Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676100 | XP_003605778.1 | 61.538 | 117 | 6 | 1 | 3 | 80 | 2 | 118 | 3.47e-40 | 138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676100 | B7FMD2 | 61.538 | 117 | 6 | 1 | 3 | 80 | 2 | 118 | 1.66e-40 | 138 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0676100 | 0.808370 | 3.202665e-50 | -8.615850e-47 |
| Msa0008850 | Msa0676100 | 0.818857 | 1.574583e-52 | -8.615850e-47 |
| Msa0014410 | Msa0676100 | 0.871933 | 4.684245e-67 | -8.615850e-47 |
| Msa0020630 | Msa0676100 | 0.846955 | 1.569203e-59 | -8.615850e-47 |
| Msa0038310 | Msa0676100 | 0.808867 | 2.508430e-50 | -8.615850e-47 |
| Msa0040550 | Msa0676100 | -0.814044 | 1.882029e-51 | -8.615850e-47 |
| Msa0043940 | Msa0676100 | 0.824954 | 6.101713e-54 | -8.615850e-47 |
| Msa0044180 | Msa0676100 | 0.830472 | 2.881823e-55 | -8.615850e-47 |
| Msa0044710 | Msa0676100 | 0.829060 | 6.357960e-55 | -8.615850e-47 |
| Msa0050770 | Msa0676100 | 0.810152 | 1.328620e-50 | -8.615850e-47 |
| Msa0064550 | Msa0676100 | 0.872043 | 4.304038e-67 | -8.615850e-47 |
| Msa0068410 | Msa0676100 | 0.832348 | 9.948048e-56 | -8.615850e-47 |
| Msa0084680 | Msa0676100 | 0.807366 | 5.235333e-50 | -8.615850e-47 |
| Msa0090860 | Msa0676100 | 0.809756 | 1.616376e-50 | -8.615850e-47 |
| Msa0092710 | Msa0676100 | 0.819248 | 1.283129e-52 | -8.615850e-47 |
| Msa0108070 | Msa0676100 | 0.817507 | 3.181925e-52 | -8.615850e-47 |
| Msa0109490 | Msa0676100 | 0.862214 | 5.936277e-64 | -8.615850e-47 |
| Msa0114240 | Msa0676100 | 0.814303 | 1.650231e-51 | -8.615850e-47 |
| Msa0114250 | Msa0676100 | 0.829345 | 5.421008e-55 | -8.615850e-47 |
| Msa0604880 | Msa0676100 | 0.804258 | 2.355103e-49 | -8.615850e-47 |
| Msa0605250 | Msa0676100 | 0.835564 | 1.559722e-56 | -8.615850e-47 |
| Msa0618520 | Msa0676100 | 0.836041 | 1.180258e-56 | -8.615850e-47 |
| Msa0624040 | Msa0676100 | 0.845820 | 3.199859e-59 | -8.615850e-47 |
| Msa0628100 | Msa0676100 | 0.858136 | 1.013003e-62 | -8.615850e-47 |
| Msa0646190 | Msa0676100 | 0.811831 | 5.751775e-51 | -8.615850e-47 |
| Msa0649310 | Msa0676100 | 0.847276 | 1.281146e-59 | -8.615850e-47 |
| Msa0650650 | Msa0676100 | 0.815521 | 8.860602e-52 | -8.615850e-47 |
| Msa0650740 | Msa0676100 | 0.811423 | 7.052883e-51 | -8.615850e-47 |
| Msa0651400 | Msa0676100 | 0.821349 | 4.233649e-53 | -8.615850e-47 |
| Msa0658650 | Msa0676100 | 0.806226 | 9.116590e-50 | -8.615850e-47 |
| Msa0659890 | Msa0676100 | 0.801301 | 9.606535e-49 | -8.615850e-47 |
| Msa0665790 | Msa0676100 | 0.817138 | 3.852268e-52 | -8.615850e-47 |
| Msa0672120 | Msa0676100 | 0.808118 | 3.623364e-50 | -8.615850e-47 |
| Msa0675010 | Msa0676100 | 0.810044 | 1.401497e-50 | -8.615850e-47 |
| Msa0676100 | Msa0679780 | 0.817029 | 4.075794e-52 | -8.615850e-47 |
| Msa0676100 | Msa0681210 | 0.824277 | 8.804706e-54 | -8.615850e-47 |
| Msa0676100 | Msa0706600 | 0.813541 | 2.429262e-51 | -8.615850e-47 |
| Msa0676100 | Msa0714600 | 0.821796 | 3.336903e-53 | -8.615850e-47 |
| Msa0676100 | Msa0755090 | 0.819588 | 1.073255e-52 | -8.615850e-47 |
| Msa0676100 | Msa0760890 | 0.806718 | 7.178339e-50 | -8.615850e-47 |
| Msa0676100 | Msa0768490 | 0.802072 | 6.673423e-49 | -8.615850e-47 |
| Msa0676100 | Msa0790640 | 0.846511 | 2.075134e-59 | -8.615850e-47 |
| Msa0676100 | Msa0797000 | 0.803502 | 3.380677e-49 | -8.615850e-47 |
| Msa0676100 | Msa0801360 | 0.805378 | 1.373939e-49 | -8.615850e-47 |
| Msa0676100 | Msa0804120 | 0.807971 | 3.895422e-50 | -8.615850e-47 |
| Msa0676100 | Msa0806720 | 0.820075 | 8.307080e-53 | -8.615850e-47 |
| Msa0676100 | Msa0806760 | 0.824108 | 9.650642e-54 | -8.615850e-47 |
| Msa0676100 | Msa0812970 | 0.811252 | 7.682937e-51 | -8.615850e-47 |
| Msa0676100 | Msa0818440 | 0.807652 | 4.553429e-50 | -8.615850e-47 |
| Msa0676100 | Msa0818550 | 0.812930 | 3.308459e-51 | -8.615850e-47 |
| Msa0676100 | Msa0828570 | 0.863674 | 2.102520e-64 | -8.615850e-47 |
| Msa0676100 | Msa0830720 | 0.806670 | 7.348451e-50 | -8.615850e-47 |
| Msa0676100 | Msa0834460 | 0.810754 | 9.850589e-51 | -8.615850e-47 |
| Msa0676100 | Msa0839830 | 0.807178 | 5.739010e-50 | -8.615850e-47 |
| Msa0676100 | Msa0847200 | 0.803687 | 3.094548e-49 | -8.615850e-47 |
| Msa0676100 | Msa0853480 | 0.814681 | 1.361265e-51 | -8.615850e-47 |
| Msa0676100 | Msa0861800 | 0.801771 | 7.693883e-49 | -8.615850e-47 |
| Msa0676100 | Msa0899700 | 0.824891 | 6.311337e-54 | -8.615850e-47 |
| Msa0676100 | Msa0944690 | 0.830672 | 2.574027e-55 | -8.615850e-47 |
| Msa0676100 | Msa0945960 | 0.820010 | 8.594441e-53 | -8.615850e-47 |
| Msa0676100 | Msa0964680 | 0.831678 | 1.456560e-55 | -8.615850e-47 |
| Msa0676100 | Msa0968780 | 0.813634 | 2.317286e-51 | -8.615850e-47 |
| Msa0676100 | Msa0971860 | 0.815955 | 7.089035e-52 | -8.615850e-47 |
| Msa0676100 | Msa0984000 | 0.857823 | 1.255304e-62 | -8.615850e-47 |
| Msa0676100 | Msa1004210 | 0.847649 | 1.011498e-59 | -8.615850e-47 |
| Msa0676100 | Msa1004260 | 0.817566 | 3.085568e-52 | -8.615850e-47 |
| Msa0676100 | Msa1014350 | 0.822156 | 2.753396e-53 | -8.615850e-47 |
| Msa0676100 | Msa1030870 | 0.802301 | 5.986897e-49 | -8.615850e-47 |
