AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083740 MtrunA17_Chr7g0273001 94.208 518 14 1 1 502 1 518 0.0 957
Msa1083740 MtrunA17_Chr6g0460831 30.285 492 292 8 55 499 95 582 2.13e-49 178
Msa1083740 MtrunA17_Chr6g0460821 30.675 489 271 12 37 468 60 537 3.84e-42 158
Msa1083740 MtrunA17_Chr7g0254091 30.750 400 230 9 59 441 95 464 1.55e-31 127
Msa1083740 MtrunA17_Chr8g0344371 32.171 258 161 4 242 492 388 638 1.40e-29 122
Msa1083740 MtrunA17_Chr8g0344371 31.818 176 110 4 43 211 115 287 3.66e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083740 AT1G08960.1 67.041 534 138 6 7 502 13 546 0.0 642
Msa1083740 AT5G17860.1 31.789 475 275 10 59 492 90 556 3.41e-57 199
Msa1083740 AT5G17860.2 32.207 444 279 10 59 492 90 521 2.09e-52 186
Msa1083740 AT5G17850.1 29.167 552 313 17 5 495 14 548 9.66e-44 162
Msa1083740 AT5G17850.2 29.167 552 313 17 5 495 14 548 9.66e-44 162
Msa1083740 AT3G14070.1 27.500 520 297 12 49 491 112 628 1.80e-42 160
Msa1083740 AT1G54115.1 32.000 250 155 4 248 491 389 629 5.18e-29 121
Msa1083740 AT1G54115.1 34.091 176 109 3 47 215 109 284 1.97e-19 92.0

Find 221 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGATTGGGTTTCAAATT+AGG 0.134965 7_2:+84077966 None:intergenic
GAGAAGTTGTTGTGATTAAG+AGG 0.182955 7_2:+84081241 None:intergenic
CGTATTGAGATTATGTTATA+TGG 0.201229 7_2:-84074967 Msa1083740:three_prime_UTR
ACAGGCAAATGCTCTGCTTT+TGG 0.211093 7_2:+84078702 None:intergenic
GGGATTATTTCCTCACTTCT+TGG 0.228457 7_2:-84075328 Msa1083740:three_prime_UTR
CACAGAGGGAAAAGAGTATT+AGG 0.243083 7_2:+84078789 None:intergenic
GATTCCGAGTGCCTAGGTTT+TGG 0.249551 7_2:-84078296 Msa1083740:CDS
TTAGGGGATAGGGGTTAGTT+AGG 0.255630 7_2:+84077984 None:intergenic
AGAGATTGGGTTTCAAATTA+GGG 0.264021 7_2:+84077967 None:intergenic
GCAATGAGTTGGATTTATTA+AGG 0.281711 7_2:+84077925 None:intergenic
AAATTAAGTTCATAGGCTTT+AGG 0.315192 7_2:+84078396 None:intergenic
ATTAGGGAGGAGGAAAACTA+TGG 0.320350 7_2:+84078806 None:intergenic
TTCGTCTCTGCTCTTGTTGT+CGG 0.331098 7_2:-84080874 Msa1083740:CDS
GATGAGGAGAATGGAGAGGG+AGG 0.338258 7_2:+84081107 None:intergenic
GAGGGAGGGGATTGAGAGGA+TGG 0.342271 7_2:+84081122 None:intergenic
CCGGAAGCACCTGTTCTTGT+TGG 0.345802 7_2:-84075532 Msa1083740:three_prime_UTR
GTGAATTGCCTTGAAGCTTT+AGG 0.347493 7_2:-84078621 Msa1083740:CDS
CCTTCGTTATGAGTGTGTTT+TGG 0.348369 7_2:-84078668 Msa1083740:CDS
CAACGAGATATCAAAGAGAT+TGG 0.350248 7_2:+84077953 None:intergenic
AACACCAAACTGAAATTTGT+TGG 0.351083 7_2:+84077626 None:intergenic
GGATTATTTCCTCACTTCTT+GGG 0.352175 7_2:-84075327 Msa1083740:three_prime_UTR
CATCCGGCCATTGCCATTGC+CGG 0.357339 7_2:+84078492 None:intergenic
GCAATGGCCGGATGCTTTGC+TGG 0.358095 7_2:-84078483 Msa1083740:CDS
AACAATCCATTTGGCCCACC+TGG 0.365523 7_2:+84075097 None:intergenic
TGTTGGTCTTGGAACTGCTT+TGG 0.368704 7_2:-84078442 Msa1083740:CDS
CCAACAAGAACAGGTGCTTC+CGG 0.371746 7_2:+84075532 None:intergenic
TACTTTGACTGCACAAAACT+TGG 0.387919 7_2:-84075215 Msa1083740:three_prime_UTR
CCTCAATCTCTCTCCTAGTA+TGG 0.388430 7_2:-84081013 Msa1083740:CDS
CGACATTAGCTAAGAGCATT+TGG 0.389034 7_2:-84075450 Msa1083740:three_prime_UTR
CTTCATAGAAAGATTTAGAT+AGG 0.389924 7_2:-84078192 Msa1083740:three_prime_UTR
GGTCAATACCGTACCGGCTT+CGG 0.391101 7_2:-84080919 Msa1083740:CDS
TTCTATATTGTTGCATTGCA+TGG 0.391207 7_2:-84075180 Msa1083740:three_prime_UTR
AAACTATTTAAGAAGAAAAC+TGG 0.396532 7_2:-84078102 Msa1083740:three_prime_UTR
TTTAACATGCTTGTTGGTCT+TGG 0.397900 7_2:-84078453 Msa1083740:CDS
CTCTCAAGCTTAGTGCTAGA+AGG 0.399250 7_2:-84075061 Msa1083740:three_prime_UTR
TATTCCAACAAATTTCAGTT+TGG 0.399670 7_2:-84077630 Msa1083740:three_prime_UTR
TGAGGAGAATGGAGAGGGAG+GGG 0.401522 7_2:+84081109 None:intergenic
CAACAAGAACAGGTGCTTCC+GGG 0.405795 7_2:+84075533 None:intergenic
AAAACCTAGGCACTCGGAAT+CGG 0.406998 7_2:+84078298 None:intergenic
GAGGATTAGTGAGAGTGAAA+TGG 0.411408 7_2:+84081308 None:intergenic
TAGTGGACAAAGAGCGATAT+TGG 0.413049 7_2:+84078872 None:intergenic
ATTGAGAGGATGGGAGTTTG+AGG 0.414253 7_2:+84081132 None:intergenic
AGCTTGTTCTGTTGCCCGAC+AGG 0.414924 7_2:+84076120 None:intergenic
GGGTTTCAAATTAGGGGATA+GGG 0.416477 7_2:+84077974 None:intergenic
AAATGACCTTCAAAACTTCA+TGG 0.416645 7_2:+84077596 None:intergenic
GAGGGATTGTCAATCTTAAG+AGG 0.419753 7_2:+84078934 None:intergenic
CATTGCGATGGTGCTGGTTG+AGG 0.420449 7_2:+84078915 None:intergenic
TGTACTTGCAACAAATTTCC+AGG 0.422420 7_2:+84075557 None:intergenic
TGGATTGAATGGGGCAAGAT+GGG 0.423000 7_2:+84081187 None:intergenic
ACAAACGGCGCCGGATCAAC+GGG 0.425874 7_2:+84080823 None:intergenic
GTTACCTAGGAAAATCGTTA+TGG 0.427493 7_2:+84075664 None:intergenic
TAGGGGATAGGGGTTAGTTA+GGG 0.431453 7_2:+84077985 None:intergenic
CGGAATTACAAAAGCTGAAG+TGG 0.438591 7_2:-84075351 Msa1083740:three_prime_UTR
GCTAGAAGGTTAATACTAGA+AGG 0.445809 7_2:-84075047 Msa1083740:three_prime_UTR
TGGGTTTCAAATTAGGGGAT+AGG 0.449743 7_2:+84077973 None:intergenic
TGGAGAGGGAGGGGATTGAG+AGG 0.453858 7_2:+84081118 None:intergenic
GCATTTGCCTGTGGTGGTTG+TGG 0.453910 7_2:-84078691 Msa1083740:CDS
GATGCCGCCATTGGATTGAA+TGG 0.456465 7_2:+84081176 None:intergenic
AACGAGATATCAAAGAGATT+GGG 0.460124 7_2:+84077954 None:intergenic
GGATGTAGAAATGGAGGATG+AGG 0.460612 7_2:+84081091 None:intergenic
AAACCTAGGCACTCGGAATC+GGG 0.460770 7_2:+84078299 None:intergenic
CTTTCTCTCCATCAGCCACT+TGG 0.461429 7_2:+84074998 None:intergenic
TTGGATTGAATGGGGCAAGA+TGG 0.462224 7_2:+84081186 None:intergenic
GGAATAAGAAAGAACTGAGT+GGG 0.463568 7_2:-84075026 Msa1083740:three_prime_UTR
AGAAACCAGGTATCAAGAAC+TGG 0.465897 7_2:+84078055 None:intergenic
ATGCCGCCATTGGATTGAAT+GGG 0.469388 7_2:+84081177 None:intergenic
AAACAATCAACTTGAAAAGA+TGG 0.469803 7_2:+84078218 None:intergenic
CCAATGTTTAACATGCTTGT+TGG 0.469958 7_2:-84078459 Msa1083740:CDS
TTGAGAGGATGGGAGTTTGA+GGG 0.470188 7_2:+84081133 None:intergenic
TCAATTCAAGAAGGCCTGTC+GGG 0.472852 7_2:-84076134 Msa1083740:three_prime_UTR
ACGAAGGCCACAACCACCAC+AGG 0.474486 7_2:+84078684 None:intergenic
ATTGCGATGGTGCTGGTTGA+GGG 0.474576 7_2:+84078916 None:intergenic
GAAGCGTGCCTAAAGCTTCA+AGG 0.475284 7_2:+84078613 None:intergenic
TAGGTCTTACCGTGCTAGCA+TGG 0.482485 7_2:-84078569 Msa1083740:CDS
TGGAAACAACCAACAAGAAC+AGG 0.482886 7_2:+84075523 None:intergenic
CCACTAGTCAAATGATGTAA+TGG 0.483396 7_2:-84075503 Msa1083740:three_prime_UTR
GTTGTTGTGATTAAGAGGGA+TGG 0.483470 7_2:+84081246 None:intergenic
GACAGGAAGCTCCCATGCCT+TGG 0.483478 7_2:+84078962 None:intergenic
AAACTGCCGCAGGCATTCCT+AGG 0.484727 7_2:-84078588 Msa1083740:CDS
AGCTTTCTTCTCTTGAAGCT+CGG 0.488783 7_2:-84077668 Msa1083740:three_prime_UTR
GGCGCCGGATCAACGGGAAA+AGG 0.489382 7_2:+84080829 None:intergenic
CCATTACATCATTTGACTAG+TGG 0.490989 7_2:+84075503 None:intergenic
AATTGGTTTATAAAATTGCC+CGG 0.491181 7_2:+84075142 None:intergenic
AACGTGGAAATTAAGTTCAT+AGG 0.491726 7_2:+84078389 None:intergenic
GCGAGAGATGAGAAGACGTC+GGG 0.494583 7_2:+84080955 None:intergenic
AGGAACCCAGGTGGGCCAAA+TGG 0.494754 7_2:-84075103 Msa1083740:three_prime_UTR
CACGCTTCTCAAACTGCCGC+AGG 0.495555 7_2:-84078598 Msa1083740:CDS
GAAATGGAGGATGAGGAGAA+TGG 0.496656 7_2:+84081098 None:intergenic
GAGGATGAGGAGAATGGAGA+GGG 0.497270 7_2:+84081104 None:intergenic
ACAGAGGGAAAAGAGTATTA+GGG 0.497292 7_2:+84078790 None:intergenic
AAAATCCAGTTCTTGATACC+TGG 0.497752 7_2:-84078060 Msa1083740:three_prime_UTR
TCTTTCTCTATTGAAGATTG+AGG 0.498027 7_2:-84077774 Msa1083740:intron
