AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0966410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0966410 MtrunA17_Chr6g0488891 90.703 441 19 7 1 423 4 440 0.0 708
Msa0966410 MtrunA17_Chr4g0016811 32.231 121 66 1 316 420 116 236 7.64e-16 76.6
Msa0966410 MtrunA17_CPg0492871 32.231 121 66 1 316 420 107 227 7.80e-16 76.6
Msa0966410 MtrunA17_Chr4g0015721 32.231 121 66 1 316 420 107 227 7.80e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0966410 AT4G31040.1 56.616 461 136 12 1 423 4 438 1.74e-172 490
Msa0966410 ATCG00530.1 33.981 103 68 0 318 420 125 227 5.25e-14 71.6

Find 93 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATTGAATATTTGTTTA+TGG 0.174829 6_3:+94610600 Msa0966410:three_prime_UTR
TGAAATATACTCATCACTTT+TGG 0.223046 6_3:-94610159 None:intergenic
ATCTTCTCACGTCGAGCATT+TGG 0.232890 6_3:-94604395 None:intergenic
AGAATCAAGACCATAGAAAA+TGG 0.246090 6_3:+94602888 Msa0966410:CDS
TTGATGTAGTAGTTATTTAT+TGG 0.251952 6_3:-94610478 None:intergenic
CAGAAGCTATTATAGATATA+AGG 0.255265 6_3:+94602846 Msa0966410:CDS
GCAGTAGTTCTTCTTCTTCT+TGG 0.263005 6_3:+94602936 Msa0966410:CDS
GAGATAATTGTCGAGCATTA+TGG 0.263013 6_3:+94608340 Msa0966410:CDS
ATAAACAATATTTCTGATAC+TGG 0.274252 6_3:+94607537 Msa0966410:CDS
GTAGCTTTGCTCAAATTTAC+TGG 0.274892 6_3:+94607504 Msa0966410:CDS
AGAGTGGAATAAAAGATTAT+AGG 0.285564 6_3:+94602960 Msa0966410:CDS
TGGTTTAAGGGAAGATGATA+TGG 0.290571 6_3:+94602742 Msa0966410:intron
CTCTTTCTGATAATGAGGTT+TGG 0.338311 6_3:+94604499 Msa0966410:CDS
GAGTGGAATAAAAGATTATA+GGG 0.338883 6_3:+94602961 Msa0966410:CDS
ATGATTTCAACGAAAATAAC+GGG 0.361681 6_3:+94603005 Msa0966410:CDS
TTCAACAAGATGATGGAAAC+TGG 0.367263 6_3:+94602717 Msa0966410:CDS
CAGTAGTTCTTCTTCTTCTT+GGG 0.368246 6_3:+94602937 Msa0966410:CDS
TTTAAATAAGATGAAATTGT+TGG 0.372207 6_3:-94602531 None:intergenic
TCTTCTCACGTCGAGCATTT+GGG 0.383872 6_3:-94604394 None:intergenic
ATGGAGGGTGCTTCTTCATA+AGG 0.384059 6_3:+94610619 Msa0966410:three_prime_UTR
CTAGTTTACAATTTCATGTC+TGG 0.384336 6_3:+94610197 Msa0966410:exon
GGAGAGGAAGTTATTAGAGT+TGG 0.388683 6_3:-94602585 None:intergenic
TACAGGTATCATTCTGAATC+TGG 0.392809 6_3:+94608301 Msa0966410:intron
AGTGTTGATTATTATACCTT+GGG 0.400456 6_3:+94603474 Msa0966410:CDS
AGATAATTGTCGAGCATTAT+GGG 0.402075 6_3:+94608341 Msa0966410:CDS
TTTGAGCTTGAGGTAGAGAT+TGG 0.410529 6_3:+94604465 Msa0966410:CDS
ATGCATACAAGAATGAGGTT+AGG 0.412627 6_3:-94610279 None:intergenic
TGGAGGGTGCTTCTTCATAA+GGG 0.413115 6_3:+94610620 Msa0966410:three_prime_UTR
AGAAGCTATTATAGATATAA+GGG 0.413200 6_3:+94602847 Msa0966410:CDS
AAAATGGGAAGACTGGCTTT+TGG 0.418846 6_3:+94602904 Msa0966410:CDS
GTTGAGAGATGAGTGGAGAC+TGG 0.423027 6_3:+94605284 Msa0966410:CDS
TTTGCTACGGCTTTATCAAC+TGG 0.436072 6_3:+94610237 Msa0966410:three_prime_UTR
TTGATGCATGCGTGAAACTT+TGG 0.441774 6_3:+94608419 Msa0966410:CDS
TGATGCATGCGTGAAACTTT+GGG 0.444730 6_3:+94608420 Msa0966410:CDS
TCCACCTCTTTCTGATAATG+AGG 0.446773 6_3:+94604494 Msa0966410:CDS
TGCATACAAGAATGAGGTTA+GGG 0.446807 6_3:-94610278 None:intergenic
TAAGGGAAGCACAAGAAGAT+AGG 0.448612 6_3:+94602864 Msa0966410:CDS
ATGAAAGATGTTGAGGATGA+TGG 0.453244 6_3:-94602607 None:intergenic
TTCTGATAATGAGGTTTGGT+GGG 0.458984 6_3:+94604503 Msa0966410:CDS
TCTTCTTCTTCTTGGGAGAG+TGG 0.463042 6_3:+94602944 Msa0966410:CDS
TTATGGGCTTGAAGTTGATC+AGG 0.463345 6_3:+94608357 Msa0966410:CDS
CTATAGTACAAGGCGGTTCA+AGG 0.466591 6_3:+94610417 Msa0966410:three_prime_UTR
GTTCCACGAGTTTCAGCTAC+TGG 0.467289 6_3:+94610340 Msa0966410:three_prime_UTR
GTAGAGCATTTGCCAACATA+TGG 0.472062 6_3:+94605313 Msa0966410:CDS
ACCATAGAAAATGGGAAGAC+TGG 0.481141 6_3:+94602897 Msa0966410:CDS
GATGATTTCAACGAAAATAA+CGG 0.482770 6_3:+94603004 Msa0966410:CDS
GAATCAAGACCATAGAAAAT+GGG 0.490106 6_3:+94602889 Msa0966410:CDS
ATGAGGTTTGGTGGGAATTG+CGG 0.491615 6_3:+94604511 Msa0966410:CDS
CAATTTCATGTCTGGCAAAG+TGG 0.494191 6_3:+94610205 Msa0966410:three_prime_UTR
CAAGATGATGGAAACTGGCT+TGG 0.495134 6_3:+94602722 Msa0966410:CDS
GATTATTATACCTTGGGCAA+TGG 0.495136 6_3:+94603480 Msa0966410:CDS
ATGTAGTAGTTATTTATTGG+CGG 0.497990 6_3:-94610475 None:intergenic
TCTCTACCTCAAGCTCAAAT+CGG 0.502478 6_3:-94604461 None:intergenic
GGAAGATGATATGGTTGAAG+AGG 0.505252 6_3:+94602751 Msa0966410:intron
TTTCTGATAATGAGGTTTGG+TGG 0.513096 6_3:+94604502 Msa0966410:CDS
GAGTGTTGATTATTATACCT+TGG 0.517293 6_3:+94603473 Msa0966410:CDS
GTGGATTCAACTGTTTGCTA+CGG 0.526344 6_3:+94610224 Msa0966410:three_prime_UTR
CTTTATGTGCACATAAAGAA+TGG 0.528373 6_3:+94610442 Msa0966410:three_prime_UTR
GATGTTGAGGATGATGGGAG+AGG 0.528613 6_3:-94602601 None:intergenic
GATTGAATATTTGTTTATGG+AGG 0.541104 6_3:+94610603 Msa0966410:three_prime_UTR
AAATGAAGGTAGTAAAACGT+TGG 0.542544 6_3:-94602637 None:intergenic
TTTACTGGTTCTATAGTACA+AGG 0.545745 6_3:+94610407 Msa0966410:three_prime_UTR
CAAACCTCATTATCAGAAAG+AGG 0.554822 6_3:-94604498 None:intergenic
TGAAAGATGTTGAGGATGAT+GGG 0.556372 6_3:-94602606 None:intergenic
AACAGTTACAATTACACCGT+TGG 0.559401 6_3:-94610320 None:intergenic
TGGAATAAAAGATTATAGGG+AGG 0.565202 6_3:+94602964 Msa0966410:CDS
ATGATGATAATACAAGTTTG+TGG 0.565780 6_3:-94602559 None:intergenic
AAGAAGAAAAGTTCGAAGCA+TGG 0.567823 6_3:+94602813 Msa0966410:CDS
AATAAATGCATACAAGAATG+AGG 0.570300 6_3:-94610284 None:intergenic
AAATTCCTGTGGGTTCGCAC+AGG 0.572231 6_3:-94610386 None:intergenic
ACGCATGCATCAACGATGAC+TGG 0.582155 6_3:-94608409 None:intergenic
ATTGATATTGAAATGTCCAA+CGG 0.583439 6_3:+94610304 Msa0966410:three_prime_UTR
ATTGAATATTTGTTTATGGA+GGG 0.584106 6_3:+94610604 Msa0966410:three_prime_UTR
GGTATCATTCTGAATCTGGT+TGG 0.589009 6_3:+94608305 Msa0966410:intron
TCGAGCATTTGGGCGGCTAG+TGG 0.594965 6_3:-94604384 None:intergenic
GCAGACCTGTGCGAACCCAC+AGG 0.595390 6_3:+94610381 Msa0966410:three_prime_UTR
CAATATTTCTGATACTGGGA+AGG 0.598189 6_3:+94607542 Msa0966410:CDS
GATTAGAGTTGAGAGATGAG+TGG 0.598836 6_3:+94605277 Msa0966410:intron
GGAGGGTGCTTCTTCATAAG+GGG 0.598914 6_3:+94610621 Msa0966410:three_prime_UTR
TAAACAATATTTCTGATACT+GGG 0.599714 6_3:+94607538 Msa0966410:CDS
AGAGGATGTTGAATTTGAAG+TGG 0.607061 6_3:+94602769 Msa0966410:CDS
TAGAACCAGTAAAATTCCTG+TGG 0.609303 6_3:-94610397 None:intergenic
GAAAAGCCGATTTGAGCTTG+AGG 0.623474 6_3:+94604455 Msa0966410:CDS
AACTGTGTCAGACCATATGT+TGG 0.629492 6_3:-94605325 None:intergenic
ACCTCATTATCAGAAAGAGG+TGG 0.641204 6_3:-94604495 None:intergenic
ACTAGAAAATCCATTGCCCA+AGG 0.642290 6_3:-94603490 None:intergenic
AGAACCAGTAAAATTCCTGT+GGG 0.644208 6_3:-94610396 None:intergenic
TAGGGAGGAGTTACGAGGCG+AGG 0.650202 6_3:+94602979 Msa0966410:CDS
GATTATAGGGAGGAGTTACG+AGG 0.665569 6_3:+94602974 Msa0966410:CDS
GAACCAGTAGCTGAAACTCG+TGG 0.676599 6_3:-94610343 None:intergenic
TCTCACGTCGAGCATTTGGG+CGG 0.699045 6_3:-94604391 None:intergenic
ACTGGTTCTATAGTACAAGG+CGG 0.732904 6_3:+94610410 Msa0966410:three_prime_UTR
