Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525280 | XP_013461885.1 | 97.857 | 140 | 3 | 0 | 1 | 140 | 1 | 140 | 3.76e-95 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525280 | sp|Q9SN73|BSD2_ARATH | 69.136 | 81 | 25 | 0 | 60 | 140 | 56 | 136 | 3.38e-36 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525280 | A0A072VCQ1 | 97.857 | 140 | 3 | 0 | 1 | 140 | 1 | 140 | 1.80e-95 | 280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0525280 | 0.811719 | 6.083825e-51 | -8.615850e-47 |
| Msa0006050 | Msa0525280 | 0.841244 | 5.345837e-58 | -8.615850e-47 |
| Msa0012380 | Msa0525280 | 0.848646 | 5.369247e-60 | -8.615850e-47 |
| Msa0012820 | Msa0525280 | -0.800529 | 1.381237e-48 | -8.615850e-47 |
| Msa0014410 | Msa0525280 | 0.860539 | 1.925001e-63 | -8.615850e-47 |
| Msa0020630 | Msa0525280 | 0.831116 | 2.002924e-55 | -8.615850e-47 |
| Msa0026110 | Msa0525280 | 0.810361 | 1.197702e-50 | -8.615850e-47 |
| Msa0037820 | Msa0525280 | 0.812523 | 4.061026e-51 | -8.615850e-47 |
| Msa0040550 | Msa0525280 | -0.818019 | 2.438002e-52 | -8.615850e-47 |
| Msa0043680 | Msa0525280 | 0.807729 | 4.383476e-50 | -8.615850e-47 |
| Msa0043940 | Msa0525280 | 0.860211 | 2.419758e-63 | -8.615850e-47 |
| Msa0044180 | Msa0525280 | 0.839575 | 1.459765e-57 | -8.615850e-47 |
| Msa0050720 | Msa0525280 | 0.804564 | 2.033284e-49 | -8.615850e-47 |
| Msa0050770 | Msa0525280 | 0.807225 | 5.609077e-50 | -8.615850e-47 |
| Msa0054760 | Msa0525280 | 0.804957 | 1.683319e-49 | -8.615850e-47 |
| Msa0057530 | Msa0525280 | 0.833795 | 4.343352e-56 | -8.615850e-47 |
| Msa0061320 | Msa0525280 | 0.802546 | 5.330858e-49 | -8.615850e-47 |
| Msa0061600 | Msa0525280 | -0.808598 | 2.862405e-50 | -8.615850e-47 |
| Msa0064550 | Msa0525280 | 0.883210 | 5.440092e-71 | -8.615850e-47 |
| Msa0068410 | Msa0525280 | 0.820892 | 5.394346e-53 | -8.615850e-47 |
| Msa0072830 | Msa0525280 | 0.803283 | 3.752678e-49 | -8.615850e-47 |
| Msa0072860 | Msa0525280 | 0.803598 | 3.229581e-49 | -8.615850e-47 |
| Msa0076720 | Msa0525280 | 0.821355 | 4.219801e-53 | -8.615850e-47 |
| Msa0084630 | Msa0525280 | 0.832197 | 1.084532e-55 | -8.615850e-47 |
| Msa0084680 | Msa0525280 | 0.827472 | 1.535526e-54 | -8.615850e-47 |
| Msa0089510 | Msa0525280 | 0.839308 | 1.713086e-57 | -8.615850e-47 |
| Msa0089520 | Msa0525280 | 0.839219 | 1.806437e-57 | -8.615850e-47 |
| Msa0090860 | Msa0525280 | 0.846496 | 2.093688e-59 | -8.615850e-47 |
| Msa0091480 | Msa0525280 | 0.802492 | 5.467216e-49 | -8.615850e-47 |
| Msa0092660 | Msa0525280 | 0.816402 | 5.632533e-52 | -8.615850e-47 |
| Msa0092710 | Msa0525280 | 0.851622 | 7.872780e-61 | -8.615850e-47 |
| Msa0092730 | Msa0525280 | 0.815741 | 7.915591e-52 | -8.615850e-47 |
| Msa0094670 | Msa0525280 | 0.802366 | 5.805737e-49 | -8.615850e-47 |
| Msa0101170 | Msa0525280 | -0.805848 | 1.094911e-49 | -8.615850e-47 |
| Msa0103160 | Msa0525280 | 0.843285 | 1.539019e-58 | -8.615850e-47 |
| Msa0106130 | Msa0525280 | -0.804556 | 2.041360e-49 | -8.615850e-47 |
| Msa0108070 | Msa0525280 | 0.869299 | 3.436692e-66 | -8.615850e-47 |
| Msa0109490 | Msa0525280 | 0.862588 | 4.556222e-64 | -8.615850e-47 |
| Msa0114240 | Msa0525280 | 0.828684 | 7.840531e-55 | -8.615850e-47 |
| Msa0121800 | Msa0525280 | 0.803354 | 3.628725e-49 | -8.615850e-47 |
| Msa0124660 | Msa0525280 | 0.838801 | 2.317041e-57 | -8.615850e-47 |
| Msa0130800 | Msa0525280 | 0.813092 | 3.048164e-51 | -8.615850e-47 |
| Msa0137600 | Msa0525280 | 0.813288 | 2.760684e-51 | -8.615850e-47 |
| Msa0140290 | Msa0525280 | 0.879286 | 1.410620e-69 | -8.615850e-47 |
| Msa0154200 | Msa0525280 | 0.800790 | 1.221427e-48 | -8.615850e-47 |
| Msa0154220 | Msa0525280 | 0.875840 | 2.243818e-68 | -8.615850e-47 |
| Msa0154240 | Msa0525280 | 0.882203 | 1.268629e-70 | -8.615850e-47 |
| Msa0154270 | Msa0525280 | 0.910780 | 1.276214e-82 | -8.615850e-47 |
| Msa0155610 | Msa0525280 | 0.860102 | 2.609638e-63 | -8.615850e-47 |
| Msa0157350 | Msa0525280 | 0.806753 | 7.058638e-50 | -8.615850e-47 |
| Msa0159750 | Msa0525280 | 0.836037 | 1.183203e-56 | -8.615850e-47 |
| Msa0166570 | Msa0525280 | 0.830067 | 3.617325e-55 | -8.615850e-47 |
| Msa0171920 | Msa0525280 | 0.862707 | 4.187715e-64 | -8.615850e-47 |
| Msa0176710 | Msa0525280 | 0.807984 | 3.869211e-50 | -8.615850e-47 |
| Msa0178940 | Msa0525280 | 0.855964 | 4.430481e-62 | -8.615850e-47 |
| Msa0182640 | Msa0525280 | 0.828295 | 9.732130e-55 | -8.615850e-47 |
| Msa0183560 | Msa0525280 | 0.849489 | 3.129475e-60 | -8.615850e-47 |
| Msa0185340 | Msa0525280 | -0.806009 | 1.012593e-49 | -8.615850e-47 |
| Msa0187980 | Msa0525280 | 0.806611 | 7.562085e-50 | -8.615850e-47 |
| Msa0197030 | Msa0525280 | 0.899342 | 2.179231e-77 | -8.615850e-47 |
| Msa0199740 | Msa0525280 | 0.863985 | 1.682888e-64 | -8.615850e-47 |
| Msa0212730 | Msa0525280 | 0.820749 | 5.819952e-53 | -8.615850e-47 |
| Msa0216210 | Msa0525280 | 0.850808 | 1.336121e-60 | -8.615850e-47 |
| Msa0217470 | Msa0525280 | 0.802084 | 6.633451e-49 | -8.615850e-47 |
| Msa0218530 | Msa0525280 | -0.828816 | 7.282750e-55 | -8.615850e-47 |
| Msa0218650 | Msa0525280 | -0.838007 | 3.712372e-57 | -8.615850e-47 |
| Msa0224370 | Msa0525280 | 0.827261 | 1.724853e-54 | -8.615850e-47 |
| Msa0224400 | Msa0525280 | 0.830356 | 3.075576e-55 | -8.615850e-47 |
| Msa0377280 | Msa0525280 | 0.823990 | 1.028351e-53 | -8.615850e-47 |
| Msa0380520 | Msa0525280 | 0.818561 | 1.837936e-52 | -8.615850e-47 |
| Msa0380650 | Msa0525280 | 0.860872 | 1.525919e-63 | -8.615850e-47 |
| Msa0382500 | Msa0525280 | 0.811454 | 6.944731e-51 | -8.615850e-47 |