| Msa0676100 | Msa1036250 | 0.805544 | 1.268002e-49 | -8.615850e-47 |
| Msa0676100 | Msa1038320 | 0.805256 | 1.457222e-49 | -8.615850e-47 |
| Msa0676100 | Msa1046610 | 0.849083 | 4.059841e-60 | -8.615850e-47 |
| Msa0676100 | Msa1055360 | 0.840287 | 9.520445e-58 | -8.615850e-47 |
| Msa0676100 | Msa1076520 | 0.803259 | 3.796337e-49 | -8.615850e-47 |
| Msa0676100 | Msa1082150 | 0.823126 | 1.638490e-53 | -8.615850e-47 |
| Msa0676100 | Msa1083740 | -0.811876 | 5.620776e-51 | -8.615850e-47 |
| Msa0676100 | Msa1093390 | 0.824995 | 5.966773e-54 | -8.615850e-47 |
| Msa0676100 | Msa1108140 | 0.801242 | 9.876791e-49 | -8.615850e-47 |
| Msa0676100 | Msa1128650 | -0.820994 | 5.111236e-53 | -8.615850e-47 |
| Msa0676100 | Msa1131180 | -0.814278 | 1.671566e-51 | -8.615850e-47 |
| Msa0676100 | Msa1144730 | 0.855994 | 4.340332e-62 | -8.615850e-47 |
| Msa0676100 | Msa1157730 | 0.812782 | 3.565221e-51 | -8.615850e-47 |
| Msa0676100 | Msa1158090 | 0.812837 | 3.468216e-51 | -8.615850e-47 |
| Msa0676100 | Msa1173380 | 0.816756 | 4.694033e-52 | -8.615850e-47 |
| Msa0676100 | Msa1177240 | 0.838435 | 2.881539e-57 | -8.615850e-47 |
| Msa0676100 | Msa1177620 | 0.821214 | 4.546659e-53 | -8.615850e-47 |
| Msa0676100 | Msa1182800 | 0.817384 | 3.391025e-52 | -8.615850e-47 |
| Msa0676100 | Msa1182830 | 0.846350 | 2.295580e-59 | -8.615850e-47 |
| Msa0676100 | Msa1187520 | 0.820876 | 5.439462e-53 | -8.615850e-47 |
| Msa0676100 | Msa1198450 | 0.808516 | 2.980881e-50 | -8.615850e-47 |
| Msa0676100 | Msa1211390 | 0.814894 | 1.220706e-51 | -8.615850e-47 |
| Msa0676100 | Msa1222030 | -0.824421 | 8.146923e-54 | -8.615850e-47 |
| Msa0676100 | Msa1229640 | 0.800350 | 1.501727e-48 | -8.615850e-47 |
| Msa0676100 | Msa1232270 | 0.829398 | 5.264144e-55 | -8.615850e-47 |
| Msa0676100 | Msa1238730 | 0.816898 | 4.361767e-52 | -8.615850e-47 |
| Msa0676100 | Msa1241820 | 0.849650 | 2.821642e-60 | -8.615850e-47 |
| Msa0676100 | Msa1245120 | -0.806805 | 6.881017e-50 | -8.615850e-47 |
| Msa0676100 | Msa1272950 | 0.825552 | 4.405137e-54 | -8.615850e-47 |
| Msa0676100 | Msa1281270 | 0.813364 | 2.657707e-51 | -8.615850e-47 |
| Msa0676100 | Msa1282920 | 0.813656 | 2.291576e-51 | -8.615850e-47 |
| Msa0676100 | Msa1293050 | 0.836219 | 1.063681e-56 | -8.615850e-47 |
| Msa0676100 | Msa1306190 | 0.865922 | 4.154316e-65 | -8.615850e-47 |
| Msa0676100 | Msa1306200 | 0.871172 | 8.365765e-67 | -8.615850e-47 |
| Msa0676100 | Msa1317030 | 0.828327 | 9.562231e-55 | -8.615850e-47 |
| Msa0676100 | Msa1317710 | 0.805268 | 1.449001e-49 | -8.615850e-47 |
| Msa0676100 | Msa1320380 | 0.823790 | 1.145763e-53 | -8.615850e-47 |
| Msa0676100 | Msa1326400 | 0.815171 | 1.059984e-51 | -8.615850e-47 |
| Msa0676100 | Msa1335970 | -0.806725 | 7.154698e-50 | -8.615850e-47 |
| Msa0676100 | Msa1349810 | 0.854114 | 1.526782e-61 | -8.615850e-47 |
| Msa0676100 | Msa1354090 | 0.838157 | 3.398291e-57 | -8.615850e-47 |
| Msa0676100 | Msa1361190 | 0.847545 | 1.080667e-59 | -8.615850e-47 |
| Msa0676100 | Msa1378460 | 0.920305 | 1.513233e-87 | -8.615850e-47 |
| Msa0676100 | Msa1378470 | 0.925508 | 1.668060e-90 | -8.615850e-47 |
| Msa0676100 | Msa1380720 | 0.801292 | 9.646792e-49 | -8.615850e-47 |
| Msa0676100 | Msa1381210 | -0.819984 | 8.713290e-53 | -8.615850e-47 |
| Msa0676100 | Msa1391490 | 0.804360 | 2.242760e-49 | -8.615850e-47 |
| Msa0676100 | Msa1394900 | 0.820578 | 6.370448e-53 | -8.615850e-47 |
| Msa0676100 | Msa1398800 | 0.803698 | 3.078882e-49 | -8.615850e-47 |
| Msa0676100 | Msa1418200 | 0.802710 | 4.930643e-49 | -8.615850e-47 |
| Msa0676100 | Msa1421870 | 0.850217 | 1.958166e-60 | -8.615850e-47 |
| Msa0676100 | Msa1422890 | 0.851405 | 9.068021e-61 | -8.615850e-47 |
| Msa0676100 | Msa1427830 | 0.809249 | 2.076978e-50 | -8.615850e-47 |
| Msa0676100 | Msa1431730 | 0.823395 | 1.417838e-53 | -8.615850e-47 |
| Msa0676100 | Msa1434660 | 0.845001 | 5.329474e-59 | -8.615850e-47 |
| Msa0676100 | Msa1439070 | 0.811437 | 7.002886e-51 | -8.615850e-47 |
| Msa0676100 | Msa1439120 | 0.826070 | 3.319570e-54 | -8.615850e-47 |
| Msa0676100 | Msa1440220 | 0.830512 | 2.817327e-55 | -8.615850e-47 |
| Msa0676100 | Msa1450020 | 0.817606 | 3.022373e-52 | -8.615850e-47 |
| Msa0676100 | Msa1450980 | 0.813113 | 3.017353e-51 | -8.615850e-47 |
| Msa0676100 | Msa1454110 | 0.802746 | 4.847798e-49 | -8.615850e-47 |
| Msa0676100 | Msa1455660 | 0.824648 | 7.203713e-54 | -8.615850e-47 |
| Msa0676100 | Msa1459540 | 0.802573 | 5.262599e-49 | -8.615850e-47 |
| Msa0676100 | Msa1466350 | 0.805146 | 1.537003e-49 | -8.615850e-47 |
| Msa0138390 | Msa0676100 | -0.801556 | 8.516559e-49 | -8.615850e-47 |
| Msa0140290 | Msa0676100 | 0.802485 | 5.485993e-49 | -8.615850e-47 |
| Msa0142420 | Msa0676100 | 0.803101 | 4.092843e-49 | -8.615850e-47 |
| Msa0154180 | Msa0676100 | 0.810122 | 1.348420e-50 | -8.615850e-47 |
| Msa0154200 | Msa0676100 | 0.810378 | 1.187689e-50 | -8.615850e-47 |
| Msa0154220 | Msa0676100 | 0.815920 | 7.220720e-52 | -8.615850e-47 |
| Msa0154240 | Msa0676100 | 0.860255 | 2.346468e-63 | -8.615850e-47 |
| Msa0154270 | Msa0676100 | 0.867211 | 1.618035e-65 | -8.615850e-47 |
| Msa0155610 | Msa0676100 | 0.886744 | 2.619053e-72 | -8.615850e-47 |
