%
ATTGCACTCCAACAGCTTAA+AGG + chr2_4:5052580-5052599 Msa0310190:CDS 40.0%
CAAGAAGACCTTTAAGCTGT+TGG - chr2_4:5052591-5052610 None:intergenic 40.0%
CAACAGCTTAAAGGTCTTCT+TGG + chr2_4:5052589-5052608 Msa0310190:CDS 40.0%
AAAAATGAAGGCTTACCCCA+TGG - chr2_4:5052681-5052700 None:intergenic 40.0%
GTTTCTGCTTACAGTGGAAT+TGG + chr2_4:5052913-5052932 Msa0310190:intron 40.0%
! AAGAGAGGAAGGGTAGTTTT+TGG - chr2_4:5053005-5053024 None:intergenic 40.0%
TTACATTACAAGGGCAGACA+AGG + chr2_4:5053167-5053186 Msa0310190:CDS 40.0%
TCAGGTGAGACATATTGAGA+AGG + chr2_4:5053282-5053301 Msa0310190:intron 40.0%
CAGGTGAGACATATTGAGAA+GGG + chr2_4:5053283-5053302 Msa0310190:intron 40.0%
TTTAGTGCTGCAATTCGGAT+TGG + chr2_4:5053352-5053371 Msa0310190:CDS 40.0%
AATAGCCACAGCTTCCTATA+AGG - chr2_4:5053487-5053506 None:intergenic 40.0%
TTATAGGAAGCTGTGGCTAT+TGG + chr2_4:5053486-5053505 Msa0310190:intron 40.0%
AGATGGTAACAGAGAAATGG+TGG + chr2_4:5053542-5053561 Msa0310190:CDS 40.0%
CTAGGAACAATGAACGTTGT+TGG + chr2_4:5053567-5053586 Msa0310190:CDS 40.0%
! TTTTCAAAACCTCGCCATGA+TGG + chr2_4:5053699-5053718 Msa0310190:intron 40.0%
! TCGCGAATCAGCAAAAGTAT+AGG - chr2_4:5053833-5053852 None:intergenic 40.0%
GTCAATCTTCCACAGAAGAA+TGG - chr2_4:5054109-5054128 None:intergenic 40.0%
!! TGAAGTTGGCCTTATGATTG+CGG + chr2_4:5054185-5054204 Msa0310190:CDS 40.0%
TGACACCAAAAGTAGGTCAA+GGG - chr2_4:5054496-5054515 None:intergenic 40.0%
TTCCAGGGACAACTGTTTAT+AGG + chr2_4:5054704-5054723 Msa0310190:CDS 40.0%
TTCCTATAAACAGTTGTCCC+TGG - chr2_4:5054709-5054728 None:intergenic 40.0%
ATACCTGTCCTTGATGTAGT+TGG - chr2_4:5054812-5054831 None:intergenic 40.0%
ACAATGAGATGCTGTATGCT+TGG - chr2_4:5055034-5055053 None:intergenic 40.0%
! GTACAACCACATGCTTGTTA+TGG + chr2_4:5055420-5055439 Msa0310190:intron 40.0%
!!! GATGTTTTGACAGCTTCTCT+TGG + chr2_4:5055566-5055585 Msa0310190:intron 40.0%
TCTCGATTAAAATTGGTCCC+GGG - chr2_4:5055596-5055615 None:intergenic 40.0%
CCCGATTAAGTCTGATAACT+TGG - chr2_4:5055631-5055650 None:intergenic 40.0%
! TGTTGCAACTTTTGGTCCAA+AGG + chr2_4:5055683-5055702 Msa0310190:CDS 40.0%
! GTTGCAACTTTTGGTCCAAA+GGG + chr2_4:5055684-5055703 Msa0310190:CDS 40.0%
! TTGCAACTTTTGGTCCAAAG+GGG + chr2_4:5055685-5055704 Msa0310190:CDS 40.0%
TTAGTGATGAGGCTGTGTCA+AGG + chr2_4:5051614-5051633 Msa0310190:CDS 45.0%
TAGTGATGAGGCTGTGTCAA+GGG + chr2_4:5051615-5051634 Msa0310190:CDS 45.0%
CTTGACACTTTGTGCATGAG+TGG - chr2_4:5051700-5051719 None:intergenic 45.0%
!! TGGAAAAGTGTCTGCTTAGG+AGG - chr2_4:5051724-5051743 None:intergenic 45.0%