TGATTTCAACGAAAATAACG+GGG 0.743389 6_3:+94603006 Msa0966410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCCTAAATATATTAAA+TGG - chr6_3:94605577-94605596 None:intergenic 10.0%
!! TAATATATTTAGGAAATATT+TGG + chr6_3:94605579-94605598 Msa0966410:intron 10.0%
!!! AAAAGACATTTTTAATATTA+AGG + chr6_3:94605898-94605917 Msa0966410:intron 10.0%
!! AATATTAAGAGATATAAATT+AGG + chr6_3:94606986-94607005 Msa0966410:intron 10.0%
!! AATTATAAAATGAATATACA+AGG + chr6_3:94608574-94608593 Msa0966410:intron 10.0%
!! ATTATAAAATGAATATACAA+GGG + chr6_3:94608575-94608594 Msa0966410:intron 10.0%
!! TAATAATTATGATTAACTAA+TGG + chr6_3:94608794-94608813 Msa0966410:intron 10.0%
!! TTTAAATAAGATGAAATTGT+TGG - chr6_3:94602534-94602553 None:intergenic 15.0%
!!! TACTTAAAAGCTTTATTTAT+TGG + chr6_3:94603336-94603355 Msa0966410:intron 15.0%
!!! TAAACAAAGCTATTAATTTT+AGG + chr6_3:94604203-94604222 Msa0966410:intron 15.0%
!!! AATCTATAATACTTTAAGAT+AGG - chr6_3:94604806-94604825 None:intergenic 15.0%
!! GCAAAAAAAAAAAAATAGAA+GGG - chr6_3:94605250-94605269 None:intergenic 15.0%
!! AGCAAAAAAAAAAAAATAGA+AGG - chr6_3:94605251-94605270 None:intergenic 15.0%
!! ATAAACATATTAAATATCCT+TGG + chr6_3:94607454-94607473 Msa0966410:intron 15.0%
!! TACTTTCAAATATTTCTTAA+TGG - chr6_3:94607974-94607993 None:intergenic 15.0%
!! TATAAATCTGTTAAAGAAAT+TGG + chr6_3:94608500-94608519 Msa0966410:intron 15.0%
!! TATCATATCATATCTAATAT+GGG - chr6_3:94609583-94609602 None:intergenic 15.0%
!! ATATCATATCATATCTAATA+TGG - chr6_3:94609584-94609603 None:intergenic 15.0%
!!! TTTCTTGTTTTTATGGTTTT+TGG - chr6_3:94602669-94602688 None:intergenic 20.0%
!!! TACTGTTTTTCTTGTTTTTA+TGG - chr6_3:94602676-94602695 None:intergenic 20.0%
!!! AAATTTTTTCAACAAGATGA+TGG + chr6_3:94602710-94602729 Msa0966410:CDS 20.0%
!! AGAAGCTATTATAGATATAA+GGG + chr6_3:94602847-94602866 Msa0966410:CDS 20.0%
!!! TCTGTTAAGTATTTGATTTT+TGG + chr6_3:94603037-94603056 Msa0966410:CDS 20.0%
!!! ATAATGCATTCTCTAATTTT+AGG + chr6_3:94603165-94603184 Msa0966410:intron 20.0%
!!! TAATGCATTCTCTAATTTTA+GGG + chr6_3:94603166-94603185 Msa0966410:intron 20.0%
!! TGAGTTACTACTATTAATAA+GGG - chr6_3:94603408-94603427 None:intergenic 20.0%
!! TTGAGTTACTACTATTAATA+AGG - chr6_3:94603409-94603428 None:intergenic 20.0%
!! TAAAGAATCATTAAACTAAG+AGG - chr6_3:94604154-94604173 None:intergenic 20.0%
!! TGTTAGTGATCATTAAAATT+AGG + chr6_3:94604640-94604659 Msa0966410:intron 20.0%
!! AATATCTTAACTTATCTCTT+AGG + chr6_3:94604765-94604784 Msa0966410:intron 20.0%
!! ATAGATTATCTCTTAGTATT+AGG + chr6_3:94604819-94604838 Msa0966410:intron 20.0%
!! TAGACAATTTATAAAACACT+AGG - chr6_3:94604931-94604950 None:intergenic 20.0%
!!! AAGACTTTTTATCATGAATA+TGG - chr6_3:94604959-94604978 None:intergenic 20.0%
!!! TGAAAATTTTATGATAAGGA+CGG - chr6_3:94605001-94605020 None:intergenic 20.0%
!!! AAGGTGAAAATTTTATGATA+AGG - chr6_3:94605005-94605024 None:intergenic 20.0%
!! TAAACTTGATGAAGATTAAA+GGG - chr6_3:94605059-94605078 None:intergenic 20.0%
!! AAAAAAATAGAAGGGAAATA+AGG - chr6_3:94605242-94605261 None:intergenic 20.0%
!! AAAAATAACAGTGATGTTTA+TGG - chr6_3:94605469-94605488 None:intergenic 20.0%
!! GACTTCCATTTAATATATTT+AGG + chr6_3:94605569-94605588 Msa0966410:intron 20.0%
!! TATTTAGGAAATATTTGGTT+TGG + chr6_3:94605584-94605603 Msa0966410:intron 20.0%
!!! GTCTAAATAAATGTTGTTTT+AGG + chr6_3:94605611-94605630 Msa0966410:intron 20.0%
!!! TATTTTTCAAATCAAACTCA+AGG + chr6_3:94605752-94605771 Msa0966410:intron 20.0%
!! TTAATATTAAGGTGATACAA+AGG + chr6_3:94605909-94605928 Msa0966410:intron 20.0%
!! AAAAAGTTATAAATAACACG+TGG + chr6_3:94606298-94606317 Msa0966410:intron 20.0%
!! TATGCTGAATATATATGAAT+AGG + chr6_3:94606415-94606434 Msa0966410:intron 20.0%
!! TAAGATACTATCATATATTC+TGG + chr6_3:94607036-94607055 Msa0966410:intron 20.0%
!!! GTTTCTCTTATAGTTTTTAA+AGG - chr6_3:94607142-94607161 None:intergenic 20.0%
!! TAATGAGTTAGATAGAAATA+TGG + chr6_3:94607183-94607202 Msa0966410:intron 20.0%
!!! ATAAACAATATTTCTGATAC+TGG + chr6_3:94607537-94607556 Msa0966410:CDS 20.0%
!!! TAAACAATATTTCTGATACT+GGG + chr6_3:94607538-94607557 Msa0966410:CDS 20.0%
!! ATAGATAACAATTATCAAGT+TGG - chr6_3:94607618-94607637 None:intergenic 20.0%
!! ATAGGTTTATTAAATCAAGT+AGG - chr6_3:94608225-94608244 None:intergenic 20.0%
!! AAGAGAAGCTAAAATAAAAT+AGG - chr6_3:94608243-94608262 None:intergenic 20.0%
!! AAAGCAAACAAAAATAGTAA+TGG - chr6_3:94608386-94608405 None:intergenic 20.0%
!! ATTTATGTTAAGTTTGTACA+AGG - chr6_3:94608709-94608728 None:intergenic 20.0%
!! AGTGAAATACAAAATGTTAA+AGG + chr6_3:94608758-94608777 Msa0966410:intron 20.0%
!! GTGAAATACAAAATGTTAAA+GGG + chr6_3:94608759-94608778 Msa0966410:intron 20.0%
!! TGAAATACAAAATGTTAAAG+GGG + chr6_3:94608760-94608779 Msa0966410:intron 20.0%
!! AATTTGATTGGATTCTAAAT+AGG + chr6_3:94608949-94608968 Msa0966410:intron 20.0%
!!! AATGATACAATCTTTGATTT+TGG - chr6_3:94609214-94609233 None:intergenic 20.0%
!!! TTTTTTTAGAAAGCCAAAAT+AGG - chr6_3:94609774-94609793 None:intergenic 20.0%
!! TGTAATATTATTCAAGACAA+AGG - chr6_3:94610009-94610028 None:intergenic 20.0%
!! TTGTCTTGAATAATATTACA+AGG + chr6_3:94610009-94610028 Msa0966410:intron 20.0%
!! TTGATGTAGTAGTTATTTAT+TGG - chr6_3:94610481-94610500 None:intergenic 20.0%
!! TGAGATTGAATATTTGTTTA+TGG + chr6_3:94610600-94610619 Msa0966410:three_prime_UTR 20.0%
!! ATTGAATATTTGTTTATGGA+GGG + chr6_3:94610604-94610623 Msa0966410:three_prime_UTR 20.0%
! ATGATGATAATACAAGTTTG+TGG - chr6_3:94602562-94602581 None:intergenic 25.0%
!!! TTTTGAAATGAAAGATGTTG+AGG - chr6_3:94602617-94602636 None:intergenic 25.0%
! CAGAAGCTATTATAGATATA+AGG + chr6_3:94602846-94602865 Msa0966410:CDS 25.0%
! AGAGTGGAATAAAAGATTAT+AGG + chr6_3:94602960-94602979 Msa0966410:CDS 25.0%
! GAGTGGAATAAAAGATTATA+GGG + chr6_3:94602961-94602980 Msa0966410:CDS 25.0%
! GATGATTTCAACGAAAATAA+CGG + chr6_3:94603004-94603023 Msa0966410:CDS 25.0%
! ATGATTTCAACGAAAATAAC+GGG + chr6_3:94603005-94603024 Msa0966410:CDS 25.0%
!! AAGAAGCATAGTTAAAAACA+CGG - chr6_3:94603108-94603127 None:intergenic 25.0%
! TAACTATGCTTCTTCAAATT+CGG + chr6_3:94603114-94603133 Msa0966410:intron 25.0%
!!! TTTGGATTGACTTATTTTTG+AGG + chr6_3:94603193-94603212 Msa0966410:intron 25.0%
!!! TTGACTTATTTTTGAGGATA+TGG + chr6_3:94603199-94603218 Msa0966410:intron 25.0%
! TATTACTCACAAGCTTATTA+AGG - chr6_3:94603318-94603337 None:intergenic 25.0%
!! TTATTGCAGGCTAAATTTTT+GGG + chr6_3:94603451-94603470 Msa0966410:intron 25.0%
!!! AGTGTTGATTATTATACCTT+GGG + chr6_3:94603474-94603493 Msa0966410:CDS 25.0%
! ATAGATTACCTGTCTAAAAA+AGG - chr6_3:94603535-94603554 None:intergenic 25.0%
!!! TGATTGTTTTTCCTTCTAAT+TGG + chr6_3:94604320-94604339 Msa0966410:intron 25.0%
! TCAAAAACTTCAAATGATTG+AGG + chr6_3:94604419-94604438 Msa0966410:CDS 25.0%
!! CATCTAACAATTTCCATTTT+GGG - chr6_3:94604619-94604638 None:intergenic 25.0%
!! TCATCTAACAATTTCCATTT+TGG - chr6_3:94604620-94604639 None:intergenic 25.0%
! TAACTTATCTCTTAGGATTT+AGG + chr6_3:94604772-94604791 Msa0966410:intron 25.0%
! ATGCTAACAATTAAGAAACA+TGG - chr6_3:94604847-94604866 None:intergenic 25.0%