| Msa0159750 | Msa0676100 | 0.849022 | 4.222475e-60 | -8.615850e-47 |
| Msa0171920 | Msa0676100 | 0.803376 | 3.590750e-49 | -8.615850e-47 |
| Msa0182930 | Msa0676100 | 0.838727 | 2.422232e-57 | -8.615850e-47 |
| Msa0183560 | Msa0676100 | 0.842859 | 1.999179e-58 | -8.615850e-47 |
| Msa0185340 | Msa0676100 | -0.805871 | 1.082916e-49 | -8.615850e-47 |
| Msa0198440 | Msa0676100 | 0.833924 | 4.032568e-56 | -8.615850e-47 |
| Msa0200840 | Msa0676100 | 0.802249 | 6.137509e-49 | -8.615850e-47 |
| Msa0212730 | Msa0676100 | 0.811919 | 5.503472e-51 | -8.615850e-47 |
| Msa0216210 | Msa0676100 | 0.845055 | 5.154215e-59 | -8.615850e-47 |
| Msa0224370 | Msa0676100 | 0.834522 | 2.855259e-56 | -8.615850e-47 |
| Msa0224400 | Msa0676100 | 0.821420 | 4.075738e-53 | -8.615850e-47 |
| Msa0366870 | Msa0676100 | 0.805436 | 1.336486e-49 | -8.615850e-47 |
| Msa0377280 | Msa0676100 | 0.848736 | 5.067887e-60 | -8.615850e-47 |
| Msa0380650 | Msa0676100 | 0.803905 | 2.789328e-49 | -8.615850e-47 |
| Msa0382590 | Msa0676100 | 0.844487 | 7.332191e-59 | -8.615850e-47 |
| Msa0389060 | Msa0676100 | 0.833338 | 5.649549e-56 | -8.615850e-47 |
| Msa0392050 | Msa0676100 | 0.854604 | 1.101725e-61 | -8.615850e-47 |
| Msa0401340 | Msa0676100 | 0.873804 | 1.106729e-67 | -8.615850e-47 |
| Msa0404690 | Msa0676100 | 0.852892 | 3.425740e-61 | -8.615850e-47 |
| Msa0412190 | Msa0676100 | 0.802093 | 6.607306e-49 | -8.615850e-47 |
| Msa0418430 | Msa0676100 | 0.855041 | 8.231571e-62 | -8.615850e-47 |
| Msa0430290 | Msa0676100 | 0.803033 | 4.229149e-49 | -8.615850e-47 |
| Msa0431520 | Msa0676100 | 0.805374 | 1.376785e-49 | -8.615850e-47 |
| Msa0431830 | Msa0676100 | 0.808599 | 2.861267e-50 | -8.615850e-47 |
| Msa0432720 | Msa0676100 | 0.827626 | 1.410349e-54 | -8.615850e-47 |
| Msa0448080 | Msa0676100 | 0.847749 | 9.497603e-60 | -8.615850e-47 |
| Msa0448120 | Msa0676100 | 0.879804 | 9.240924e-70 | -8.615850e-47 |
| Msa0462590 | Msa0676100 | 0.867171 | 1.665623e-65 | -8.615850e-47 |
| Msa0465800 | Msa0676100 | 0.865231 | 6.859635e-65 | -8.615850e-47 |
| Msa0469950 | Msa0676100 | 0.854059 | 1.584133e-61 | -8.615850e-47 |
| Msa0472740 | Msa0676100 | 0.871728 | 5.478734e-67 | -8.615850e-47 |
| Msa0481490 | Msa0676100 | 0.816250 | 6.090749e-52 | -8.615850e-47 |
| Msa0242290 | Msa0676100 | 0.818455 | 1.943277e-52 | -8.615850e-47 |
| Msa0243470 | Msa0676100 | 0.804788 | 1.825487e-49 | -8.615850e-47 |
| Msa0253160 | Msa0676100 | 0.814602 | 1.417357e-51 | -8.615850e-47 |
| Msa0260190 | Msa0676100 | 0.867686 | 1.139838e-65 | -8.615850e-47 |
| Msa0261970 | Msa0676100 | 0.806963 | 6.372822e-50 | -8.615850e-47 |
| Msa0265580 | Msa0676100 | 0.860693 | 1.728914e-63 | -8.615850e-47 |
| Msa0265980 | Msa0676100 | -0.808561 | 2.916116e-50 | -8.615850e-47 |
| Msa0278670 | Msa0676100 | 0.830227 | 3.306132e-55 | -8.615850e-47 |
| Msa0281940 | Msa0676100 | 0.826216 | 3.063248e-54 | -8.615850e-47 |
| Msa0282170 | Msa0676100 | 0.829975 | 3.810333e-55 | -8.615850e-47 |
| Msa0288240 | Msa0676100 | 0.809498 | 1.837240e-50 | -8.615850e-47 |
| Msa0291940 | Msa0676100 | 0.812606 | 3.895901e-51 | -8.615850e-47 |
| Msa0295570 | Msa0676100 | 0.821637 | 3.632562e-53 | -8.615850e-47 |
| Msa0303440 | Msa0676100 | 0.861682 | 8.641988e-64 | -8.615850e-47 |
| Msa0303500 | Msa0676100 | 0.846824 | 1.703347e-59 | -8.615850e-47 |
| Msa0318070 | Msa0676100 | 0.832000 | 1.213366e-55 | -8.615850e-47 |
| Msa0318270 | Msa0676100 | 0.819228 | 1.296654e-52 | -8.615850e-47 |
| Msa0318310 | Msa0676100 | 0.821246 | 4.470786e-53 | -8.615850e-47 |
| Msa0326670 | Msa0676100 | 0.803943 | 2.738054e-49 | -8.615850e-47 |
| Msa0341190 | Msa0676100 | 0.801081 | 1.065464e-48 | -8.615850e-47 |
| Msa0344680 | Msa0676100 | 0.851785 | 7.078214e-61 | -8.615850e-47 |
| Msa0354390 | Msa0676100 | 0.865792 | 4.565318e-65 | -8.615850e-47 |
| Msa0357380 | Msa0676100 | 0.837681 | 4.502171e-57 | -8.615850e-47 |
| Msa0357390 | Msa0676100 | 0.843411 | 1.424367e-58 | -8.615850e-47 |
| Msa0358290 | Msa0676100 | 0.845892 | 3.059265e-59 | -8.615850e-47 |
| Msa0486530 | Msa0676100 | 0.804543 | 2.053913e-49 | -8.615850e-47 |
| Msa0487490 | Msa0676100 | 0.804805 | 1.810560e-49 | -8.615850e-47 |
| Msa0525270 | Msa0676100 | 0.836181 | 1.087634e-56 | -8.615850e-47 |
| Msa0525280 | Msa0676100 | 0.833328 | 5.679655e-56 | -8.615850e-47 |
| Msa0530340 | Msa0676100 | 0.812775 | 3.578626e-51 | -8.615850e-47 |
| Msa0530950 | Msa0676100 | 0.857013 | 2.178793e-62 | -8.615850e-47 |
| Msa0545230 | Msa0676100 | 0.829489 | 5.001619e-55 | -8.615850e-47 |
| Msa0546080 | Msa0676100 | 0.834458 | 2.963164e-56 | -8.615850e-47 |
| Msa0549540 | Msa0676100 | 0.823008 | 1.744872e-53 | -8.615850e-47 |
| Msa0568610 | Msa0676100 | 0.834453 | 2.971846e-56 | -8.615850e-47 |
| Msa0570680 | Msa0676100 | 0.815839 | 7.527327e-52 | -8.615850e-47 |
| Msa0577230 | Msa0676100 | 0.806212 | 9.179928e-50 | -8.615850e-47 |
| Msa0579340 | Msa0676100 | 0.824117 | 9.601047e-54 | -8.615850e-47 |
| Msa0583740 | Msa0676100 | 0.832292 | 1.027093e-55 | -8.615850e-47 |
| Msa0584280 | Msa0676100 | 0.857193 | 1.927847e-62 | -8.615850e-47 |