TAGTTGTGACGATTGAGAAA+TGG 0.500180 7_2:+84081049 None:intergenic
GGAAAAGAGTATTAGGGAGG+AGG 0.503216 7_2:+84078796 None:intergenic
GTGAGAGACGAGGAGAAACC+AGG 0.503320 7_2:+84078042 None:intergenic
CTTACTACCAGAGCATCAAA+TGG 0.503841 7_2:-84076179 Msa1083740:three_prime_UTR
AGAAGTTGTTGTGATTAAGA+GGG 0.504857 7_2:+84081242 None:intergenic
GCTTACAGATTTCCAAGGCA+TGG 0.505102 7_2:-84078974 Msa1083740:intron
AACAAACGGCGCCGGATCAA+CGG 0.505525 7_2:+84080822 None:intergenic
GTAGTTGAGGATGCCGCCAT+TGG 0.505638 7_2:+84081167 None:intergenic
AGTTGCTAAAGCTGGTCATC+CGG 0.505727 7_2:-84078511 Msa1083740:CDS
GCCGTCACACTTCTCGCTCT+CGG 0.506649 7_2:-84080988 Msa1083740:CDS
TGCAATGCAACAATATAGAA+AGG 0.507983 7_2:+84075183 None:intergenic
AGGTGGGCCAAATGGATTGT+TGG 0.510861 7_2:-84075095 Msa1083740:three_prime_UTR
GTGATTAAGAGGGATGGAGA+GGG 0.514627 7_2:+84081252 None:intergenic
TGGTCATCCGGCAATGGCAA+TGG 0.515868 7_2:-84078499 Msa1083740:CDS
CTGTTCCATTGCGATGGTGC+TGG 0.516010 7_2:+84078909 None:intergenic
CCATACTAGGAGAGAGATTG+AGG 0.516197 7_2:+84081013 None:intergenic
AAGAGTTCTGCGGATCTTGA+GGG 0.516492 7_2:-84080640 Msa1083740:CDS
AAAGAGTTCTGCGGATCTTG+AGG 0.517795 7_2:-84080641 Msa1083740:CDS
ATTAAGAGGGATGGAGAGGG+AGG 0.519227 7_2:+84081255 None:intergenic
AGTGTGACGGCGGCCATACT+AGG 0.520260 7_2:+84081000 None:intergenic
GTATTGAGATTATGTTATAT+GGG 0.521674 7_2:-84074966 Msa1083740:three_prime_UTR
ATGAGGAGAATGGAGAGGGA+GGG 0.521792 7_2:+84081108 None:intergenic
AAAACTATGGGATGATTAAG+TGG 0.522490 7_2:+84078819 None:intergenic
AACAACACATCTCTAACAAA+CGG 0.524091 7_2:+84080808 None:intergenic
TTTGGGAATGGCCAATCGGA+GGG 0.524305 7_2:-84080665 Msa1083740:CDS
CATTGGTCCAGCAAAGCATC+CGG 0.524643 7_2:+84078476 None:intergenic
GGTTTCAAATTAGGGGATAG+GGG 0.533769 7_2:+84077975 None:intergenic
AGCAGAGACGAAAGCACCGG+CGG 0.534152 7_2:+84080885 None:intergenic
GAGAGGAGAGAGTATTATCA+AGG 0.536518 7_2:-84074932 Msa1083740:three_prime_UTR
CATCCGGCAATGGCAATGGC+CGG 0.540312 7_2:-84078495 Msa1083740:CDS
CTTACAGATTTCCAAGGCAT+GGG 0.541325 7_2:-84078973 Msa1083740:intron
TCAATGACGAAGAGCAGTGC+AGG 0.542295 7_2:-84076093 Msa1083740:intron
ACCCCATGAGGCTTAAAAGC+AGG 0.545048 7_2:+84078343 None:intergenic
AGGTCTTACCGTGCTAGCAT+GGG 0.548021 7_2:-84078568 Msa1083740:CDS
GGGAGTCACGAGCAATGAGT+TGG 0.549283 7_2:+84077914 None:intergenic
AGGGAGGGGATTGAGAGGAT+GGG 0.549440 7_2:+84081123 None:intergenic
AGGACCAGTGTTAGGAACCC+AGG 0.550048 7_2:-84075115 Msa1083740:three_prime_UTR
GTTTATGCGTATTTGACACC+TGG 0.550987 7_2:-84075575 Msa1083740:three_prime_UTR
CGCGCCGGTCAATACCGTAC+CGG 0.551721 7_2:-84080925 Msa1083740:CDS
GGTCCCGATTCCGAGTGCCT+AGG 0.552227 7_2:-84078302 Msa1083740:CDS
TGAGTTGAGTGTGAGAGACG+AGG 0.553112 7_2:+84078032 None:intergenic
TTTCTTGTCTACAGTTACCT+AGG 0.553185 7_2:+84075651 None:intergenic
AATCTTAAGAGGGTTGAGAC+AGG 0.554164 7_2:+84078945 None:intergenic
CCCACCTGGGTTCCTAACAC+TGG 0.554568 7_2:+84075111 None:intergenic
GGGGTTGTCCAAGTGGCTGA+TGG 0.555275 7_2:-84075006 Msa1083740:three_prime_UTR
TAACTGTAGACAAGAAATGT+TGG 0.558214 7_2:-84075645 Msa1083740:three_prime_UTR
TTCGGCGCTATACTCTCCGC+CGG 0.558460 7_2:-84080901 Msa1083740:CDS
TCTCTCGCCGCTCTTCGCGC+CGG 0.558505 7_2:-84080940 Msa1083740:CDS
GTCAAATACGCATAAACTTG+TGG 0.560739 7_2:+84075581 None:intergenic
TTCAATTCAAGAAGGCCTGT+CGG 0.561563 7_2:-84076135 Msa1083740:three_prime_UTR
GAGATTGGGTTTCAAATTAG+GGG 0.562024 7_2:+84077968 None:intergenic
CATGCATACAAGAGGGCTAG+TGG 0.564229 7_2:+84078855 None:intergenic
AGAAGATGATAATGAGAGTG+AGG 0.566303 7_2:+84081289 None:intergenic
ACACTTCTCGCTCTCGGTAA+CGG 0.567195 7_2:-84080982 Msa1083740:CDS
AGGAATAAGAAAGAACTGAG+TGG 0.567355 7_2:-84075027 Msa1083740:three_prime_UTR
TGAGGAATAGCAATGGAAAG+TGG 0.567770 7_2:-84075606 Msa1083740:three_prime_UTR
TGGATTTGGGAATGGCCAAT+CGG 0.570540 7_2:-84080669 Msa1083740:CDS
TGTGATTAAGAGGGATGGAG+AGG 0.573624 7_2:+84081251 None:intergenic
TCTTGCCCCATTCAATCCAA+TGG 0.576988 7_2:-84081183 Msa1083740:CDS
TGATGAGGATGTAGAAATGG+AGG 0.577881 7_2:+84081085 None:intergenic
GATGTTGCAGTTGCTAAAGC+TGG 0.582356 7_2:-84078519 Msa1083740:CDS
GGAGAGTATAGCGCCGAAGC+CGG 0.582657 7_2:+84080906 None:intergenic
ATCCCCAAAACCTAGGCACT+CGG 0.583255 7_2:+84078292 None:intergenic
CTCAACCAGCACCATCGCAA+TGG 0.584181 7_2:-84078914 Msa1083740:CDS
AGGGATTGTCAATCTTAAGA+GGG 0.584931 7_2:+84078935 None:intergenic
GGTCTCTCTTAGTAATCACT+TGG 0.585616 7_2:-84078323 Msa1083740:CDS
GGATTGAATGGGGCAAGATG+GGG 0.586530 7_2:+84081188 None:intergenic
GGAGGATGAGGAGAATGGAG+AGG 0.588369 7_2:+84081103 None:intergenic
TGAATTTCCCCATGCTAGCA+CGG 0.589057 7_2:+84078560 None:intergenic
ACAATCCATTTGGCCCACCT+GGG 0.590622 7_2:+84075098 None:intergenic
GCTAGCATGGGGAAATTCAG+TGG 0.592549 7_2:-84078556 Msa1083740:CDS
GAAGCCGGTACGGTATTGAC+CGG 0.592685 7_2:+84080921 None:intergenic
ATTTGGGAATGGCCAATCGG+AGG 0.593231 7_2:-84080666 Msa1083740:CDS
TATGAACTTAATTTCCACGT+TGG 0.594331 7_2:-84078387 Msa1083740:CDS
GGAATTACAAAAGCTGAAGT+GGG 0.594798 7_2:-84075350 Msa1083740:three_prime_UTR
AATTTGTTGCAAGTACATCC+CGG 0.595795 7_2:-84075551 Msa1083740:three_prime_UTR
AAGATGGGGCGATGTTGTTG+AGG 0.596259 7_2:+84081202 None:intergenic
CTAGCATGGGGAAATTCAGT+GGG 0.597425 7_2:-84078555 Msa1083740:CDS
TAAAGCTGGTCATCCGGCAA+TGG 0.598791 7_2:-84078505 Msa1083740:CDS
TTAGGGAGGAGGAAAACTAT+GGG 0.599981 7_2:+84078807 None:intergenic
AGCAGAGCATTTGCCTGTGG+TGG 0.606627 7_2:-84078697 Msa1083740:CDS
GTATAGCGCCGAAGCCGGTA+CGG 0.607381 7_2:+84080911 None:intergenic
TGAACACTACGGACCACAGA+GGG 0.608035 7_2:+84078775 None:intergenic
GTATTGACCGGCGCGAAGAG+CGG 0.613005 7_2:+84080933 None:intergenic
ATGAGTTACATGCATACAAG+AGG 0.615518 7_2:+84078847 None:intergenic
ATGCTAGCACGGTAAGACCT+AGG 0.615531 7_2:+84078571 None:intergenic
CCAACAAGCATGTTAAACAT+TGG 0.616677 7_2:+84078459 None:intergenic
AGACAGAATCCCCAAAACCT+AGG 0.616693 7_2:+84078285 None:intergenic
AAGAGCAGAGACGAAAGCAC+CGG 0.618004 7_2:+84080882 None:intergenic
AAAAGCATGAGGAATAGCAA+TGG 0.621608 7_2:-84075613 Msa1083740:three_prime_UTR
TGCTCTTAGCTAATGTCGTG+TGG 0.623659 7_2:+84075455 None:intergenic
GATTGAGAAATGGTGAGAAG+CGG 0.626670 7_2:+84081059 None:intergenic
ACCGAGAGCGAGAAGTGTGA+CGG 0.626907 7_2:+84080987 None:intergenic
ACATCTCTAACAAACGGCGC+CGG 0.629400 7_2:+84080814 None:intergenic
GGCGAGAGATGAGAAGACGT+CGG 0.634201 7_2:+84080954 None:intergenic
ATTCACGAGCTCTCCAGCTG+TGG 0.642513 7_2:+84078638 None:intergenic
GGAAAATGCAGTGGTAGTTG+AGG 0.644910 7_2:+84081154 None:intergenic
ATAATTGCTCCCAAGAAGTG+AGG 0.648626 7_2:+84075318 None:intergenic
TAAAATCTGTTCCATTGCGA+TGG 0.654446 7_2:+84078903 None:intergenic
TGCCCCATTCAATCCAATGG+CGG 0.655644 7_2:-84081180 Msa1083740:CDS
GAATAAGAAAGAACTGAGTG+GGG 0.657253 7_2:-84075025 Msa1083740:three_prime_UTR
GGTCTTACCGTGCTAGCATG+GGG 0.659113 7_2:-84078567 Msa1083740:CDS
TGCCGCCATTGGATTGAATG+GGG 0.659131 7_2:+84081178 None:intergenic
GAATTACAAAAGCTGAAGTG+GGG 0.665958 7_2:-84075349 Msa1083740:three_prime_UTR
AATTACAAAAGCTGAAGTGG+GGG 0.666599 7_2:-84075348 Msa1083740:three_prime_UTR
TTGAGGAGTGATCTACGAAG+AGG 0.667500 7_2:+84081219 None:intergenic
TGAGTTACATGCATACAAGA+GGG 0.668778 7_2:+84078848 None:intergenic
ACTCTGCTTACAGATTTCCA+AGG 0.670878 7_2:-84078979 Msa1083740:intron
GAGGGAAAAGAGTATTAGGG+AGG 0.671135 7_2:+84078793 None:intergenic
AATACTTGTTATCTGTACCA+CGG 0.673474 7_2:+84075717 None:intergenic
ATGAACACTACGGACCACAG+AGG 0.674220 7_2:+84078774 None:intergenic