! CTCGTAATTCTAATCAAATA+GGG - chr6_3:94604879-94604898 None:intergenic 25.0%
! ACTCGTAATTCTAATCAAAT+AGG - chr6_3:94604880-94604899 None:intergenic 25.0%
! TTTAGCATGATTATTCGTAA+AGG - chr6_3:94605024-94605043 None:intergenic 25.0%
! GTAAACTTGATGAAGATTAA+AGG - chr6_3:94605060-94605079 None:intergenic 25.0%
!!! TTAGTGTCATTTGTTTAAGA+TGG + chr6_3:94605182-94605201 Msa0966410:intron 25.0%
! GTATCAAAACATTTAGCATA+AGG - chr6_3:94605417-94605436 None:intergenic 25.0%
! GAAAATACGTTCAACAAAAT+TGG - chr6_3:94605444-94605463 None:intergenic 25.0%
! GAACAAACTTATTTATCTTG+TGG - chr6_3:94605689-94605708 None:intergenic 25.0%
! AAGTTACACAAATCATTGTA+TGG - chr6_3:94605798-94605817 None:intergenic 25.0%
!!! TTTTTTCATAGACTTAGCAT+AGG - chr6_3:94605882-94605901 None:intergenic 25.0%
! GAAAATCTATGGTAAGTTAT+TGG - chr6_3:94606109-94606128 None:intergenic 25.0%
!! TATCAGAAACAAAAGCATAA+TGG + chr6_3:94606253-94606272 Msa0966410:intron 25.0%
!! ATAAATAACACGTGGATTAA+AGG + chr6_3:94606306-94606325 Msa0966410:intron 25.0%
! GAAATGTGTAGATTAAAAGA+AGG + chr6_3:94606842-94606861 Msa0966410:intron 25.0%
! AATTAAGAGATTGAAACCTA+GGG + chr6_3:94607082-94607101 Msa0966410:intron 25.0%
!! CTATTCTTTTTACAAAAGTG+TGG - chr6_3:94607114-94607133 None:intergenic 25.0%
!! CACACTTTTGTAAAAAGAAT+AGG + chr6_3:94607112-94607131 Msa0966410:intron 25.0%
! AAACTATAAGAGAAACGATT+AGG + chr6_3:94607146-94607165 Msa0966410:intron 25.0%
! TGGTATATGATAGAACATTA+TGG + chr6_3:94607203-94607222 Msa0966410:intron 25.0%
! TGTTGTTGTATTTGTTCATT+TGG + chr6_3:94607281-94607300 Msa0966410:intron 25.0%
!! TTATCACAGATATTTTCCTA+GGG + chr6_3:94607580-94607599 Msa0966410:CDS 25.0%
!!! AACAATTATCAAGTTGGAAA+AGG - chr6_3:94607612-94607631 None:intergenic 25.0%
! AATATGATACAATGTGGATA+TGG - chr6_3:94607839-94607858 None:intergenic 25.0%
! AATGCTTTGTATAATGTATC+AGG - chr6_3:94608014-94608033 None:intergenic 25.0%
! TGCCATTAAATGATTTAAGT+AGG + chr6_3:94608035-94608054 Msa0966410:intron 25.0%
! AGCCTACTTAAATCATTTAA+TGG - chr6_3:94608040-94608059 None:intergenic 25.0%
!! TTTACTCTTTTGTTGCATAT+TGG + chr6_3:94608272-94608291 Msa0966410:intron 25.0%
!! TTACTCTTTTGTTGCATATT+GGG + chr6_3:94608273-94608292 Msa0966410:intron 25.0%
!!! GCTAAATGTCATTGATTTTA+TGG + chr6_3:94608465-94608484 Msa0966410:intron 25.0%
!! CAACTAATGTTCAAGTTATT+AGG - chr6_3:94608532-94608551 None:intergenic 25.0%
! GAAATACAAAATGTTAAAGG+GGG + chr6_3:94608761-94608780 Msa0966410:intron 25.0%
! GAGATACATTGAAATTTGAT+TGG + chr6_3:94608937-94608956 Msa0966410:intron 25.0%
!!! CAGTTTTTTTTTATTGTCAG+TGG + chr6_3:94609030-94609049 Msa0966410:intron 25.0%
!!! TTTTTTTTTATTGTCAGTGG+AGG + chr6_3:94609033-94609052 Msa0966410:intron 25.0%
!!! TTTTTTTTATTGTCAGTGGA+GGG + chr6_3:94609034-94609053 Msa0966410:intron 25.0%
!!! CCACTTATATATGCTTTTTT+GGG - chr6_3:94609431-94609450 None:intergenic 25.0%
!!! ACCACTTATATATGCTTTTT+TGG - chr6_3:94609432-94609451 None:intergenic 25.0%
!! AAAAAAGCATATATAAGTGG+TGG + chr6_3:94609431-94609450 Msa0966410:intron 25.0%
!! AAAAAGCATATATAAGTGGT+GGG + chr6_3:94609432-94609451 Msa0966410:intron 25.0%
!!! ACACTTCAGTTTTTCAATAT+TGG + chr6_3:94609534-94609553 Msa0966410:intron 25.0%
! GAAAATCTGTTTATAAGTGA+CGG + chr6_3:94609609-94609628 Msa0966410:intron 25.0%
!! GAAATCTTCTTGATTTTACT+TGG + chr6_3:94609695-94609714 Msa0966410:intron 25.0%
!!! GACATATCTTGAAAGTATTT+TGG - chr6_3:94609800-94609819 None:intergenic 25.0%
!! TGACAGTACAATTTTTATAG+CGG - chr6_3:94610058-94610077 None:intergenic 25.0%
!!! AAATATACTCATCACTTTTG+GGG - chr6_3:94610160-94610179 None:intergenic 25.0%
!!! GAAATATACTCATCACTTTT+GGG - chr6_3:94610161-94610180 None:intergenic 25.0%
!! TGAAATATACTCATCACTTT+TGG - chr6_3:94610162-94610181 None:intergenic 25.0%
! AATAAATGCATACAAGAATG+AGG - chr6_3:94610287-94610306 None:intergenic 25.0%
! ATTGATATTGAAATGTCCAA+CGG + chr6_3:94610304-94610323 Msa0966410:three_prime_UTR 25.0%
! ATGTAGTAGTTATTTATTGG+CGG - chr6_3:94610478-94610497 None:intergenic 25.0%
! GATTGAATATTTGTTTATGG+AGG + chr6_3:94610603-94610622 Msa0966410:three_prime_UTR 25.0%
AAATGAAGGTAGTAAAACGT+TGG - chr6_3:94602640-94602659 None:intergenic 30.0%
!!! GTTTTTGGCTTTTGAAATGA+AGG - chr6_3:94602654-94602673 None:intergenic 30.0%
AGAATCAAGACCATAGAAAA+TGG + chr6_3:94602888-94602907 Msa0966410:CDS 30.0%
GAATCAAGACCATAGAAAAT+GGG + chr6_3:94602889-94602908 Msa0966410:CDS 30.0%
TGGAATAAAAGATTATAGGG+AGG + chr6_3:94602964-94602983 Msa0966410:CDS 30.0%
TGATTTCAACGAAAATAACG+GGG + chr6_3:94603006-94603025 Msa0966410:CDS 30.0%
!! TTGATTTTTGGAAGAGAAGA+TGG + chr6_3:94603049-94603068 Msa0966410:CDS 30.0%
CAAGCTTATTAAGGTAGTTA+TGG - chr6_3:94603309-94603328 None:intergenic 30.0%
CAAAAATAAGCCAATCCAAA+CGG + chr6_3:94603381-94603400 Msa0966410:intron 30.0%
AAAAATAAGCCAATCCAAAC+GGG + chr6_3:94603382-94603401 Msa0966410:intron 30.0%
! GTTATTGCAGGCTAAATTTT+TGG + chr6_3:94603450-94603469 Msa0966410:intron 30.0%
!! GAGTGTTGATTATTATACCT+TGG + chr6_3:94603473-94603492 Msa0966410:CDS 30.0%
!! TCCATTCATAAGTTTTATGC+TGG + chr6_3:94603584-94603603 Msa0966410:intron 30.0%
ACCAGCATAAAACTTATGAA+TGG - chr6_3:94603588-94603607 None:intergenic 30.0%
! AGTTAGCTATCTAGCTTATA+AGG - chr6_3:94603684-94603703 None:intergenic 30.0%
! AGCTAGATAGCTAACTTTTA+AGG + chr6_3:94603688-94603707 Msa0966410:intron 30.0%
! GCTAGATAGCTAACTTTTAA+GGG + chr6_3:94603689-94603708 Msa0966410:intron 30.0%
!! TGATAGGATTTTGGGTATTA+TGG + chr6_3:94603870-94603889 Msa0966410:intron 30.0%
CTTAATTGCTAGATATCAAG+GGG - chr6_3:94603961-94603980 None:intergenic 30.0%
CCTTAATTGCTAGATATCAA+GGG - chr6_3:94603962-94603981 None:intergenic 30.0%
CCTTGATATCTAGCAATTAA+GGG + chr6_3:94603960-94603979 Msa0966410:intron 30.0%
! GATAAATATCCAAGCACTTT+TGG - chr6_3:94603992-94604011 None:intergenic 30.0%
! TTGCTTTCTTTTTCTTGAGT+AGG + chr6_3:94604246-94604265 Msa0966410:intron 30.0%
AAGTTGCTTAACCAATTAGA+AGG - chr6_3:94604334-94604353 None:intergenic 30.0%
! CATGCTCATTTAAGATAATC+AGG - chr6_3:94604570-94604589 None:intergenic 30.0%
TATCTTAAATGAGCATGAAG+TGG + chr6_3:94604573-94604592 Msa0966410:intron 30.0%
AATTCAGGAAATTCCCAAAA+TGG + chr6_3:94604603-94604622 Msa0966410:intron 30.0%
TTATAAAACACCTTGTGAAC+TGG + chr6_3:94605092-94605111 Msa0966410:intron 30.0%
AAAGATAATAAACCTAGTCC+TGG + chr6_3:94605131-94605150 Msa0966410:intron 30.0%
AACAATAAACTAACAAGTCC+AGG - chr6_3:94605152-94605171 None:intergenic 30.0%
!!! TGCTATCCCAATTTTGAAAT+TGG - chr6_3:94605538-94605557 None:intergenic 30.0%
AATTTCAAAATTGGGATAGC+AGG + chr6_3:94605537-94605556 Msa0966410:intron 30.0%
ATTTCAAAATTGGGATAGCA+GGG + chr6_3:94605538-94605557 Msa0966410:intron 30.0%
! ATTTCAGGTAATGATCAAGA+AGG - chr6_3:94605646-94605665 None:intergenic 30.0%
! GTAGATGATATTGTCATTTC+AGG - chr6_3:94605661-94605680 None:intergenic 30.0%
! ATTTGTGTAACTTGCAAACA+AGG + chr6_3:94605805-94605824 Msa0966410:intron 30.0%