| Msa0593810 | Msa0676100 | 0.827445 | 1.558368e-54 | -8.615850e-47 |
| Msa0600820 | Msa0676100 | 0.836385 | 9.653060e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676100 | MtrunA17_Chr4g0019521 | 61.538 | 117 | 6 | 1 | 3 | 80 | 2 | 118 | 3.19e-44 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676100 | AT3G52070.2 | 74.359 | 39 | 9 | 1 | 34 | 71 | 66 | 104 | 1.87e-13 | 60.8 |
| Msa0676100 | AT3G52070.1 | 74.359 | 39 | 9 | 1 | 34 | 71 | 66 | 104 | 3.06e-13 | 60.1 |
Find 20 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACTCTTGGTATAGAATT+AGG | 0.267818 | 4_4:-26309009 | Msa0676100:CDS |
| CTTCTACCTTGGCAAGATAA+TGG | 0.344639 | 4_4:+26308974 | None:intergenic |
| GTCCACAACAAAAGGGTGAT+TGG | 0.404912 | 4_4:-26304415 | Msa0676100:CDS |
| GTATAGAATTAGGACCCCTT+TGG | 0.412469 | 4_4:-26308999 | Msa0676100:CDS |
| AATAAGCACATACTAACTTC+TGG | 0.421785 | 4_4:+26304342 | None:intergenic |
| GAATTTAAGTCCACAACAAA+AGG | 0.428735 | 4_4:-26304423 | Msa0676100:CDS |
| AACTACCATACATGTACATT+AGG | 0.446681 | 4_4:+26304302 | None:intergenic |
| ATAAGCACATACTAACTTCT+GGG | 0.459372 | 4_4:+26304343 | None:intergenic |
| AAATTCTTCATCTCTTGTTG+TGG | 0.464351 | 4_4:+26304440 | None:intergenic |
| TAGTATGTGCTTATTGTGCT+TGG | 0.469587 | 4_4:-26304334 | Msa0676100:CDS |
| CACTCACCATTAGCCACTCT+TGG | 0.472156 | 4_4:-26309021 | Msa0676100:CDS |
| TCTATACCAAGAGTGGCTAA+TGG | 0.502607 | 4_4:+26309015 | None:intergenic |
| CTATGCCTAATGTACATGTA+TGG | 0.513001 | 4_4:-26304307 | Msa0676100:CDS |
| GGCAAGATAATGGAACCAAA+GGG | 0.513637 | 4_4:+26308984 | None:intergenic |
| TTTGAGAAGCTAATTGGAAG+AGG | 0.531335 | 4_4:-26304463 | Msa0676100:intron |
| TTGGTTCCATTATCTTGCCA+AGG | 0.539176 | 4_4:-26308980 | Msa0676100:intron |
| TGGCAAGATAATGGAACCAA+AGG | 0.571857 | 4_4:+26308983 | None:intergenic |
| TCCTAATTCTATACCAAGAG+TGG | 0.590163 | 4_4:+26309008 | None:intergenic |
| AATTTAAGTCCACAACAAAA+GGG | 0.599106 | 4_4:-26304422 | Msa0676100:CDS |
| GCAAGATAATGGAACCAAAG+GGG | 0.711481 | 4_4:+26308985 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACATTAAATAATAAAATA+TGG | - | chr4_4:26306346-26306365 | Msa0676100:intron | 10.0% |
| !!! | ATGTTATATTTTTTATGTAA+AGG | - | chr4_4:26306926-26306945 | Msa0676100:intron | 10.0% |
| !!! | TGTTATATTTTTTATGTAAA+GGG | - | chr4_4:26306927-26306946 | Msa0676100:intron | 10.0% |
| !! | TCTATTTAATATTTAGCATA+AGG | - | chr4_4:26304606-26304625 | Msa0676100:intron | 15.0% |
| !! | GGAATAAAATTCAATTAAAA+AGG | - | chr4_4:26304753-26304772 | Msa0676100:intron | 15.0% |
| !! | CATTCTAAATAGATTTAATT+TGG | + | chr4_4:26304992-26305011 | None:intergenic | 15.0% |
| !! | AATAAGTTATTCCAAATTAT+TGG | + | chr4_4:26305038-26305057 | None:intergenic | 15.0% |
| !! | ACTATATATTCATATTAAGT+AGG | + | chr4_4:26305547-26305566 | None:intergenic | 15.0% |
| !!! | AATTATGAAAGTATTTAACA+TGG | - | chr4_4:26305983-26306002 | Msa0676100:intron | 15.0% |
| !! | ATCGATAATAATTAAGATAA+TGG | - | chr4_4:26307307-26307326 | Msa0676100:intron | 15.0% |
| !! | ATGTAAATGTTATATGTATT+AGG | - | chr4_4:26308675-26308694 | Msa0676100:intron | 15.0% |
| !! | AAATATACATTTAACATCAA+GGG | + | chr4_4:26308795-26308814 | None:intergenic | 15.0% |
| !! | AAAATATACATTTAACATCA+AGG | + | chr4_4:26308796-26308815 | None:intergenic | 15.0% |
| !!! | ATGCTCTTTTTATTAACAAA+TGG | - | chr4_4:26304732-26304751 | Msa0676100:intron | 20.0% |
| !! | TTAAGAACTAATTCAAACAT+AGG | - | chr4_4:26304798-26304817 | Msa0676100:intron | 20.0% |
| !!! | GTTATTGATTGATATCAATT+TGG | + | chr4_4:26305153-26305172 | None:intergenic | 20.0% |
| !! | ATATCTCAGAAAATGTATAA+TGG | + | chr4_4:26305223-26305242 | None:intergenic | 20.0% |
| !!! | TCTCTTCTTTTGATAAATTA+TGG | - | chr4_4:26305758-26305777 | Msa0676100:intron | 20.0% |
| !!! | CTTGTATAAAAAAAGTATGA+CGG | - | chr4_4:26306020-26306039 | Msa0676100:intron | 20.0% |
| !! | ATTTCTAATTGGAATAAGAT+TGG | - | chr4_4:26306059-26306078 | Msa0676100:intron | 20.0% |
| !! | AATATAACATCTAGCAATTA+TGG | + | chr4_4:26306916-26306935 | None:intergenic | 20.0% |
| !! | ATTTAGTGAAAAACAAACAA+GGG | - | chr4_4:26307011-26307030 | Msa0676100:intron | 20.0% |
| !!! | TTAAGATAATGGAATATTGA+AGG | - | chr4_4:26307318-26307337 | Msa0676100:intron | 20.0% |
| !! | AATTAATGCTTGTATTCATT+TGG | + | chr4_4:26307712-26307731 | None:intergenic | 20.0% |
| !! | TAATTGTTAAGTGCAAATTA+TGG | + | chr4_4:26307862-26307881 | None:intergenic | 20.0% |
| !! | CTTAACAATTACAAGTAAAA+AGG | - | chr4_4:26307871-26307890 | Msa0676100:intron | 20.0% |
| !!! | AGATAATTTCTTTTTGTGTT+TGG | + | chr4_4:26307916-26307935 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTATCGAATTTGA+AGG | + | chr4_4:26308218-26308237 | None:intergenic | 20.0% |
| !! | AAATACAAACACTCAAAATT+AGG | - | chr4_4:26308239-26308258 | Msa0676100:intron | 20.0% |
| !! | TATGAACACTTCTTAAATTA+CGG | - | chr4_4:26308414-26308433 | Msa0676100:intron | 20.0% |
| !! | AATATACATTTAACATCAAG+GGG | + | chr4_4:26308794-26308813 | None:intergenic | 20.0% |
| !!! | AAATGTATATTTTGTAGTAG+TGG | - | chr4_4:26308803-26308822 | Msa0676100:intron | 20.0% |
| ! | ATAATAGATTTCACATCAGT+GGG | + | chr4_4:26304694-26304713 | None:intergenic | 25.0% |