| Msa0382590 | Msa0525280 | 0.951176 | 3.540422e-109 | -8.615850e-47 |
| Msa0387790 | Msa0525280 | 0.809181 | 2.148019e-50 | -8.615850e-47 |
| Msa0387970 | Msa0525280 | 0.880725 | 4.331534e-70 | -8.615850e-47 |
| Msa0389060 | Msa0525280 | 0.823967 | 1.041101e-53 | -8.615850e-47 |
| Msa0392050 | Msa0525280 | 0.927891 | 6.239696e-92 | -8.615850e-47 |
| Msa0392540 | Msa0525280 | 0.879794 | 9.314154e-70 | -8.615850e-47 |
| Msa0393880 | Msa0525280 | 0.800129 | 1.665632e-48 | -8.615850e-47 |
| Msa0401340 | Msa0525280 | 0.900937 | 4.441508e-78 | -8.615850e-47 |
| Msa0404060 | Msa0525280 | 0.804119 | 2.517777e-49 | -8.615850e-47 |
| Msa0404070 | Msa0525280 | 0.826681 | 2.374144e-54 | -8.615850e-47 |
| Msa0404690 | Msa0525280 | 0.824234 | 9.012326e-54 | -8.615850e-47 |
| Msa0411560 | Msa0525280 | 0.802311 | 5.959789e-49 | -8.615850e-47 |
| Msa0416540 | Msa0525280 | 0.822260 | 2.605742e-53 | -8.615850e-47 |
| Msa0421720 | Msa0525280 | 0.805748 | 1.149069e-49 | -8.615850e-47 |
| Msa0430020 | Msa0525280 | 0.818286 | 2.121590e-52 | -8.615850e-47 |
| Msa0430290 | Msa0525280 | 0.862680 | 4.269153e-64 | -8.615850e-47 |
| Msa0432680 | Msa0525280 | 0.802768 | 4.795227e-49 | -8.615850e-47 |
| Msa0432720 | Msa0525280 | 0.971085 | 1.301895e-132 | -8.615850e-47 |
| Msa0435010 | Msa0525280 | 0.808431 | 3.107520e-50 | -8.615850e-47 |
| Msa0437550 | Msa0525280 | 0.835084 | 2.061476e-56 | -8.615850e-47 |
| Msa0437790 | Msa0525280 | 0.805279 | 1.441438e-49 | -8.615850e-47 |
| Msa0440310 | Msa0525280 | 0.875895 | 2.147181e-68 | -8.615850e-47 |
| Msa0448080 | Msa0525280 | 0.820735 | 5.862288e-53 | -8.615850e-47 |
| Msa0448120 | Msa0525280 | 0.888438 | 5.902656e-73 | -8.615850e-47 |
| Msa0462590 | Msa0525280 | 0.804225 | 2.392909e-49 | -8.615850e-47 |
| Msa0463150 | Msa0525280 | 0.818567 | 1.832918e-52 | -8.615850e-47 |
| Msa0469950 | Msa0525280 | 0.927688 | 8.288991e-92 | -8.615850e-47 |
| Msa0472270 | Msa0525280 | 0.800280 | 1.551979e-48 | -8.615850e-47 |
| Msa0472740 | Msa0525280 | 0.806109 | 9.648009e-50 | -8.615850e-47 |
| Msa0479100 | Msa0525280 | 0.816104 | 6.568987e-52 | -8.615850e-47 |
| Msa0481490 | Msa0525280 | 0.860770 | 1.637821e-63 | -8.615850e-47 |
| Msa0238860 | Msa0525280 | 0.880723 | 4.341183e-70 | -8.615850e-47 |
| Msa0240640 | Msa0525280 | 0.840298 | 9.458716e-58 | -8.615850e-47 |
| Msa0242290 | Msa0525280 | 0.875103 | 4.011925e-68 | -8.615850e-47 |
| Msa0253160 | Msa0525280 | 0.868347 | 6.985615e-66 | -8.615850e-47 |
| Msa0260190 | Msa0525280 | 0.880039 | 7.617119e-70 | -8.615850e-47 |
| Msa0265580 | Msa0525280 | 0.870701 | 1.195703e-66 | -8.615850e-47 |
| Msa0276590 | Msa0525280 | 0.886584 | 3.012261e-72 | -8.615850e-47 |
| Msa0280140 | Msa0525280 | 0.801058 | 1.076940e-48 | -8.615850e-47 |
| Msa0280500 | Msa0525280 | 0.859140 | 5.080997e-63 | -8.615850e-47 |
| Msa0291940 | Msa0525280 | 0.860349 | 2.198390e-63 | -8.615850e-47 |
| Msa0295570 | Msa0525280 | 0.869318 | 3.387086e-66 | -8.615850e-47 |
| Msa0296000 | Msa0525280 | 0.842774 | 2.105893e-58 | -8.615850e-47 |
| Msa0297370 | Msa0525280 | -0.817460 | 3.260166e-52 | -8.615850e-47 |
| Msa0303440 | Msa0525280 | 0.876895 | 9.699678e-69 | -8.615850e-47 |
| Msa0303500 | Msa0525280 | 0.862817 | 3.874504e-64 | -8.615850e-47 |
| Msa0307550 | Msa0525280 | 0.802899 | 4.505761e-49 | -8.615850e-47 |
| Msa0308570 | Msa0525280 | 0.812507 | 4.093918e-51 | -8.615850e-47 |
| Msa0312580 | Msa0525280 | -0.804405 | 2.195125e-49 | -8.615850e-47 |
| Msa0316610 | Msa0525280 | 0.858004 | 1.108874e-62 | -8.615850e-47 |
| Msa0318070 | Msa0525280 | 0.802559 | 5.296072e-49 | -8.615850e-47 |
| Msa0318270 | Msa0525280 | 0.807288 | 5.437801e-50 | -8.615850e-47 |
| Msa0318310 | Msa0525280 | 0.801109 | 1.051465e-48 | -8.615850e-47 |
| Msa0319710 | Msa0525280 | 0.805933 | 1.050659e-49 | -8.615850e-47 |
| Msa0319970 | Msa0525280 | 0.810328 | 1.217322e-50 | -8.615850e-47 |
| Msa0323990 | Msa0525280 | 0.801942 | 7.097724e-49 | -8.615850e-47 |
| Msa0333900 | Msa0525280 | 0.844942 | 5.531658e-59 | -8.615850e-47 |
| Msa0334020 | Msa0525280 | 0.844801 | 6.036883e-59 | -8.615850e-47 |
| Msa0334980 | Msa0525280 | 0.821081 | 4.879527e-53 | -8.615850e-47 |
| Msa0344680 | Msa0525280 | 0.925925 | 9.457235e-91 | -8.615850e-47 |
| Msa0346790 | Msa0525280 | 0.868384 | 6.798620e-66 | -8.615850e-47 |
| Msa0353040 | Msa0525280 | -0.802128 | 6.498809e-49 | -8.615850e-47 |
| Msa0354390 | Msa0525280 | 0.869346 | 3.316681e-66 | -8.615850e-47 |
| Msa0358290 | Msa0525280 | 0.821627 | 3.651977e-53 | -8.615850e-47 |
| Msa0486530 | Msa0525280 | 0.813247 | 2.818688e-51 | -8.615850e-47 |
| Msa0487490 | Msa0525280 | 0.866343 | 3.055960e-65 | -8.615850e-47 |
| Msa0512310 | Msa0525280 | 0.813554 | 2.413340e-51 | -8.615850e-47 |
| Msa0524960 | Msa0525280 | 0.806247 | 9.023940e-50 | -8.615850e-47 |
| Msa0525270 | Msa0525280 | 0.986075 | 1.364225e-165 | -8.615850e-47 |
| Msa0525280 | Msa0530340 | 0.896426 | 3.730533e-76 | -8.615850e-47 |
| Msa0525280 | Msa0530930 | 0.807183 | 5.725812e-50 | -8.615850e-47 |
| Msa0525280 | Msa0530950 | 0.838373 | 2.989473e-57 | -8.615850e-47 |
| Msa0525280 | Msa0532840 | 0.812925 | 3.316325e-51 | -8.615850e-47 |
| Msa0525280 | Msa0533010 | 0.812462 | 4.188741e-51 | -8.615850e-47 |
| Msa0525280 | Msa0545230 | 0.857605 | 1.456702e-62 | -8.615850e-47 |
| Msa0525280 | Msa0546080 | 0.863084 | 3.203842e-64 | -8.615850e-47 |
| Msa0525280 | Msa0546740 | 0.806683 | 7.301834e-50 | -8.615850e-47 |
| Msa0525280 | Msa0548210 | 0.874959 | 4.491097e-68 | -8.615850e-47 |
| Msa0525280 | Msa0549540 | 0.909318 | 6.502718e-82 | -8.615850e-47 |