CCTCTTCCCCATTCCAAAAT+AGG - chr2_4:5051856-5051875 None:intergenic 45.0%
!!! CCTATTTTGGAATGGGGAAG+AGG + chr2_4:5051853-5051872 Msa0310190:CDS 45.0%
TGCAAGTCTTTGCATTCCTC+AGG + chr2_4:5051924-5051943 Msa0310190:CDS 45.0%
! CCCATGAAAGCATACACAAG+AGG - chr2_4:5052245-5052264 None:intergenic 45.0%
AACGACTCCTGCAAAGAAAG+TGG - chr2_4:5052387-5052406 None:intergenic 45.0%
CTTTGCAGGAGTCGTTCAAA+TGG + chr2_4:5052391-5052410 Msa0310190:CDS 45.0%
CAACAATGGCAGCATGAGAT+AGG - chr2_4:5052534-5052553 None:intergenic 45.0%
CTATCTCATGCTGCCATTGT+TGG + chr2_4:5052532-5052551 Msa0310190:CDS 45.0%
TGCTGCCATTGTTGGATTCA+TGG + chr2_4:5052540-5052559 Msa0310190:CDS 45.0%
GCTGCCATTGTTGGATTCAT+GGG + chr2_4:5052541-5052560 Msa0310190:CDS 45.0%
TCCACCCATGAATCCAACAA+TGG - chr2_4:5052548-5052567 None:intergenic 45.0%
!!! TTTTTAAGGCAGCCCACCAT+GGG + chr2_4:5052662-5052681 Msa0310190:CDS 45.0%
ATTACAAGGGCAGACAAGGA+TGG + chr2_4:5053171-5053190 Msa0310190:CDS 45.0%
TTCTGGTATGGTAGCACTCA+CGG + chr2_4:5053381-5053400 Msa0310190:CDS 45.0%
AACAGAGAAATGGTGGCACT+AGG + chr2_4:5053549-5053568 Msa0310190:CDS 45.0%
! ACATCTTGCTATGTGGCTAC+AGG + chr2_4:5053597-5053616 Msa0310190:CDS 45.0%
TTTCATTAGCCATCATGGCG+AGG - chr2_4:5053711-5053730 None:intergenic 45.0%
TCGCTCAGCTGTGAACTATA+TGG + chr2_4:5053930-5053949 Msa0310190:CDS 45.0%
TCAGCTGTGAACTATATGGC+TGG + chr2_4:5053934-5053953 Msa0310190:CDS 45.0%
CAGAGTTAACAGCAAGACTG+TGG - chr2_4:5053992-5054011 None:intergenic 45.0%
! ATTGAGGCAAGCACTGCATT+TGG - chr2_4:5054045-5054064 None:intergenic 45.0%
ATGAAGCAGCCATTCTTCTG+TGG + chr2_4:5054097-5054116 Msa0310190:CDS 45.0%
AGGGACGGTTTGTAAAGTGA+CGG - chr2_4:5054477-5054496 None:intergenic 45.0%
ACCAAAAGTAGGTCAAGGGA+CGG - chr2_4:5054492-5054511 None:intergenic 45.0%
CTGACACCAAAAGTAGGTCA+AGG - chr2_4:5054497-5054516 None:intergenic 45.0%
ACCCTATTTATGCATGCAGG+TGG + chr2_4:5054618-5054637 Msa0310190:intron 45.0%
GCCACCTGCATGCATAAATA+GGG - chr2_4:5054622-5054641 None:intergenic 45.0%
TGCCACCTGCATGCATAAAT+AGG - chr2_4:5054623-5054642 None:intergenic 45.0%
TTCCCTAGTACTGCAGTCTT+TGG - chr2_4:5054682-5054701 None:intergenic 45.0%
CTCGAACTCCAACTACATCA+AGG + chr2_4:5054801-5054820 Msa0310190:CDS 45.0%
ACTCCAACTACATCAAGGAC+AGG + chr2_4:5054806-5054825 Msa0310190:CDS 45.0%
GCTATGCCATAACAAGCATG+TGG - chr2_4:5055429-5055448 None:intergenic 45.0%
AGTCTGATAACTTGGACGCA+TGG - chr2_4:5055623-5055642 None:intergenic 45.0%
AGTTGCAACAGCATCACCTA+CGG - chr2_4:5055673-5055692 None:intergenic 45.0%