GAGTTTGAGGGAAAATGCAG+TGG 0.675343 7_2:+84081145 None:intergenic
CCAAAACACACTCATAACGA+AGG 0.680133 7_2:+84078668 None:intergenic
AAAAGCAGAGCATTTGCCTG+TGG 0.684107 7_2:-84078700 Msa1083740:CDS
CCAGTGTTAGGAACCCAGGT+GGG 0.686416 7_2:-84075111 Msa1083740:three_prime_UTR
ACTGAGTGGGGTTGTCCAAG+TGG 0.689096 7_2:-84075013 Msa1083740:three_prime_UTR
GCGCTCTTTGAATGGAACCG+TGG 0.689244 7_2:-84075734 Msa1083740:three_prime_UTR
GAAGCTTGTCATGAACACTA+CGG 0.689618 7_2:+84078764 None:intergenic
ATAGAACGCAACGAATCCAA+CGG 0.692109 7_2:+84080720 None:intergenic
TCGGAGGGAAAAGAGTTCTG+CGG 0.694446 7_2:-84080650 Msa1083740:CDS
GGAACTATGTGAAAAGCATG+AGG 0.695196 7_2:-84075624 Msa1083740:three_prime_UTR
ACCAGTGTTAGGAACCCAGG+TGG 0.705970 7_2:-84075112 Msa1083740:three_prime_UTR
TATGGGTGCTGACTGCTGAG+AGG 0.708788 7_2:-84074949 Msa1083740:three_prime_UTR
AGCATGGGGAAATTCAGTGG+GGG 0.714129 7_2:-84078553 Msa1083740:CDS
GTAAGACCTAGGAATGCCTG+CGG 0.717066 7_2:+84078582 None:intergenic
GAGAGCGAGAAGTGTGACGG+CGG 0.717520 7_2:+84080990 None:intergenic
TTACTAAGAGAGACCCCATG+AGG 0.728107 7_2:+84078331 None:intergenic
TAGCATGGGGAAATTCAGTG+GGG 0.756066 7_2:-84078554 Msa1083740:CDS
ATGCAATCACTATACCAACG+TGG 0.773379 7_2:+84078373 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAATTTTAATCATTATT+AGG + chr7_2:84076270-84076289 None:intergenic 10.0%
!! ATAATTAAATAAAATATTCC+TGG - chr7_2:84077093-84077112 Msa1083740:intron 10.0%
!! TAATTAAATAAAATATTCCT+GGG - chr7_2:84077094-84077113 Msa1083740:intron 10.0%
!!! ATTTTATAAACCAATTTTTT+AGG - chr7_2:84081068-84081087 Msa1083740:CDS 10.0%
!!! GAATTTTCTTATATTATTGA+AGG + chr7_2:84076132-84076151 None:intergenic 15.0%
!! AATTCAATTCAAAAGATTAA+TGG - chr7_2:84076282-84076301 Msa1083740:intron 15.0%
!!! CTAGAATAATTATTTGTTTT+TGG - chr7_2:84078500-84078519 Msa1083740:CDS 15.0%
!!! AATAATTATTTGTTTTTGGT+TGG - chr7_2:84078504-84078523 Msa1083740:CDS 15.0%
!! TTACTAATGTAATCTTTAAT+TGG - chr7_2:84080155-84080174 Msa1083740:intron 15.0%
!! AATATGAAATACAATTGAAA+AGG + chr7_2:84080318-84080337 None:intergenic 15.0%
!! AACTATATAAATTTACATTC+TGG + chr7_2:84080424-84080443 None:intergenic 15.0%
!!! ATTCAAAAGATTAATGGTTT+TGG - chr7_2:84076288-84076307 Msa1083740:intron 20.0%
!!! TTTTTGATAATACAGTAATC+TGG - chr7_2:84076348-84076367 Msa1083740:intron 20.0%
!!! TTTTGATAATACAGTAATCT+GGG - chr7_2:84076349-84076368 Msa1083740:intron 20.0%
!! GAAGATAATTTGAATTTAGA+AGG - chr7_2:84076733-84076752 Msa1083740:intron 20.0%
!! TGAAAAGATTAACAAGTTAA+TGG + chr7_2:84076800-84076819 None:intergenic 20.0%
!!! TAATCTTTTCACACATAATA+TGG - chr7_2:84076809-84076828 Msa1083740:intron 20.0%
!!! AATCTTTTCACACATAATAT+GGG - chr7_2:84076810-84076829 Msa1083740:intron 20.0%
!! CAATTACTATCATATCAAAT+GGG + chr7_2:84076979-84076998 None:intergenic 20.0%
!! ACAATTACTATCATATCAAA+TGG + chr7_2:84076980-84076999 None:intergenic 20.0%
!!! ATTTTTAAAGTGCTACATTT+TGG + chr7_2:84078077-84078096 None:intergenic 20.0%
!!! GTTTTCTTCTTAAATAGTTT+GGG + chr7_2:84078101-84078120 None:intergenic 20.0%
!!! AGTTTTCTTCTTAAATAGTT+TGG + chr7_2:84078102-84078121 None:intergenic 20.0%
!! AAACTATTTAAGAAGAAAAC+TGG - chr7_2:84078101-84078120 Msa1083740:three_prime_UTR 20.0%
!! TTATGAAGTATGAATGATTA+TGG - chr7_2:84078687-84078706 Msa1083740:CDS 20.0%
!!! TTTTTCTACTAAATAACTAC+AGG + chr7_2:84079131-84079150 None:intergenic 20.0%
!! TGTAGTTATTTAGTAGAAAA+AGG - chr7_2:84079130-84079149 Msa1083740:intron 20.0%
!! TTGTTACATTATCTTACAAA+GGG - chr7_2:84079509-84079528 Msa1083740:intron 20.0%
!!! ATACCTGTTATTTATTATCT+AGG - chr7_2:84079914-84079933 Msa1083740:intron 20.0%
!! ATTCCTAGATAATAAATAAC+AGG + chr7_2:84079920-84079939 None:intergenic 20.0%
!! TTGAATTGATAAACAAGAAA+CGG + chr7_2:84079963-84079982 None:intergenic 20.0%
!!! ATCTTTAATTGGTTTTCTTT+TGG - chr7_2:84080166-84080185 Msa1083740:intron 20.0%
!! ATATAAATTTACATTCTGGA+TGG + chr7_2:84080420-84080439 None:intergenic 20.0%
!!! TAAAACTTTTTAGAAATGTG+TGG + chr7_2:84080913-84080932 None:intergenic 20.0%
!!! TTGATGGTATATATTTTGTT+TGG - chr7_2:84080960-84080979 Msa1083740:CDS 20.0%
!! GTATTGAGATTATGTTATAT+GGG - chr7_2:84081237-84081256 Msa1083740:CDS 20.0%
!! TTTTGTGTTTTACATGGATT+TGG - chr7_2:84075520-84075539 Msa1083740:three_prime_UTR 25.0%
!! TTTGTGTTTTACATGGATTT+GGG - chr7_2:84075521-84075540 Msa1083740:three_prime_UTR 25.0%
!! TTTATCTTTTTCTACAGATC+CGG + chr7_2:84075621-84075640 None:intergenic 25.0%
! GATATAATTCATTCATAGCT+TGG - chr7_2:84075904-84075923 Msa1083740:intron 25.0%
!! GAAAAATTAGTTTACACTGA+CGG - chr7_2:84075965-84075984 Msa1083740:intron 25.0%
!! ACCTGATTTTGAATAAAACA+GGG + chr7_2:84076009-84076028 None:intergenic 25.0%
!! AACCTGATTTTGAATAAAAC+AGG + chr7_2:84076010-84076029 None:intergenic 25.0%
!!! TACTTATTAGTTAACTTGCT+TGG - chr7_2:84076053-84076072 Msa1083740:intron 25.0%
!!! TTCTAAAATTGGTTACTCAT+AGG - chr7_2:84076079-84076098 Msa1083740:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr7_2:84076385-84076404 Msa1083740:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr7_2:84076527-84076546 Msa1083740:intron 25.0%
! GATCTATCAAAAACCATATT+TGG + chr7_2:84076567-84076586 None:intergenic 25.0%
! TACAACTCATCATACAAAAA+AGG + chr7_2:84076673-84076692 None:intergenic 25.0%
!! ATCTTTTCACACATAATATG+GGG - chr7_2:84076811-84076830 Msa1083740:intron 25.0%
!! GTTCTTTTTCCAATACAAAA+TGG + chr7_2:84077479-84077498 None:intergenic 25.0%
! AAATTAAGTTCATAGGCTTT+AGG + chr7_2:84077810-84077829 None:intergenic 25.0%
! AAACAATCAACTTGAAAAGA+TGG + chr7_2:84077988-84078007 None:intergenic 25.0%
! CTTCATAGAAAGATTTAGAT+AGG - chr7_2:84078011-84078030 Msa1083740:three_prime_UTR 25.0%
!!! CTACATTTTGGTTTTGAATA+TGG + chr7_2:84078065-84078084 None:intergenic 25.0%
!!! TGTATTTTAGAATGCACTAA+GGG + chr7_2:84078312-84078331 None:intergenic 25.0%
!!! TTCATTCATGCAATTTGTTT+TGG - chr7_2:84078471-84078490 Msa1083740:CDS 25.0%
! TATTCCAACAAATTTCAGTT+TGG - chr7_2:84078573-84078592 Msa1083740:CDS 25.0%
!!! TTGTGTTTTCATATTTGCTA+TGG - chr7_2:84078760-84078779 Msa1083740:CDS 25.0%
! ACAGTTGAAAATATTGAACA+AGG - chr7_2:84078965-84078984 Msa1083740:CDS 25.0%
! CAGTTGAAAATATTGAACAA+GGG - chr7_2:84078966-84078985 Msa1083740:CDS 25.0%
! TTTCATGTCTCTTAGAATTT+GGG - chr7_2:84079155-84079174 Msa1083740:intron 25.0%
!! TGATTATTTCTTGAGAAGAT+AGG - chr7_2:84079456-84079475 Msa1083740:intron 25.0%
! CTTTGTAAGATAATGTAACA+AGG + chr7_2:84079510-84079529 None:intergenic 25.0%
! CTTGTTACATTATCTTACAA+AGG - chr7_2:84079508-84079527 Msa1083740:intron 25.0%
! TGTTACATTATCTTACAAAG+GGG - chr7_2:84079510-84079529 Msa1083740:intron 25.0%
! GATAATAAATAACAGGTATG+TGG + chr7_2:84079913-84079932 None:intergenic 25.0%
! ATGGAAAAAAGAGATGAAAA+AGG - chr7_2:84080043-84080062 Msa1083740:intron 25.0%
!! AAAAGGTTTTCAATTCAAGA+AGG - chr7_2:84080060-84080079 Msa1083740:intron 25.0%
!! TTGGTTGACCTATTTTATTA+TGG - chr7_2:84080226-84080245 Msa1083740:intron 25.0%
! TTGTTGCTCCATAATAAAAT+AGG + chr7_2:84080237-84080256 None:intergenic 25.0%
!! TGTATTTTATTGTTCTGTGT+GGG - chr7_2:84080777-84080796 Msa1083740:CDS 25.0%
!!! ATTTCTTTGTCACTTTTACA+CGG - chr7_2:84080825-84080844 Msa1083740:CDS 25.0%
!! AATTGGTTTATAAAATTGCC+CGG + chr7_2:84081064-84081083 None:intergenic 25.0%
! CGTATTGAGATTATGTTATA+TGG - chr7_2:84081236-84081255 Msa1083740:CDS 25.0%
AGAAGTTGTTGTGATTAAGA+GGG + chr7_2:84074964-84074983 None:intergenic 30.0%
! TTTTGATGAGGATGTAGAAA+TGG + chr7_2:84075124-84075143 None:intergenic 30.0%