ATCTATGGTAAGTTATTGGT+GGG - chr6_3:94606105-94606124 None:intergenic 30.0%
AATCTATGGTAAGTTATTGG+TGG - chr6_3:94606106-94606125 None:intergenic 30.0%
! AACAGATTTTACTCCTTTTC+AGG - chr6_3:94606446-94606465 None:intergenic 30.0%
!! AGCAAATGTTACTTTCTTTG+AGG - chr6_3:94606510-94606529 None:intergenic 30.0%
ACATAAAAACGATGTGTAGA+TGG + chr6_3:94606533-94606552 Msa0966410:intron 30.0%
ATTGAAAGTGGTCAAACTTA+TGG + chr6_3:94606645-94606664 Msa0966410:intron 30.0%
TGAGTGTCATATTGGATTAA+AGG + chr6_3:94606712-94606731 Msa0966410:intron 30.0%
GAGTGTCATATTGGATTAAA+GGG + chr6_3:94606713-94606732 Msa0966410:intron 30.0%
! TTCAACTAGTTCTTTGTATG+AGG + chr6_3:94606737-94606756 Msa0966410:intron 30.0%
ATGAGGAATGGTTTATTGAA+TGG + chr6_3:94606754-94606773 Msa0966410:intron 30.0%
TAATCTACACATTTCTTTCC+AGG - chr6_3:94606837-94606856 None:intergenic 30.0%
! ACTGTTACATTTCTCCTTTT+TGG - chr6_3:94606880-94606899 None:intergenic 30.0%
ATACTATCATATATTCTGGC+AGG + chr6_3:94607040-94607059 Msa0966410:intron 30.0%
!! TCTCTTAATTGCTGATTCAT+AGG - chr6_3:94607072-94607091 None:intergenic 30.0%
CAATTAAGAGATTGAAACCT+AGG + chr6_3:94607081-94607100 Msa0966410:intron 30.0%
ATGATAGAACATTATGGCAT+CGG + chr6_3:94607209-94607228 Msa0966410:intron 30.0%
GTTGTATTTGTTCATTTGGT+TGG + chr6_3:94607285-94607304 Msa0966410:intron 30.0%
CCTCCTAAAAAATTAGTGTT+CGG - chr6_3:94607313-94607332 None:intergenic 30.0%
CCAAAATAGGAAAACAACTT+AGG - chr6_3:94607391-94607410 None:intergenic 30.0%
!! CCTAAGTTGTTTTCCTATTT+TGG + chr6_3:94607388-94607407 Msa0966410:intron 30.0%
TAAACATCAACGACCAAAAT+AGG - chr6_3:94607404-94607423 None:intergenic 30.0%
! CTTATCACAGATATTTTCCT+AGG + chr6_3:94607579-94607598 Msa0966410:CDS 30.0%
!!! TGTTTTGACTTTTGAATGCA+TGG - chr6_3:94607712-94607731 None:intergenic 30.0%
GACACAAATATGATACAATG+TGG - chr6_3:94607845-94607864 None:intergenic 30.0%
TTCTATTAGCAACCTTTGAT+AGG + chr6_3:94608195-94608214 Msa0966410:intron 30.0%
AGATAATTGTCGAGCATTAT+GGG + chr6_3:94608341-94608360 Msa0966410:CDS 30.0%
GCAAACAAAAATAGTAATGG+CGG - chr6_3:94608383-94608402 None:intergenic 30.0%
! ATGTTCAAGTTATTAGGTAG+AGG - chr6_3:94608526-94608545 None:intergenic 30.0%
AGTAACCAATTAGCAAATGA+TGG - chr6_3:94608833-94608852 None:intergenic 30.0%
CTATTTGACCTCAATAATGT+GGG - chr6_3:94608864-94608883 None:intergenic 30.0%
TCTATTTGACCTCAATAATG+TGG - chr6_3:94608865-94608884 None:intergenic 30.0%
ATAGTACATAACCTTCTTTG+TGG + chr6_3:94608890-94608909 Msa0966410:intron 30.0%
ACTACAAATTCCATATCTCA+AGG - chr6_3:94609181-94609200 None:intergenic 30.0%
AAGATTGTATCATTGTTGAG+AGG + chr6_3:94609220-94609239 Msa0966410:intron 30.0%
AGATTGTATCATTGTTGAGA+GGG + chr6_3:94609221-94609240 Msa0966410:intron 30.0%
! CCCAAAAAAGCATATATAAG+TGG + chr6_3:94609428-94609447 Msa0966410:intron 30.0%
!! AAAACCGACTTGTATAGTAA+GGG - chr6_3:94609461-94609480 None:intergenic 30.0%
ATTTCCTAAACTAGGTTATG+AGG - chr6_3:94609680-94609699 None:intergenic 30.0%
TCAAGAAGATTTCCTAAACT+AGG - chr6_3:94609688-94609707 None:intergenic 30.0%
!! TTGGCACTGATATTAGATAA+TGG - chr6_3:94609748-94609767 None:intergenic 30.0%
AGAAAGCCAAAATAGGATAT+TGG - chr6_3:94609767-94609786 None:intergenic 30.0%
!!! AAGGTTGCTATTTTGTTACA+TGG - chr6_3:94609916-94609935 None:intergenic 30.0%
ATAATATTCAAACCTACTGC+AGG - chr6_3:94609969-94609988 None:intergenic 30.0%
ACTGTCAATTACTTTGTAGT+TGG + chr6_3:94610071-94610090 Msa0966410:intron 30.0%
TGCATCACAAAAACAATAAG+GGG - chr6_3:94610111-94610130 None:intergenic 30.0%
CTGCATCACAAAAACAATAA+GGG - chr6_3:94610112-94610131 None:intergenic 30.0%
CTAGTTTACAATTTCATGTC+TGG + chr6_3:94610197-94610216 Msa0966410:exon 30.0%
!! TTTACTGGTTCTATAGTACA+AGG + chr6_3:94610407-94610426 Msa0966410:three_prime_UTR 30.0%
CTTTATGTGCACATAAAGAA+TGG + chr6_3:94610442-94610461 Msa0966410:three_prime_UTR 30.0%
TGAAAGATGTTGAGGATGAT+GGG - chr6_3:94602609-94602628 None:intergenic 35.0%
ATGAAAGATGTTGAGGATGA+TGG - chr6_3:94602610-94602629 None:intergenic 35.0%
ACAAGAAAAACAGTACCACT+TGG + chr6_3:94602681-94602700 Msa0966410:CDS 35.0%
AAAAAATTTCTGCCACCAAG+TGG - chr6_3:94602699-94602718 None:intergenic 35.0%
!! TTCAACAAGATGATGGAAAC+TGG + chr6_3:94602717-94602736 Msa0966410:CDS 35.0%
TGGTTTAAGGGAAGATGATA+TGG + chr6_3:94602742-94602761 Msa0966410:intron 35.0%
AGAGGATGTTGAATTTGAAG+TGG + chr6_3:94602769-94602788 Msa0966410:CDS 35.0%
AAGAAGAAAAGTTCGAAGCA+TGG + chr6_3:94602813-94602832 Msa0966410:CDS 35.0%
CAGTAGTTCTTCTTCTTCTT+GGG + chr6_3:94602937-94602956 Msa0966410:CDS 35.0%
!! ATTTTTGGAAGAGAAGATGG+TGG + chr6_3:94603052-94603071 Msa0966410:CDS 35.0%
!!! CTCTAATTTTAGGGCTAGTT+TGG + chr6_3:94603175-94603194 Msa0966410:intron 35.0%
!! CTGAAACTGTTTGTTATTGC+AGG + chr6_3:94603438-94603457 Msa0966410:intron 35.0%
GATTATTATACCTTGGGCAA+TGG + chr6_3:94603480-94603499 Msa0966410:CDS 35.0%
!!! TACTCATGCCTTTTTTAGAC+AGG + chr6_3:94603524-94603543 Msa0966410:CDS 35.0%
! TGGTTTGCAAAATTGCTTGA+AGG + chr6_3:94603604-94603623 Msa0966410:intron 35.0%
CAAAATTGCTTGAAGGAAGA+TGG + chr6_3:94603611-94603630 Msa0966410:intron 35.0%
TCAGATTAACCTCATTAGAC+TGG - chr6_3:94603637-94603656 None:intergenic 35.0%
! GGTTAATCTGAGATGTAAAG+AGG + chr6_3:94603646-94603665 Msa0966410:intron 35.0%
! TAATCTGAGATGTAAAGAGG+AGG + chr6_3:94603649-94603668 Msa0966410:intron 35.0%
!!! TGGTGCTATGATAGGATTTT+GGG + chr6_3:94603862-94603881 Msa0966410:intron 35.0%
CCCTTGATATCTAGCAATTA+AGG + chr6_3:94603959-94603978 Msa0966410:intron 35.0%
CCCTTAATTGCTAGATATCA+AGG - chr6_3:94603963-94603982 None:intergenic 35.0%
TGATATCTAGCAATTAAGGG+AGG + chr6_3:94603963-94603982 Msa0966410:intron 35.0%
GATATCTAGCAATTAAGGGA+GGG + chr6_3:94603964-94603983 Msa0966410:intron 35.0%
! ATGAATATTCAGAGCACTCT+TGG - chr6_3:94604083-94604102 None:intergenic 35.0%
GTGTGTTTGTTTAAACTTGC+TGG + chr6_3:94604295-94604314 Msa0966410:intron 35.0%
CAAACCTCATTATCAGAAAG+AGG - chr6_3:94604501-94604520 None:intergenic 35.0%
! CTCTTTCTGATAATGAGGTT+TGG + chr6_3:94604499-94604518 Msa0966410:CDS 35.0%
! TTTCTGATAATGAGGTTTGG+TGG + chr6_3:94604502-94604521 Msa0966410:CDS 35.0%
! TTCTGATAATGAGGTTTGGT+GGG + chr6_3:94604503-94604522 Msa0966410:CDS 35.0%
TGAAGTGGTACTTTGAATTC+AGG + chr6_3:94604588-94604607 Msa0966410:intron 35.0%
! ATATGGTCTGACACAGTTTT+CGG + chr6_3:94605330-94605349 Msa0966410:CDS 35.0%
ATGCAAAAATGGCGTTTGTT+CGG - chr6_3:94605968-94605987 None:intergenic 35.0%
AAATGATCCACTTGTTCATC+AGG + chr6_3:94606059-94606078 Msa0966410:intron 35.0%
AATGATCCACTTGTTCATCA+GGG + chr6_3:94606060-94606079 Msa0966410:intron 35.0%
TCATCAGGGCTTTCTTTAAT+AGG + chr6_3:94606074-94606093 Msa0966410:intron 35.0%
! CTTACCATAGATTTTCCAGA+AGG + chr6_3:94606113-94606132 Msa0966410:intron 35.0%
! TCTTCCTTCTGGAAAATCTA+TGG - chr6_3:94606120-94606139 None:intergenic 35.0%
! ATAGATTTTCCAGAAGGAAG+AGG + chr6_3:94606119-94606138 Msa0966410:intron 35.0%
!! GAAACAAAAGCATAATGGAC+AGG + chr6_3:94606258-94606277 Msa0966410:intron 35.0%
GTCACTCATAAGTAATACCA+AGG + chr6_3:94606340-94606359 Msa0966410:intron 35.0%