! GGTGATGCTGTTGCAACTTT+TGG + chr2_4:5055675-5055694 Msa0310190:CDS 45.0%
!! ATTAATTTATTAATAGATAA+TGG - chr2_4:5053316-5053335 None:intergenic 5.0%
CCACCATGTCTACGTGAAGA+AGG - chr2_4:5051664-5051683 None:intergenic 50.0%
CCTTCTTCACGTAGACATGG+TGG + chr2_4:5051661-5051680 Msa0310190:CDS 50.0%
AAGAGAGACACCACAGCTAC+TGG - chr2_4:5052293-5052312 None:intergenic 50.0%
GCTTGGAAGTCTGCTTTCAG+AGG + chr2_4:5052313-5052332 Msa0310190:CDS 50.0%
GGAGTCGTTCAAATGGCACT+TGG + chr2_4:5052398-5052417 Msa0310190:CDS 50.0%
GCCATTGTTGGATTCATGGG+TGG + chr2_4:5052544-5052563 Msa0310190:CDS 50.0%
!!! GTTTTTAAGGCAGCCCACCA+TGG + chr2_4:5052661-5052680 Msa0310190:CDS 50.0%
!!! TTTTAAGGCAGCCCACCATG+GGG + chr2_4:5052663-5052682 Msa0310190:CDS 50.0%
ATGAAGGCTTACCCCATGGT+GGG - chr2_4:5052677-5052696 None:intergenic 50.0%
AATGAAGGCTTACCCCATGG+TGG - chr2_4:5052678-5052697 None:intergenic 50.0%
TGTGGCTACAGGTACCAAAG+AGG + chr2_4:5053608-5053627 Msa0310190:intron 50.0%
GTGGCTACAGGTACCAAAGA+GGG + chr2_4:5053609-5053628 Msa0310190:intron 50.0%
TGGCTGCTTCATAGTCGATC+AGG - chr2_4:5054089-5054108 None:intergenic 50.0%
! ACCGTCCCTTGACCTACTTT+TGG + chr2_4:5054488-5054507 Msa0310190:intron 50.0%
AGGCCAAAGACTGCAGTACT+AGG + chr2_4:5054676-5054695 Msa0310190:CDS 50.0%
GGCCAAAGACTGCAGTACTA+GGG + chr2_4:5054677-5054696 Msa0310190:CDS 50.0%
CAGTACTAGGGAAGCTTCCA+GGG + chr2_4:5054689-5054708 Msa0310190:CDS 50.0%
!! GTGCTGCTTTGGGATATTGC+AGG - chr2_4:5054735-5054754 None:intergenic 50.0%
!! CCTGGAATCTGTGCTGCTTT+GGG - chr2_4:5054745-5054764 None:intergenic 50.0%
TTCCAGGCATGTTGATCGTC+AGG + chr2_4:5054758-5054777 Msa0310190:CDS 50.0%
TCCAGGCATGTTGATCGTCA+GGG + chr2_4:5054759-5054778 Msa0310190:CDS 50.0%
ACAGCTTCTCTTGGCAAACC+CGG + chr2_4:5055575-5055594 Msa0310190:intron 50.0%
TGCCATAGGACCAGTAGCTG+TGG + chr2_4:5052280-5052299 Msa0310190:CDS 55.0%
CACCACAGCTACTGGTCCTA+TGG - chr2_4:5052285-5052304 None:intergenic 55.0%
GCTGTGGTGTCTCTCTTGCT+TGG + chr2_4:5052296-5052315 Msa0310190:CDS 55.0%
GCTTGCATGGGAGCCTTCTT+TGG + chr2_4:5054144-5054163 Msa0310190:CDS 55.0%
GCAGTACTAGGGAAGCTTCC+AGG + chr2_4:5054688-5054707 Msa0310190:CDS 55.0%
CCCAAAGCAGCACAGATTCC+AGG + chr2_4:5054742-5054761 Msa0310190:CDS 55.0%
!! GCCTGGAATCTGTGCTGCTT+TGG - chr2_4:5054746-5054765 None:intergenic 55.0%
ACCCTGACGATCAACATGCC+TGG - chr2_4:5054763-5054782 None:intergenic 55.0%
CAGCTTCTCTTGGCAAACCC+GGG + chr2_4:5055576-5055595 Msa0310190:intron 55.0%
TGAGGCTGTGTCAAGGGCCA+TGG + chr2_4:5051621-5051640 Msa0310190:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 5051601 5055719 5051601 ID=Msa0310190;Name=Msa0310190