| ! | AATAATAGATTTCACATCAG+TGG | + | chr4_4:26304695-26304714 | None:intergenic | 25.0% |
| !! | AAAAAGGTTATTTAAAGTGC+AGG | - | chr4_4:26304769-26304788 | Msa0676100:intron | 25.0% |
| ! | GAACTCATTATTGAAATTGT+TGG | + | chr4_4:26304826-26304845 | None:intergenic | 25.0% |
| !! | TATTAGTTTATCATCTGGAT+CGG | + | chr4_4:26304901-26304920 | None:intergenic | 25.0% |
| !! | GTTGATATTAGTTTATCATC+TGG | + | chr4_4:26304946-26304965 | None:intergenic | 25.0% |
| ! | ACAAAAACCAATTCATTTCT+AGG | - | chr4_4:26304964-26304983 | Msa0676100:intron | 25.0% |
| ! | CAAAAACCAATTCATTTCTA+GGG | - | chr4_4:26304965-26304984 | Msa0676100:intron | 25.0% |
| ! | AGAGAAACAAACCAATAATT+TGG | - | chr4_4:26305024-26305043 | Msa0676100:intron | 25.0% |
| ! | GATATCAATTTGGTTATGTT+GGG | + | chr4_4:26305143-26305162 | None:intergenic | 25.0% |
| ! | TGATATCAATTTGGTTATGT+TGG | + | chr4_4:26305144-26305163 | None:intergenic | 25.0% |
| !! | TTAATGTTGTTGTCTTTTTG+CGG | + | chr4_4:26305314-26305333 | None:intergenic | 25.0% |
| ! | TTATGTAAGACTTCTCTATA+AGG | - | chr4_4:26305497-26305516 | Msa0676100:intron | 25.0% |
| ! | AATGAATGAATACATCCTAT+TGG | - | chr4_4:26305520-26305539 | Msa0676100:intron | 25.0% |
| !! | AAGTTTTTGAACTTACAAAG+AGG | - | chr4_4:26305600-26305619 | Msa0676100:intron | 25.0% |
| !! | TAAAAAAAGTATGACGGAAA+TGG | - | chr4_4:26306026-26306045 | Msa0676100:intron | 25.0% |
| !! | GCAAGATTTTCATTTCTAAT+TGG | - | chr4_4:26306048-26306067 | Msa0676100:intron | 25.0% |
| !! | AATATATTTTCTTTCACACC+TGG | + | chr4_4:26306127-26306146 | None:intergenic | 25.0% |
| ! | AATGGCTAGAATTAATGTTT+GGG | + | chr4_4:26306304-26306323 | None:intergenic | 25.0% |
| ! | TAACTATCATAAGAATCTGT+TGG | - | chr4_4:26306420-26306439 | Msa0676100:intron | 25.0% |
| ! | AAATTGAAAATGAAGAGAAG+TGG | - | chr4_4:26306447-26306466 | Msa0676100:intron | 25.0% |
| ! | AATTGAAAATGAAGAGAAGT+GGG | - | chr4_4:26306448-26306467 | Msa0676100:intron | 25.0% |
| ! | TTAACACTTTCATTATTTGC+AGG | + | chr4_4:26306493-26306512 | None:intergenic | 25.0% |
| !! | TAAGTTGAATTCAATGATGA+AGG | - | chr4_4:26306750-26306769 | Msa0676100:intron | 25.0% |
| ! | TATCATTTCTATGTTCATTG+TGG | - | chr4_4:26306786-26306805 | Msa0676100:intron | 25.0% |
| ! | ATCATAACATCTAGCAATTA+CGG | + | chr4_4:26306859-26306878 | None:intergenic | 25.0% |
| ! | CATTTAGTGAAAAACAAACA+AGG | - | chr4_4:26307010-26307029 | Msa0676100:intron | 25.0% |
| ! | CATATTTATAGCTACAAACA+TGG | + | chr4_4:26307612-26307631 | None:intergenic | 25.0% |
| ! | ACCTGAAATTACATAGAAAA+AGG | - | chr4_4:26307680-26307699 | Msa0676100:intron | 25.0% |
| ! | CCTGAAATTACATAGAAAAA+GGG | - | chr4_4:26307681-26307700 | Msa0676100:intron | 25.0% |
| ! | ATTATGGAATCTGAATTGAA+TGG | + | chr4_4:26307846-26307865 | None:intergenic | 25.0% |
| !! | ATTTCTTTTTGTGTTTGGTT+TGG | + | chr4_4:26307911-26307930 | None:intergenic | 25.0% |
| ! | GAATGAAGTGATTAAAAACA+AGG | - | chr4_4:26308164-26308183 | Msa0676100:intron | 25.0% |
| ! | ACATATAACATTTACATCAG+TGG | + | chr4_4:26308672-26308691 | None:intergenic | 25.0% |
| !!! | TTTTAATTTTCACATCAGTG+CGG | + | chr4_4:26308770-26308789 | None:intergenic | 25.0% |
| !!! | AATGATTTTGAGAAGCTAAT+TGG | - | chr4_4:26308863-26308882 | Msa0676100:intron | 25.0% |
| ! | AATTTAAGTCCACAACAAAA+GGG | - | chr4_4:26308910-26308929 | Msa0676100:intron | 25.0% |
| ! | GTCTTTCTTTTCTTCATGAT+TGG | + | chr4_4:26304401-26304420 | None:intergenic | 30.0% |
| CATGAAGAAAAGAAAGACAT+AGG | - | chr4_4:26304403-26304422 | Msa0676100:CDS | 30.0% | |
| TGATGTAAAGTGATATGATG+TGG | - | chr4_4:26304497-26304516 | Msa0676100:intron | 30.0% | |
| ! | ATTAGTTTATCATCTGGATC+GGG | + | chr4_4:26304900-26304919 | None:intergenic | 30.0% |
| ! | GTGGATATTAGTTTATCATC+TGG | + | chr4_4:26304906-26304925 | None:intergenic | 30.0% |
| TCTCAGAAAATGTATAATGG+TGG | + | chr4_4:26305220-26305239 | None:intergenic | 30.0% | |
| AAGGAACATATACTTGTGTA+TGG | + | chr4_4:26305274-26305293 | None:intergenic | 30.0% | |
| !! | GGTTTGAATTTCAGGTTAAA+AGG | + | chr4_4:26305293-26305312 | None:intergenic | 30.0% |
| TCATATTAAGTAGGACCAAT+AGG | + | chr4_4:26305538-26305557 | None:intergenic | 30.0% | |
| ATTGAAGGTAATAGTGCTAT+TGG | + | chr4_4:26305651-26305670 | None:intergenic | 30.0% | |
| AACTGGCGAAAATATATTGA+AGG | + | chr4_4:26305666-26305685 | None:intergenic | 30.0% | |
| GCTAGCTAGATAGTATTAAT+CGG | - | chr4_4:26305917-26305936 | Msa0676100:intron | 30.0% | |
| ! | CAATCAAAACTTTTCTATCC+AGG | - | chr4_4:26306106-26306125 | Msa0676100:intron | 30.0% |
| CAATGGCTAGAATTAATGTT+TGG | + | chr4_4:26306305-26306324 | None:intergenic | 30.0% | |
| ATTGTTTGTGACATAAAGCT+TGG | - | chr4_4:26306548-26306567 | Msa0676100:intron | 30.0% | |
| GAAACAAATGAGCTAAAAGA+AGG | + | chr4_4:26306584-26306603 | None:intergenic | 30.0% | |
| CGATGATGCAATATTATGAA+TGG | + | chr4_4:26306986-26307005 | None:intergenic | 30.0% | |
| ! | AACGACTGTATTTTTCATTC+TGG | + | chr4_4:26307122-26307141 | None:intergenic | 30.0% |
| ! | CTCTATCTTCATTTTCATTG+GGG | + | chr4_4:26307426-26307445 | None:intergenic | 30.0% |
| ! | GCTCTATCTTCATTTTCATT+GGG | + | chr4_4:26307427-26307446 | None:intergenic | 30.0% |