ACTCATAAGTAATACCAAGG+TGG + chr6_3:94606343-94606362 Msa0966410:intron 35.0%
TGAATAGGTAGTACCTGAAA+AGG + chr6_3:94606430-94606449 Msa0966410:intron 35.0%
TCGCATCACTAACTATATCA+GGG - chr6_3:94606474-94606493 None:intergenic 35.0%
TTCGCATCACTAACTATATC+AGG - chr6_3:94606475-94606494 None:intergenic 35.0%
TAGTTAGTGATGCGAAGTAT+TGG + chr6_3:94606479-94606498 Msa0966410:intron 35.0%
GGTATTCAAGAGTTCAAATG+GGG - chr6_3:94606574-94606593 None:intergenic 35.0%
GGGTATTCAAGAGTTCAAAT+GGG - chr6_3:94606575-94606594 None:intergenic 35.0%
TGGGTATTCAAGAGTTCAAA+TGG - chr6_3:94606576-94606595 None:intergenic 35.0%
CTGCTAAGTGTGTATTTCTT+GGG - chr6_3:94606595-94606614 None:intergenic 35.0%
CACAACAACGAAATTGAAAG+TGG + chr6_3:94606633-94606652 Msa0966410:intron 35.0%
! CTAGTTCTTTGTATGAGGAA+TGG + chr6_3:94606742-94606761 Msa0966410:intron 35.0%
GATGTTCAGGATTACTATCT+AGG - chr6_3:94606798-94606817 None:intergenic 35.0%
!!! TTTCTCCTTTTTGGTTTCAC+AGG - chr6_3:94606871-94606890 None:intergenic 35.0%
CTAACAGTTCCAAACAGAAT+GGG - chr6_3:94606912-94606931 None:intergenic 35.0%
TCTAACAGTTCCAAACAGAA+TGG - chr6_3:94606913-94606932 None:intergenic 35.0%
!!! GAGCCGAACACTAATTTTTT+AGG + chr6_3:94607307-94607326 Msa0966410:intron 35.0%
!!! CCGAACACTAATTTTTTAGG+AGG + chr6_3:94607310-94607329 Msa0966410:intron 35.0%
TGAGGAAAGAAACAAAACCA+AGG - chr6_3:94607474-94607493 None:intergenic 35.0%
! GTAGCTTTGCTCAAATTTAC+TGG + chr6_3:94607504-94607523 Msa0966410:CDS 35.0%
! CAATATTTCTGATACTGGGA+AGG + chr6_3:94607542-94607561 Msa0966410:CDS 35.0%
! CTTTTGAATGCATGGATACT+TGG - chr6_3:94607704-94607723 None:intergenic 35.0%
CGAGGTTTCATAGTTAAGTA+AGG + chr6_3:94607877-94607896 Msa0966410:intron 35.0%
TTAAGTAAGGTAGACTCGAT+GGG + chr6_3:94607890-94607909 Msa0966410:intron 35.0%
GGGGAATAAAAAAGAGTTAG+CGG + chr6_3:94607910-94607929 Msa0966410:intron 35.0%
TAAAAAAGAGTTAGCGGTAG+AGG + chr6_3:94607916-94607935 Msa0966410:intron 35.0%
AAAAAAGAGTTAGCGGTAGA+GGG + chr6_3:94607917-94607936 Msa0966410:intron 35.0%
GTATAATGTATCAGGTGCAA+AGG - chr6_3:94608006-94608025 None:intergenic 35.0%
! CAATCTTTTCCCATTTGAAG+GGG - chr6_3:94608064-94608083 None:intergenic 35.0%
! CCAATCTTTTCCCATTTGAA+GGG - chr6_3:94608065-94608084 None:intergenic 35.0%
! ACCAATCTTTTCCCATTTGA+AGG - chr6_3:94608066-94608085 None:intergenic 35.0%
!! GAAAAGATTGGTCTCGTATA+AGG + chr6_3:94608074-94608093 Msa0966410:intron 35.0%
CAAGTAGGAAATCCTATCAA+AGG - chr6_3:94608210-94608229 None:intergenic 35.0%
AGATTCAGAATGATACCTGT+AGG - chr6_3:94608302-94608321 None:intergenic 35.0%
TACAGGTATCATTCTGAATC+TGG + chr6_3:94608301-94608320 Msa0966410:intron 35.0%
GAGATAATTGTCGAGCATTA+TGG + chr6_3:94608340-94608359 Msa0966410:CDS 35.0%
! TATACCGCTTTAGCAGTTTT+GGG - chr6_3:94608654-94608673 None:intergenic 35.0%
!! CAATTAGCAAATGATGGACA+AGG - chr6_3:94608827-94608846 None:intergenic 35.0%
! CTTGTCCATCATTTGCTAAT+TGG + chr6_3:94608825-94608844 Msa0966410:intron 35.0%
ACAAAAATGCACCACAAAGA+AGG - chr6_3:94608904-94608923 None:intergenic 35.0%
! ACTTTTTGCATCCTCTTCTT+CGG - chr6_3:94608977-94608996 None:intergenic 35.0%
AAGAAGAGGATGCAAAAAGT+TGG + chr6_3:94608977-94608996 Msa0966410:intron 35.0%
TCTCGAACATTGTAAACTAG+TGG - chr6_3:94609003-94609022 None:intergenic 35.0%
! ACTAGTTTACAATGTTCGAG+AGG + chr6_3:94609002-94609021 Msa0966410:intron 35.0%
CTAGTTTACAATGTTCGAGA+GGG + chr6_3:94609003-94609022 Msa0966410:intron 35.0%
TAGTTTACAATGTTCGAGAG+GGG + chr6_3:94609004-94609023 Msa0966410:intron 35.0%
GATTGTATCATTGTTGAGAG+GGG + chr6_3:94609222-94609241 Msa0966410:intron 35.0%
ATTGTATCATTGTTGAGAGG+GGG + chr6_3:94609223-94609242 Msa0966410:intron 35.0%
!! AAGAAGGTGCCATATATATG+TGG - chr6_3:94609276-94609295 None:intergenic 35.0%
CAAAGAGCTAACAAACAAGA+AGG - chr6_3:94609292-94609311 None:intergenic 35.0%
! CTTCTTGTTTGTTAGCTCTT+TGG + chr6_3:94609290-94609309 Msa0966410:intron 35.0%
GGTCATATCACATTCATTGT+GGG - chr6_3:94609410-94609429 None:intergenic 35.0%
!! CAAAACCGACTTGTATAGTA+AGG - chr6_3:94609462-94609481 None:intergenic 35.0%
!! TACTATACAAGTCGGTTTTG+TGG + chr6_3:94609462-94609481 Msa0966410:intron 35.0%
!! ACTATACAAGTCGGTTTTGT+GGG + chr6_3:94609463-94609482 Msa0966410:intron 35.0%
CCACCTATTATCAAACAACT+CGG + chr6_3:94609508-94609527 Msa0966410:intron 35.0%
! GATCCGAGTTGTTTGATAAT+AGG - chr6_3:94609514-94609533 None:intergenic 35.0%
TTTCAATATTGGACGTGAGA+AGG + chr6_3:94609545-94609564 Msa0966410:intron 35.0%
TTCAATATTGGACGTGAGAA+GGG + chr6_3:94609546-94609565 Msa0966410:intron 35.0%
ATATCTCTCATCTTACAAGC+CGG + chr6_3:94609632-94609651 Msa0966410:intron 35.0%
CTAATTCAACCTTCTAAACC+CGG - chr6_3:94609654-94609673 None:intergenic 35.0%
TTATGTTATCCTTTGACCTG+AGG + chr6_3:94609721-94609740 Msa0966410:intron 35.0%
!! GATATTAGATAATGGACCTC+AGG - chr6_3:94609740-94609759 None:intergenic 35.0%
! TCAGTGCCAATATCCTATTT+TGG + chr6_3:94609758-94609777 Msa0966410:intron 35.0%
ATGGAGTGGTACAAAGATTT+AGG - chr6_3:94609833-94609852 None:intergenic 35.0%
! ATTTTGTTACATGGTGGTCA+TGG - chr6_3:94609907-94609926 None:intergenic 35.0%
!!! GTTGCTATTTTGTTACATGG+TGG - chr6_3:94609913-94609932 None:intergenic 35.0%
AATAAAATGAAGCCTGCAGT+AGG + chr6_3:94609954-94609973 Msa0966410:intron 35.0%
GCTGCATCACAAAAACAATA+AGG - chr6_3:94610113-94610132 None:intergenic 35.0%
TGCATACAAGAATGAGGTTA+GGG - chr6_3:94610281-94610300 None:intergenic 35.0%
ATGCATACAAGAATGAGGTT+AGG - chr6_3:94610282-94610301 None:intergenic 35.0%
AACAGTTACAATTACACCGT+TGG - chr6_3:94610323-94610342 None:intergenic 35.0%
AGAACCAGTAAAATTCCTGT+GGG - chr6_3:94610399-94610418 None:intergenic 35.0%
TAGAACCAGTAAAATTCCTG+TGG - chr6_3:94610400-94610419 None:intergenic 35.0%
GGAGAGGAAGTTATTAGAGT+TGG - chr6_3:94602588-94602607 None:intergenic 40.0%
AGAAAAACAGTACCACTTGG+TGG + chr6_3:94602684-94602703 Msa0966410:CDS 40.0%
!! ATGGAAACTGGCTTGGTTTA+AGG + chr6_3:94602729-94602748 Msa0966410:intron 40.0%
!! TGGAAACTGGCTTGGTTTAA+GGG + chr6_3:94602730-94602749 Msa0966410:intron 40.0%
GGAAGATGATATGGTTGAAG+AGG + chr6_3:94602751-94602770 Msa0966410:intron 40.0%
! TAAGGGAAGCACAAGAAGAT+AGG + chr6_3:94602864-94602883 Msa0966410:CDS 40.0%
ACCATAGAAAATGGGAAGAC+TGG + chr6_3:94602897-94602916 Msa0966410:CDS 40.0%
!!! AAAATGGGAAGACTGGCTTT+TGG + chr6_3:94602904-94602923 Msa0966410:CDS 40.0%
GCAGTAGTTCTTCTTCTTCT+TGG + chr6_3:94602936-94602955 Msa0966410:CDS 40.0%
ACTATTAATAAGGGCCCGTT+TGG - chr6_3:94603399-94603418 None:intergenic 40.0%
ACTAGAAAATCCATTGCCCA+AGG - chr6_3:94603493-94603512 None:intergenic 40.0%
! GCTATCTAGCTTATAAGGTG+AGG - chr6_3:94603679-94603698 None:intergenic 40.0%
GTGCTTGGACACATATCAAT+TGG + chr6_3:94603724-94603743 Msa0966410:intron 40.0%
ATTTGAACCGCAGTAATCAG+TGG + chr6_3:94603748-94603767 Msa0966410:intron 40.0%
! TTTCAAGCCACTGATTACTG+CGG - chr6_3:94603758-94603777 None:intergenic 40.0%
AGTAATCAGTGGCTTGAAAG+TGG + chr6_3:94603759-94603778 Msa0966410:intron 40.0%