AACAACACATCTCTAACAAA+CGG + chr7_2:84075398-84075417 None:intergenic 30.0%
!! TTAGTGCTGAGATTTTTCTA+TGG - chr7_2:84075456-84075475 Msa1083740:three_prime_UTR 30.0%
!!! TGTTGGTTTTGTGTTTTACA+TGG - chr7_2:84075514-84075533 Msa1083740:three_prime_UTR 30.0%
!! ACTTTCAATTAGCTTTGTGA+TGG - chr7_2:84075685-84075704 Msa1083740:three_prime_UTR 30.0%
!!! AATTAGCTTTGTGATGGTTT+TGG - chr7_2:84075691-84075710 Msa1083740:three_prime_UTR 30.0%
GACAATGCATAAAATATGCA+AGG - chr7_2:84075766-84075785 Msa1083740:intron 30.0%
!!! ACGTATTTTTTCTTTGGTAG+TGG + chr7_2:84075811-84075830 None:intergenic 30.0%
!!! AAGCACACGTATTTTTTCTT+TGG + chr7_2:84075817-84075836 None:intergenic 30.0%
!! TCCCTGTTTTATTCAAAATC+AGG - chr7_2:84076005-84076024 Msa1083740:intron 30.0%
!! TTGCTTGGACTTTCTAAAAT+TGG - chr7_2:84076068-84076087 Msa1083740:intron 30.0%
CATTGTTTCAAGGTTACATA+TGG + chr7_2:84076217-84076236 None:intergenic 30.0%
CATATGTAACCTTGAAACAA+TGG - chr7_2:84076215-84076234 Msa1083740:intron 30.0%
CTCAGTTATAGTAGAAAAGT+TGG - chr7_2:84076374-84076393 Msa1083740:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr7_2:84076451-84076470 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr7_2:84076452-84076471 Msa1083740:intron 30.0%
! TTTTCTAATGGTTTCTCGAA+TGG + chr7_2:84076520-84076539 None:intergenic 30.0%
! CACCTCTAAATCTTTTCTAA+TGG + chr7_2:84076532-84076551 None:intergenic 30.0%
! GAATGAGTTGAATCCAAATA+TGG - chr7_2:84076551-84076570 Msa1083740:intron 30.0%
! TGGTTTTTGATAGATCACTA+TGG - chr7_2:84076571-84076590 Msa1083740:intron 30.0%
TGTATGATGAGTTGTAGTAA+TGG - chr7_2:84076677-84076696 Msa1083740:intron 30.0%
CACAATCGTTATTTATGTTG+TGG - chr7_2:84076764-84076783 Msa1083740:intron 30.0%
! TCTTTTCACACATAATATGG+GGG - chr7_2:84076812-84076831 Msa1083740:intron 30.0%
ATTTAATGTCTACCGACAAA+GGG + chr7_2:84076854-84076873 None:intergenic 30.0%
TAAAGTCTACTATCACTAAG+TGG + chr7_2:84077029-84077048 None:intergenic 30.0%
TTAGTGATAGTAGACTTTAG+TGG - chr7_2:84077030-84077049 Msa1083740:intron 30.0%
!!! CCTATCTAATTTTTTTACCC+AGG + chr7_2:84077114-84077133 None:intergenic 30.0%
CCTGGGTAAAAAAATTAGAT+AGG - chr7_2:84077111-84077130 Msa1083740:intron 30.0%
! ATGGAACAGATTTTATGCAT+CGG - chr7_2:84077308-84077327 Msa1083740:intron 30.0%
AAAACTATGGGATGATTAAG+TGG + chr7_2:84077387-84077406 None:intergenic 30.0%
! TGCATTTCTCCATTTTGTAT+TGG - chr7_2:84077467-84077486 Msa1083740:intron 30.0%
AACGTGGAAATTAAGTTCAT+AGG + chr7_2:84077817-84077836 None:intergenic 30.0%
TATGAACTTAATTTCCACGT+TGG - chr7_2:84077816-84077835 Msa1083740:three_prime_UTR 30.0%
!!! AGGCCTCTATATTGTTTTTA+TGG - chr7_2:84077944-84077963 Msa1083740:three_prime_UTR 30.0%
CTGCCATAAAAACAATATAG+AGG + chr7_2:84077950-84077969 None:intergenic 30.0%
!! CAAAACTTGTGTTTTTGAAC+AGG + chr7_2:84078037-84078056 None:intergenic 30.0%
!!! ATTTTTTGCACAAAACGGAA+CGG + chr7_2:84078128-84078147 None:intergenic 30.0%
!!! ACTGGATTTTTTGCACAAAA+CGG + chr7_2:84078133-84078152 None:intergenic 30.0%
AGAGATTGGGTTTCAAATTA+GGG + chr7_2:84078239-84078258 None:intergenic 30.0%
AAGAGATTGGGTTTCAAATT+AGG + chr7_2:84078240-84078259 None:intergenic 30.0%
AACGAGATATCAAAGAGATT+GGG + chr7_2:84078252-84078271 None:intergenic 30.0%
! GCAATGAGTTGGATTTATTA+AGG + chr7_2:84078281-84078300 None:intergenic 30.0%
!!! GTGTATTTTAGAATGCACTA+AGG + chr7_2:84078313-84078332 None:intergenic 30.0%
TCTTTCTCTATTGAAGATTG+AGG - chr7_2:84078429-84078448 Msa1083740:CDS 30.0%
AACACCAAACTGAAATTTGT+TGG + chr7_2:84078580-84078599 None:intergenic 30.0%
AAATGACCTTCAAAACTTCA+TGG + chr7_2:84078610-84078629 None:intergenic 30.0%
TGCACAAGATAATTGGAATT+TGG + chr7_2:84078851-84078870 None:intergenic 30.0%
ACAAACTTGCACAAGATAAT+TGG + chr7_2:84078858-84078877 None:intergenic 30.0%
CTTTCATGTCTCTTAGAATT+TGG - chr7_2:84079154-84079173 Msa1083740:intron 30.0%
TTAACTCATCCTTACAAAAC+TGG - chr7_2:84079184-84079203 Msa1083740:intron 30.0%
!!! TTTTAAGCATTGGCTTTAAG+AGG + chr7_2:84079413-84079432 None:intergenic 30.0%
! CAGGTTTTCATTTTAAGCAT+TGG + chr7_2:84079423-84079442 None:intergenic 30.0%
!! GAAGATAGGACTTGTTAATT+TGG - chr7_2:84079470-84079489 Msa1083740:intron 30.0%
!! GACTTGTTAATTTGGAGATA+CGG - chr7_2:84079478-84079497 Msa1083740:intron 30.0%
TACAGAAGATGAAAGAACAA+AGG + chr7_2:84079564-84079583 None:intergenic 30.0%
GAAATATACAAGAACGCTTT+GGG + chr7_2:84079730-84079749 None:intergenic 30.0%
TGAAATATACAAGAACGCTT+TGG + chr7_2:84079731-84079750 None:intergenic 30.0%
AAACAGAATTGTTTCAGTGA+GGG - chr7_2:84079794-84079813 Msa1083740:intron 30.0%
AGGAAATCTATAAGTAGCAA+TGG - chr7_2:84079823-84079842 Msa1083740:intron 30.0%
!! AATACTTGTTATCTGTACCA+CGG + chr7_2:84080489-84080508 None:intergenic 30.0%
TAACTGTAGACAAGAAATGT+TGG - chr7_2:84080558-84080577 Msa1083740:intron 30.0%
! CTGTATTTTATTGTTCTGTG+TGG - chr7_2:84080776-84080795 Msa1083740:CDS 30.0%
! GAAGTGAACTTAACTTTTGA+TGG - chr7_2:84080944-84080963 Msa1083740:CDS 30.0%
TGCAATGCAACAATATAGAA+AGG + chr7_2:84081023-84081042 None:intergenic 30.0%
TTCTATATTGTTGCATTGCA+TGG - chr7_2:84081023-84081042 Msa1083740:CDS 30.0%
TAACACTGGTCCTAAAAAAT+TGG + chr7_2:84081081-84081100 None:intergenic 30.0%
!!! AATTTTTTAGGACCAGTGTT+AGG - chr7_2:84081080-84081099 Msa1083740:CDS 30.0%
! AGAAGATGATAATGAGAGTG+AGG + chr7_2:84074917-84074936 None:intergenic 35.0%
GAGAAGTTGTTGTGATTAAG+AGG + chr7_2:84074965-84074984 None:intergenic 35.0%
TAGTTGTGACGATTGAGAAA+TGG + chr7_2:84075157-84075176 None:intergenic 35.0%
! GCGTTCTATCTTTTCTTTGT+TGG - chr7_2:84075497-84075516 Msa1083740:three_prime_UTR 35.0%
! GTTTTACATGGATTTGGGAA+TGG - chr7_2:84075526-84075545 Msa1083740:three_prime_UTR 35.0%
GAAAAAGATAAACACGCTTC+TGG - chr7_2:84075629-84075648 Msa1083740:three_prime_UTR 35.0%
!! ATTTCGTGGATCTTTTGGTT+CGG - chr7_2:84075652-84075671 Msa1083740:three_prime_UTR 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr7_2:84075771-84075790 Msa1083740:intron 35.0%
!!! TTTTTTCTTTGGTAGTGGCT+GGG + chr7_2:84075806-84075825 None:intergenic 35.0%
!!! ATTTTTTCTTTGGTAGTGGC+TGG + chr7_2:84075807-84075826 None:intergenic 35.0%
!! AGGTTTGTTAAACACTTGCA+CGG - chr7_2:84076025-84076044 Msa1083740:intron 35.0%
ACATCAAATGAATAGCTCCA+AGG + chr7_2:84076241-84076260 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr7_2:84076394-84076413 Msa1083740:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr7_2:84076399-84076418 Msa1083740:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7_2:84076455-84076474 Msa1083740:intron 35.0%
! GTTTCTCGAATGGTTTTCTT+AGG + chr7_2:84076510-84076529 None:intergenic 35.0%
GGTATATGTTTCTCAAGTTC+TGG - chr7_2:84076698-84076717 Msa1083740:intron 35.0%
GATTTAATGTCTACCGACAA+AGG + chr7_2:84076855-84076874 None:intergenic 35.0%
TGTCGGTAGACATTAAATCA+AGG - chr7_2:84076856-84076875 Msa1083740:intron 35.0%
TGATCATAGTAGCATCAACT+AGG + chr7_2:84076955-84076974 None:intergenic 35.0%
GAAATCTGTAAGCAGAGTAT+GGG + chr7_2:84077222-84077241 None:intergenic 35.0%
AGGGATTGTCAATCTTAAGA+GGG + chr7_2:84077271-84077290 None:intergenic 35.0%
TAAAATCTGTTCCATTGCGA+TGG + chr7_2:84077303-84077322 None:intergenic 35.0%
TGAGTTACATGCATACAAGA+GGG + chr7_2:84077358-84077377 None:intergenic 35.0%
ATGAGTTACATGCATACAAG+AGG + chr7_2:84077359-84077378 None:intergenic 35.0%
!! ACAGAGGGAAAAGAGTATTA+GGG + chr7_2:84077416-84077435 None:intergenic 35.0%
CCAACAAGCATGTTAAACAT+TGG + chr7_2:84077747-84077766 None:intergenic 35.0%