| Msa0525280 | Msa0549760 | 0.892479 | 1.528149e-74 | -8.615850e-47 |
| Msa0525280 | Msa0556070 | 0.841680 | 4.101708e-58 | -8.615850e-47 |
| Msa0525280 | Msa0557490 | 0.831855 | 1.317163e-55 | -8.615850e-47 |
| Msa0525280 | Msa0568610 | 0.840321 | 9.331047e-58 | -8.615850e-47 |
| Msa0525280 | Msa0569930 | 0.813325 | 2.709691e-51 | -8.615850e-47 |
| Msa0525280 | Msa0577050 | 0.805655 | 1.201803e-49 | -8.615850e-47 |
| Msa0525280 | Msa0577230 | 0.808460 | 3.064157e-50 | -8.615850e-47 |
| Msa0525280 | Msa0583740 | 0.876463 | 1.369032e-68 | -8.615850e-47 |
| Msa0525280 | Msa0584280 | 0.864520 | 1.145877e-64 | -8.615850e-47 |
| Msa0525280 | Msa0587900 | 0.828807 | 7.321475e-55 | -8.615850e-47 |
| Msa0525280 | Msa0589290 | 0.811696 | 6.153185e-51 | -8.615850e-47 |
| Msa0525280 | Msa0593810 | 0.802264 | 6.093198e-49 | -8.615850e-47 |
| Msa0525280 | Msa0600820 | 0.841818 | 3.772046e-58 | -8.615850e-47 |
| Msa0525280 | Msa0604700 | 0.812363 | 4.402692e-51 | -8.615850e-47 |
| Msa0525280 | Msa0604880 | 0.888239 | 7.041451e-73 | -8.615850e-47 |
| Msa0525280 | Msa0605250 | 0.894888 | 1.612981e-75 | -8.615850e-47 |
| Msa0525280 | Msa0605620 | 0.801574 | 8.442543e-49 | -8.615850e-47 |
| Msa0525280 | Msa0609790 | 0.909766 | 3.961565e-82 | -8.615850e-47 |
| Msa0525280 | Msa0618520 | 0.848216 | 7.057613e-60 | -8.615850e-47 |
| Msa0525280 | Msa0622250 | 0.886341 | 3.720427e-72 | -8.615850e-47 |
| Msa0525280 | Msa0627050 | 0.905966 | 2.454649e-80 | -8.615850e-47 |
| Msa0525280 | Msa0628100 | 0.829046 | 6.408993e-55 | -8.615850e-47 |
| Msa0525280 | Msa0629500 | 0.804028 | 2.628997e-49 | -8.615850e-47 |
| Msa0525280 | Msa0636720 | 0.905234 | 5.322304e-80 | -8.615850e-47 |
| Msa0525280 | Msa0644630 | 0.850082 | 2.136921e-60 | -8.615850e-47 |
| Msa0525280 | Msa0645820 | 0.811799 | 5.843778e-51 | -8.615850e-47 |
| Msa0525280 | Msa0646190 | 0.910804 | 1.243064e-82 | -8.615850e-47 |
| Msa0525280 | Msa0646340 | 0.844600 | 6.837393e-59 | -8.615850e-47 |
| Msa0525280 | Msa0649310 | 0.867311 | 1.502296e-65 | -8.615850e-47 |
| Msa0525280 | Msa0650640 | 0.800553 | 1.365260e-48 | -8.615850e-47 |
| Msa0525280 | Msa0651400 | 0.811534 | 6.673775e-51 | -8.615850e-47 |
| Msa0525280 | Msa0660070 | 0.808760 | 2.643017e-50 | -8.615850e-47 |
| Msa0525280 | Msa0665790 | 0.808135 | 3.593076e-50 | -8.615850e-47 |
| Msa0525280 | Msa0667970 | 0.830984 | 2.158188e-55 | -8.615850e-47 |
| Msa0525280 | Msa0675010 | 0.845835 | 3.170326e-59 | -8.615850e-47 |
| Msa0525280 | Msa0676100 | 0.833328 | 5.679655e-56 | -8.615850e-47 |
| Msa0525280 | Msa0679780 | 0.830659 | 2.593029e-55 | -8.615850e-47 |
| Msa0525280 | Msa0681210 | 0.871019 | 9.401287e-67 | -8.615850e-47 |
| Msa0525280 | Msa0685540 | 0.807551 | 4.783525e-50 | -8.615850e-47 |
| Msa0525280 | Msa0685890 | 0.869282 | 3.478993e-66 | -8.615850e-47 |
| Msa0525280 | Msa0688110 | 0.808585 | 2.881352e-50 | -8.615850e-47 |
| Msa0525280 | Msa0692420 | 0.846150 | 2.602860e-59 | -8.615850e-47 |
| Msa0525280 | Msa0693400 | 0.841369 | 4.955479e-58 | -8.615850e-47 |
| Msa0525280 | Msa0704220 | 0.869422 | 3.133796e-66 | -8.615850e-47 |
| Msa0525280 | Msa0705810 | 0.805279 | 1.440976e-49 | -8.615850e-47 |
| Msa0525280 | Msa0715510 | -0.800273 | 1.557073e-48 | -8.615850e-47 |
| Msa0525280 | Msa0729550 | 0.859134 | 5.104413e-63 | -8.615850e-47 |
| Msa0525280 | Msa0734240 | 0.815154 | 1.068879e-51 | -8.615850e-47 |
| Msa0525280 | Msa0738870 | 0.800124 | 1.669678e-48 | -8.615850e-47 |
| Msa0525280 | Msa0738880 | 0.864945 | 8.439409e-65 | -8.615850e-47 |
| Msa0525280 | Msa0740210 | 0.842248 | 2.903923e-58 | -8.615850e-47 |
| Msa0525280 | Msa0742090 | 0.821016 | 5.052706e-53 | -8.615850e-47 |
| Msa0525280 | Msa0742160 | 0.818425 | 1.973618e-52 | -8.615850e-47 |
| Msa0525280 | Msa0748330 | 0.883218 | 5.401706e-71 | -8.615850e-47 |
| Msa0525280 | Msa0760890 | 0.811120 | 8.205612e-51 | -8.615850e-47 |
| Msa0525280 | Msa0769830 | 0.878902 | 1.927293e-69 | -8.615850e-47 |
| Msa0525280 | Msa0775650 | 0.816742 | 4.727706e-52 | -8.615850e-47 |
| Msa0525280 | Msa0780140 | 0.821086 | 4.866522e-53 | -8.615850e-47 |
| Msa0525280 | Msa0781390 | 0.838064 | 3.589491e-57 | -8.615850e-47 |
| Msa0525280 | Msa0783280 | 0.813363 | 2.657909e-51 | -8.615850e-47 |
| Msa0525280 | Msa0786100 | 0.846487 | 2.106465e-59 | -8.615850e-47 |
| Msa0525280 | Msa0790640 | 0.866062 | 3.752705e-65 | -8.615850e-47 |
| Msa0525280 | Msa0793100 | 0.859711 | 3.422888e-63 | -8.615850e-47 |
| Msa0525280 | Msa0802210 | 0.815741 | 7.915963e-52 | -8.615850e-47 |
| Msa0525280 | Msa0806720 | 0.921314 | 4.193396e-88 | -8.615850e-47 |
| Msa0525280 | Msa0806760 | 0.920376 | 1.383671e-87 | -8.615850e-47 |
| Msa0525280 | Msa0809300 | 0.847292 | 1.268511e-59 | -8.615850e-47 |
| Msa0525280 | Msa0819320 | 0.865727 | 4.787305e-65 | -8.615850e-47 |
| Msa0525280 | Msa0819330 | 0.806880 | 6.634683e-50 | -8.615850e-47 |
| Msa0525280 | Msa0819370 | 0.867146 | 1.697287e-65 | -8.615850e-47 |
| Msa0525280 | Msa0820520 | 0.803561 | 3.287201e-49 | -8.615850e-47 |
| Msa0525280 | Msa0823420 | 0.803503 | 3.379714e-49 | -8.615850e-47 |
| Msa0525280 | Msa0824140 | 0.806416 | 8.314170e-50 | -8.615850e-47 |
| Msa0525280 | Msa0828570 | 0.810793 | 9.659540e-51 | -8.615850e-47 |
| Msa0525280 | Msa0829570 | 0.805285 | 1.437144e-49 | -8.615850e-47 |
| Msa0525280 | Msa0830720 | 0.806287 | 8.849259e-50 | -8.615850e-47 |
| Msa0525280 | Msa0848380 | 0.812389 | 4.346126e-51 | -8.615850e-47 |
| Msa0525280 | Msa0848760 | 0.883454 | 4.424668e-71 | -8.615850e-47 |
| Msa0525280 | Msa0853580 | 0.805907 | 1.064243e-49 | -8.615850e-47 |