| ! | TGCTCTATCTTCATTTTCAT+TGG | + | chr4_4:26307428-26307447 | None:intergenic | 30.0% |
| TGTCATTATTGCTGGAAAAA+TGG | - | chr4_4:26307454-26307473 | Msa0676100:intron | 30.0% | |
| TTTATATCTCCAATCTTTGG+TGG | + | chr4_4:26307483-26307502 | None:intergenic | 30.0% | |
| GTGTTTATATCTCCAATCTT+TGG | + | chr4_4:26307486-26307505 | None:intergenic | 30.0% | |
| !!! | AACTTTTTGCTGTTTGTTTG+TGG | + | chr4_4:26307521-26307540 | None:intergenic | 30.0% |
| GTTCACACTGTTAAAAAGAA+AGG | - | chr4_4:26307646-26307665 | Msa0676100:intron | 30.0% | |
| ! | CCCTTTTTCTATGTAATTTC+AGG | + | chr4_4:26307684-26307703 | None:intergenic | 30.0% |
| ! | ATCGATTCAGTTAAAGATGA+CGG | - | chr4_4:26308090-26308109 | Msa0676100:intron | 30.0% |
| GAAAAACGAGATCTAGAAAT+TGG | - | chr4_4:26308287-26308306 | Msa0676100:intron | 30.0% | |
| TCAGTGGATAATTGAAATGA+GGG | + | chr4_4:26308656-26308675 | None:intergenic | 30.0% | |
| ATCAGTGGATAATTGAAATG+AGG | + | chr4_4:26308657-26308676 | None:intergenic | 30.0% | |
| ! | CAATGTATATCTTTTCCTTC+AGG | - | chr4_4:26308738-26308757 | Msa0676100:intron | 30.0% |
| AAATTCTTCATCTCTTGTTG+TGG | + | chr4_4:26308895-26308914 | None:intergenic | 30.0% | |
| GAATTTAAGTCCACAACAAA+AGG | - | chr4_4:26308909-26308928 | Msa0676100:intron | 30.0% | |
| ATAAGCACATACTAACTTCT+GGG | + | chr4_4:26308992-26309011 | None:intergenic | 30.0% | |
| AATAAGCACATACTAACTTC+TGG | + | chr4_4:26308993-26309012 | None:intergenic | 30.0% | |
| TCCTAATTCTATACCAAGAG+TGG | + | chr4_4:26304327-26304346 | None:intergenic | 35.0% | |
| GAAGAAAAGAAAGACATAGG+AGG | - | chr4_4:26304406-26304425 | Msa0676100:CDS | 35.0% | |
| ! | GTTATTTAAAGTGCAGGCTT+TGG | - | chr4_4:26304775-26304794 | Msa0676100:intron | 35.0% |
| !!! | GGCAATGTTGTTGATTTTGA+AGG | + | chr4_4:26304848-26304867 | None:intergenic | 35.0% |
| AGTGTCATCTTTGTACATGT+AGG | + | chr4_4:26304869-26304888 | None:intergenic | 35.0% | |
| TTTGGTCCCTAGAAATGAAT+TGG | + | chr4_4:26304974-26304993 | None:intergenic | 35.0% | |
| GAACATATACTTGTGTATGG+TGG | + | chr4_4:26305271-26305290 | None:intergenic | 35.0% | |
| ! | CTTTTTGCGGTTTGAATTTC+AGG | + | chr4_4:26305301-26305320 | None:intergenic | 35.0% |
| TATCCAAGATTTCTTGTCTC+TGG | + | chr4_4:26305626-26305645 | None:intergenic | 35.0% | |
| AAGAGAACTTGAAATTCAGC+TGG | + | chr4_4:26305729-26305748 | None:intergenic | 35.0% | |
| !! | AGCTGAATTTCAAGTTCTCT+TGG | - | chr4_4:26305728-26305747 | Msa0676100:intron | 35.0% |
| GGATTCATTACAAATCATGC+AGG | - | chr4_4:26305938-26305957 | Msa0676100:intron | 35.0% | |
| TGAAGAGGATATTAGGACAA+TGG | + | chr4_4:26306197-26306216 | None:intergenic | 35.0% | |
| CATCAGATGAAGAGGATATT+AGG | + | chr4_4:26306204-26306223 | None:intergenic | 35.0% | |
| ! | AGTTTTCTCATCAGATGAAG+AGG | + | chr4_4:26306212-26306231 | None:intergenic | 35.0% |
| !! | TAATAGAAGTTCTGAGACTG+AGG | + | chr4_4:26306244-26306263 | None:intergenic | 35.0% |
| AAATTCTGATGACAAGGTTC+TGG | + | chr4_4:26306269-26306288 | None:intergenic | 35.0% | |
| AAGGGATCAGGAATGATTTA+AGG | - | chr4_4:26306383-26306402 | Msa0676100:intron | 35.0% | |
| AGGGATCAGGAATGATTTAA+GGG | - | chr4_4:26306384-26306403 | Msa0676100:intron | 35.0% | |
| TATCATGTATGTGTGTTCTC+AGG | - | chr4_4:26306695-26306714 | Msa0676100:intron | 35.0% | |
| ACTAGGATTGCTTGTATTCA+TGG | + | chr4_4:26307207-26307226 | None:intergenic | 35.0% | |
| !!! | TAGTTGCTGACTCTTCTTTT+GGG | + | chr4_4:26307238-26307257 | None:intergenic | 35.0% |
| !!! | ATAGTTGCTGACTCTTCTTT+TGG | + | chr4_4:26307239-26307258 | None:intergenic | 35.0% |
| TATCGATGTTGACATGTTAG+TGG | + | chr4_4:26307294-26307313 | None:intergenic | 35.0% | |
| CAGAGTTATGTCATTATTGC+TGG | - | chr4_4:26307446-26307465 | Msa0676100:intron | 35.0% | |
| !! | CTCTATCACTGACTTGAATT+TGG | - | chr4_4:26307545-26307564 | Msa0676100:intron | 35.0% |
| TAGCTACAAACATGGTTCAA+AGG | + | chr4_4:26307604-26307623 | None:intergenic | 35.0% | |
| TTTAACAGTGTGAACAAGCA+CGG | + | chr4_4:26307641-26307660 | None:intergenic | 35.0% | |
| AATGCTAGCAGATGTTCATA+GGG | + | chr4_4:26307745-26307764 | None:intergenic | 35.0% | |
| AAATGCTAGCAGATGTTCAT+AGG | + | chr4_4:26307746-26307765 | None:intergenic | 35.0% | |
| CAGGTTTATGTTGTGTACAT+GGG | + | chr4_4:26307817-26307836 | None:intergenic | 35.0% | |
| ACAGGTTTATGTTGTGTACA+TGG | + | chr4_4:26307818-26307837 | None:intergenic | 35.0% | |
| !! | TTTGTGTTTGGTTTGGTAGT+TGG | + | chr4_4:26307904-26307923 | None:intergenic | 35.0% |
| TGCTGTGAGATCTATGAAAA+TGG | - | chr4_4:26308382-26308401 | Msa0676100:intron | 35.0% | |
| TTAGGGTTATGTGTTATGAG+AGG | - | chr4_4:26308514-26308533 | Msa0676100:intron | 35.0% | |
| GTGAGAGAGAAAACGAATTA+AGG | - | chr4_4:26308573-26308592 | Msa0676100:intron | 35.0% | |
| CAGTGGATAATTGAAATGAG+GGG | + | chr4_4:26308655-26308674 | None:intergenic | 35.0% | |
| AGTTGACATAAACACATGAG+GGG | + | chr4_4:26308705-26308724 | None:intergenic | 35.0% | |
| CAGTTGACATAAACACATGA+GGG | + | chr4_4:26308706-26308725 | None:intergenic | 35.0% | |
| TCAGTTGACATAAACACATG+AGG | + | chr4_4:26308707-26308726 | None:intergenic | 35.0% | |
| TTTGAGAAGCTAATTGGAAG+AGG | - | chr4_4:26308869-26308888 | Msa0676100:intron | 35.0% | |