GTAATCAGTGGCTTGAAAGT+GGG + chr6_3:94603760-94603779 Msa0966410:intron 40.0%
!!! GTGGTGCTATGATAGGATTT+TGG + chr6_3:94603861-94603880 Msa0966410:intron 40.0%
TACTAGTCGATGTGGGATTT+GGG - chr6_3:94603900-94603919 None:intergenic 40.0%
ATACTAGTCGATGTGGGATT+TGG - chr6_3:94603901-94603920 None:intergenic 40.0%
! AAATCCCACATCGACTAGTA+TGG + chr6_3:94603900-94603919 Msa0966410:intron 40.0%
! AATCCCACATCGACTAGTAT+GGG + chr6_3:94603901-94603920 Msa0966410:intron 40.0%
! AATATTCAGAGCACTCTTGG+TGG - chr6_3:94604080-94604099 None:intergenic 40.0%
TGGTACAGTCTTCACATATC+TGG - chr6_3:94604367-94604386 None:intergenic 40.0%
TCTCTACCTCAAGCTCAAAT+CGG - chr6_3:94604464-94604483 None:intergenic 40.0%
TTTGAGCTTGAGGTAGAGAT+TGG + chr6_3:94604465-94604484 Msa0966410:CDS 40.0%
! TCCACCTCTTTCTGATAATG+AGG + chr6_3:94604494-94604513 Msa0966410:CDS 40.0%
ACCTCATTATCAGAAAGAGG+TGG - chr6_3:94604498-94604517 None:intergenic 40.0%
AAACTAACAAGTCCAGGACT+AGG - chr6_3:94605146-94605165 None:intergenic 40.0%
GATTAGAGTTGAGAGATGAG+TGG + chr6_3:94605277-94605296 Msa0966410:intron 40.0%
! GTAGAGCATTTGCCAACATA+TGG + chr6_3:94605313-94605332 Msa0966410:CDS 40.0%
AACTGTGTCAGACCATATGT+TGG - chr6_3:94605328-94605347 None:intergenic 40.0%
! TATGGTCTGACACAGTTTTC+GGG + chr6_3:94605331-94605350 Msa0966410:CDS 40.0%
GGGTGGCCAATTTCAAAATT+GGG + chr6_3:94605529-94605548 Msa0966410:intron 40.0%
CTTAGCATAGGAGATCTGTA+TGG - chr6_3:94605870-94605889 None:intergenic 40.0%
!!! ACAAACGCCATTTTTGCATC+TGG + chr6_3:94605969-94605988 Msa0966410:intron 40.0%
CTTCTCTCCAGATGCAAAAA+TGG - chr6_3:94605979-94605998 None:intergenic 40.0%
! CATTTTTGCATCTGGAGAGA+AGG + chr6_3:94605977-94605996 Msa0966410:intron 40.0%
!! TGAGTGTTCCTTTTAGCTAC+AGG + chr6_3:94606026-94606045 Msa0966410:intron 40.0%
!! TGTTCCTTTTAGCTACAGGT+CGG + chr6_3:94606030-94606049 Msa0966410:intron 40.0%
! AAACTTGTTCCTCTTCCTTC+TGG - chr6_3:94606131-94606150 None:intergenic 40.0%
AACAAGTTTCAGTGTACTGC+TGG + chr6_3:94606142-94606161 Msa0966410:intron 40.0%
!! GCAATGATTACTCTGGAGTT+TGG - chr6_3:94606171-94606190 None:intergenic 40.0%
GTGACATGCAATGATTACTC+TGG - chr6_3:94606178-94606197 None:intergenic 40.0%
AATGCTTCCTGGACATTCTT+AGG + chr6_3:94606213-94606232 Msa0966410:intron 40.0%
GCTGCTAAGTGTGTATTTCT+TGG - chr6_3:94606596-94606615 None:intergenic 40.0%
GCATTCAGTGAGTGTCATAT+TGG + chr6_3:94606704-94606723 Msa0966410:intron 40.0%
TTTCCAGGTTACTACTCTTC+TGG - chr6_3:94606822-94606841 None:intergenic 40.0%
GGTTACCTGTGAAACCAAAA+AGG + chr6_3:94606863-94606882 Msa0966410:intron 40.0%
AGAACAGTACCCATTCTGTT+TGG + chr6_3:94606900-94606919 Msa0966410:intron 40.0%
TTATCCCACTAAGTGGAGTT+GGG - chr6_3:94607247-94607266 None:intergenic 40.0%
TTTATCCCACTAAGTGGAGT+TGG - chr6_3:94607248-94607267 None:intergenic 40.0%
TTGGAAAAGGAAGTTACCCT+AGG - chr6_3:94607599-94607618 None:intergenic 40.0%
TGTGTCAGTACTACTAATCG+AGG + chr6_3:94607859-94607878 Msa0966410:intron 40.0%
GTTAAGTAAGGTAGACTCGA+TGG + chr6_3:94607889-94607908 Msa0966410:intron 40.0%
TAAGTAAGGTAGACTCGATG+GGG + chr6_3:94607891-94607910 Msa0966410:intron 40.0%
GGGAGGCTAAGAAAAACTAT+AGG + chr6_3:94607937-94607956 Msa0966410:intron 40.0%
CCCTTCAAATGGGAAAAGAT+TGG + chr6_3:94608062-94608081 Msa0966410:intron 40.0%
!! TGTTGTGTAAGTCTGGTTCT+AGG - chr6_3:94608119-94608138 None:intergenic 40.0%
AACCAGACTTACACAACATC+TGG + chr6_3:94608121-94608140 Msa0966410:intron 40.0%
AACCAGATGTTGTGTAAGTC+TGG - chr6_3:94608126-94608145 None:intergenic 40.0%
GGTATCATTCTGAATCTGGT+TGG + chr6_3:94608305-94608324 Msa0966410:intron 40.0%
! TTATGGGCTTGAAGTTGATC+AGG + chr6_3:94608357-94608376 Msa0966410:CDS 40.0%
TTGATGCATGCGTGAAACTT+TGG + chr6_3:94608419-94608438 Msa0966410:CDS 40.0%
TGATGCATGCGTGAAACTTT+GGG + chr6_3:94608420-94608439 Msa0966410:CDS 40.0%
ATCTCCCAAAACTGCTAAAG+CGG + chr6_3:94608647-94608666 Msa0966410:intron 40.0%
! CTATACCGCTTTAGCAGTTT+TGG - chr6_3:94608655-94608674 None:intergenic 40.0%
!! GTTTTAGTCTTTGCAGGTAG+CGG - chr6_3:94608685-94608704 None:intergenic 40.0%
!!! CAAGGTGTTTTAGTCTTTGC+AGG - chr6_3:94608691-94608710 None:intergenic 40.0%
AGTTTACAATGTTCGAGAGG+GGG + chr6_3:94609005-94609024 Msa0966410:intron 40.0%
! TCTCTCATAGCCTTGAGATA+TGG + chr6_3:94609168-94609187 Msa0966410:intron 40.0%
TTGTATCATTGTTGAGAGGG+GGG + chr6_3:94609224-94609243 Msa0966410:intron 40.0%
TCGGGTGTTCCACATATATA+TGG + chr6_3:94609264-94609283 Msa0966410:intron 40.0%
GGGTCATATCACATTCATTG+TGG - chr6_3:94609411-94609430 None:intergenic 40.0%
GCTTCCCTTACTATACAAGT+CGG + chr6_3:94609454-94609473 Msa0966410:intron 40.0%
GCATCCCTTACCATACAAAT+GGG + chr6_3:94609485-94609504 Msa0966410:intron 40.0%
TAATAGGTGGCCCATTTGTA+TGG - chr6_3:94609498-94609517 None:intergenic 40.0%
! CCGAGTTGTTTGATAATAGG+TGG - chr6_3:94609511-94609530 None:intergenic 40.0%
TATCTCTCATCTTACAAGCC+GGG + chr6_3:94609633-94609652 Msa0966410:intron 40.0%
GTTGCCTCATAACCTAGTTT+AGG + chr6_3:94609673-94609692 Msa0966410:intron 40.0%
AACAGTCTCTACGCTTACAA+GGG - chr6_3:94609870-94609889 None:intergenic 40.0%
AAACAGTCTCTACGCTTACA+AGG - chr6_3:94609871-94609890 None:intergenic 40.0%
TTTATTGAGGCTTGGCACAA+TGG - chr6_3:94609940-94609959 None:intergenic 40.0%
! GGCTTCATTTTATTGAGGCT+TGG - chr6_3:94609948-94609967 None:intergenic 40.0%
! CTGCAGGCTTCATTTTATTG+AGG - chr6_3:94609953-94609972 None:intergenic 40.0%
!! TCACTTTTGGGGATAATCGT+GGG - chr6_3:94610149-94610168 None:intergenic 40.0%
!! ATCACTTTTGGGGATAATCG+TGG - chr6_3:94610150-94610169 None:intergenic 40.0%
CAATTTCATGTCTGGCAAAG+TGG + chr6_3:94610205-94610224 Msa0966410:three_prime_UTR 40.0%
! GTGGATTCAACTGTTTGCTA+CGG + chr6_3:94610224-94610243 Msa0966410:three_prime_UTR 40.0%
! TTTGCTACGGCTTTATCAAC+TGG + chr6_3:94610237-94610256 Msa0966410:three_prime_UTR 40.0%
!! ACTGGTTCTATAGTACAAGG+CGG + chr6_3:94610410-94610429 Msa0966410:three_prime_UTR 40.0%
!! CAAGATGATGGAAACTGGCT+TGG + chr6_3:94602722-94602741 Msa0966410:CDS 45.0%
! GCCAGTCTTCCCATTTTCTA+TGG - chr6_3:94602901-94602920 None:intergenic 45.0%
TCTTCTTCTTCTTGGGAGAG+TGG + chr6_3:94602944-94602963 Msa0966410:CDS 45.0%
GATTATAGGGAGGAGTTACG+AGG + chr6_3:94602974-94602993 Msa0966410:CDS 45.0%
TAATAAGGGCCCGTTTGGAT+TGG - chr6_3:94603394-94603413 None:intergenic 45.0%
TTGAAAGTGGGTACCTATGG+AGG + chr6_3:94603772-94603791 Msa0966410:intron 45.0%
TGAAAGTGGGTACCTATGGA+GGG + chr6_3:94603773-94603792 Msa0966410:intron 45.0%
! CGTTTTACAATACAACCGCC+AGG + chr6_3:94603822-94603841 Msa0966410:intron 45.0%
CATCCCATACTAGTCGATGT+GGG - chr6_3:94603907-94603926 None:intergenic 45.0%
ATCGACTAGTATGGGATGCT+CGG + chr6_3:94603909-94603928 Msa0966410:intron 45.0%
! CTCTTGGTGGTCAATGACAT+AGG - chr6_3:94604067-94604086 None:intergenic 45.0%
TCTTCTCACGTCGAGCATTT+GGG - chr6_3:94604397-94604416 None:intergenic 45.0%
ATCTTCTCACGTCGAGCATT+TGG - chr6_3:94604398-94604417 None:intergenic 45.0%
!! GAAAAGCCGATTTGAGCTTG+AGG + chr6_3:94604455-94604474 Msa0966410:CDS 45.0%