| Msa0525280 | Msa0859510 | 0.800735 | 1.253654e-48 | -8.615850e-47 |
| Msa0525280 | Msa0860920 | 0.837872 | 4.021440e-57 | -8.615850e-47 |
| Msa0525280 | Msa0862290 | 0.817956 | 2.519149e-52 | -8.615850e-47 |
| Msa0525280 | Msa0863250 | 0.808210 | 3.464629e-50 | -8.615850e-47 |
| Msa0525280 | Msa0879650 | 0.801358 | 9.350903e-49 | -8.615850e-47 |
| Msa0525280 | Msa0882700 | 0.883565 | 4.029798e-71 | -8.615850e-47 |
| Msa0525280 | Msa0899700 | 0.822777 | 1.975112e-53 | -8.615850e-47 |
| Msa0525280 | Msa0904630 | 0.830876 | 2.293982e-55 | -8.615850e-47 |
| Msa0525280 | Msa0910010 | 0.803654 | 3.145112e-49 | -8.615850e-47 |
| Msa0525280 | Msa0929940 | 0.851455 | 8.777413e-61 | -8.615850e-47 |
| Msa0525280 | Msa0936650 | 0.814146 | 1.787521e-51 | -8.615850e-47 |
| Msa0525280 | Msa0936690 | 0.841922 | 3.540786e-58 | -8.615850e-47 |
| Msa0525280 | Msa0944690 | 0.904905 | 7.527110e-80 | -8.615850e-47 |
| Msa0525280 | Msa0945960 | 0.914873 | 1.149070e-84 | -8.615850e-47 |
| Msa0525280 | Msa0955260 | 0.814907 | 1.212757e-51 | -8.615850e-47 |
| Msa0525280 | Msa0968780 | 0.866464 | 2.796736e-65 | -8.615850e-47 |
| Msa0525280 | Msa0973890 | 0.836413 | 9.496730e-57 | -8.615850e-47 |
| Msa0525280 | Msa0984000 | 0.917936 | 2.889971e-86 | -8.615850e-47 |
| Msa0525280 | Msa1004210 | 0.821496 | 3.915151e-53 | -8.615850e-47 |
| Msa0525280 | Msa1014350 | 0.803600 | 3.226566e-49 | -8.615850e-47 |
| Msa0525280 | Msa1027790 | 0.804199 | 2.422543e-49 | -8.615850e-47 |
| Msa0525280 | Msa1029430 | 0.822567 | 2.211260e-53 | -8.615850e-47 |
| Msa0525280 | Msa1030870 | 0.878237 | 3.303705e-69 | -8.615850e-47 |
| Msa0525280 | Msa1034930 | 0.843889 | 1.061386e-58 | -8.615850e-47 |
| Msa0525280 | Msa1036250 | 0.869443 | 3.085202e-66 | -8.615850e-47 |
| Msa0525280 | Msa1046610 | 0.806946 | 6.425626e-50 | -8.615850e-47 |
| Msa0525280 | Msa1053690 | 0.834768 | 2.475613e-56 | -8.615850e-47 |
| Msa0525280 | Msa1055360 | 0.825119 | 5.577890e-54 | -8.615850e-47 |
| Msa0525280 | Msa1063920 | 0.826104 | 3.258466e-54 | -8.615850e-47 |
| Msa0525280 | Msa1068290 | 0.815979 | 7.004719e-52 | -8.615850e-47 |
| Msa0525280 | Msa1069960 | 0.901551 | 2.390405e-78 | -8.615850e-47 |
| Msa0525280 | Msa1072340 | 0.804495 | 2.102323e-49 | -8.615850e-47 |
| Msa0525280 | Msa1075340 | 0.839183 | 1.845131e-57 | -8.615850e-47 |
| Msa0525280 | Msa1076520 | 0.868077 | 8.532884e-66 | -8.615850e-47 |
| Msa0525280 | Msa1079480 | 0.848033 | 7.930900e-60 | -8.615850e-47 |
| Msa0525280 | Msa1080620 | 0.815233 | 1.026642e-51 | -8.615850e-47 |
| Msa0525280 | Msa1080690 | 0.813957 | 1.967383e-51 | -8.615850e-47 |
| Msa0525280 | Msa1080840 | 0.816233 | 6.144996e-52 | -8.615850e-47 |
| Msa0525280 | Msa1082150 | 0.884439 | 1.915155e-71 | -8.615850e-47 |
| Msa0525280 | Msa1083740 | -0.808141 | 3.583725e-50 | -8.615850e-47 |
| Msa0525280 | Msa1093390 | 0.804951 | 1.688308e-49 | -8.615850e-47 |
| Msa0525280 | Msa1108140 | 0.822870 | 1.879557e-53 | -8.615850e-47 |
| Msa0525280 | Msa1115830 | 0.810486 | 1.125416e-50 | -8.615850e-47 |
| Msa0525280 | Msa1118150 | 0.808407 | 3.144273e-50 | -8.615850e-47 |
| Msa0525280 | Msa1118460 | 0.855217 | 7.314907e-62 | -8.615850e-47 |
| Msa0525280 | Msa1118980 | 0.824133 | 9.518648e-54 | -8.615850e-47 |
| Msa0525280 | Msa1119860 | 0.896752 | 2.728021e-76 | -8.615850e-47 |
| Msa0525280 | Msa1122720 | 0.864533 | 1.135934e-64 | -8.615850e-47 |
| Msa0525280 | Msa1126310 | 0.802144 | 6.450281e-49 | -8.615850e-47 |
| Msa0525280 | Msa1127900 | 0.814037 | 1.889523e-51 | -8.615850e-47 |
| Msa0525280 | Msa1128650 | -0.806643 | 7.447716e-50 | -8.615850e-47 |
| Msa0525280 | Msa1131180 | -0.802460 | 5.552959e-49 | -8.615850e-47 |
| Msa0525280 | Msa1131900 | 0.826191 | 3.106357e-54 | -8.615850e-47 |
| Msa0525280 | Msa1134560 | 0.845297 | 4.434537e-59 | -8.615850e-47 |
| Msa0525280 | Msa1144700 | 0.815489 | 9.006231e-52 | -8.615850e-47 |
| Msa0525280 | Msa1144730 | 0.928148 | 4.347348e-92 | -8.615850e-47 |
| Msa0525280 | Msa1144950 | 0.883361 | 4.787855e-71 | -8.615850e-47 |
| Msa0525280 | Msa1151820 | 0.825440 | 4.683496e-54 | -8.615850e-47 |
| Msa0525280 | Msa1157730 | 0.841388 | 4.898493e-58 | -8.615850e-47 |
| Msa0525280 | Msa1158090 | 0.807310 | 5.379924e-50 | -8.615850e-47 |
| Msa0525280 | Msa1162330 | 0.807437 | 5.056328e-50 | -8.615850e-47 |
| Msa0525280 | Msa1162730 | 0.835647 | 1.485428e-56 | -8.615850e-47 |
| Msa0525280 | Msa1165810 | 0.823578 | 1.284668e-53 | -8.615850e-47 |
| Msa0525280 | Msa1173380 | 0.898292 | 6.123677e-77 | -8.615850e-47 |
| Msa0525280 | Msa1177240 | 0.875224 | 3.647534e-68 | -8.615850e-47 |
| Msa0525280 | Msa1181510 | 0.827902 | 1.210135e-54 | -8.615850e-47 |
| Msa0525280 | Msa1182800 | 0.856399 | 3.304144e-62 | -8.615850e-47 |
| Msa0525280 | Msa1182830 | 0.829657 | 4.554764e-55 | -8.615850e-47 |
| Msa0525280 | Msa1183390 | 0.800110 | 1.680953e-48 | -8.615850e-47 |
| Msa0525280 | Msa1184010 | 0.848021 | 7.993009e-60 | -8.615850e-47 |
| Msa0525280 | Msa1192150 | 0.801879 | 7.312370e-49 | -8.615850e-47 |
| Msa0525280 | Msa1206830 | 0.805027 | 1.627108e-49 | -8.615850e-47 |
| Msa0525280 | Msa1216600 | -0.806069 | 9.836431e-50 | -8.615850e-47 |
| Msa0525280 | Msa1219780 | -0.812590 | 3.927363e-51 | -8.615850e-47 |
| Msa0525280 | Msa1222030 | -0.819313 | 1.240262e-52 | -8.615850e-47 |
| Msa0525280 | Msa1222580 | 0.808531 | 2.958809e-50 | -8.615850e-47 |
| Msa0525280 | Msa1226880 | 0.828108 | 1.080006e-54 | -8.615850e-47 |
| Msa0525280 | Msa1228350 | 0.849188 | 3.795157e-60 | -8.615850e-47 |