| TAGTATGTGCTTATTGTGCT+TGG | - | chr4_4:26308998-26309017 | Msa0676100:CDS | 35.0% | |
| CTATGCCTAATGTACATGTA+TGG | - | chr4_4:26309025-26309044 | Msa0676100:CDS | 35.0% | |
| TCTATACCAAGAGTGGCTAA+TGG | + | chr4_4:26304320-26304339 | None:intergenic | 40.0% | |
| GCCACTCTTGGTATAGAATT+AGG | - | chr4_4:26304323-26304342 | Msa0676100:CDS | 40.0% | |
| GTATAGAATTAGGACCCCTT+TGG | - | chr4_4:26304333-26304352 | Msa0676100:CDS | 40.0% | |
| !! | GCAAGATAATGGAACCAAAG+GGG | + | chr4_4:26304350-26304369 | None:intergenic | 40.0% |
| !! | GGCAAGATAATGGAACCAAA+GGG | + | chr4_4:26304351-26304370 | None:intergenic | 40.0% |
| !! | TGGCAAGATAATGGAACCAA+AGG | + | chr4_4:26304352-26304371 | None:intergenic | 40.0% |
| TTGGTTCCATTATCTTGCCA+AGG | - | chr4_4:26304352-26304371 | Msa0676100:CDS | 40.0% | |
| CTTCTACCTTGGCAAGATAA+TGG | + | chr4_4:26304361-26304380 | None:intergenic | 40.0% | |
| TGATTGGAGTTAGAGATGCA+TGG | + | chr4_4:26304385-26304404 | None:intergenic | 40.0% | |
| AAGAAAGACATAGGAGGAAG+AGG | - | chr4_4:26304412-26304431 | Msa0676100:CDS | 40.0% | |
| !!! | TGAAAAGCACTTTTCGCATC+AGG | - | chr4_4:26304467-26304486 | Msa0676100:intron | 40.0% |
| ! | TGTCCACATCTTTTCACATC+AGG | - | chr4_4:26304522-26304541 | Msa0676100:intron | 40.0% |
| GTACCTGATGTGAAAAGATG+TGG | + | chr4_4:26304528-26304547 | None:intergenic | 40.0% | |
| CATATACTTGTGTATGGTGG+TGG | + | chr4_4:26305268-26305287 | None:intergenic | 40.0% | |
| TGACGAACGAATTTGAGAAG+AGG | - | chr4_4:26305420-26305439 | Msa0676100:intron | 40.0% | |
| GACGAACGAATTTGAGAAGA+GGG | - | chr4_4:26305421-26305440 | Msa0676100:intron | 40.0% | |
| AGAGGATATTAGGACAATGG+TGG | + | chr4_4:26306194-26306213 | None:intergenic | 40.0% | |
| GCAGCAAAATTCTGATGACA+AGG | + | chr4_4:26306275-26306294 | None:intergenic | 40.0% | |
| TATGGAGCTGAAGTGTAAGA+AGG | - | chr4_4:26306364-26306383 | Msa0676100:intron | 40.0% | |
| ATGGAGCTGAAGTGTAAGAA+GGG | - | chr4_4:26306365-26306384 | Msa0676100:intron | 40.0% | |
| CAGGTCATATCTTACATCAG+AGG | + | chr4_4:26306474-26306493 | None:intergenic | 40.0% | |
| AACAAACAAGGGTTATCACG+TGG | - | chr4_4:26307022-26307041 | Msa0676100:intron | 40.0% | |
| GCAAGTGTGACTAAATACAG+AGG | - | chr4_4:26307077-26307096 | Msa0676100:intron | 40.0% | |
| GTTGGATTATCGATGTTCGA+TGG | + | chr4_4:26307149-26307168 | None:intergenic | 40.0% | |
| TTGAAGGTAACCACATGTGT+CGG | - | chr4_4:26307334-26307353 | Msa0676100:intron | 40.0% | |
| TTAACAGTGTGAACAAGCAC+GGG | + | chr4_4:26307640-26307659 | None:intergenic | 40.0% | |
| ATGCTAGCAGATGTTCATAG+GGG | + | chr4_4:26307744-26307763 | None:intergenic | 40.0% | |
| CTGAATTGAATGGAACTGAC+AGG | + | chr4_4:26307836-26307855 | None:intergenic | 40.0% | |
| !! | ACAAAAGTGTCCTTCTGTTG+CGG | + | chr4_4:26308015-26308034 | None:intergenic | 40.0% |
| ! | CAGAAGGACACTTTTGTTGA+TGG | - | chr4_4:26308018-26308037 | Msa0676100:intron | 40.0% |
| !! | CGTTTTTCGTGTTCTGGATT+TGG | + | chr4_4:26308275-26308294 | None:intergenic | 40.0% |
| !! | AGATCTCGTTTTTCGTGTTC+TGG | + | chr4_4:26308281-26308300 | None:intergenic | 40.0% |
| TTTCTCTTCTCTTACACGGT+GGG | + | chr4_4:26308353-26308372 | None:intergenic | 40.0% | |
| ATTTCTCTTCTCTTACACGG+TGG | + | chr4_4:26308354-26308373 | None:intergenic | 40.0% | |
| CGCATTTCTCTTCTCTTACA+CGG | + | chr4_4:26308357-26308376 | None:intergenic | 40.0% | |
| TATGTGTTATGAGAGGCGAA+AGG | - | chr4_4:26308521-26308540 | Msa0676100:intron | 40.0% | |
| ! | TTCCAATCACCCTTTTGTTG+TGG | + | chr4_4:26308922-26308941 | None:intergenic | 40.0% |
| AGATGCATGGTCTTCTACCT+TGG | + | chr4_4:26304372-26304391 | None:intergenic | 45.0% | |
| !! | AAAGCACTTTTCGCATCAGG+TGG | - | chr4_4:26304470-26304489 | Msa0676100:intron | 45.0% |
| AGTGGACGAAATGCATGATG+TGG | + | chr4_4:26304574-26304593 | None:intergenic | 45.0% | |
| !!! | GGATCGTGTTTTGATGACAG+TGG | + | chr4_4:26304925-26304944 | None:intergenic | 45.0% |
| !! | TGGTGGAAGTGTTGGATTGA+TGG | + | chr4_4:26305251-26305270 | None:intergenic | 45.0% |
| AGGCCAGAGACAAGAAATCT+TGG | - | chr4_4:26305620-26305639 | Msa0676100:intron | 45.0% | |
| AATTGCGAATGGACAGGAAC+TGG | + | chr4_4:26305683-26305702 | None:intergenic | 45.0% | |
| GTCTCAAATTGCGAATGGAC+AGG | + | chr4_4:26305689-26305708 | None:intergenic | 45.0% | |
| ! | TCGGTGTCTCAAATTGCGAA+TGG | + | chr4_4:26305694-26305713 | None:intergenic | 45.0% |
| ! | CAATTTGAGACACCGACAAC+TGG | - | chr4_4:26305698-26305717 | Msa0676100:intron | 45.0% |
| ATCCACTGAATCCTCAGATG+TGG | - | chr4_4:26306166-26306185 | Msa0676100:intron | 45.0% | |
| !! | TAGAAGTTCTGAGACTGAGG+AGG | + | chr4_4:26306241-26306260 | None:intergenic | 45.0% |
| CACAGATAGAGCGAGAACAA+TGG | + | chr4_4:26306322-26306341 | None:intergenic | 45.0% | |
| CTGAAGTGTAAGAAGGGATC+AGG | - | chr4_4:26306371-26306390 | Msa0676100:intron | 45.0% | |
| TATGTGTGTTCTCAGGTGTG+CGG | - | chr4_4:26306702-26306721 | Msa0676100:intron | 45.0% | |
| ATATGCTGCTGCAGATGAGA+TGG | + | chr4_4:26307171-26307190 | None:intergenic | 45.0% | |
| CATCTGCAGCAGCATATGAA+TGG | - | chr4_4:26307174-26307193 | Msa0676100:intron | 45.0% | |
| ! | TGTTAGTGGTAGTGTGTGTC+TGG | + | chr4_4:26307280-26307299 | None:intergenic | 45.0% |