!! ATGAGGTTTGGTGGGAATTG+CGG + chr6_3:94604511-94604530 Msa0966410:CDS 45.0%
AACACCTTGTGAACTGGTAG+AGG + chr6_3:94605098-94605117 Msa0966410:intron 45.0%
AAAGCCTCTACCAGTTCACA+AGG - chr6_3:94605105-94605124 None:intergenic 45.0%
TCACTCTATGTTGTCTGTCC+TGG + chr6_3:94605500-94605519 Msa0966410:intron 45.0%
ATGTTGTCTGTCCTGGATAG+CGG + chr6_3:94605507-94605526 Msa0966410:intron 45.0%
GGGGTGGCCAATTTCAAAAT+TGG + chr6_3:94605528-94605547 Msa0966410:intron 45.0%
AAAATTGGGATAGCAGGGTG+TGG + chr6_3:94605543-94605562 Msa0966410:intron 45.0%
AAATTGGGATAGCAGGGTGT+GGG + chr6_3:94605544-94605563 Msa0966410:intron 45.0%
AAACAAGGCCAAACTCCCTT+GGG + chr6_3:94605820-94605839 Msa0966410:intron 45.0%
!!! CTAGTGTTTTTTGCCCCCAA+GGG - chr6_3:94605838-94605857 None:intergenic 45.0%
!!! TCTAGTGTTTTTTGCCCCCA+AGG - chr6_3:94605839-94605858 None:intergenic 45.0%
TGGGGGCAAAAAACACTAGA+TGG + chr6_3:94605839-94605858 Msa0966410:intron 45.0%
AAGTCCGACCTGTAGCTAAA+AGG - chr6_3:94606037-94606056 None:intergenic 45.0%
AGAAAGCCCTGATGAACAAG+TGG - chr6_3:94606069-94606088 None:intergenic 45.0%
AAGCATTAGCTCATCCAGGA+CGG - chr6_3:94606200-94606219 None:intergenic 45.0%
CTCTGTTCCTAAGAATGTCC+AGG - chr6_3:94606223-94606242 None:intergenic 45.0%
! GTTACACGGCGATCTAAAGT+TGG - chr6_3:94606369-94606388 None:intergenic 45.0%
CACAGTTCCTCACAGTTACA+CGG - chr6_3:94606383-94606402 None:intergenic 45.0%
! CTACTCTTCTGGTGATGTTC+AGG - chr6_3:94606811-94606830 None:intergenic 45.0%
TCACCAGAAGAGTAGTAACC+TGG + chr6_3:94606816-94606835 Msa0966410:intron 45.0%
AGAGATTGAAACCTAGGGCT+AGG + chr6_3:94607087-94607106 Msa0966410:intron 45.0%
ACTAAGTGGAGTTGGGTACA+TGG - chr6_3:94607240-94607259 None:intergenic 45.0%
ATGTACCCAACTCCACTTAG+TGG + chr6_3:94607239-94607258 Msa0966410:intron 45.0%
TGTACCCAACTCCACTTAGT+GGG + chr6_3:94607240-94607259 Msa0966410:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG - chr6_3:94607254-94607273 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG + chr6_3:94607251-94607270 Msa0966410:intron 45.0%
TTTAGGAGGCTGCCTTACTA+CGG + chr6_3:94607324-94607343 Msa0966410:intron 45.0%
CTTACTACGGCAGATGACTT+GGG + chr6_3:94607337-94607356 Msa0966410:intron 45.0%
AAGTAGGCTACCCCTTCAAA+TGG + chr6_3:94608051-94608070 Msa0966410:intron 45.0%
AGTAGGCTACCCCTTCAAAT+GGG + chr6_3:94608052-94608071 Msa0966410:intron 45.0%
CCTCAATAATGTGGGAGACT+GGG - chr6_3:94608856-94608875 None:intergenic 45.0%
ACCTCAATAATGTGGGAGAC+TGG - chr6_3:94608857-94608876 None:intergenic 45.0%
!! CTAAATAGGCACCGAAGAAG+AGG + chr6_3:94608963-94608982 Msa0966410:intron 45.0%
CCGCAATTAAGGTGGTTAAG+GGG - chr6_3:94609083-94609102 None:intergenic 45.0%
CCCCTTAACCACCTTAATTG+CGG + chr6_3:94609080-94609099 Msa0966410:intron 45.0%
GCCGCAATTAAGGTGGTTAA+GGG - chr6_3:94609084-94609103 None:intergenic 45.0%
TGCCGCAATTAAGGTGGTTA+AGG - chr6_3:94609085-94609104 None:intergenic 45.0%
CACCTTAATTGCGGCACATA+GGG + chr6_3:94609089-94609108 Msa0966410:intron 45.0%
! GGTGTTGGATCCTACAATGA+AGG - chr6_3:94609118-94609137 None:intergenic 45.0%
AGGATCCAACACCATAGTGT+TGG + chr6_3:94609125-94609144 Msa0966410:intron 45.0%
TACAGCCAACACTATGGTGT+TGG - chr6_3:94609133-94609152 None:intergenic 45.0%
!! CACCATAGTGTTGGCTGTAA+AGG + chr6_3:94609134-94609153 Msa0966410:intron 45.0%
CTCCTTTACAGCCAACACTA+TGG - chr6_3:94609139-94609158 None:intergenic 45.0%
!! TAGTGTTGGCTGTAAAGGAG+TGG + chr6_3:94609139-94609158 Msa0966410:intron 45.0%
!! AGTGTTGGCTGTAAAGGAGT+GGG + chr6_3:94609140-94609159 Msa0966410:intron 45.0%
! GGAGGTTTTCTCGGTTTCTT+CGG + chr6_3:94609245-94609264 Msa0966410:intron 45.0%
! GAGGTTTTCTCGGTTTCTTC+GGG + chr6_3:94609246-94609265 Msa0966410:intron 45.0%
AGGCGCACAAAAAACAATCG+CGG - chr6_3:94609322-94609341 None:intergenic 45.0%
ATTCACGACGAATGAGTGCA+AGG - chr6_3:94609342-94609361 None:intergenic 45.0%
GGCATCCCTTACCATACAAA+TGG + chr6_3:94609484-94609503 Msa0966410:intron 45.0%
GTGGCCCATTTGTATGGTAA+GGG - chr6_3:94609492-94609511 None:intergenic 45.0%
TCTTACAAGCCGGGTTTAGA+AGG + chr6_3:94609642-94609661 Msa0966410:intron 45.0%
!! GATAATGGACCTCAGGTCAA+AGG - chr6_3:94609733-94609752 None:intergenic 45.0%
TGTGGCGTATAGTTATGGAG+TGG - chr6_3:94609847-94609866 None:intergenic 45.0%
! AAGGGTGTGGCGTATAGTTA+TGG - chr6_3:94609852-94609871 None:intergenic 45.0%
AAGCGTAGAGACTGTTTCCA+TGG + chr6_3:94609874-94609893 Msa0966410:intron 45.0%
! GTGGTCATGGATTATAGCCA+TGG - chr6_3:94609894-94609913 None:intergenic 45.0%
! CGAACCCACAGGAATTTTAC+TGG + chr6_3:94610392-94610411 Msa0966410:three_prime_UTR 45.0%
CTATAGTACAAGGCGGTTCA+AGG + chr6_3:94610417-94610436 Msa0966410:three_prime_UTR 45.0%
!! ATGGAGGGTGCTTCTTCATA+AGG + chr6_3:94610619-94610638 Msa0966410:three_prime_UTR 45.0%
!! TGGAGGGTGCTTCTTCATAA+GGG + chr6_3:94610620-94610639 Msa0966410:three_prime_UTR 45.0%
!! GATGTTGAGGATGATGGGAG+AGG - chr6_3:94602604-94602623 None:intergenic 50.0%
!!! ATGGGAAGACTGGCTTTTGG+AGG + chr6_3:94602907-94602926 Msa0966410:CDS 50.0%
GGAAGATGGCCAGTCTAATG+AGG + chr6_3:94603625-94603644 Msa0966410:intron 50.0%
GGGAGAGTTCATTGAGTGCT+TGG + chr6_3:94603709-94603728 Msa0966410:intron 50.0%
GGCTTGAAAGTGGGTACCTA+TGG + chr6_3:94603769-94603788 Msa0966410:intron 50.0%
GAAAGTGGGTACCTATGGAG+GGG + chr6_3:94603774-94603793 Msa0966410:intron 50.0%
AAAGTGGGTACCTATGGAGG+GGG + chr6_3:94603775-94603794 Msa0966410:intron 50.0%
!! CTAAGGGGTGGTGCTATGAT+AGG + chr6_3:94603854-94603873 Msa0966410:intron 50.0%
GCATCCCATACTAGTCGATG+TGG - chr6_3:94603908-94603927 None:intergenic 50.0%
GTTGAGAGATGAGTGGAGAC+TGG + chr6_3:94605284-94605303 Msa0966410:CDS 50.0%
TGTTGTCTGTCCTGGATAGC+GGG + chr6_3:94605508-94605527 Msa0966410:intron 50.0%
CAAACAAGGCCAAACTCCCT+TGG + chr6_3:94605819-94605838 Msa0966410:intron 50.0%
AACAAGGCCAAACTCCCTTG+GGG + chr6_3:94605821-94605840 Msa0966410:intron 50.0%
! TTTTTGCCCCCAAGGGAGTT+TGG - chr6_3:94605831-94605850 None:intergenic 50.0%
ATCATTGCATGTCACCGTCC+TGG + chr6_3:94606183-94606202 Msa0966410:intron 50.0%
!! CAGGAAGCATTAGCTCATCC+AGG - chr6_3:94606204-94606223 None:intergenic 50.0%
CTGGATGAGCTAATGCTTCC+TGG + chr6_3:94606202-94606221 Msa0966410:intron 50.0%
! CGATCTAAAGTTGGCCACCT+TGG - chr6_3:94606360-94606379 None:intergenic 50.0%
TAGATCGCCGTGTAACTGTG+AGG + chr6_3:94606373-94606392 Msa0966410:intron 50.0%
CGATGTGTAGATGGAGCGTA+AGG + chr6_3:94606542-94606561 Msa0966410:intron 50.0%
ATGGTGTATCAAGTGCCACG+AGG + chr6_3:94606664-94606683 Msa0966410:intron 50.0%
! AAAAGTGTGGTCCTAGCCCT+AGG - chr6_3:94607101-94607120 None:intergenic 50.0%
CCAAGTCATCTGCCGTAGTA+AGG - chr6_3:94607339-94607358 None:intergenic 50.0%
CCTTACTACGGCAGATGACT+TGG + chr6_3:94607336-94607355 Msa0966410:intron 50.0%
AAAGAGTTAGCGGTAGAGGG+AGG + chr6_3:94607920-94607939 Msa0966410:intron 50.0%
TTGCATATTGGGACGCCTAC+AGG + chr6_3:94608284-94608303 Msa0966410:intron 50.0%
ACGCATGCATCAACGATGAC+TGG - chr6_3:94608412-94608431 None:intergenic 50.0%
CCCAGTCTCCCACATTATTG+AGG + chr6_3:94608853-94608872 Msa0966410:intron 50.0%