| Msa0525280 | Msa1228460 | 0.806771 | 6.995603e-50 | -8.615850e-47 |
| Msa0525280 | Msa1229640 | 0.808073 | 3.704295e-50 | -8.615850e-47 |
| Msa0525280 | Msa1231260 | 0.801037 | 1.087625e-48 | -8.615850e-47 |
| Msa0525280 | Msa1232270 | 0.812083 | 5.066930e-51 | -8.615850e-47 |
| Msa0525280 | Msa1238730 | 0.820487 | 6.682236e-53 | -8.615850e-47 |
| Msa0525280 | Msa1239900 | 0.808036 | 3.771597e-50 | -8.615850e-47 |
| Msa0525280 | Msa1243730 | 0.800757 | 1.240836e-48 | -8.615850e-47 |
| Msa0525280 | Msa1245120 | -0.804522 | 2.074654e-49 | -8.615850e-47 |
| Msa0525280 | Msa1255020 | 0.813810 | 2.120152e-51 | -8.615850e-47 |
| Msa0525280 | Msa1263590 | 0.807424 | 5.090032e-50 | -8.615850e-47 |
| Msa0525280 | Msa1263670 | 0.803955 | 2.722247e-49 | -8.615850e-47 |
| Msa0525280 | Msa1266710 | -0.804741 | 1.867752e-49 | -8.615850e-47 |
| Msa0525280 | Msa1272950 | 0.823862 | 1.102036e-53 | -8.615850e-47 |
| Msa0525280 | Msa1276080 | 0.802967 | 4.363650e-49 | -8.615850e-47 |
| Msa0525280 | Msa1281270 | 0.855302 | 6.912769e-62 | -8.615850e-47 |
| Msa0525280 | Msa1286680 | 0.807385 | 5.188042e-50 | -8.615850e-47 |
| Msa0525280 | Msa1293050 | 0.891802 | 2.847607e-74 | -8.615850e-47 |
| Msa0525280 | Msa1295470 | 0.808860 | 2.516285e-50 | -8.615850e-47 |
| Msa0525280 | Msa1306190 | 0.843779 | 1.135922e-58 | -8.615850e-47 |
| Msa0525280 | Msa1306200 | 0.844464 | 7.438190e-59 | -8.615850e-47 |
| Msa0525280 | Msa1317030 | 0.854197 | 1.444845e-61 | -8.615850e-47 |
| Msa0525280 | Msa1317600 | 0.834233 | 3.375018e-56 | -8.615850e-47 |
| Msa0525280 | Msa1320380 | 0.860362 | 2.177376e-63 | -8.615850e-47 |
| Msa0525280 | Msa1326400 | 0.838809 | 2.306057e-57 | -8.615850e-47 |
| Msa0525280 | Msa1338590 | 0.858353 | 8.735822e-63 | -8.615850e-47 |
| Msa0525280 | Msa1349810 | 0.892618 | 1.344335e-74 | -8.615850e-47 |
| Msa0525280 | Msa1354090 | 0.905633 | 3.493827e-80 | -8.615850e-47 |
| Msa0525280 | Msa1358340 | 0.897576 | 1.229474e-76 | -8.615850e-47 |
| Msa0525280 | Msa1359620 | 0.809211 | 2.116330e-50 | -8.615850e-47 |
| Msa0525280 | Msa1359890 | 0.902243 | 1.183222e-78 | -8.615850e-47 |
| Msa0525280 | Msa1361190 | 0.836148 | 1.108672e-56 | -8.615850e-47 |
| Msa0525280 | Msa1369180 | 0.807584 | 4.706529e-50 | -8.615850e-47 |
| Msa0525280 | Msa1370930 | -0.806227 | 9.113397e-50 | -8.615850e-47 |
| Msa0525280 | Msa1373390 | 0.817653 | 2.950057e-52 | -8.615850e-47 |
| Msa0525280 | Msa1375780 | 0.814447 | 1.533413e-51 | -8.615850e-47 |
| Msa0525280 | Msa1376350 | 0.801210 | 1.002540e-48 | -8.615850e-47 |
| Msa0525280 | Msa1378470 | 0.845358 | 4.269198e-59 | -8.615850e-47 |
| Msa0525280 | Msa1380720 | 0.817988 | 2.478657e-52 | -8.615850e-47 |
| Msa0525280 | Msa1381210 | -0.815078 | 1.111607e-51 | -8.615850e-47 |
| Msa0525280 | Msa1394900 | 0.895660 | 7.760329e-76 | -8.615850e-47 |
| Msa0525280 | Msa1403700 | 0.805966 | 1.034202e-49 | -8.615850e-47 |
| Msa0525280 | Msa1405380 | 0.831508 | 1.603976e-55 | -8.615850e-47 |
| Msa0525280 | Msa1405770 | 0.810539 | 1.096413e-50 | -8.615850e-47 |
| Msa0525280 | Msa1406020 | 0.870338 | 1.573595e-66 | -8.615850e-47 |
| Msa0525280 | Msa1407210 | -0.822491 | 2.302734e-53 | -8.615850e-47 |
| Msa0525280 | Msa1412520 | 0.825893 | 3.657212e-54 | -8.615850e-47 |
| Msa0525280 | Msa1418600 | 0.801935 | 7.119100e-49 | -8.615850e-47 |
| Msa0525280 | Msa1420520 | 0.821308 | 4.327180e-53 | -8.615850e-47 |
| Msa0525280 | Msa1422890 | 0.847922 | 8.511118e-60 | -8.615850e-47 |
| Msa0525280 | Msa1423190 | 0.819555 | 1.092306e-52 | -8.615850e-47 |
| Msa0525280 | Msa1423230 | 0.816010 | 6.894558e-52 | -8.615850e-47 |
| Msa0525280 | Msa1430760 | 0.822779 | 1.973649e-53 | -8.615850e-47 |
| Msa0525280 | Msa1431730 | 0.809383 | 1.944555e-50 | -8.615850e-47 |
| Msa0525280 | Msa1434660 | 0.902322 | 1.090905e-78 | -8.615850e-47 |
| Msa0525280 | Msa1439120 | 0.864110 | 1.539437e-64 | -8.615850e-47 |
| Msa0525280 | Msa1440220 | 0.852098 | 5.767897e-61 | -8.615850e-47 |
| Msa0525280 | Msa1443550 | 0.816401 | 5.636295e-52 | -8.615850e-47 |
| Msa0525280 | Msa1455660 | 0.863986 | 1.682433e-64 | -8.615850e-47 |
| Msa0525280 | Msa1459540 | 0.870084 | 1.905713e-66 | -8.615850e-47 |
| Msa0525280 | Msa1466350 | 0.847054 | 1.474095e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525280 | MtrunA17_Chr3g0137861 | 97.857 | 140 | 3 | 0 | 1 | 140 | 1 | 140 | 3.46e-99 | 280 |
| Msa0525280 | MtrunA17_Chr4g0063651 | 52.885 | 104 | 48 | 1 | 37 | 139 | 29 | 132 | 4.37e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525280 | AT3G47650.1 | 69.136 | 81 | 25 | 0 | 60 | 140 | 56 | 136 | 3.44e-37 | 124 |
Find 44 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACATTTCAGGGTCAATTA+TGG | 0.200301 | 3_4:+78838168 | Msa0525280:CDS |
| TTCAATGAAGTATGTAATAA+TGG | 0.243773 | 3_4:-78839202 | None:intergenic |
| GTGCCTCCTGTTGGCTTTGC+GGG | 0.255239 | 3_4:+78838677 | Msa0525280:CDS |
| TCAGCACAGATGACACTATT+TGG | 0.263290 | 3_4:-78838359 | None:intergenic |
| ATACGAACCGAAAACATTTC+AGG | 0.285412 | 3_4:+78838157 | Msa0525280:CDS |
| TGCAATGGAGCTGGATTTAT+CGG | 0.322631 | 3_4:+78838933 | Msa0525280:CDS |
| GTTCAAACTTCTGAATGTTC+AGG | 0.329988 | 3_4:+78838111 | Msa0525280:CDS |
| AACATTTCAGGGTCAATTAT+GGG | 0.350289 | 3_4:+78838169 | Msa0525280:CDS |
| ATTTATCTGTGGGAGGGCCT+TGG | 0.381621 | 3_4:-78838194 | None:intergenic |
| TGCCTAACACCTTCATGTCT+TGG | 0.395804 | 3_4:+78838072 | Msa0525280:CDS |
| TCAATGAAGTATGTAATAAT+GGG | 0.409734 | 3_4:-78839201 | None:intergenic |
| TTATTACATACTTCATTGAA+TGG | 0.423113 | 3_4:+78839205 | Msa0525280:three_prime_UTR |