| ! | ACTTCGCATTGATGTGTGTC+CGG | + | chr4_4:26307369-26307388 | None:intergenic | 45.0% |
| CACACATCAATGCGAAGTGT+TGG | - | chr4_4:26307371-26307390 | Msa0676100:intron | 45.0% | |
| AAATGGCAGCCACCAAAGAT+TGG | - | chr4_4:26307471-26307490 | Msa0676100:intron | 45.0% | |
| TAGCAGATGTTCATAGGGGA+AGG | + | chr4_4:26307740-26307759 | None:intergenic | 45.0% | |
| !!! | CGAGTTTTGTTCGTGAGAGA+AGG | - | chr4_4:26308053-26308072 | Msa0676100:intron | 45.0% |
| TGTTCGTGAGAGAAGGAAAG+CGG | - | chr4_4:26308060-26308079 | Msa0676100:intron | 45.0% | |
| ! | GATGACGGTTAAGCGAAAGA+CGG | - | chr4_4:26308105-26308124 | Msa0676100:intron | 45.0% |
| TAAATTACGGCGAGTGTGAG+AGG | - | chr4_4:26308427-26308446 | Msa0676100:intron | 45.0% | |
| AAATCGAGTGTGAGACGTGA+GGG | - | chr4_4:26308458-26308477 | Msa0676100:intron | 45.0% | |
| GAAATGAGGGGAAAAACACG+CGG | + | chr4_4:26308643-26308662 | None:intergenic | 45.0% | |
| TCAGTGCGGTAAATACCTGA+AGG | + | chr4_4:26308756-26308775 | None:intergenic | 45.0% | |
| GTCCACAACAAAAGGGTGAT+TGG | - | chr4_4:26308917-26308936 | Msa0676100:intron | 45.0% | |
| CACTCACCATTAGCCACTCT+TGG | - | chr4_4:26304311-26304330 | Msa0676100:CDS | 50.0% | |
| ATGCATTTCGTCCACTGACG+TGG | - | chr4_4:26304578-26304597 | Msa0676100:intron | 50.0% | |
| AATAGAGCGTACCACGTCAG+TGG | + | chr4_4:26304592-26304611 | None:intergenic | 50.0% | |
| !! | GTGTATGGTGGTGGAAGTGT+TGG | + | chr4_4:26305259-26305278 | None:intergenic | 50.0% |
| CAGCTGGATGTACCAGTTGT+CGG | + | chr4_4:26305713-26305732 | None:intergenic | 50.0% | |
| CTGAGGATTCAGTGGATCTG+AGG | + | chr4_4:26306163-26306182 | None:intergenic | 50.0% | |
| AGCCACATCTGAGGATTCAG+TGG | + | chr4_4:26306171-26306190 | None:intergenic | 50.0% | |
| !! | TCTTTTGGGTGCTCAGGACT+AGG | + | chr4_4:26307224-26307243 | None:intergenic | 50.0% |
| !! | GACTCTTCTTTTGGGTGCTC+AGG | + | chr4_4:26307230-26307249 | None:intergenic | 50.0% |
| ! | CTTCGCATTGATGTGTGTCC+GGG | + | chr4_4:26307368-26307387 | None:intergenic | 50.0% |
| TGGGTCTCGCATTCACAGAT+CGG | + | chr4_4:26308334-26308353 | None:intergenic | 50.0% | |
| GAAATCGAGTGTGAGACGTG+AGG | - | chr4_4:26308457-26308476 | Msa0676100:intron | 50.0% | |
| AGACGTGAGGGTTGAAACGA+CGG | - | chr4_4:26308470-26308489 | Msa0676100:intron | 50.0% | |
| TATGAGAGGCGAAAGGTGAG+AGG | - | chr4_4:26308528-26308547 | Msa0676100:intron | 50.0% | |
| TGAGGTGAGGAGTCTTTGAG+AGG | - | chr4_4:26308551-26308570 | Msa0676100:intron | 50.0% | |
| ! | CAATGGTGGAGCCACATCTG+AGG | + | chr4_4:26306180-26306199 | None:intergenic | 55.0% |
| TCAGGTGTGCGGTGTGTCAA+AGG | - | chr4_4:26306713-26306732 | Msa0676100:intron | 55.0% | |
| GCTGCTGCAGATGAGATGGT+TGG | + | chr4_4:26307167-26307186 | None:intergenic | 55.0% | |
| ! | GGTTCTGACACCGACACATG+TGG | + | chr4_4:26307347-26307366 | None:intergenic | 55.0% |
| !! | CATGTGTCGGTGTCAGAACC+CGG | - | chr4_4:26307347-26307366 | Msa0676100:intron | 55.0% |
| AGTGTCCTTCTGTTGCGGCT+GGG | + | chr4_4:26308010-26308029 | None:intergenic | 55.0% | |
| AAGTGTCCTTCTGTTGCGGC+TGG | + | chr4_4:26308011-26308030 | None:intergenic | 55.0% | |
| TGAGAGAAGGAAAGCGGCGA+CGG | - | chr4_4:26308066-26308085 | Msa0676100:intron | 55.0% | |
| GGCGAGTGTGAGAGGTTAGA+GGG | - | chr4_4:26308435-26308454 | Msa0676100:intron | 55.0% | |
| TGAGGGTTGAAACGACGGCA+AGG | - | chr4_4:26308475-26308494 | Msa0676100:intron | 55.0% | |
| TTGAAACGACGGCAAGGCAG+AGG | - | chr4_4:26308481-26308500 | Msa0676100:intron | 55.0% | |
| GCAGAGGTGAGGTGAGGTTA+GGG | - | chr4_4:26308497-26308516 | Msa0676100:intron | 55.0% | |
| GAAAGGTGAGAGGTGAGGTG+AGG | - | chr4_4:26308538-26308557 | Msa0676100:intron | 55.0% | |
| ATGAGGGGAAAAACACGCGG+TGG | + | chr4_4:26308640-26308659 | None:intergenic | 55.0% | |
| ACCAACCCAGCCGCAACAGA+AGG | - | chr4_4:26308002-26308021 | Msa0676100:intron | 60.0% | |
| TCCTTCTGTTGCGGCTGGGT+TGG | + | chr4_4:26308006-26308025 | None:intergenic | 60.0% | |
| CGGCGAGTGTGAGAGGTTAG+AGG | - | chr4_4:26308434-26308453 | Msa0676100:intron | 60.0% | |
| GGCAGAGGTGAGGTGAGGTT+AGG | - | chr4_4:26308496-26308515 | Msa0676100:intron | 60.0% | |
| GAGGCGAAAGGTGAGAGGTG+AGG | - | chr4_4:26308533-26308552 | Msa0676100:intron | 60.0% | |
| ACGACGGCAAGGCAGAGGTG+AGG | - | chr4_4:26308486-26308505 | Msa0676100:intron | 65.0% | |
| GGCAAGGCAGAGGTGAGGTG+AGG | - | chr4_4:26308491-26308510 | Msa0676100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 26304304 | 26309050 | 26304304 | ID=Msa0676100;Name=Msa0676100 |
| chr4_4 | mRNA | 26304304 | 26309050 | 26304304 | ID=Msa0676100-mRNA-1;Parent=Msa0676100;Name=Msa0676100-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0|0|2|0|80 |
| chr4_4 | exon | 26308981 | 26309050 | 26308981 | ID=Msa0676100-mRNA-1:exon:7050;Parent=Msa0676100-mRNA-1 |
| chr4_4 | exon | 26304304 | 26304476 | 26304304 | ID=Msa0676100-mRNA-1:exon:7049;Parent=Msa0676100-mRNA-1 |
| chr4_4 | CDS | 26308981 | 26309050 | 26308981 | ID=Msa0676100-mRNA-1:cds;Parent=Msa0676100-mRNA-1 |
| chr4_4 | CDS | 26304304 | 26304476 | 26304304 | ID=Msa0676100-mRNA-1:cds;Parent=Msa0676100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