chr2_4 mRNA 5051601 5055719 5051601 ID=Msa0310190-mRNA-1;Parent=Msa0310190;Name=Msa0310190-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.54|0.33|1|1|1|12|0|637
chr2_4 exon 5051601 5051945 5051601 ID=Msa0310190-mRNA-1:exon:1721;Parent=Msa0310190-mRNA-1
chr2_4 exon 5052098 5052146 5052098 ID=Msa0310190-mRNA-1:exon:1722;Parent=Msa0310190-mRNA-1
chr2_4 exon 5052225 5052429 5052225 ID=Msa0310190-mRNA-1:exon:1723;Parent=Msa0310190-mRNA-1
chr2_4 exon 5052510 5052684 5052510 ID=Msa0310190-mRNA-1:exon:1724;Parent=Msa0310190-mRNA-1
chr2_4 exon 5053090 5053203 5053090 ID=Msa0310190-mRNA-1:exon:1725;Parent=Msa0310190-mRNA-1
chr2_4 exon 5053286 5053402 5053286 ID=Msa0310190-mRNA-1:exon:1726;Parent=Msa0310190-mRNA-1
chr2_4 exon 5053492 5053618 5053492 ID=Msa0310190-mRNA-1:exon:1727;Parent=Msa0310190-mRNA-1
chr2_4 exon 5053920 5054206 5053920 ID=Msa0310190-mRNA-1:exon:1728;Parent=Msa0310190-mRNA-1
chr2_4 exon 5054637 5054827 5054637 ID=Msa0310190-mRNA-1:exon:1729;Parent=Msa0310190-mRNA-1
chr2_4 exon 5054979 5055064 5054979 ID=Msa0310190-mRNA-1:exon:1730;Parent=Msa0310190-mRNA-1
chr2_4 exon 5055154 5055230 5055154 ID=Msa0310190-mRNA-1:exon:1731;Parent=Msa0310190-mRNA-1
chr2_4 exon 5055579 5055719 5055579 ID=Msa0310190-mRNA-1:exon:1732;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5051601 5051945 5051601 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5052098 5052146 5052098 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5052225 5052429 5052225 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5052510 5052684 5052510 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5053090 5053203 5053090 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5053286 5053402 5053286 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5053492 5053618 5053492 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5053920 5054206 5053920 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5054637 5054827 5054637 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5054979 5055064 5054979 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5055154 5055230 5055154 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
chr2_4 CDS 5055579 5055719 5055579 ID=Msa0310190-mRNA-1:cds;Parent=Msa0310190-mRNA-1
Gene Sequence

>Msa0310190