CCAATGTTTAACATGCTTGT+TGG - chr7_2:84077744-84077763 Msa1083740:intron 35.0%
! TTTAACATGCTTGTTGGTCT+TGG - chr7_2:84077750-84077769 Msa1083740:intron 35.0%
!!! TTTTTTGCACAAAACGGAAC+GGG + chr7_2:84078127-84078146 None:intergenic 35.0%
AAAATCCAGTTCTTGATACC+TGG - chr7_2:84078143-84078162 Msa1083740:three_prime_UTR 35.0%
GAGATTGGGTTTCAAATTAG+GGG + chr7_2:84078238-84078257 None:intergenic 35.0%
CAACGAGATATCAAAGAGAT+TGG + chr7_2:84078253-84078272 None:intergenic 35.0%
TTCAAGAGAAGAAAGCTTCA+AGG + chr7_2:84078532-84078551 None:intergenic 35.0%
ATGATTCTCTCTATGCTTTC+TGG - chr7_2:84078714-84078733 Msa1083740:CDS 35.0%
TGATTCTCTCTATGCTTTCT+GGG - chr7_2:84078715-84078734 Msa1083740:CDS 35.0%
! TGGGTTTTCTTGCACAAATT+TGG - chr7_2:84078734-84078753 Msa1083740:CDS 35.0%
!! TTTTGGTGGTATTAAGCTTG+TGG - chr7_2:84078793-84078812 Msa1083740:CDS 35.0%
!! AGTTTTATGCTGAATCTGCT+TGG - chr7_2:84078891-84078910 Msa1083740:CDS 35.0%
ATGTCTCTTAGAATTTGGGT+TGG - chr7_2:84079159-84079178 Msa1083740:intron 35.0%
!! CCTTAAATGCCAGTTTTGTA+AGG + chr7_2:84079196-84079215 None:intergenic 35.0%
CCTTACAAAACTGGCATTTA+AGG - chr7_2:84079193-84079212 Msa1083740:intron 35.0%
! AAAACTGGCATTTAAGGTGT+GGG - chr7_2:84079199-84079218 Msa1083740:intron 35.0%
TTTCATTGTGTAGGTGTGAA+GGG + chr7_2:84079288-84079307 None:intergenic 35.0%
! TTTAAGAGGAAGCGTGTTAA+TGG + chr7_2:84079399-84079418 None:intergenic 35.0%
TAATCATCATCTCACTCTTC+AGG + chr7_2:84079442-84079461 None:intergenic 35.0%
!!! AAGGGGCTATTTTGATAACA+TGG - chr7_2:84079527-84079546 Msa1083740:intron 35.0%
!!! AGGGGCTATTTTGATAACAT+GGG - chr7_2:84079528-84079547 Msa1083740:intron 35.0%
ATCACCGAAGAAAAATGAGA+AGG + chr7_2:84079621-84079640 None:intergenic 35.0%
GAAACAGAATTGTTTCAGTG+AGG - chr7_2:84079793-84079812 Msa1083740:intron 35.0%
TTGTGGCTGTAACAATAGTT+TGG - chr7_2:84079861-84079880 Msa1083740:intron 35.0%
TAAATAACAGGTATGTGGCA+AGG + chr7_2:84079908-84079927 None:intergenic 35.0%
ACAAGAAACGGCTAAATCAT+AGG + chr7_2:84079951-84079970 None:intergenic 35.0%
!!! CTTTTTTCCATTTGATGCTC+TGG + chr7_2:84080034-84080053 None:intergenic 35.0%
! CTTTCCATAACGATTTTCCT+AGG - chr7_2:84080535-84080554 Msa1083740:intron 35.0%
GTTACCTAGGAAAATCGTTA+TGG + chr7_2:84080542-84080561 None:intergenic 35.0%
TTTCTTGTCTACAGTTACCT+AGG + chr7_2:84080555-84080574 None:intergenic 35.0%
! AAAAGCATGAGGAATAGCAA+TGG - chr7_2:84080590-84080609 Msa1083740:intron 35.0%
GTCAAATACGCATAAACTTG+TGG + chr7_2:84080625-84080644 None:intergenic 35.0%
TGTACTTGCAACAAATTTCC+AGG + chr7_2:84080649-84080668 None:intergenic 35.0%
!! AATTTGTTGCAAGTACATCC+CGG - chr7_2:84080652-84080671 Msa1083740:CDS 35.0%
CCATTACATCATTTGACTAG+TGG + chr7_2:84080703-84080722 None:intergenic 35.0%
CCACTAGTCAAATGATGTAA+TGG - chr7_2:84080700-84080719 Msa1083740:CDS 35.0%
GGAATTACAAAAGCTGAAGT+GGG - chr7_2:84080853-84080872 Msa1083740:CDS 35.0%
GAATTACAAAAGCTGAAGTG+GGG - chr7_2:84080854-84080873 Msa1083740:CDS 35.0%
AATTACAAAAGCTGAAGTGG+GGG - chr7_2:84080855-84080874 Msa1083740:CDS 35.0%
GGATTATTTCCTCACTTCTT+GGG - chr7_2:84080876-84080895 Msa1083740:CDS 35.0%
TACTTTGACTGCACAAAACT+TGG - chr7_2:84080988-84081007 Msa1083740:CDS 35.0%
! ATGGTTAAGAAGCAGTTTTC+CGG - chr7_2:84081042-84081061 Msa1083740:CDS 35.0%
! TGTTTTGCCAACAATCCATT+TGG + chr7_2:84081118-84081137 None:intergenic 35.0%
GCTAGAAGGTTAATACTAGA+AGG - chr7_2:84081156-84081175 Msa1083740:CDS 35.0%
AGGAATAAGAAAGAACTGAG+TGG - chr7_2:84081176-84081195 Msa1083740:CDS 35.0%
GGAATAAGAAAGAACTGAGT+GGG - chr7_2:84081177-84081196 Msa1083740:CDS 35.0%
GAATAAGAAAGAACTGAGTG+GGG - chr7_2:84081178-84081197 Msa1083740:CDS 35.0%
! GAGGATTAGTGAGAGTGAAA+TGG + chr7_2:84074898-84074917 None:intergenic 40.0%
GTTGTTGTGATTAAGAGGGA+TGG + chr7_2:84074960-84074979 None:intergenic 40.0%
TGATGAGGATGTAGAAATGG+AGG + chr7_2:84075121-84075140 None:intergenic 40.0%
GATTGAGAAATGGTGAGAAG+CGG + chr7_2:84075147-84075166 None:intergenic 40.0%
! ATTTTTCTATGGCAAGCCGT+TGG - chr7_2:84075467-84075486 Msa1083740:three_prime_UTR 40.0%
ATAGAACGCAACGAATCCAA+CGG + chr7_2:84075486-84075505 None:intergenic 40.0%
!! TATTACGACGAAAAAGCGTC+CGG - chr7_2:84075599-84075618 Msa1083740:three_prime_UTR 40.0%
! TCTGGATTTCGTGGATCTTT+TGG - chr7_2:84075647-84075666 Msa1083740:three_prime_UTR 40.0%
! TGAAAGCACACGTATACGAA+AGG + chr7_2:84075717-84075736 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr7_2:84075772-84075791 Msa1083740:intron 40.0%
!!! TTTTTCTTTGGTAGTGGCTG+GGG + chr7_2:84075805-84075824 None:intergenic 40.0%
!! GGTTTGTTAAACACTTGCAC+GGG - chr7_2:84076026-84076045 Msa1083740:intron 40.0%
TAACCTTGAAACAATGGCCT+TGG - chr7_2:84076221-84076240 Msa1083740:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr7_2:84076442-84076461 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr7_2:84076480-84076499 Msa1083740:intron 40.0%
!! ATGTTTCTCAAGTTCTGGAC+AGG - chr7_2:84076703-84076722 Msa1083740:intron 40.0%
TTTCACACATAATATGGGGG+AGG - chr7_2:84076815-84076834 Msa1083740:intron 40.0%
GACATTAAATCAAGGACAGC+TGG - chr7_2:84076864-84076883 Msa1083740:intron 40.0%
GAAATGTTATGCATCGTGTG+TGG - chr7_2:84077133-84077152 Msa1083740:intron 40.0%
GGAAATCTGTAAGCAGAGTA+TGG + chr7_2:84077223-84077242 None:intergenic 40.0%
ACTCTGCTTACAGATTTCCA+AGG - chr7_2:84077224-84077243 Msa1083740:intron 40.0%
CTTACAGATTTCCAAGGCAT+GGG - chr7_2:84077230-84077249 Msa1083740:intron 40.0%
AATCTTAAGAGGGTTGAGAC+AGG + chr7_2:84077261-84077280 None:intergenic 40.0%
GAGGGATTGTCAATCTTAAG+AGG + chr7_2:84077272-84077291 None:intergenic 40.0%
! TAGTGGACAAAGAGCGATAT+TGG + chr7_2:84077334-84077353 None:intergenic 40.0%
TTAGGGAGGAGGAAAACTAT+GGG + chr7_2:84077399-84077418 None:intergenic 40.0%
ATTAGGGAGGAGGAAAACTA+TGG + chr7_2:84077400-84077419 None:intergenic 40.0%
!! CACAGAGGGAAAAGAGTATT+AGG + chr7_2:84077417-84077436 None:intergenic 40.0%
! CTAATACTCTTTTCCCTCTG+TGG - chr7_2:84077415-84077434 Msa1083740:intron 40.0%
GAAGCTTGTCATGAACACTA+CGG + chr7_2:84077442-84077461 None:intergenic 40.0%
CCAAAACACACTCATAACGA+AGG + chr7_2:84077538-84077557 None:intergenic 40.0%
! CCTTCGTTATGAGTGTGTTT+TGG - chr7_2:84077535-84077554 Msa1083740:intron 40.0%
! TTTTGGATATCTACCACAGC+TGG - chr7_2:84077552-84077571 Msa1083740:intron 40.0%
GTGAATTGCCTTGAAGCTTT+AGG - chr7_2:84077582-84077601 Msa1083740:intron 40.0%
ATGCAATCACTATACCAACG+TGG + chr7_2:84077833-84077852 None:intergenic 40.0%
!! TTCCTGCTTTTAAGCCTCAT+GGG - chr7_2:84077858-84077877 Msa1083740:three_prime_UTR 40.0%
GGTCTCTCTTAGTAATCACT+TGG - chr7_2:84077880-84077899 Msa1083740:three_prime_UTR 40.0%
AGAAACCAGGTATCAAGAAC+TGG + chr7_2:84078151-84078170 None:intergenic 40.0%
!! TAGTTAGGGTTTTTCAGCTG+TGG + chr7_2:84078207-84078226 None:intergenic 40.0%
GGTTTCAAATTAGGGGATAG+GGG + chr7_2:84078231-84078250 None:intergenic 40.0%
GGGTTTCAAATTAGGGGATA+GGG + chr7_2:84078232-84078251 None:intergenic 40.0%
TGGGTTTCAAATTAGGGGAT+AGG + chr7_2:84078233-84078252 None:intergenic 40.0%
AGCTTTCTTCTCTTGAAGCT+CGG - chr7_2:84078535-84078554 Msa1083740:CDS 40.0%
!! CACTCTCCATGAAGTTTTGA+AGG - chr7_2:84078601-84078620 Msa1083740:CDS 40.0%
!! TTTTGAAGGTCATTTCCTGC+AGG - chr7_2:84078615-84078634 Msa1083740:CDS 40.0%
!! GCTATGGTGCTAATGAGTTT+TGG - chr7_2:84078776-84078795 Msa1083740:CDS 40.0%
!! ATGGTGCTAATGAGTTTTGG+TGG - chr7_2:84078779-84078798 Msa1083740:CDS 40.0%
CAGAGTCATGCATATGCATA+TGG - chr7_2:84078919-84078938 Msa1083740:CDS 40.0%
AGTCATGCATATGCATATGG+TGG - chr7_2:84078922-84078941 Msa1083740:CDS 40.0%