GAGGGACTTGTCCACTTGAT+TGG + chr6_3:94609052-94609071 Msa0966410:intron 50.0%
GGACTTGTCCACTTGATTGG+TGG + chr6_3:94609055-94609074 Msa0966410:intron 50.0%
CCTATGTGCCGCAATTAAGG+TGG - chr6_3:94609091-94609110 None:intergenic 50.0%
CCACCTTAATTGCGGCACAT+AGG + chr6_3:94609088-94609107 Msa0966410:intron 50.0%
CTTAATTGCGGCACATAGGG+CGG + chr6_3:94609092-94609111 Msa0966410:intron 50.0%
TATCATTGTTGAGAGGGGGG+AGG + chr6_3:94609227-94609246 Msa0966410:intron 50.0%
GGTGGCCCATTTGTATGGTA+AGG - chr6_3:94609493-94609512 None:intergenic 50.0%
TCTCTACGCTTACAAGGGTG+TGG - chr6_3:94609865-94609884 None:intergenic 50.0%
!! CTTTTGGGGATAATCGTGGG+AGG - chr6_3:94610146-94610165 None:intergenic 50.0%
GTTCCACGAGTTTCAGCTAC+TGG + chr6_3:94610340-94610359 Msa0966410:three_prime_UTR 50.0%
GAACCAGTAGCTGAAACTCG+TGG - chr6_3:94610346-94610365 None:intergenic 50.0%
AAATTCCTGTGGGTTCGCAC+AGG - chr6_3:94610389-94610408 None:intergenic 50.0%
!! GGAGGGTGCTTCTTCATAAG+GGG + chr6_3:94610621-94610640 Msa0966410:three_prime_UTR 50.0%
AAGTGGGTACCTATGGAGGG+GGG + chr6_3:94603776-94603795 Msa0966410:intron 55.0%
CAATACAACCGCCAGGACGT+CGG + chr6_3:94603829-94603848 Msa0966410:intron 55.0%
GACTAGTATGGGATGCTCGG+TGG + chr6_3:94603912-94603931 Msa0966410:intron 55.0%
!! GGGAGGGTTCCAAAAGTGCT+TGG + chr6_3:94603980-94603999 Msa0966410:intron 55.0%
TCTCACGTCGAGCATTTGGG+CGG - chr6_3:94604394-94604413 None:intergenic 55.0%
GTTGTCTGTCCTGGATAGCG+GGG + chr6_3:94605509-94605528 Msa0966410:intron 55.0%
ACAAGGCCAAACTCCCTTGG+GGG + chr6_3:94605822-94605841 Msa0966410:intron 55.0%
! CAGTGTGTCGTTGTTCCTCG+TGG - chr6_3:94606682-94606701 None:intergenic 55.0%
CACGAGGAACAACGACACAC+TGG + chr6_3:94606680-94606699 Msa0966410:intron 55.0%
!! AAGGGGCACCACCAATCAAG+TGG - chr6_3:94609066-94609085 None:intergenic 55.0%
CGCCCTATGTGCCGCAATTA+AGG - chr6_3:94609094-94609113 None:intergenic 55.0%
CATAGGGCGGCCTTCATTGT+AGG + chr6_3:94609105-94609124 Msa0966410:intron 55.0%
! TGAGAGGGGGGAGGTTTTCT+CGG + chr6_3:94609236-94609255 Msa0966410:intron 55.0%
TGAGGCTTGGCACAATGGCA+AGG - chr6_3:94609935-94609954 None:intergenic 55.0%
TAGGGAGGAGTTACGAGGCG+AGG + chr6_3:94602979-94602998 Msa0966410:CDS 60.0%
TCGAGCATTTGGGCGGCTAG+TGG - chr6_3:94604387-94604406 None:intergenic 60.0%
AATTGGCCACCCCGCTATCC+AGG - chr6_3:94605521-94605540 None:intergenic 60.0%
ACCTATGGAGGGGGGCTGAC+TGG + chr6_3:94603784-94603803 Msa0966410:intron 65.0%
TCCAGTCAGCCCCCCTCCAT+AGG - chr6_3:94603788-94603807 None:intergenic 65.0%
TGGAGGGGGGCTGACTGGAA+AGG + chr6_3:94603789-94603808 Msa0966410:intron 65.0%
CCTTAGAGCCGACGTCCTGG+CGG - chr6_3:94603840-94603859 None:intergenic 65.0%
!! CGCCAGGACGTCGGCTCTAA+GGG + chr6_3:94603838-94603857 Msa0966410:intron 65.0%
!! GCCAGGACGTCGGCTCTAAG+GGG + chr6_3:94603839-94603858 Msa0966410:intron 65.0%
ACCCCTTAGAGCCGACGTCC+TGG - chr6_3:94603843-94603862 None:intergenic 65.0%
!! AGGACGTCGGCTCTAAGGGG+TGG + chr6_3:94603842-94603861 Msa0966410:intron 65.0%
!! GTCTGTCCTGGATAGCGGGG+TGG + chr6_3:94605512-94605531 Msa0966410:intron 65.0%
GCAGACCTGTGCGAACCCAC+AGG + chr6_3:94610381-94610400 Msa0966410:three_prime_UTR 65.0%
!! CCGCCAGGACGTCGGCTCTA+AGG + chr6_3:94603837-94603856 Msa0966410:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 94602503 94610657 94602503 ID=Msa0966410;Name=Msa0966410
chr6_3 mRNA 94602503 94610657 94602503 ID=Msa0966410-mRNA-1;Parent=Msa0966410;Name=Msa0966410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.71|0.75|1|0.71|0.5|8|457|423
chr6_3 exon 94602503 94602743 94602503 ID=Msa0966410-mRNA-1:exon:17487;Parent=Msa0966410-mRNA-1
chr6_3 exon 94602756 94603108 94602756 ID=Msa0966410-mRNA-1:exon:17488;Parent=Msa0966410-mRNA-1
chr6_3 exon 94603460 94603545 94603460 ID=Msa0966410-mRNA-1:exon:17489;Parent=Msa0966410-mRNA-1
chr6_3 exon 94604368 94604541 94604368 ID=Msa0966410-mRNA-1:exon:17490;Parent=Msa0966410-mRNA-1
chr6_3 exon 94605278 94605392 94605278 ID=Msa0966410-mRNA-1:exon:17491;Parent=Msa0966410-mRNA-1
chr6_3 exon 94607504 94607601 94607504 ID=Msa0966410-mRNA-1:exon:17492;Parent=Msa0966410-mRNA-1
chr6_3 exon 94608306 94608441 94608306 ID=Msa0966410-mRNA-1:exon:17493;Parent=Msa0966410-mRNA-1
chr6_3 exon 94610132 94610657 94610132 ID=Msa0966410-mRNA-1:exon:17494;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94602503 94602743 94602503 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94602756 94603108 94602756 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94603460 94603545 94603460 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94604368 94604541 94604368 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94605278 94605392 94605278 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94607504 94607601 94607504 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94608306 94608441 94608306 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 CDS 94610132 94610200 94610132 ID=Msa0966410-mRNA-1:cds;Parent=Msa0966410-mRNA-1
chr6_3 three_prime_UTR 94610201 94610657 94610201 ID=Msa0966410-mRNA-1:three_prime_utr;Parent=Msa0966410-mRNA-1
Gene Sequence

>Msa0966410

ATGAGCTCATCAATTCTATTATCATCATCCAACAATTTCATCTTATTTAAACAACACCACAAACTTGTATTATCATCATCATCCAACTCTAATAACTTCCTCTCCCATCATCCTCAACATCTTTCATTTCAAAACCAACGTTTTACTACCTTCATTTCAAAAGCCAAAAACCATAAAAACAAGAAAAACAGTACCACTTGGTGGCAGAAATTTTTTCAACAAGATGATGGAAACTGGCTTGATGATATGGTTGAAGAGGATGTTGAATTTGAAGTGGAAGAAGAACAAGAATTGTCTGAAGAAGAAAAGTTCGAAGCATGGAAGCAAAGAGCAGAAGCTATTATAGATATAAGGGAAGCACAAGAAGATAGGAAGAATCAAGACCATAGAAAATGGGAAGACTGGCTTTTGGAGGATGACAGCAGTAGTTCTTCTTCTTCTTGGGAGAGTGGAATAAAAGATTATAGGGAGGAGTTACGAGGCGAGGATGATGATTTCAACGAAAATAACGGGGTTGTACAGTCTGTTAAGTATTTGATTTTTGGAAGAGAAGATGGTGGTGATAATGATGATGATATGCTTTATGAAGACCGTGCTAAATTTTTGGGAGTGTTGATTATTATACCTTGGGCAATGGATTTTCTAGTTCATGACTATGTACTCATGCCTTTTTTAGACAGATATGTGAAGACTGTACCACTAGCCGCCCAAATGCTCGACGTGAGAAGATATCAAAAACTTCAAATGATTGAGGAATTAAAAACTGAGAAAAGCCGATTTGAGCTTGAGGTAGAGATTGGTAAATCTCCACCTCTTTCTGATAATGAGGTTTGGTGGGAATTGCGGAATAAAGCATTAGAGTTGAGAGATGAGTGGAGACTGGAGAATCGTAGAGCATTTGCCAACATATGGTCTGACACAGTTTTCGGGATCTCTTTATTTATTCTTTTGTACTTCAATAAGAGTAAAGTAGCTTTGCTCAAATTTACTGGTTATAAAATAATAAACAATATTTCTGATACTGGGAAGGCGTTTCTTATTATACTTATCACAGATATTTTCCTAGGGTATCATTCTGAATCTGGTTGGCAAACTCTGATAGAGATAATTGTCGAGCATTATGGGCTTGAAGTTGATCAGGCCGCCATTACTATTTTTGTTTGCTTTGTACCAGTCATCGTTGATGCATGCGTGAAACTTTGGCTGTTCAAATTCCTCCCACGATTATCCCCAAAAGTGATGAGTATATTTCAAGAAATGAAGCGTCACTAG

Protein sequence

>Msa0966410

MSSSILLSSSNNFILFKQHHKLVLSSSSNSNNFLSHHPQHLSFQNQRFTTFISKAKNHKNKKNSTTWWQKFFQQDDGNWLDDMVEEDVEFEVEEEQELSEEEKFEAWKQRAEAIIDIREAQEDRKNQDHRKWEDWLLEDDSSSSSSSWESGIKDYREELRGEDDDFNENNGVVQSVKYLIFGREDGGDNDDDMLYEDRAKFLGVLIIIPWAMDFLVHDYVLMPFLDRYVKTVPLAAQMLDVRRYQKLQMIEELKTEKSRFELEVEIGKSPPLSDNEVWWELRNKALELRDEWRLENRRAFANIWSDTVFGISLFILLYFNKSKVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWQTLIEIIVEHYGLEVDQAAITIFVCFVPVIVDACVKLWLFKFLPRLSPKVMSIFQEMKRH*