ATGAGTCAAGTTTTTAGTGATGAGGCTGTGTCAAGGGCCATGGAAGAAATAAAAAGCAATCCTTCTTCACGTAGACATGGTGGTGATCATAGTCATCCACTCATGCACAAAGTGTCAAGTCCTCCTAAGCAGACACTTTTCCAAGATTTCAAACACAATTTCAATGAAACTTTCTTCTCTGATGACCCTTTTGCCAAGTTTAAAGACCAAACAAAGAAAAGAAAGTTTGTTCTTGGACTCCAATCTGTTTTCCCTATTTTGGAATGGGGAAGAGGTTACAATCTTAAAAGTTTCAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGAACCTCAGTATGCACTATATACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGAAGTCTGCTTTCAGAGGAGATCAGTGACTTCAAAAGTCCTGAATACCTTGCTCTTGCTTTTACTTCCACTTTCTTTGCAGGAGTCGTTCAAATGGCACTTGGAGTTTTAAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAGCTTAAAGGTCTTCTTGGTATAAAAAAATTCACCAAGAAAACTGATATTGTTTCTGTCATGACATCGGTTTTTAAGGCAGCCCACCATGGGGCTAAGAAGAATAAGAAACTCTTTTGGGTGTCTGCAATGTCTCCTATGATTTGTGTTATAGTGTCTACTTTATCTGTTTACATTACAAGGGCAGACAAGGATGGAGTAGCAATTGTGAGACATATTGAGAAGGGTGTCAATCCATTATCTATTAATAAATTAATTTTCAGTGGAAAATATTTTAGTGCTGCAATTCGGATTGGTTTGATTTCTGGTATGGTAGCACTCACGGAAGCTGTGGCTATTGGAAGAACATTTGCTGCTATGAAAGACTATTCACTAGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAACGTTGTTGGTTCTTTGACATCTTGCTATGTGGCTACAGGATCATTTTCTCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACTTAGTTATGTCCACAGTCTTGCTGTTAACTCTGTTAGTGATTACACCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATTATAGCTGCTGTGATGAGCCTGATCGACTATGAAGCAGCCATTCTTCTGTGGAAGATTGACAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAAGTTGGCCTTATGATTGCGGTGGCAATATCTTTTGCCAAAATTCTTTTACAAGTGACAAGGCCAAAGACTGCAGTACTAGGGAAGCTTCCAGGGACAACTGTTTATAGGAACATCCTGCAATATCCCAAAGCAGCACAGATTCCAGGCATGTTGATCGTCAGGGTTGATTCTGCGATCTATTTCTCGAACTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGCATACAGCATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATTCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAGAAATATCCAGCTTCTCTTGGCAAACCCGGGACCAATTTTAATCGAGAAGCTCCATGCGTCCAAGTTATCAGACTTAATCGGGGAAGATAAAATATTTCTAACCGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGGTTAGATTTATGA

Protein sequence

>Msa0310190

MSQVFSDEAVSRAMEEIKSNPSSRRHGGDHSHPLMHKVSSPPKQTLFQDFKHNFNETFFSDDPFAKFKDQTKKRKFVLGLQSVFPILEWGRGYNLKSFKGDLIAGLTIASLCIPQDIAYAKLANLEPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSLLSEEISDFKSPEYLALAFTSTFFAGVVQMALGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKKFTKKTDIVSVMTSVFKAAHHGAKKNKKLFWVSAMSPMICVIVSTLSVYITRADKDGVAIVRHIEKGVNPLSINKLIFSGKYFSAAIRIGLISGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNLVMSTVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLIDYEAAILLWKIDKFDFLACMGAFFGVIFKSVEVGLMIAVAISFAKILLQVTRPKTAVLGKLPGTTVYRNILQYPKAAQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQHLIVEMSPVTDIDTSGIHSFEDLLKSLKKRNIQLLLANPGPILIEKLHASKLSDLIGEDKIFLTVGDAVATFGPKGLDL*