GTCATGCATATGCATATGGT+GGG - chr7_2:84078923-84078942 Msa1083740:CDS 40.0%
ACATCAGGACATTGGCATTT+AGG - chr7_2:84079014-84079033 Msa1083740:intron 40.0%
GGACATTGGCATTTAGGAAA+TGG - chr7_2:84079020-84079039 Msa1083740:intron 40.0%
! CAAAACTGGCATTTAAGGTG+TGG - chr7_2:84079198-84079217 Msa1083740:intron 40.0%
ATTTAGTCCCACATTGCCTA+GGG + chr7_2:84079260-84079279 None:intergenic 40.0%
TTCATTGTGTAGGTGTGAAG+GGG + chr7_2:84079287-84079306 None:intergenic 40.0%
CTTTCATTGTGTAGGTGTGA+AGG + chr7_2:84079289-84079308 None:intergenic 40.0%
! CACCTACACAATGAAAGTGT+TGG - chr7_2:84079292-84079311 Msa1083740:intron 40.0%
CTCCAACACTTTCATTGTGT+AGG + chr7_2:84079297-84079316 None:intergenic 40.0%
!! CTACACAATGAAAGTGTTGG+AGG - chr7_2:84079295-84079314 Msa1083740:intron 40.0%
GCTGCATAATTACGGCATTT+GGG + chr7_2:84079336-84079355 None:intergenic 40.0%
AGCTGCATAATTACGGCATT+TGG + chr7_2:84079337-84079356 None:intergenic 40.0%
TGCCTCTAGCTGCATAATTA+CGG + chr7_2:84079344-84079363 None:intergenic 40.0%
! GCGTGTTAATGGACATTGTT+GGG + chr7_2:84079388-84079407 None:intergenic 40.0%
! AGCGTGTTAATGGACATTGT+TGG + chr7_2:84079389-84079408 None:intergenic 40.0%
!! GTCGCCTTCTCATTTTTCTT+CGG - chr7_2:84079614-84079633 Msa1083740:intron 40.0%
CTGTTCAGACAGAAGGTTAT+TGG - chr7_2:84079662-84079681 Msa1083740:intron 40.0%
!! CCATTTTTGACAAAGTGACC+CGG - chr7_2:84079751-84079770 Msa1083740:intron 40.0%
TATAACTCTTCCATGATGCC+GGG + chr7_2:84079772-84079791 None:intergenic 40.0%
CTATAACTCTTCCATGATGC+CGG + chr7_2:84079773-84079792 None:intergenic 40.0%
!! GTAGCAATGGCTTTAAGACA+CGG - chr7_2:84079836-84079855 Msa1083740:intron 40.0%
GATTGCAATACCTGTCACAT+TGG + chr7_2:84079998-84080017 None:intergenic 40.0%
! CTTACTACCAGAGCATCAAA+TGG - chr7_2:84080024-84080043 Msa1083740:intron 40.0%
TTCAATTCAAGAAGGCCTGT+CGG - chr7_2:84080068-84080087 Msa1083740:intron 40.0%
AAAATAGGTCAACCAACACC+AGG + chr7_2:84080222-84080241 None:intergenic 40.0%
!!! CTTTTTCAGCGCTCTTTGAA+TGG - chr7_2:84080461-84080480 Msa1083740:intron 40.0%
! GGAACTATGTGAAAAGCATG+AGG - chr7_2:84080579-84080598 Msa1083740:intron 40.0%
TGAGGAATAGCAATGGAAAG+TGG - chr7_2:84080597-84080616 Msa1083740:intron 40.0%
GTTTATGCGTATTTGACACC+TGG - chr7_2:84080628-84080647 Msa1083740:CDS 40.0%
TGGAAACAACCAACAAGAAC+AGG + chr7_2:84080683-84080702 None:intergenic 40.0%
!! CGACATTAGCTAAGAGCATT+TGG - chr7_2:84080753-84080772 Msa1083740:CDS 40.0%
!!! TCTTTGTCACTTTTACACGG+TGG - chr7_2:84080828-84080847 Msa1083740:CDS 40.0%
CGGAATTACAAAAGCTGAAG+TGG - chr7_2:84080852-84080871 Msa1083740:CDS 40.0%
GGGATTATTTCCTCACTTCT+TGG - chr7_2:84080875-84080894 Msa1083740:CDS 40.0%
ATAATTGCTCCCAAGAAGTG+AGG + chr7_2:84080888-84080907 None:intergenic 40.0%
! TGGTTAAGAAGCAGTTTTCC+GGG - chr7_2:84081043-84081062 Msa1083740:CDS 40.0%
!! GAGAGGAGAGAGTATTATCA+AGG - chr7_2:84081271-84081290 Msa1083740:CDS 40.0%
GTGATTAAGAGGGATGGAGA+GGG + chr7_2:84074954-84074973 None:intergenic 45.0%
TGTGATTAAGAGGGATGGAG+AGG + chr7_2:84074955-84074974 None:intergenic 45.0%
TTGAGGAGTGATCTACGAAG+AGG + chr7_2:84074987-84075006 None:intergenic 45.0%
TGGATTGAATGGGGCAAGAT+GGG + chr7_2:84075019-84075038 None:intergenic 45.0%
TTGGATTGAATGGGGCAAGA+TGG + chr7_2:84075020-84075039 None:intergenic 45.0%
TCTTGCCCCATTCAATCCAA+TGG - chr7_2:84075020-84075039 Msa1083740:three_prime_UTR 45.0%
ATGCCGCCATTGGATTGAAT+GGG + chr7_2:84075029-84075048 None:intergenic 45.0%
GGAAAATGCAGTGGTAGTTG+AGG + chr7_2:84075052-84075071 None:intergenic 45.0%
GAGTTTGAGGGAAAATGCAG+TGG + chr7_2:84075061-84075080 None:intergenic 45.0%
TTGAGAGGATGGGAGTTTGA+GGG + chr7_2:84075073-84075092 None:intergenic 45.0%
ATTGAGAGGATGGGAGTTTG+AGG + chr7_2:84075074-84075093 None:intergenic 45.0%
GAAATGGAGGATGAGGAGAA+TGG + chr7_2:84075108-84075127 None:intergenic 45.0%
GGATGTAGAAATGGAGGATG+AGG + chr7_2:84075115-84075134 None:intergenic 45.0%
CCATACTAGGAGAGAGATTG+AGG + chr7_2:84075193-84075212 None:intergenic 45.0%
CCTCAATCTCTCTCCTAGTA+TGG - chr7_2:84075190-84075209 Msa1083740:three_prime_UTR 45.0%
! TTCGTCTCTGCTCTTGTTGT+CGG - chr7_2:84075329-84075348 Msa1083740:three_prime_UTR 45.0%
TGGATTTGGGAATGGCCAAT+CGG - chr7_2:84075534-84075553 Msa1083740:three_prime_UTR 45.0%
! AGAACTCTTTTCCCTCCGAT+TGG + chr7_2:84075552-84075571 None:intergenic 45.0%
AAAGAGTTCTGCGGATCTTG+AGG - chr7_2:84075562-84075581 Msa1083740:three_prime_UTR 45.0%
AAGAGTTCTGCGGATCTTGA+GGG - chr7_2:84075563-84075582 Msa1083740:three_prime_UTR 45.0%
!!! GGACGCTTTTTCGTCGTAAT+AGG + chr7_2:84075600-84075619 None:intergenic 45.0%
AAACACGCTTCTGGATTTCG+TGG - chr7_2:84075638-84075657 Msa1083740:three_prime_UTR 45.0%
! GATCTAAAACCAAACGCTGC+AGG - chr7_2:84076187-84076206 Msa1083740:three_prime_UTR 45.0%
TATGGTTAACCTGCAGCGTT+TGG + chr7_2:84076199-84076218 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr7_2:84076441-84076460 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr7_2:84076464-84076483 Msa1083740:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr7_2:84076474-84076493 Msa1083740:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_2:84076620-84076639 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_2:84076621-84076640 None:intergenic 45.0%
TAGCCAGTTGATCCCTTTGT+CGG - chr7_2:84076839-84076858 Msa1083740:intron 45.0%
GGTCAGTGGTCAACGTAATT+TGG + chr7_2:84076934-84076953 None:intergenic 45.0%
AGTAGCATCAACTAGGTCAG+TGG + chr7_2:84076948-84076967 None:intergenic 45.0%
GCTTACAGATTTCCAAGGCA+TGG - chr7_2:84077229-84077248 Msa1083740:intron 45.0%
!! GGAAAAGAGTATTAGGGAGG+AGG + chr7_2:84077410-84077429 None:intergenic 45.0%
!! GAGGGAAAAGAGTATTAGGG+AGG + chr7_2:84077413-84077432 None:intergenic 45.0%
!! AGGCAAATGCTCTGCTTTTG+GGG + chr7_2:84077502-84077521 None:intergenic 45.0%
!! CAGGCAAATGCTCTGCTTTT+GGG + chr7_2:84077503-84077522 None:intergenic 45.0%
! ACAGGCAAATGCTCTGCTTT+TGG + chr7_2:84077504-84077523 None:intergenic 45.0%
! AAAAGCAGAGCATTTGCCTG+TGG - chr7_2:84077503-84077522 Msa1083740:intron 45.0%
TGAATTTCCCCATGCTAGCA+CGG + chr7_2:84077646-84077665 None:intergenic 45.0%
CTAGCATGGGGAAATTCAGT+GGG - chr7_2:84077648-84077667 Msa1083740:three_prime_UTR 45.0%
TAGCATGGGGAAATTCAGTG+GGG - chr7_2:84077649-84077668 Msa1083740:three_prime_UTR 45.0%
GATGTTGCAGTTGCTAAAGC+TGG - chr7_2:84077684-84077703 Msa1083740:intron 45.0%
AGTTGCTAAAGCTGGTCATC+CGG - chr7_2:84077692-84077711 Msa1083740:intron 45.0%
!! TGTTGGTCTTGGAACTGCTT+TGG - chr7_2:84077761-84077780 Msa1083740:intron 45.0%
!! GTTCCTGCTTTTAAGCCTCA+TGG - chr7_2:84077857-84077876 Msa1083740:three_prime_UTR 45.0%
!! TCCTGCTTTTAAGCCTCATG+GGG - chr7_2:84077859-84077878 Msa1083740:three_prime_UTR 45.0%
TTACTAAGAGAGACCCCATG+AGG + chr7_2:84077875-84077894 None:intergenic 45.0%
AAAACCTAGGCACTCGGAAT+CGG + chr7_2:84077908-84077927 None:intergenic 45.0%
! ATTCCGAGTGCCTAGGTTTT+GGG - chr7_2:84077908-84077927 Msa1083740:three_prime_UTR 45.0%
AGACAGAATCCCCAAAACCT+AGG + chr7_2:84077921-84077940 None:intergenic 45.0%
!! TTTTGGGGATTCTGTCTCGT+AGG - chr7_2:84077924-84077943 Msa1083740:three_prime_UTR 45.0%
!! TAGGGGATAGGGGTTAGTTA+GGG + chr7_2:84078221-84078240 None:intergenic 45.0%
!! TTAGGGGATAGGGGTTAGTT+AGG + chr7_2:84078222-84078241 None:intergenic 45.0%
! TCACGCACTCTCTGATTTGT+TGG - chr7_2:84078643-84078662 Msa1083740:CDS 45.0%
TGGTGGTATTAAGCTTGTGG+TGG - chr7_2:84078796-84078815 Msa1083740:CDS 45.0%
GGTGGTATTAAGCTTGTGGT+GGG - chr7_2:84078797-84078816 Msa1083740:CDS 45.0%