| GGTGCCTCCTGTTGGCTTTG+CGG | 0.447694 | 3_4:+78838676 | Msa0525280:CDS |
| TTGGATCTGTCCCTCCCTAC+TGG | 0.458506 | 3_4:-78838977 | None:intergenic |
| TTCGATGGACTGTTTAAAGC+TGG | 0.460757 | 3_4:+78838655 | Msa0525280:CDS |
| CAGTTCACTTGTAGCCATAG+TGG | 0.465843 | 3_4:+78839092 | Msa0525280:three_prime_UTR |
| TACGAACCGAAAACATTTCA+GGG | 0.468265 | 3_4:+78838158 | Msa0525280:CDS |
| TAGGTACCCGCAAAGCCAAC+AGG | 0.473779 | 3_4:-78838683 | None:intergenic |
| CTGAACTTGTTCGCAGTCGT+TGG | 0.486092 | 3_4:-78838996 | None:intergenic |
| TGCCAAGACATGAAGGTGTT+AGG | 0.493946 | 3_4:-78838074 | None:intergenic |
| TTAAAGCTGGTGCCTCCTGT+TGG | 0.514045 | 3_4:+78838668 | Msa0525280:CDS |
| TGTGGGAATTGCAATGGAGC+TGG | 0.521634 | 3_4:+78838924 | Msa0525280:CDS |
| AGGGTCAATTATGGGTTCCA+AGG | 0.522125 | 3_4:+78838177 | Msa0525280:CDS |
| GGCAGGAAGGAGATGTTATG+TGG | 0.530714 | 3_4:+78838906 | Msa0525280:CDS |
| TGTGCTGATTGTGATGGAAA+TGG | 0.538508 | 3_4:+78838374 | Msa0525280:CDS |
| GCAGGAAGGAGATGTTATGT+GGG | 0.542628 | 3_4:+78838907 | Msa0525280:CDS |
| TGCTCTCAATGCAAAGGTAG+CGG | 0.551522 | 3_4:+78838613 | Msa0525280:CDS |
| CTTGAGCACATATGACCAGT+AGG | 0.554604 | 3_4:+78838962 | Msa0525280:CDS |
| GACAAGGCAATATTTATCTG+TGG | 0.574721 | 3_4:-78838205 | None:intergenic |
| GGCAATATTTATCTGTGGGA+GGG | 0.576292 | 3_4:-78838200 | None:intergenic |
| ACAAGGCAATATTTATCTGT+GGG | 0.583163 | 3_4:-78838204 | None:intergenic |
| AGGCAAAGAGCAGATACCAT+TGG | 0.591049 | 3_4:-78838054 | None:intergenic |
| ATGTTATGTGGGAATTGCAA+TGG | 0.609174 | 3_4:+78838918 | Msa0525280:CDS |
| AATGGAGCTGGATTTATCGG+TGG | 0.609254 | 3_4:+78838936 | Msa0525280:CDS |
| AATGTACCTTTGCAGTGACA+AGG | 0.612316 | 3_4:-78838221 | None:intergenic |
| TTGAGCACATATGACCAGTA+GGG | 0.613108 | 3_4:+78838963 | Msa0525280:CDS |
| AGGCAATATTTATCTGTGGG+AGG | 0.615579 | 3_4:-78838201 | None:intergenic |
| ATTGTCTGCTCTCAATGCAA+AGG | 0.622596 | 3_4:+78838607 | Msa0525280:CDS |
| GTCATCTGTGCTGATTGTGA+TGG | 0.623087 | 3_4:+78838368 | Msa0525280:CDS |
| AGCACATATGACCAGTAGGG+AGG | 0.624035 | 3_4:+78838966 | Msa0525280:exon |
| CACTATCATACTGATGCTCA+AGG | 0.627147 | 3_4:+78839143 | Msa0525280:three_prime_UTR |
| ATATTGCCTTGTCACTGCAA+AGG | 0.634181 | 3_4:+78838215 | Msa0525280:CDS |
| GCACATATGACCAGTAGGGA+GGG | 0.642431 | 3_4:+78838967 | Msa0525280:exon |
| GTACCCGCAAAGCCAACAGG+AGG | 0.718423 | 3_4:-78838680 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAAAAATGC+AGG | + | chr3_4:78839119-78839138 | Msa0525280:three_prime_UTR | 10.0% |
| !! | TAAAAAAAAAAAAAAAATGC+AGG | + | chr3_4:78839119-78839138 | Msa0525280:three_prime_UTR | 10.0% |
| !!! | TTATATTTTGTGTAATTAAC+AGG | + | chr3_4:78838580-78838599 | Msa0525280:intron | 15.0% |
| !!! | ATAGAATGATTTTACTAATT+AGG | - | chr3_4:78838705-78838724 | None:intergenic | 15.0% |
| !! | AAAATTTGCATTTAACAATT+AGG | - | chr3_4:78838765-78838784 | None:intergenic | 15.0% |
| !!! | TTATATTTTGTGTAATTAAC+AGG | + | chr3_4:78838580-78838599 | Msa0525280:intron | 15.0% |
| !!! | ATAGAATGATTTTACTAATT+AGG | - | chr3_4:78838705-78838724 | None:intergenic | 15.0% |
| !! | AAAATTTGCATTTAACAATT+AGG | - | chr3_4:78838765-78838784 | None:intergenic | 15.0% |
| !!! | AGATGACATATGATTTTATA+AGG | + | chr3_4:78838399-78838418 | Msa0525280:intron | 20.0% |
| !! | CGATGAACAATAATAATATA+AGG | - | chr3_4:78838872-78838891 | None:intergenic | 20.0% |
| !! | TCAATGAAGTATGTAATAAT+GGG | - | chr3_4:78839204-78839223 | None:intergenic | 20.0% |
| !! | TTCAATGAAGTATGTAATAA+TGG | - | chr3_4:78839205-78839224 | None:intergenic | 20.0% |
| !! | TTATTACATACTTCATTGAA+TGG | + | chr3_4:78839205-78839224 | Msa0525280:three_prime_UTR | 20.0% |
| !!! | AGATGACATATGATTTTATA+AGG | + | chr3_4:78838399-78838418 | Msa0525280:intron | 20.0% |
| !! | CGATGAACAATAATAATATA+AGG | - | chr3_4:78838872-78838891 | None:intergenic | 20.0% |
| !! | TCAATGAAGTATGTAATAAT+GGG | - | chr3_4:78839204-78839223 | None:intergenic | 20.0% |
| !! | TTCAATGAAGTATGTAATAA+TGG | - | chr3_4:78839205-78839224 | None:intergenic | 20.0% |
| !! | TTATTACATACTTCATTGAA+TGG | + | chr3_4:78839205-78839224 | Msa0525280:three_prime_UTR | 20.0% |
| !!! | TATTTGGTTTTGTGTTTTGT+TGG | - | chr3_4:78838346-78838365 | None:intergenic | 25.0% |
| ! | AATGTATTTGTGGTTATTGA+AGG | + | chr3_4:78838515-78838534 | Msa0525280:intron | 25.0% |
| ! | CAAGAGAAAATATACATCTA+CGG | + | chr3_4:78838544-78838563 | Msa0525280:intron | 25.0% |
| ! | TAATAATATAAGGCACATTG+TGG | - | chr3_4:78838862-78838881 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTAGCAACCACTA+TGG | - | chr3_4:78839109-78839128 | None:intergenic | 25.0% |
| !!! | TATTTGGTTTTGTGTTTTGT+TGG | - | chr3_4:78838346-78838365 | None:intergenic | 25.0% |
| ! | AATGTATTTGTGGTTATTGA+AGG | + | chr3_4:78838515-78838534 | Msa0525280:intron | 25.0% |
| ! | CAAGAGAAAATATACATCTA+CGG | + | chr3_4:78838544-78838563 | Msa0525280:intron | 25.0% |
| ! | TAATAATATAAGGCACATTG+TGG | - | chr3_4:78838862-78838881 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTAGCAACCACTA+TGG | - | chr3_4:78839109-78839128 | None:intergenic | 25.0% |
| ! | AATTGACCCTGAAATGTTTT+CGG | - | chr3_4:78838167-78838186 | None:intergenic | 30.0% |
| AAACATTTCAGGGTCAATTA+TGG | + | chr3_4:78838168-78838187 | Msa0525280:CDS | 30.0% | |
| AACATTTCAGGGTCAATTAT+GGG | + | chr3_4:78838169-78838188 | Msa0525280:CDS | 30.0% | |
| ACAAGGCAATATTTATCTGT+GGG | - | chr3_4:78838207-78838226 | None:intergenic | 30.0% | |
| AACGATTTACATGCTCATAA+CGG | - | chr3_4:78838470-78838489 | None:intergenic | 30.0% | |
| TGCTTCTTGTAATGTATTTG+TGG | + | chr3_4:78838505-78838524 | Msa0525280:intron | 30.0% | |