GTGGTATTAAGCTTGTGGTG+GGG - chr7_2:84078798-84078817 Msa1083740:CDS 45.0%
! TGAGTTGAGTAGCAGACATC+AGG - chr7_2:84078999-84079018 Msa1083740:intron 45.0%
AGTAGCAGACATCAGGACAT+TGG - chr7_2:84079006-84079025 Msa1083740:intron 45.0%
ACTACACATGCCATATCCCT+AGG - chr7_2:84079241-84079260 Msa1083740:intron 45.0%
GATTTAGTCCCACATTGCCT+AGG + chr7_2:84079261-84079280 None:intergenic 45.0%
TGCCGTAATTATGCAGCTAG+AGG - chr7_2:84079339-84079358 Msa1083740:intron 45.0%
TTTCTTCGGTGATGTCTGCA+TGG - chr7_2:84079628-84079647 Msa1083740:intron 45.0%
TTCTTCGGTGATGTCTGCAT+GGG - chr7_2:84079629-84079648 Msa1083740:intron 45.0%
TGTGAGTCTGTTCAGACAGA+AGG - chr7_2:84079655-84079674 Msa1083740:intron 45.0%
! CCGGGTCACTTTGTCAAAAA+TGG + chr7_2:84079754-84079773 None:intergenic 45.0%
CGGCATCATGGAAGAGTTAT+AGG - chr7_2:84079771-84079790 Msa1083740:intron 45.0%
TGTTTCAGTGAGGGTTGTGA+AGG - chr7_2:84079803-84079822 Msa1083740:intron 45.0%
!! GGCTTTAAGACACGGTATTG+TGG - chr7_2:84079844-84079863 Msa1083740:intron 45.0%
TCCTTGTTCTCCAATGTGAC+AGG - chr7_2:84079985-84080004 Msa1083740:intron 45.0%
ACCTGTCACATTGGAGAACA+AGG + chr7_2:84079989-84080008 None:intergenic 45.0%
TCAATTCAAGAAGGCCTGTC+GGG - chr7_2:84080069-84080088 Msa1083740:intron 45.0%
GAGCAGTGCAGGTATAACTT+TGG - chr7_2:84080121-84080140 Msa1083740:intron 45.0%
TGCTCTTAGCTAATGTCGTG+TGG + chr7_2:84080751-84080770 None:intergenic 45.0%
!!! TGTCACTTTTACACGGTGGT+CGG - chr7_2:84080832-84080851 Msa1083740:CDS 45.0%
CTCTCAAGCTTAGTGCTAGA+AGG - chr7_2:84081142-84081161 Msa1083740:CDS 45.0%
ATTAAGAGGGATGGAGAGGG+AGG + chr7_2:84074951-84074970 None:intergenic 50.0%
AAGATGGGGCGATGTTGTTG+AGG + chr7_2:84075004-84075023 None:intergenic 50.0%
GGATTGAATGGGGCAAGATG+GGG + chr7_2:84075018-84075037 None:intergenic 50.0%
TGCCCCATTCAATCCAATGG+CGG - chr7_2:84075023-84075042 Msa1083740:three_prime_UTR 50.0%
TGCCGCCATTGGATTGAATG+GGG + chr7_2:84075028-84075047 None:intergenic 50.0%
GATGCCGCCATTGGATTGAA+TGG + chr7_2:84075030-84075049 None:intergenic 50.0%
ATGAGGAGAATGGAGAGGGA+GGG + chr7_2:84075098-84075117 None:intergenic 50.0%
GAGGATGAGGAGAATGGAGA+GGG + chr7_2:84075102-84075121 None:intergenic 50.0%
!! GGTGAGAAGCGGTTTTGATG+AGG + chr7_2:84075136-84075155 None:intergenic 50.0%
ACACTTCTCGCTCTCGGTAA+CGG - chr7_2:84075221-84075240 Msa1083740:three_prime_UTR 50.0%
! AAGAGCAGAGACGAAAGCAC+CGG + chr7_2:84075324-84075343 None:intergenic 50.0%
! TGCTCCTTTTCCCGTTGATC+CGG - chr7_2:84075370-84075389 Msa1083740:three_prime_UTR 50.0%
ACATCTCTAACAAACGGCGC+CGG + chr7_2:84075392-84075411 None:intergenic 50.0%
ATTTGGGAATGGCCAATCGG+AGG - chr7_2:84075537-84075556 Msa1083740:three_prime_UTR 50.0%
TTTGGGAATGGCCAATCGGA+GGG - chr7_2:84075538-84075557 Msa1083740:three_prime_UTR 50.0%
TCGGAGGGAAAAGAGTTCTG+CGG - chr7_2:84075553-84075572 Msa1083740:three_prime_UTR 50.0%
CAACCAACTGAGCTAAGCTC+AGG + chr7_2:84075746-84075765 None:intergenic 50.0%
CTGAGCTTAGCTCAGTTGGT+TGG - chr7_2:84075744-84075763 Msa1083740:intron 50.0%
GCTCCAAGGCCATTGTTTCA+AGG + chr7_2:84076227-84076246 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_2:84076616-84076635 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_2:84076622-84076641 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_2:84076619-84076638 Msa1083740:intron 50.0%
CTACCGACAAAGGGATCAAC+TGG + chr7_2:84076845-84076864 None:intergenic 50.0%
AGCAGAGTATGGGATACGTC+AGG + chr7_2:84077212-84077231 None:intergenic 50.0%
!! ATTGCGATGGTGCTGGTTGA+GGG + chr7_2:84077290-84077309 None:intergenic 50.0%
CATGCATACAAGAGGGCTAG+TGG + chr7_2:84077351-84077370 None:intergenic 50.0%
TGAACACTACGGACCACAGA+GGG + chr7_2:84077431-84077450 None:intergenic 50.0%
ATGAACACTACGGACCACAG+AGG + chr7_2:84077432-84077451 None:intergenic 50.0%
!! GGCAAATGCTCTGCTTTTGG+GGG + chr7_2:84077501-84077520 None:intergenic 50.0%
GAAGCGTGCCTAAAGCTTCA+AGG + chr7_2:84077593-84077612 None:intergenic 50.0%
GTAAGACCTAGGAATGCCTG+CGG + chr7_2:84077624-84077643 None:intergenic 50.0%
ATGCTAGCACGGTAAGACCT+AGG + chr7_2:84077635-84077654 None:intergenic 50.0%
TAGGTCTTACCGTGCTAGCA+TGG - chr7_2:84077634-84077653 Msa1083740:three_prime_UTR 50.0%
AGGTCTTACCGTGCTAGCAT+GGG - chr7_2:84077635-84077654 Msa1083740:three_prime_UTR 50.0%
GCTAGCATGGGGAAATTCAG+TGG - chr7_2:84077647-84077666 Msa1083740:three_prime_UTR 50.0%
AGCATGGGGAAATTCAGTGG+GGG - chr7_2:84077650-84077669 Msa1083740:three_prime_UTR 50.0%
TAAAGCTGGTCATCCGGCAA+TGG - chr7_2:84077698-84077717 Msa1083740:intron 50.0%
! CATTGGTCCAGCAAAGCATC+CGG + chr7_2:84077730-84077749 None:intergenic 50.0%
ACCCCATGAGGCTTAAAAGC+AGG + chr7_2:84077863-84077882 None:intergenic 50.0%
AAACCTAGGCACTCGGAATC+GGG + chr7_2:84077907-84077926 None:intergenic 50.0%
! GATTCCGAGTGCCTAGGTTT+TGG - chr7_2:84077907-84077926 Msa1083740:three_prime_UTR 50.0%
! TTCCGAGTGCCTAGGTTTTG+GGG - chr7_2:84077909-84077928 Msa1083740:three_prime_UTR 50.0%
ATCCCCAAAACCTAGGCACT+CGG + chr7_2:84077914-84077933 None:intergenic 50.0%
! TGAGTTGAGTGTGAGAGACG+AGG + chr7_2:84078174-84078193 None:intergenic 50.0%
TGCCATATCCCTAGGCAATG+TGG - chr7_2:84079249-84079268 Msa1083740:intron 50.0%
GCCATATCCCTAGGCAATGT+GGG - chr7_2:84079250-84079269 Msa1083740:intron 50.0%
TCCCACATTGCCTAGGGATA+TGG + chr7_2:84079254-84079273 None:intergenic 50.0%
TTGTGTAGGTGTGAAGGGGA+TGG + chr7_2:84079283-84079302 None:intergenic 50.0%
! AGTGTTGGAGGCTGCAATGA+TGG - chr7_2:84079307-84079326 Msa1083740:intron 50.0%
TGGGAATTCTGCCTTCACTG+TGG + chr7_2:84079369-84079388 None:intergenic 50.0%
TCAATGACGAAGAGCAGTGC+AGG - chr7_2:84080110-84080129 Msa1083740:intron 50.0%
CACCAGGTGTAGCGTACATT+GGG + chr7_2:84080206-84080225 None:intergenic 50.0%
ACACCAGGTGTAGCGTACAT+TGG + chr7_2:84080207-84080226 None:intergenic 50.0%
ATGTACGCTACACCTGGTGT+TGG - chr7_2:84080207-84080226 Msa1083740:intron 50.0%
CAACAAGAACAGGTGCTTCC+GGG + chr7_2:84080673-84080692 None:intergenic 50.0%
CCAACAAGAACAGGTGCTTC+CGG + chr7_2:84080674-84080693 None:intergenic 50.0%
ACAATCCATTTGGCCCACCT+GGG + chr7_2:84081108-84081127 None:intergenic 50.0%
AACAATCCATTTGGCCCACC+TGG + chr7_2:84081109-84081128 None:intergenic 50.0%
!! AGGTGGGCCAAATGGATTGT+TGG - chr7_2:84081108-84081127 Msa1083740:CDS 50.0%
CTTTCTCTCCATCAGCCACT+TGG + chr7_2:84081208-84081227 None:intergenic 50.0%
GTAGTTGAGGATGCCGCCAT+TGG + chr7_2:84075039-84075058 None:intergenic 55.0%
AGGGAGGGGATTGAGAGGAT+GGG + chr7_2:84075083-84075102 None:intergenic 55.0%
TGAGGAGAATGGAGAGGGAG+GGG + chr7_2:84075097-84075116 None:intergenic 55.0%
GATGAGGAGAATGGAGAGGG+AGG + chr7_2:84075099-84075118 None:intergenic 55.0%
GGAGGATGAGGAGAATGGAG+AGG + chr7_2:84075103-84075122 None:intergenic 55.0%
! ACCGAGAGCGAGAAGTGTGA+CGG + chr7_2:84075219-84075238 None:intergenic 55.0%
GCGAGAGATGAGAAGACGTC+GGG + chr7_2:84075251-84075270 None:intergenic 55.0%
GGCGAGAGATGAGAAGACGT+CGG + chr7_2:84075252-84075271 None:intergenic 55.0%
!! GAAGCCGGTACGGTATTGAC+CGG + chr7_2:84075285-84075304 None:intergenic 55.0%
!! GGTCAATACCGTACCGGCTT+CGG - chr7_2:84075284-84075303 Msa1083740:three_prime_UTR 55.0%
! AACAAACGGCGCCGGATCAA+CGG + chr7_2:84075384-84075403 None:intergenic 55.0%
CCAACTGAGCTAAGCTCAGG+AGG + chr7_2:84075743-84075762 None:intergenic 55.0%
CCTCCTGAGCTTAGCTCAGT+TGG - chr7_2:84075740-84075759 Msa1083740:intron 55.0%