| ! | AACTCTGTTGATATTTTCGA+TGG | + | chr3_4:78838640-78838659 | Msa0525280:CDS | 30.0% |
| ! | AATTGACCCTGAAATGTTTT+CGG | - | chr3_4:78838167-78838186 | None:intergenic | 30.0% |
| AAACATTTCAGGGTCAATTA+TGG | + | chr3_4:78838168-78838187 | Msa0525280:CDS | 30.0% | |
| AACATTTCAGGGTCAATTAT+GGG | + | chr3_4:78838169-78838188 | Msa0525280:CDS | 30.0% | |
| ACAAGGCAATATTTATCTGT+GGG | - | chr3_4:78838207-78838226 | None:intergenic | 30.0% | |
| AACGATTTACATGCTCATAA+CGG | - | chr3_4:78838470-78838489 | None:intergenic | 30.0% | |
| TGCTTCTTGTAATGTATTTG+TGG | + | chr3_4:78838505-78838524 | Msa0525280:intron | 30.0% | |
| ! | AACTCTGTTGATATTTTCGA+TGG | + | chr3_4:78838640-78838659 | Msa0525280:CDS | 30.0% |
| !! | ATTTTAGTGCCAAGACATGA+AGG | - | chr3_4:78838084-78838103 | None:intergenic | 35.0% |
| GTTCAAACTTCTGAATGTTC+AGG | + | chr3_4:78838111-78838130 | Msa0525280:CDS | 35.0% | |
| ATACGAACCGAAAACATTTC+AGG | + | chr3_4:78838157-78838176 | Msa0525280:CDS | 35.0% | |
| TACGAACCGAAAACATTTCA+GGG | + | chr3_4:78838158-78838177 | Msa0525280:CDS | 35.0% | |
| GACAAGGCAATATTTATCTG+TGG | - | chr3_4:78838208-78838227 | None:intergenic | 35.0% | |
| ! | TCACTGCAAAGGTACATTTA+TGG | + | chr3_4:78838226-78838245 | Msa0525280:intron | 35.0% |
| ! | CACTGCAAAGGTACATTTAT+GGG | + | chr3_4:78838227-78838246 | Msa0525280:intron | 35.0% |
| AAGGCTTCATTGTATTCTAG+AGG | - | chr3_4:78838800-78838819 | None:intergenic | 35.0% | |
| ! | AATGAAGCCTTATGATCAGT+AGG | + | chr3_4:78838809-78838828 | Msa0525280:intron | 35.0% |
| ! | ATGAAGCCTTATGATCAGTA+GGG | + | chr3_4:78838810-78838829 | Msa0525280:intron | 35.0% |
| !!! | TTCATCGTTTTTTACTCCAG+AGG | + | chr3_4:78838885-78838904 | Msa0525280:intron | 35.0% |
| ATGTTATGTGGGAATTGCAA+TGG | + | chr3_4:78838918-78838937 | Msa0525280:CDS | 35.0% | |
| !! | ATTTTAGTGCCAAGACATGA+AGG | - | chr3_4:78838084-78838103 | None:intergenic | 35.0% |
| GTTCAAACTTCTGAATGTTC+AGG | + | chr3_4:78838111-78838130 | Msa0525280:CDS | 35.0% | |
| ATACGAACCGAAAACATTTC+AGG | + | chr3_4:78838157-78838176 | Msa0525280:CDS | 35.0% | |
| TACGAACCGAAAACATTTCA+GGG | + | chr3_4:78838158-78838177 | Msa0525280:CDS | 35.0% | |
| GACAAGGCAATATTTATCTG+TGG | - | chr3_4:78838208-78838227 | None:intergenic | 35.0% | |
| ! | TCACTGCAAAGGTACATTTA+TGG | + | chr3_4:78838226-78838245 | Msa0525280:intron | 35.0% |
| ! | CACTGCAAAGGTACATTTAT+GGG | + | chr3_4:78838227-78838246 | Msa0525280:intron | 35.0% |
| AAGGCTTCATTGTATTCTAG+AGG | - | chr3_4:78838800-78838819 | None:intergenic | 35.0% | |
| ! | AATGAAGCCTTATGATCAGT+AGG | + | chr3_4:78838809-78838828 | Msa0525280:intron | 35.0% |
| ! | ATGAAGCCTTATGATCAGTA+GGG | + | chr3_4:78838810-78838829 | Msa0525280:intron | 35.0% |
| !!! | TTCATCGTTTTTTACTCCAG+AGG | + | chr3_4:78838885-78838904 | Msa0525280:intron | 35.0% |
| ATGTTATGTGGGAATTGCAA+TGG | + | chr3_4:78838918-78838937 | Msa0525280:CDS | 35.0% | |
| GGCAATATTTATCTGTGGGA+GGG | - | chr3_4:78838203-78838222 | None:intergenic | 40.0% | |
| AGGCAATATTTATCTGTGGG+AGG | - | chr3_4:78838204-78838223 | None:intergenic | 40.0% | |
| ATATTGCCTTGTCACTGCAA+AGG | + | chr3_4:78838215-78838234 | Msa0525280:CDS | 40.0% | |
| AATGTACCTTTGCAGTGACA+AGG | - | chr3_4:78838224-78838243 | None:intergenic | 40.0% | |
| TCAGCACAGATGACACTATT+TGG | - | chr3_4:78838362-78838381 | None:intergenic | 40.0% | |
| !! | TGTGCTGATTGTGATGGAAA+TGG | + | chr3_4:78838374-78838393 | Msa0525280:CDS | 40.0% |
| ATTGTCTGCTCTCAATGCAA+AGG | + | chr3_4:78838607-78838626 | Msa0525280:CDS | 40.0% | |
| !! | TTCGATGGACTGTTTAAAGC+TGG | + | chr3_4:78838655-78838674 | Msa0525280:CDS | 40.0% |
| TGCAATGGAGCTGGATTTAT+CGG | + | chr3_4:78838933-78838952 | Msa0525280:CDS | 40.0% | |
| TTGAGCACATATGACCAGTA+GGG | + | chr3_4:78838963-78838982 | Msa0525280:CDS | 40.0% | |
| CACTATCATACTGATGCTCA+AGG | + | chr3_4:78839143-78839162 | Msa0525280:three_prime_UTR | 40.0% | |
| GGCAATATTTATCTGTGGGA+GGG | - | chr3_4:78838203-78838222 | None:intergenic | 40.0% | |
| AGGCAATATTTATCTGTGGG+AGG | - | chr3_4:78838204-78838223 | None:intergenic | 40.0% | |
| ATATTGCCTTGTCACTGCAA+AGG | + | chr3_4:78838215-78838234 | Msa0525280:CDS | 40.0% | |
| AATGTACCTTTGCAGTGACA+AGG | - | chr3_4:78838224-78838243 | None:intergenic | 40.0% | |
| TCAGCACAGATGACACTATT+TGG | - | chr3_4:78838362-78838381 | None:intergenic | 40.0% | |
| !! | TGTGCTGATTGTGATGGAAA+TGG | + | chr3_4:78838374-78838393 | Msa0525280:CDS | 40.0% |
| ATTGTCTGCTCTCAATGCAA+AGG | + | chr3_4:78838607-78838626 | Msa0525280:CDS | 40.0% | |
| !! | TTCGATGGACTGTTTAAAGC+TGG | + | chr3_4:78838655-78838674 | Msa0525280:CDS | 40.0% |
| TGCAATGGAGCTGGATTTAT+CGG | + | chr3_4:78838933-78838952 | Msa0525280:CDS | 40.0% | |
| TTGAGCACATATGACCAGTA+GGG | + | chr3_4:78838963-78838982 | Msa0525280:CDS | 40.0% | |
| CACTATCATACTGATGCTCA+AGG | + | chr3_4:78839143-78839162 | Msa0525280:three_prime_UTR | 40.0% | |
| TGCCTAACACCTTCATGTCT+TGG | + | chr3_4:78838072-78838091 | Msa0525280:CDS | 45.0% | |
| !! | TGCCAAGACATGAAGGTGTT+AGG | - | chr3_4:78838077-78838096 | None:intergenic | 45.0% |
| AGGGTCAATTATGGGTTCCA+AGG | + | chr3_4:78838177-78838196 | Msa0525280:CDS | 45.0% | |
| !! | GTCATCTGTGCTGATTGTGA+TGG | + | chr3_4:78838368-78838387 | Msa0525280:CDS | 45.0% |
| TGCTCTCAATGCAAAGGTAG+CGG | + | chr3_4:78838613-78838632 | Msa0525280:CDS | 45.0% | |
| ! | AAGCCTTATGATCAGTAGGG+AGG | + | chr3_4:78838813-78838832 | Msa0525280:intron | 45.0% |
| GTTCCTCCCTACTGATCATA+AGG | - | chr3_4:78838819-78838838 | None:intergenic | 45.0% | |
| !!! | TCGTTTTTTACTCCAGAGGC+AGG | + | chr3_4:78838889-78838908 | Msa0525280:intron | 45.0% |
| ! | TTTTTACTCCAGAGGCAGGA+AGG | + | chr3_4:78838893-78838912 | Msa0525280:intron | 45.0% |
| GCAGGAAGGAGATGTTATGT+GGG | + | chr3_4:78838907-78838926 | Msa0525280:CDS | 45.0% | |
| AATGGAGCTGGATTTATCGG+TGG | + | chr3_4:78838936-78838955 | Msa0525280:CDS | 45.0% | |
| CTTGAGCACATATGACCAGT+AGG | + | chr3_4:78838962-78838981 | Msa0525280:CDS | 45.0% | |
| CAGTTCACTTGTAGCCATAG+TGG | + | chr3_4:78839092-78839111 | Msa0525280:three_prime_UTR | 45.0% | |
| TAGGCAAAGAGCAGATACCA+TGG | - | chr3_4:78838058-78838077 | None:intergenic | 45.0% | |
| TGCCTAACACCTTCATGTCT+TGG | + | chr3_4:78838072-78838091 | Msa0525280:CDS | 45.0% | |
| !! | TGCCAAGACATGAAGGTGTT+AGG | - | chr3_4:78838077-78838096 | None:intergenic | 45.0% |
| AGGGTCAATTATGGGTTCCA+AGG | + | chr3_4:78838177-78838196 | Msa0525280:CDS | 45.0% | |
| !! | GTCATCTGTGCTGATTGTGA+TGG | + | chr3_4:78838368-78838387 | Msa0525280:CDS | 45.0% |
| TGCTCTCAATGCAAAGGTAG+CGG | + | chr3_4:78838613-78838632 | Msa0525280:CDS | 45.0% | |
| ! | AAGCCTTATGATCAGTAGGG+AGG | + | chr3_4:78838813-78838832 | Msa0525280:intron | 45.0% |
| GTTCCTCCCTACTGATCATA+AGG | - | chr3_4:78838819-78838838 | None:intergenic | 45.0% | |
| !!! | TCGTTTTTTACTCCAGAGGC+AGG | + | chr3_4:78838889-78838908 | Msa0525280:intron | 45.0% |
| ! | TTTTTACTCCAGAGGCAGGA+AGG | + | chr3_4:78838893-78838912 | Msa0525280:intron | 45.0% |
| GCAGGAAGGAGATGTTATGT+GGG | + | chr3_4:78838907-78838926 | Msa0525280:CDS | 45.0% | |
| AATGGAGCTGGATTTATCGG+TGG | + | chr3_4:78838936-78838955 | Msa0525280:CDS | 45.0% | |
| CTTGAGCACATATGACCAGT+AGG | + | chr3_4:78838962-78838981 | Msa0525280:CDS | 45.0% | |
| CAGTTCACTTGTAGCCATAG+TGG | + | chr3_4:78839092-78839111 | Msa0525280:three_prime_UTR | 45.0% | |
| !! | TAATTATTTATTTATTATGT+AGG | + | chr3_4:78838307-78838326 | Msa0525280:intron | 5.0% |
| !! | TAATTATTTATTTATTATGT+AGG | + | chr3_4:78838307-78838326 | Msa0525280:intron | 5.0% |
| ATTTATCTGTGGGAGGGCCT+TGG | - | chr3_4:78838197-78838216 | None:intergenic | 50.0% | |
| TTAAAGCTGGTGCCTCCTGT+TGG | + | chr3_4:78838668-78838687 | Msa0525280:CDS | 50.0% | |
| TAACATCTCCTTCCTGCCTC+TGG | - | chr3_4:78838904-78838923 | None:intergenic | 50.0% | |
| GGCAGGAAGGAGATGTTATG+TGG | + | chr3_4:78838906-78838925 | Msa0525280:CDS | 50.0% | |
| TGTGGGAATTGCAATGGAGC+TGG | + | chr3_4:78838924-78838943 | Msa0525280:CDS | 50.0% | |
| AGCACATATGACCAGTAGGG+AGG | + | chr3_4:78838966-78838985 | Msa0525280:exon | 50.0% | |
| GCACATATGACCAGTAGGGA+GGG | + | chr3_4:78838967-78838986 | Msa0525280:exon | 50.0% | |
| ! | CTGAACTTGTTCGCAGTCGT+TGG | - | chr3_4:78838999-78839018 | None:intergenic | 50.0% |
| ATTTATCTGTGGGAGGGCCT+TGG | - | chr3_4:78838197-78838216 | None:intergenic | 50.0% | |
| TTAAAGCTGGTGCCTCCTGT+TGG | + | chr3_4:78838668-78838687 | Msa0525280:CDS | 50.0% | |
| TAACATCTCCTTCCTGCCTC+TGG | - | chr3_4:78838904-78838923 | None:intergenic | 50.0% | |
| GGCAGGAAGGAGATGTTATG+TGG | + | chr3_4:78838906-78838925 | Msa0525280:CDS | 50.0% | |
| TGTGGGAATTGCAATGGAGC+TGG | + | chr3_4:78838924-78838943 | Msa0525280:CDS | 50.0% | |
| AGCACATATGACCAGTAGGG+AGG | + | chr3_4:78838966-78838985 | Msa0525280:exon | 50.0% | |
| GCACATATGACCAGTAGGGA+GGG | + | chr3_4:78838967-78838986 | Msa0525280:exon | 50.0% | |
| ! | CTGAACTTGTTCGCAGTCGT+TGG | - | chr3_4:78838999-78839018 | None:intergenic | 50.0% |
| TAGGTACCCGCAAAGCCAAC+AGG | - | chr3_4:78838686-78838705 | None:intergenic | 55.0% | |
| TTGGATCTGTCCCTCCCTAC+TGG | - | chr3_4:78838980-78838999 | None:intergenic | 55.0% | |
| TAGGTACCCGCAAAGCCAAC+AGG | - | chr3_4:78838686-78838705 | None:intergenic | 55.0% | |
| TTGGATCTGTCCCTCCCTAC+TGG | - | chr3_4:78838980-78838999 | None:intergenic | 55.0% | |
| !! | GGTGCCTCCTGTTGGCTTTG+CGG | + | chr3_4:78838676-78838695 | Msa0525280:CDS | 60.0% |
| !! | GTGCCTCCTGTTGGCTTTGC+GGG | + | chr3_4:78838677-78838696 | Msa0525280:CDS | 60.0% |
| GTACCCGCAAAGCCAACAGG+AGG | - | chr3_4:78838683-78838702 | None:intergenic | 60.0% | |
| !! | GGTGCCTCCTGTTGGCTTTG+CGG | + | chr3_4:78838676-78838695 | Msa0525280:CDS | 60.0% |
| !! | GTGCCTCCTGTTGGCTTTGC+GGG | + | chr3_4:78838677-78838696 | Msa0525280:CDS | 60.0% |
| GTACCCGCAAAGCCAACAGG+AGG | - | chr3_4:78838683-78838702 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 78838057 | 78839237 | 78838057 | ID=Msa0525280;Name=Msa0525280 |
| chr3_4 | mRNA | 78838057 | 78839237 | 78838057 | ID=Msa0525280-mRNA-1;Parent=Msa0525280;Name=Msa0525280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.33|0.25|1|1|1|4|254|140 |
| chr3_4 | exon | 78838057 | 78838236 | 78838057 | ID=Msa0525280-mRNA-1:exon:23462;Parent=Msa0525280-mRNA-1 |
| chr3_4 | exon | 78838329 | 78838395 | 78838329 | ID=Msa0525280-mRNA-1:exon:23463;Parent=Msa0525280-mRNA-1 |
| chr3_4 | exon | 78838602 | 78838698 | 78838602 | ID=Msa0525280-mRNA-1:exon:23464;Parent=Msa0525280-mRNA-1 |
| chr3_4 | exon | 78838905 | 78839237 | 78838905 | ID=Msa0525280-mRNA-1:exon:23465;Parent=Msa0525280-mRNA-1 |
| chr3_4 | CDS | 78838057 | 78838236 | 78838057 | ID=Msa0525280-mRNA-1:cds;Parent=Msa0525280-mRNA-1 |
| chr3_4 | CDS | 78838329 | 78838395 | 78838329 | ID=Msa0525280-mRNA-1:cds;Parent=Msa0525280-mRNA-1 |
| chr3_4 | CDS | 78838602 | 78838698 | 78838602 | ID=Msa0525280-mRNA-1:cds;Parent=Msa0525280-mRNA-1 |
| chr3_4 | CDS | 78838905 | 78838983 | 78838905 | ID=Msa0525280-mRNA-1:cds;Parent=Msa0525280-mRNA-1 |
| chr3_4 | three_prime_UTR | 78838984 | 78839237 | 78838984 | ID=Msa0525280-mRNA-1:three_prime_utr;Parent=Msa0525280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