! AGTGGCTGGGGTTTGAAACC+CGG + chr7_2:84075793-84075812 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_2:84076608-84076627 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_2:84076607-84076626 Msa1083740:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_2:84076608-84076627 Msa1083740:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_2:84076614-84076633 Msa1083740:intron 55.0%
!! CATTGCGATGGTGCTGGTTG+AGG + chr7_2:84077291-84077310 None:intergenic 55.0%
CTCAACCAGCACCATCGCAA+TGG - chr7_2:84077289-84077308 Msa1083740:intron 55.0%
CTGTTCCATTGCGATGGTGC+TGG + chr7_2:84077297-84077316 None:intergenic 55.0%
! AGCAGAGCATTTGCCTGTGG+TGG - chr7_2:84077506-84077525 Msa1083740:intron 55.0%
GCATTTGCCTGTGGTGGTTG+TGG - chr7_2:84077512-84077531 Msa1083740:intron 55.0%
ATTCACGAGCTCTCCAGCTG+TGG + chr7_2:84077568-84077587 None:intergenic 55.0%
AAACTGCCGCAGGCATTCCT+AGG - chr7_2:84077615-84077634 Msa1083740:three_prime_UTR 55.0%
GGTCTTACCGTGCTAGCATG+GGG - chr7_2:84077636-84077655 Msa1083740:three_prime_UTR 55.0%
TGGTCATCCGGCAATGGCAA+TGG - chr7_2:84077704-84077723 Msa1083740:intron 55.0%
GTGAGAGACGAGGAGAAACC+AGG + chr7_2:84078164-84078183 None:intergenic 55.0%
GGGAGTCACGAGCAATGAGT+TGG + chr7_2:84078292-84078311 None:intergenic 55.0%
GAGTGCGTGAAAAGACCTGC+AGG + chr7_2:84078633-84078652 None:intergenic 55.0%
CTAGAGGCAGACCACAGTGA+AGG - chr7_2:84079355-84079374 Msa1083740:intron 55.0%
GACAAAGTGACCCGGCATCA+TGG - chr7_2:84079759-84079778 Msa1083740:intron 55.0%
! AGCTTGTTCTGTTGCCCGAC+AGG + chr7_2:84080086-84080105 None:intergenic 55.0%
CTCCCAATGTACGCTACACC+TGG - chr7_2:84080201-84080220 Msa1083740:intron 55.0%
GCGCTCTTTGAATGGAACCG+TGG - chr7_2:84080469-84080488 Msa1083740:intron 55.0%
!! CCGGAAGCACCTGTTCTTGT+TGG - chr7_2:84080671-84080690 Msa1083740:CDS 55.0%
AGGACCAGTGTTAGGAACCC+AGG - chr7_2:84081088-84081107 Msa1083740:CDS 55.0%
ACCAGTGTTAGGAACCCAGG+TGG - chr7_2:84081091-84081110 Msa1083740:CDS 55.0%
CCAGTGTTAGGAACCCAGGT+GGG - chr7_2:84081092-84081111 Msa1083740:CDS 55.0%
ACTGAGTGGGGTTGTCCAAG+TGG - chr7_2:84081190-84081209 Msa1083740:CDS 55.0%
!! TATGGGTGCTGACTGCTGAG+AGG - chr7_2:84081254-84081273 Msa1083740:CDS 55.0%
GAGGGAGGGGATTGAGAGGA+TGG + chr7_2:84075084-84075103 None:intergenic 60.0%
TGGAGAGGGAGGGGATTGAG+AGG + chr7_2:84075088-84075107 None:intergenic 60.0%
AGTGTGACGGCGGCCATACT+AGG + chr7_2:84075206-84075225 None:intergenic 60.0%
! GAGAGCGAGAAGTGTGACGG+CGG + chr7_2:84075216-84075235 None:intergenic 60.0%
GCCGTCACACTTCTCGCTCT+CGG - chr7_2:84075215-84075234 Msa1083740:three_prime_UTR 60.0%
! GTATTGACCGGCGCGAAGAG+CGG + chr7_2:84075273-84075292 None:intergenic 60.0%
! GTATAGCGCCGAAGCCGGTA+CGG + chr7_2:84075295-84075314 None:intergenic 60.0%
! GGAGAGTATAGCGCCGAAGC+CGG + chr7_2:84075300-84075319 None:intergenic 60.0%
TTCGGCGCTATACTCTCCGC+CGG - chr7_2:84075302-84075321 Msa1083740:three_prime_UTR 60.0%
!! AGCAGAGACGAAAGCACCGG+CGG + chr7_2:84075321-84075340 None:intergenic 60.0%
! ACAAACGGCGCCGGATCAAC+GGG + chr7_2:84075383-84075402 None:intergenic 60.0%
GACAGGAAGCTCCCATGCCT+TGG + chr7_2:84077244-84077263 None:intergenic 60.0%
ACGAAGGCCACAACCACCAC+AGG + chr7_2:84077522-84077541 None:intergenic 60.0%
CACGCTTCTCAAACTGCCGC+AGG - chr7_2:84077605-84077624 Msa1083740:three_prime_UTR 60.0%
CATCCGGCAATGGCAATGGC+CGG - chr7_2:84077708-84077727 Msa1083740:intron 60.0%
CATCCGGCCATTGCCATTGC+CGG + chr7_2:84077714-84077733 None:intergenic 60.0%
GCAATGGCCGGATGCTTTGC+TGG - chr7_2:84077720-84077739 Msa1083740:intron 60.0%
CCCACCTGGGTTCCTAACAC+TGG + chr7_2:84081095-84081114 None:intergenic 60.0%
AGGAACCCAGGTGGGCCAAA+TGG - chr7_2:84081100-84081119 Msa1083740:CDS 60.0%
GGGGTTGTCCAAGTGGCTGA+TGG - chr7_2:84081197-84081216 Msa1083740:CDS 60.0%
! CGCGCCGGTCAATACCGTAC+CGG - chr7_2:84075278-84075297 Msa1083740:three_prime_UTR 65.0%
! GGCGCCGGATCAACGGGAAA+AGG + chr7_2:84075377-84075396 None:intergenic 65.0%
GGTCCCGATTCCGAGTGCCT+AGG - chr7_2:84077901-84077920 Msa1083740:three_prime_UTR 65.0%
TCTCTCGCCGCTCTTCGCGC+CGG - chr7_2:84075263-84075282 Msa1083740:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84074882 84081343 84074882 ID=Msa1083740;Name=Msa1083740
chr7_2 mRNA 84074882 84081343 84074882 ID=Msa1083740-mRNA-1;Parent=Msa1083740;Name=Msa1083740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|0.5|0.4|5|1548|502
chr7_2 exon 84074882 84075755 84074882 ID=Msa1083740-mRNA-1:exon:22297;Parent=Msa1083740-mRNA-1
chr7_2 exon 84076094 84076218 84076094 ID=Msa1083740-mRNA-1:exon:22296;Parent=Msa1083740-mRNA-1
chr7_2 exon 84077589 84077688 84077589 ID=Msa1083740-mRNA-1:exon:22295;Parent=Msa1083740-mRNA-1
chr7_2 exon 84077775 84078988 84077775 ID=Msa1083740-mRNA-1:exon:22294;Parent=Msa1083740-mRNA-1
chr7_2 exon 84080600 84081343 84080600 ID=Msa1083740-mRNA-1:exon:22293;Parent=Msa1083740-mRNA-1
chr7_2 CDS 84080600 84081343 84080600 ID=Msa1083740-mRNA-1:cds;Parent=Msa1083740-mRNA-1
chr7_2 CDS 84078224 84078988 84078224 ID=Msa1083740-mRNA-1:cds;Parent=Msa1083740-mRNA-1
chr7_2 three_prime_UTR 84077775 84078223 84077775 ID=Msa1083740-mRNA-1:three_prime_utr;Parent=Msa1083740-mRNA-1
chr7_2 three_prime_UTR 84077589 84077688 84077589 ID=Msa1083740-mRNA-1:three_prime_utr;Parent=Msa1083740-mRNA-1
chr7_2 three_prime_UTR 84076094 84076218 84076094 ID=Msa1083740-mRNA-1:three_prime_utr;Parent=Msa1083740-mRNA-1
chr7_2 three_prime_UTR 84074882 84075755 84074882 ID=Msa1083740-mRNA-1:three_prime_utr;Parent=Msa1083740-mRNA-1
Gene Sequence

>Msa1083740

ATGGCTTTGAAAACCATTTCACTCTCACTAATCCTCACTCTCATTATCATCTTCTTCATCACAATTCCTCCCTCTCCATCCCTCTTAATCACAACAACTTCTCCTCTTCGTAGATCACTCCTCAACAACATCGCCCCATCTTGCCCCATTCAATCCAATGGCGGCATCCTCAACTACCACTGCATTTTCCCTCAAACTCCCATCCTCTCAATCCCCTCCCTCTCCATTCTCCTCATCCTCCATTTCTACATCCTCATCAAAACCGCTTCTCACCATTTCTCAATCGTCACAACTAAACTCGCTTCTCACCTCAATCTCTCTCCTAGTATGGCCGCCGTCACACTTCTCGCTCTCGGTAACGGCTCTCCCGACGTCTTCTCATCTCTCGCCGCTCTTCGCGCCGGTCAATACCGTACCGGCTTCGGCGCTATACTCTCCGCCGGTGCTTTCGTCTCTGCTCTTGTTGTCGGCTTTGTCGCGATCTACGCTGCTCCTTTTCCCGTTGATCCGGCGCCGTTTGTTAGAGATGTGTTGTTCTACTTAACTGCTGCTATGTTTCTGTTTTATGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGATTCGTTGCGTTCTATCTTTTCTTTGTTGGTTTTGTGTTTTACATGGATTTGGGAATGGCCAATCGGAGGGAAAAGAGTTCTGCGGATCTTGAGGGACAAATTGATTCCTATTACGACGAAAAAGCGTCCGGATCTATTTCCAAGGCATGGGAGCTTCCTGTCTCAACCCTCTTAAGATTGACAATCCCTCAACCAGCACCATCGCAATGGAACAGATTTTATGCATCGGCCAATATCGCTCTTTGTCCACTAGCCCTCTTGTATGCATGTAACTCATTCGTGCCACTTAATCATCCCATAGTTTTCCTCCTCCCTAATACTCTTTTCCCTCTGTGGTCCGTAGTGTTCATGACAAGCTTCTCTCTTGCATTTCTCCATTTTGTATTGGAAAAAGAACCCCCAAAAGCAGAGCATTTGCCTGTGGTGGTTGTGGCCTTCGTTATGAGTGTGTTTTGGATATCTACCACAGCTGGAGAGCTCGTGAATTGCCTTGAAGCTTTAGGCACGCTTCTCAAACTGCCGCAGGCATTCCTAGGTCTTACCGTGCTAGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCCGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAGACGACAAATATATATCCTAAAGCCTATGAACTTAATTTCCACGTTGGTATAGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTCATGGGGTCTCTCTTAGTAATCACTTGGTCCCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTAGGCCTCTATATTGTTTTTATGGCAGCGAGTTCAGCAGTAGCCATCTTTTCAAGTTGA
Protein sequence

>Msa1083740

MALKTISLSLILTLIIIFFITIPPSPSLLITTTSPLRRSLLNNIAPSCPIQSNGGILNYHCIFPQTPILSIPSLSILLILHFYILIKTASHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMANRREKSSADLEGQIDSYYDEKASGSISKAWELPVSTLLRLTIPQPAPSQWNRFYASANIALCPLALLYACNSFVPLNHPIVFLLPNTLFPLWSVVFMTSFSLAFLHFVLEKEPPKAEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPQAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNIYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIVFMAASSAVAIFSS*