Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084300 | XP_003602259.1 | 83.523 | 352 | 7 | 1 | 73 | 424 | 355 | 655 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084300 | sp|P93568|SSY1_SOLTU | 63.533 | 351 | 72 | 3 | 73 | 423 | 345 | 639 | 2.79e-155 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084300 | G7J7E9 | 83.523 | 352 | 7 | 1 | 73 | 424 | 355 | 655 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070580 | Msa1084300 | 0.802098 | 6.590377e-49 | -8.615850e-47 |
| Msa0626900 | Msa1084300 | 0.822727 | 2.029031e-53 | -8.615850e-47 |
| Msa0729590 | Msa1084300 | 0.800593 | 1.340288e-48 | -8.615850e-47 |
| Msa0762390 | Msa1084300 | 0.800862 | 1.181010e-48 | -8.615850e-47 |
| Msa0822800 | Msa1084300 | 0.802597 | 5.201381e-49 | -8.615850e-47 |
| Msa0175480 | Msa1084300 | 0.801768 | 7.705602e-49 | -8.615850e-47 |
| Msa0186750 | Msa1084300 | 0.802552 | 5.315141e-49 | -8.615850e-47 |
| Msa0404330 | Msa1084300 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0417000 | Msa1084300 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0443250 | Msa1084300 | 0.800336 | 1.511978e-48 | -8.615850e-47 |
| Msa0470850 | Msa1084300 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
| Msa0472870 | Msa1084300 | 0.825707 | 4.047654e-54 | -8.615850e-47 |
| Msa1040030 | Msa1084300 | 0.806893 | 6.594070e-50 | -8.615850e-47 |
| Msa1066930 | Msa1084300 | 0.800851 | 1.187090e-48 | -8.615850e-47 |
| Msa1084300 | Msa1197210 | 0.833369 | 5.550099e-56 | -8.615850e-47 |
| Msa1084300 | Msa1199690 | 0.822469 | 2.329418e-53 | -8.615850e-47 |
| Msa1084300 | Msa1203840 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa1084300 | Msa1251890 | 0.815510 | 8.911876e-52 | -8.615850e-47 |
| Msa1084300 | Msa1267800 | 0.806294 | 8.819393e-50 | -8.615850e-47 |
| Msa1084300 | Msa1279240 | 0.818018 | 2.439341e-52 | -8.615850e-47 |
| Msa1084300 | Msa1351380 | 0.890039 | 1.411660e-73 | -8.615850e-47 |
| Msa1084300 | Msa1389990 | 0.804067 | 2.580300e-49 | -8.615850e-47 |
| Msa1084300 | Msa1454940 | 0.824368 | 8.383840e-54 | -8.615850e-47 |
| Msa0249670 | Msa1084300 | 0.800321 | 1.522711e-48 | -8.615850e-47 |
| Msa0269610 | Msa1084300 | 0.800444 | 1.437099e-48 | -8.615850e-47 |
| Msa0302020 | Msa1084300 | 0.803289 | 3.743380e-49 | -8.615850e-47 |
| Msa0516340 | Msa1084300 | 0.876009 | 1.962572e-68 | -8.615850e-47 |
| Msa0530250 | Msa1084300 | 0.803250 | 3.813580e-49 | -8.615850e-47 |
| Msa0558800 | Msa1084300 | 0.806579 | 7.682817e-50 | -8.615850e-47 |
| Msa0560010 | Msa1084300 | 0.801570 | 8.461638e-49 | -8.615850e-47 |
| Msa0880370 | Msa1084300 | 0.807292 | 5.428394e-50 | -8.615850e-47 |
| Msa0883880 | Msa1084300 | 0.816521 | 5.297783e-52 | -8.615850e-47 |
| Msa0911440 | Msa1084300 | 0.800502 | 1.398545e-48 | -8.615850e-47 |
| Msa0967250 | Msa1084300 | 0.800167 | 1.636592e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084300 | MtrunA17_Chr3g0126911 | 83.523 | 352 | 7 | 1 | 73 | 424 | 355 | 655 | 0.0 | 595 |
| Msa1084300 | MtrunA17_Chr6g0453261 | 59.193 | 223 | 86 | 2 | 77 | 294 | 469 | 691 | 1.02e-85 | 277 |
| Msa1084300 | MtrunA17_Chr8g0345941 | 46.552 | 232 | 119 | 4 | 77 | 305 | 309 | 538 | 4.99e-59 | 203 |
| Msa1084300 | MtrunA17_Chr1g0189131 | 43.111 | 225 | 123 | 4 | 77 | 298 | 301 | 523 | 9.46e-53 | 186 |
| Msa1084300 | MtrunA17_Chr4g0051911 | 32.353 | 340 | 169 | 7 | 78 | 413 | 683 | 965 | 3.63e-44 | 164 |
| Msa1084300 | MtrunA17_Chr2g0288461 | 39.655 | 232 | 125 | 7 | 86 | 310 | 828 | 1051 | 1.11e-36 | 142 |
| Msa1084300 | MtrunA17_Chr7g0250201 | 60.870 | 115 | 33 | 5 | 1 | 104 | 1 | 114 | 1.44e-29 | 118 |
| Msa1084300 | MtrunA17_Chr5g0411441 | 28.302 | 212 | 135 | 5 | 76 | 277 | 390 | 594 | 8.74e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084300 | AT5G24300.2 | 77.027 | 222 | 51 | 0 | 73 | 294 | 356 | 577 | 5.66e-126 | 379 |
| Msa1084300 | AT5G24300.2 | 64.062 | 64 | 23 | 0 | 361 | 424 | 588 | 651 | 7.24e-23 | 101 |
| Msa1084300 | AT5G24300.1 | 77.027 | 222 | 51 | 0 | 73 | 294 | 356 | 577 | 5.66e-126 | 379 |
| Msa1084300 | AT5G24300.1 | 64.062 | 64 | 23 | 0 | 361 | 424 | 588 | 651 | 7.24e-23 | 101 |
| Msa1084300 | AT3G01180.1 | 59.821 | 224 | 85 | 2 | 77 | 295 | 503 | 726 | 1.92e-88 | 285 |
| Msa1084300 | AT1G32900.1 | 46.544 | 217 | 112 | 3 | 76 | 290 | 302 | 516 | 1.13e-53 | 189 |
| Msa1084300 | AT4G18240.1 | 37.652 | 247 | 144 | 4 | 76 | 312 | 741 | 987 | 1.01e-43 | 164 |
| Msa1084300 | AT1G11720.2 | 36.861 | 274 | 140 | 10 | 62 | 320 | 783 | 1038 | 2.77e-36 | 142 |
| Msa1084300 | AT1G11720.1 | 36.861 | 274 | 140 | 10 | 62 | 320 | 731 | 986 | 2.86e-36 | 142 |
Find 120 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTACATATAGCAATT+TGG | 0.127091 | 7_2:-84587654 | Msa1084300:CDS |
| GAGGTTGGTGGTGGTGGTGC+TGG | 0.178332 | 7_2:+84588478 | None:intergenic |
| TATTCTGCCGACGACATTTC+TGG | 0.194285 | 7_2:-84586248 | Msa1084300:CDS |
| GAATCAAGTCAATACCTTTC+TGG | 0.244261 | 7_2:+84585977 | None:intergenic |
| GCAATTACATATAGCAATTT+GGG | 0.248798 | 7_2:-84587653 | Msa1084300:CDS |
| TTGTTATAAATTTCATTAAC+AGG | 0.288199 | 7_2:-84584657 | Msa1084300:CDS |
| TCATATCTGCTTTCAGCAAT+AGG | 0.289960 | 7_2:+84584233 | None:intergenic |
| AGGTTGGTGGTGGTGGTGCT+GGG | 0.313697 | 7_2:+84588479 | None:intergenic |
| GGTGGTGCTGGGAGGGAAAG+AGG | 0.321617 | 7_2:+84588490 | None:intergenic |
| TTGGTGGTGGTGGTGCTGGG+AGG | 0.341538 | 7_2:+84588482 | None:intergenic |
| ATACCAGTAGTTCATGAAAC+AGG | 0.367040 | 7_2:-84584973 | Msa1084300:CDS |
| AATCATTGAGTGGGCATTCA+TGG | 0.370383 | 7_2:-84584262 | Msa1084300:CDS |
| ACAACTACAGAGGGTGGATT+TGG | 0.370411 | 7_2:-84587046 | Msa1084300:CDS |
| TAAAGATAAATTTCGTGGTT+GGG | 0.379084 | 7_2:-84585259 | Msa1084300:CDS |
| CATATCTGCTTTCAGCAATA+GGG | 0.379828 | 7_2:+84584234 | None:intergenic |
| CAGTTGTATGCAATGAGATA+TGG | 0.387558 | 7_2:-84585000 | Msa1084300:CDS |
| GCAGTTATTCTATGAGATAC+TGG | 0.400477 | 7_2:+84585222 | None:intergenic |
| GCCTTCAGCATTGCATCCTT+CGG | 0.400496 | 7_2:+84584816 | None:intergenic |
| TGGTGGTGGTGGTGCTGGGA+GGG | 0.406759 | 7_2:+84588483 | None:intergenic |
| CTCATCCAGTCTTCATATAT+AGG | 0.407433 | 7_2:+84585300 | None:intergenic |
| CTGAATCGAGTTGTTTCGCT+TGG | 0.410215 | 7_2:+84584691 | None:intergenic |
| AAATTGCTATATGTAATTGC+AGG | 0.420448 | 7_2:+84587656 | None:intergenic |
| ATCAGAGCAGAAGTTTCTTC+CGG | 0.420804 | 7_2:+84588424 | None:intergenic |
| GCATCGCTTCCTCCAGCAAA+TGG | 0.423925 | 7_2:+84584838 | None:intergenic |
| CGAGATGAGGTTGGTGGTGG+TGG | 0.430206 | 7_2:+84588472 | None:intergenic |
| ATAATGAACACAAGTCTTCA+TGG | 0.432708 | 7_2:-84584353 | Msa1084300:CDS |
| TATGTTGTTGTTCAAGAACT+TGG | 0.434953 | 7_2:-84584787 | Msa1084300:CDS |
| TCCGGTGTCCAGCACGGTGG+TGG | 0.436860 | 7_2:+84588442 | None:intergenic |
| TTTCAGGTAATGCTTGGTTC+GGG | 0.440926 | 7_2:-84585327 | Msa1084300:intron |
| CTTTATAAAGATAAATTTCG+TGG | 0.443734 | 7_2:-84585264 | Msa1084300:CDS |
| GAGCTCACCACTGGACAATC+AGG | 0.446530 | 7_2:+84586091 | None:intergenic |
| GATAAATTTCGTGGTTGGGT+TGG | 0.449687 | 7_2:-84585255 | Msa1084300:CDS |
| GCCGTCTTCCACCACCGTGC+TGG | 0.451370 | 7_2:-84588450 | Msa1084300:CDS |
| ACATATCTAGCCTTGATAAT+CGG | 0.454953 | 7_2:+84584170 | None:intergenic |
| ATTCTGCCGACGACATTTCT+GGG | 0.455059 | 7_2:-84586247 | Msa1084300:CDS |
| GTGTTCATTATATGTTTGAA+TGG | 0.457516 | 7_2:+84584365 | None:intergenic |
| GTGGTGCTGGGAGGGAAAGA+GGG | 0.460638 | 7_2:+84588491 | None:intergenic |
| ATAAAGATAAATTTCGTGGT+TGG | 0.461080 | 7_2:-84585260 | Msa1084300:CDS |
| ATTGCCTTGCAGAAGGAGTT+GGG | 0.466895 | 7_2:-84586127 | Msa1084300:CDS |
| AATGTCGTCGGCAGAATAGT+TGG | 0.468552 | 7_2:+84586253 | None:intergenic |
| GCAATATGTTCATCAGATGA+TGG | 0.474624 | 7_2:+84586278 | None:intergenic |
| ATCGATTCAGTTGGAGAAGA+TGG | 0.479775 | 7_2:+84588541 | None:intergenic |
| AGAGGGTGGATTTGGTCTAC+AGG | 0.480693 | 7_2:-84587038 | Msa1084300:CDS |
| GCTTGGACAATAGAGTTGTA+AGG | 0.481785 | 7_2:+84584708 | None:intergenic |
| GGTACGGCTGATGGTGGTGA+TGG | 0.482216 | 7_2:+84588517 | None:intergenic |
| GATTGCCTTGCAGAAGGAGT+TGG | 0.484930 | 7_2:-84586128 | Msa1084300:CDS |
| GGATGCAATGCTGAAGGCAC+GGG | 0.488330 | 7_2:-84584811 | Msa1084300:CDS |
| AACTTGTAGATTGGATTCGT+TGG | 0.494340 | 7_2:-84586012 | Msa1084300:intron |
| TATTGACTAGGGATCACAAA+TGG | 0.499730 | 7_2:-84586323 | Msa1084300:intron |
| CCACACGGCTCGAATGTTGA+TGG | 0.511227 | 7_2:+84585030 | None:intergenic |
| GAAATCCTATATATGAAGAC+TGG | 0.512634 | 7_2:-84585305 | Msa1084300:CDS |
| GGAAGACTTGATTACCAGAA+AGG | 0.515076 | 7_2:-84585991 | Msa1084300:CDS |
| AATAGAGTTGTAAGGCACTA+AGG | 0.516763 | 7_2:+84584716 | None:intergenic |
| AGAGGGAGAGGTACGGCTGA+TGG | 0.518443 | 7_2:+84588508 | None:intergenic |
| ACATCGTCTTGCATAAGCTC+TGG | 0.524359 | 7_2:+84585943 | None:intergenic |
| GAGAGATTACACCTGGGAAA+AGG | 0.525113 | 7_2:-84584304 | Msa1084300:CDS |
| TGGGAGGGATTGATGAAAAG+AGG | 0.525349 | 7_2:-84584333 | Msa1084300:CDS |
| GACAAAGGAGAGAATGTTAG+TGG | 0.526783 | 7_2:-84584617 | Msa1084300:intron |
| TCCACCACCGTGCTGGACAC+CGG | 0.527476 | 7_2:-84588443 | Msa1084300:CDS |
| TGGAATTGATGTTACTGAAT+GGG | 0.528155 | 7_2:-84586303 | Msa1084300:CDS |
| ATGGAATTGATGTTACTGAA+TGG | 0.529859 | 7_2:-84586304 | Msa1084300:CDS |
| TCCAGCACGGTGGTGGAAGA+CGG | 0.531155 | 7_2:+84588449 | None:intergenic |
| TGCCGACGACATTTCTGGGA+AGG | 0.532122 | 7_2:-84586243 | Msa1084300:intron |
| AGGTATTGACTTGATTCGCC+AGG | 0.532994 | 7_2:-84585971 | Msa1084300:CDS |
| GTATCTCATAGAATAACTGC+AGG | 0.537384 | 7_2:-84585219 | Msa1084300:CDS |
| GCATAAGCTCTGGAATTGCC+TGG | 0.541731 | 7_2:+84585953 | None:intergenic |
| ATTTGGGGCTGCCTCAAGAA+TGG | 0.545045 | 7_2:-84587637 | Msa1084300:intron |
| GCTGGGAGGGAAAGAGGGAG+AGG | 0.546456 | 7_2:+84588496 | None:intergenic |
| AGGATGCAATGCTGAAGGCA+CGG | 0.547103 | 7_2:-84584812 | Msa1084300:CDS |
| CGGCGAGATGAGGTTGGTGG+TGG | 0.548164 | 7_2:+84588469 | None:intergenic |
| AACATTCTCTCCTTTGTCAG+TGG | 0.558022 | 7_2:+84584622 | None:intergenic |
| GCGCCATTGTTACTGCTGAT+CGG | 0.576090 | 7_2:-84587532 | Msa1084300:CDS |
| GTATGACGAGAGATTACACC+TGG | 0.578921 | 7_2:-84584311 | Msa1084300:CDS |
| ACTGGACAATCAGGTCGCAC+TGG | 0.579346 | 7_2:+84586100 | None:intergenic |
| GAGGGAAAGAGGGAGAGGTA+CGG | 0.580802 | 7_2:+84588501 | None:intergenic |
| ATGTAAGATTGCCTTGCAGA+AGG | 0.587967 | 7_2:-84586134 | Msa1084300:CDS |
| GTACGGCTGATGGTGGTGAT+GGG | 0.588413 | 7_2:+84588518 | None:intergenic |
| TAATGAACACAAGTCTTCAT+GGG | 0.588417 | 7_2:-84584352 | Msa1084300:CDS |
| GAACACAAGTCTTCATGGGA+GGG | 0.590428 | 7_2:-84584348 | Msa1084300:CDS |
| CAATATGTTCATCAGATGAT+GGG | 0.596741 | 7_2:+84586279 | None:intergenic |
| TTATAAATTTCATTAACAGG+TGG | 0.597480 | 7_2:-84584654 | Msa1084300:CDS |
| ATCTGCTTTCAGCAATAGGG+TGG | 0.605343 | 7_2:+84584237 | None:intergenic |
| TGGTGGAAGACGGCGAGATG+AGG | 0.605549 | 7_2:+84588459 | None:intergenic |
| GCCGAAGGATGCAATGCTGA+AGG | 0.605754 | 7_2:-84584817 | Msa1084300:CDS |
| TACCAGTAGTTCATGAAACA+GGG | 0.607738 | 7_2:-84584972 | Msa1084300:CDS |
| AATGATTTGCTCGTATTGAG+CGG | 0.611048 | 7_2:+84584278 | None:intergenic |
| GTTTCTTCCGGTGTCCAGCA+CGG | 0.611210 | 7_2:+84588436 | None:intergenic |
| ATACGAGCAAATCATTGAGT+GGG | 0.612574 | 7_2:-84584271 | Msa1084300:CDS |
| GGAAGACGGCGAGATGAGGT+TGG | 0.615913 | 7_2:+84588463 | None:intergenic |
| AATACGAGCAAATCATTGAG+TGG | 0.616706 | 7_2:-84584272 | Msa1084300:CDS |
| CAATTACATATAGCAATTTG+GGG | 0.620521 | 7_2:-84587652 | Msa1084300:CDS |
| AGACGGCGAGATGAGGTTGG+TGG | 0.626962 | 7_2:+84588466 | None:intergenic |
| TCGGATAGTAACAGTAAGCA+AGG | 0.627715 | 7_2:-84587513 | Msa1084300:intron |
| GCGACAATTGAATACTTGAA+CGG | 0.628808 | 7_2:+84584755 | None:intergenic |
| TGGTGGTGGTGATGTTGCCA+TGG | 0.630730 | 7_2:+84588561 | None:intergenic |
| TATCCGATCAGCAGTAACAA+TGG | 0.634823 | 7_2:+84587529 | None:intergenic |
| GGGAGAGGTACGGCTGATGG+TGG | 0.634889 | 7_2:+84588511 | None:intergenic |
| GAGATAACAACTACAGAGGG+TGG | 0.639042 | 7_2:-84587052 | Msa1084300:CDS |
| AACCTTCCCAGAAATGTCGT+CGG | 0.640361 | 7_2:+84586241 | None:intergenic |
| GCTGGAGGAAGCGATGCCGA+AGG | 0.640969 | 7_2:-84584832 | Msa1084300:CDS |
| TATCTAGCCTTGATAATCGG+AGG | 0.641442 | 7_2:+84584173 | None:intergenic |
| GGTGATGGGATCGATTCAGT+TGG | 0.645748 | 7_2:+84588532 | None:intergenic |
| TGGGAGATAACAACTACAGA+GGG | 0.645945 | 7_2:-84587055 | Msa1084300:CDS |
| AGTGCTCCATACCATTCTTG+AGG | 0.647241 | 7_2:+84587626 | None:intergenic |
| TGAACACAAGTCTTCATGGG+AGG | 0.650187 | 7_2:-84584349 | Msa1084300:CDS |
| AAGACCCAACTCCTTCTGCA+AGG | 0.654288 | 7_2:+84586123 | None:intergenic |
| CCATCAACATTCGAGCCGTG+TGG | 0.657248 | 7_2:-84585030 | Msa1084300:CDS |
| TACAACTGATTTAGTCCACA+CGG | 0.660228 | 7_2:+84585015 | None:intergenic |
| GATTTGCTCGTATTGAGCGG+CGG | 0.669443 | 7_2:+84584281 | None:intergenic |
| TCAGTTGGAGAAGATGGTGG+TGG | 0.673207 | 7_2:+84588547 | None:intergenic |
| ACCAGTAGTTCATGAAACAG+GGG | 0.682127 | 7_2:-84584971 | Msa1084300:CDS |
| TTGGGAGATAACAACTACAG+AGG | 0.686211 | 7_2:-84587056 | Msa1084300:CDS |
| GATTCAGTTGGAGAAGATGG+TGG | 0.693067 | 7_2:+84588544 | None:intergenic |
| TCTTCCGGTGTCCAGCACGG+TGG | 0.693283 | 7_2:+84588439 | None:intergenic |
| GATGCAATGCTGAAGGCACG+GGG | 0.696578 | 7_2:-84584810 | Msa1084300:CDS |
| TATCTCATAGAATAACTGCA+GGG | 0.703392 | 7_2:-84585218 | Msa1084300:intron |
| CCAGTAGTTCATGAAACAGG+GGG | 0.705069 | 7_2:-84584970 | Msa1084300:CDS |
| AGTGCGACCTGATTGTCCAG+TGG | 0.724308 | 7_2:-84586098 | Msa1084300:intron |
| TATGACGAGAGATTACACCT+GGG | 0.773744 | 7_2:-84584310 | Msa1084300:CDS |
| GATAGAAAGAGTATTCTGAG+CGG | 0.785538 | 7_2:-84587004 | Msa1084300:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTTTATTTTATA+GGG | + | chr7_2:84587591-84587610 | None:intergenic | 0.0% |
| !!! | TATTTTTATTTTTATTTTAT+AGG | + | chr7_2:84587592-84587611 | None:intergenic | 0.0% |
| !!! | TTTTATATATTGAAATATGA+AGG | + | chr7_2:84588209-84588228 | None:intergenic | 10.0% |
| !!! | ATTTTCTTATTTTCTTTTTC+TGG | + | chr7_2:84586056-84586075 | None:intergenic | 15.0% |
| !!! | AAATTGGTAAAATATGATTT+TGG | - | chr7_2:84586953-84586972 | Msa1084300:intron | 15.0% |
| !! | AAAACAAGCAAAATATTAAT+CGG | + | chr7_2:84586981-84587000 | None:intergenic | 15.0% |
| !! | GAAATGAAATTATTAATACA+AGG | + | chr7_2:84587286-84587305 | None:intergenic | 15.0% |
| !! | AATATAAGATACATATATTG+TGG | + | chr7_2:84587536-84587555 | None:intergenic | 15.0% |
| !! | TTGTTATAAATTTCATTAAC+AGG | - | chr7_2:84588066-84588085 | Msa1084300:intron | 15.0% |
| !!! | TGCTGATAAATAGTTTTTTT+GGG | + | chr7_2:84584533-84584552 | None:intergenic | 20.0% |
| !!! | TTGCTGATAAATAGTTTTTT+TGG | + | chr7_2:84584534-84584553 | None:intergenic | 20.0% |
| !!! | GCAAAGAAAGAAAAATATTT+TGG | - | chr7_2:84584550-84584569 | Msa1084300:intron | 20.0% |
| !! | TTATATAGAAATATGATGAC+CGG | - | chr7_2:84584609-84584628 | Msa1084300:intron | 20.0% |
| !! | TAATTATATCCAATATAGAC+TGG | - | chr7_2:84584690-84584709 | Msa1084300:CDS | 20.0% |
| !! | ATGTATGAACAAGAAAATTA+AGG | + | chr7_2:84585757-84585776 | None:intergenic | 20.0% |
| !! | ATGCAATGAAATACTTATTA+TGG | - | chr7_2:84585787-84585806 | Msa1084300:intron | 20.0% |
| !!! | GTTAAGTTTTAGATCATATT+TGG | - | chr7_2:84585877-84585896 | Msa1084300:intron | 20.0% |
| !! | TTTGTGGTAAATATTGATAT+TGG | - | chr7_2:84585908-84585927 | Msa1084300:intron | 20.0% |
| !! | AATTAACAATTAATGAACAG+AGG | + | chr7_2:84586112-84586131 | None:intergenic | 20.0% |
| !! | AAGATAATATAGGGTTTAAT+AGG | - | chr7_2:84586916-84586935 | Msa1084300:intron | 20.0% |
| !!! | CATATTTTACCAATTTTACA+TGG | + | chr7_2:84586949-84586968 | None:intergenic | 20.0% |
| !! | AAACAAGCAAAATATTAATC+GGG | + | chr7_2:84586980-84586999 | None:intergenic | 20.0% |
| !!! | AACATTTTCCCAATTTTTAT+AGG | - | chr7_2:84587122-84587141 | Msa1084300:intron | 20.0% |
| !! | TTAACGTTCCTATAAAAATT+GGG | + | chr7_2:84587133-84587152 | None:intergenic | 20.0% |
| !! | ATTAACGTTCCTATAAAAAT+TGG | + | chr7_2:84587134-84587153 | None:intergenic | 20.0% |
| !!! | GTGTTTAAATTTTATTTAGC+AGG | + | chr7_2:84587176-84587195 | None:intergenic | 20.0% |
| !!! | ATAGTCCTATAAATTTTAGA+GGG | + | chr7_2:84587323-84587342 | None:intergenic | 20.0% |
| !!! | TATAGTCCTATAAATTTTAG+AGG | + | chr7_2:84587324-84587343 | None:intergenic | 20.0% |
| !! | CTTTATAAAGATAAATTTCG+TGG | - | chr7_2:84587459-84587478 | Msa1084300:intron | 20.0% |
| !! | ATCTTATATTGAATAATTGC+AGG | - | chr7_2:84587546-84587565 | Msa1084300:CDS | 20.0% |
| !! | TCTTATATTGAATAATTGCA+GGG | - | chr7_2:84587547-84587566 | Msa1084300:CDS | 20.0% |
| !! | TTATAAATTTCATTAACAGG+TGG | - | chr7_2:84588069-84588088 | Msa1084300:intron | 20.0% |
| !!! | TTTTATATATAAGCATCCTT+TGG | - | chr7_2:84588178-84588197 | Msa1084300:intron | 20.0% |
| !!! | AACTTTTATCAAATTTTGAC+AGG | - | chr7_2:84588323-84588342 | Msa1084300:intron | 20.0% |
| !!! | TTGAATTTGTTATGAAACAC+AGG | - | chr7_2:84584500-84584519 | Msa1084300:intron | 25.0% |
| ! | TATATAGAAATATGATGACC+GGG | - | chr7_2:84584610-84584629 | Msa1084300:intron | 25.0% |
| !!! | TAATTATATGCCTTTTGACT+TGG | + | chr7_2:84584676-84584695 | None:intergenic | 25.0% |
| !!! | TTATCATGTGGCTATTTTTA+TGG | + | chr7_2:84584724-84584743 | None:intergenic | 25.0% |
| ! | CTAAACAATTTAAAGATGTG+AGG | + | chr7_2:84584988-84585007 | None:intergenic | 25.0% |
| ! | AATTGATGTGTAATTGTGTT+AGG | - | chr7_2:84585036-84585055 | Msa1084300:CDS | 25.0% |
| ! | ATTGATGTGTAATTGTGTTA+GGG | - | chr7_2:84585037-84585056 | Msa1084300:CDS | 25.0% |
| ! | AAATTGCTATATGTAATTGC+AGG | + | chr7_2:84585070-84585089 | None:intergenic | 25.0% |
| ! | TGCAATTACATATAGCAATT+TGG | - | chr7_2:84585069-84585088 | Msa1084300:intron | 25.0% |
| ! | GCAATTACATATAGCAATTT+GGG | - | chr7_2:84585070-84585089 | Msa1084300:intron | 25.0% |
| ! | CAATTACATATAGCAATTTG+GGG | - | chr7_2:84585071-84585090 | Msa1084300:intron | 25.0% |
| ! | TGCTTGAATAGATAAAAGAA+CGG | + | chr7_2:84585267-84585286 | None:intergenic | 25.0% |
| !! | TCTTTTATCTATTCAAGCAT+TGG | - | chr7_2:84585268-84585287 | Msa1084300:CDS | 25.0% |
| !! | CTTTTATCTATTCAAGCATT+GGG | - | chr7_2:84585269-84585288 | Msa1084300:CDS | 25.0% |
| !!! | TTTTATCTATTCAAGCATTG+GGG | - | chr7_2:84585270-84585289 | Msa1084300:CDS | 25.0% |
| !! | TGATACAAGCTTTTAACAAT+TGG | + | chr7_2:84585369-84585388 | None:intergenic | 25.0% |
| !!! | AGTTTTAGATCATATTTGGT+TGG | - | chr7_2:84585881-84585900 | Msa1084300:intron | 25.0% |
| !!! | AGTAGGTTAACTTTGAAATT+AGG | - | chr7_2:84585970-84585989 | Msa1084300:CDS | 25.0% |
| ! | AAAGGAAAATTGATAAGAAC+TGG | + | chr7_2:84586033-84586052 | None:intergenic | 25.0% |
| !!! | CTTATTTTCTTTTTCTGGAA+AGG | + | chr7_2:84586051-84586070 | None:intergenic | 25.0% |
| !! | GTTAATGTTAATGGATGAAT+TGG | - | chr7_2:84586218-84586237 | Msa1084300:intron | 25.0% |
| !!! | TAACGGTTTTATTATTGACT+AGG | - | chr7_2:84586388-84586407 | Msa1084300:intron | 25.0% |
| !!! | AACGGTTTTATTATTGACTA+GGG | - | chr7_2:84586389-84586408 | Msa1084300:intron | 25.0% |
| !! | TTTCATAAATACGTTTGTTG+TGG | - | chr7_2:84586831-84586850 | Msa1084300:intron | 25.0% |
| ! | TTGGGGTATAAGATAATATA+GGG | - | chr7_2:84586907-84586926 | Msa1084300:intron | 25.0% |
| !! | GTTCATAATCTTGTGTTTTA+AGG | - | chr7_2:84587063-84587082 | Msa1084300:CDS | 25.0% |
| ! | ATCAAAAATGATCATTTACC+TGG | + | chr7_2:84587249-84587268 | None:intergenic | 25.0% |
| !!! | AATGATCATTTTTGATCATG+TGG | - | chr7_2:84587253-84587272 | Msa1084300:intron | 25.0% |
| ! | AGGACTATATGTTGTATTAT+TGG | - | chr7_2:84587335-84587354 | Msa1084300:intron | 25.0% |
| ! | ATAAAGATAAATTTCGTGGT+TGG | - | chr7_2:84587463-84587482 | Msa1084300:intron | 25.0% |
| ! | TAAAGATAAATTTCGTGGTT+GGG | - | chr7_2:84587464-84587483 | Msa1084300:intron | 25.0% |
| !!! | CAAAATTTTAATCCATTTGC+TGG | - | chr7_2:84587873-84587892 | Msa1084300:intron | 25.0% |
| ! | TTTGAATGAACAAGAAATGA+CGG | + | chr7_2:84588150-84588169 | None:intergenic | 25.0% |
| ! | GTGTTCATTATATGTTTGAA+TGG | + | chr7_2:84588361-84588380 | None:intergenic | 25.0% |
| !!! | CTGAAAATGGTTTTATCATG+TGG | + | chr7_2:84584736-84584755 | None:intergenic | 30.0% |
| !!! | CCTTATTTTCTCACTGAAAA+TGG | + | chr7_2:84584749-84584768 | None:intergenic | 30.0% |
| ! | CCATTTTCAGTGAGAAAATA+AGG | - | chr7_2:84584746-84584765 | Msa1084300:CDS | 30.0% |
| AAGTAAGAAAACCAAGTCAA+AGG | - | chr7_2:84584784-84584803 | Msa1084300:CDS | 30.0% | |
| AAATAAGCTAACCTTTGACT+TGG | + | chr7_2:84584798-84584817 | None:intergenic | 30.0% | |
| !!! | AGTCAAAGGTTAGCTTATTT+TGG | - | chr7_2:84584798-84584817 | Msa1084300:CDS | 30.0% |
| !!! | GTCAAAGGTTAGCTTATTTT+GGG | - | chr7_2:84584799-84584818 | Msa1084300:CDS | 30.0% |
| !! | TATTTTGGGAATGATAAACG+TGG | - | chr7_2:84584813-84584832 | Msa1084300:CDS | 30.0% |
| AGTTGTTACAAATGCTTAGA+TGG | - | chr7_2:84584950-84584969 | Msa1084300:intron | 30.0% | |
| ! | GAAGCTGTCAATTTTCTAAA+AGG | - | chr7_2:84585169-84585188 | Msa1084300:intron | 30.0% |
| GCTTGAATAGATAAAAGAAC+GGG | + | chr7_2:84585266-84585285 | None:intergenic | 30.0% | |
| ! | ACAAGCTTTTAACAATTGGT+GGG | + | chr7_2:84585365-84585384 | None:intergenic | 30.0% |
| ! | TACAAGCTTTTAACAATTGG+TGG | + | chr7_2:84585366-84585385 | None:intergenic | 30.0% |
| !! | TTGAATGGAGGATTTTAGAA+GGG | + | chr7_2:84585484-84585503 | None:intergenic | 30.0% |
| ! | TTTGAATGGAGGATTTTAGA+AGG | + | chr7_2:84585485-84585504 | None:intergenic | 30.0% |
| CATTCAAATATAGCCTAAGT+GGG | - | chr7_2:84585497-84585516 | Msa1084300:intron | 30.0% | |
| ATTCAAATATAGCCTAAGTG+GGG | - | chr7_2:84585498-84585517 | Msa1084300:intron | 30.0% | |
| AATAACACACTCATACAAAC+TGG | + | chr7_2:84585603-84585622 | None:intergenic | 30.0% | |
| TTATTGTGTGGAATGCTTAA+AGG | - | chr7_2:84585618-84585637 | Msa1084300:intron | 30.0% | |
| TATTGTGTGGAATGCTTAAA+GGG | - | chr7_2:84585619-84585638 | Msa1084300:intron | 30.0% | |
| ! | TCATTTTCACCAATAGTAGT+AGG | - | chr7_2:84585953-84585972 | Msa1084300:CDS | 30.0% |
| CAAAGTTAACCTACTACTAT+TGG | + | chr7_2:84585965-84585984 | None:intergenic | 30.0% | |
| GCATGTTGTGTTAATGTTAA+TGG | - | chr7_2:84586209-84586228 | Msa1084300:intron | 30.0% | |
| CTTAATGCTCAAACTTGTAA+CGG | - | chr7_2:84586371-84586390 | Msa1084300:intron | 30.0% | |
| ATGGAATTGATGTTACTGAA+TGG | - | chr7_2:84586419-84586438 | Msa1084300:intron | 30.0% | |
| TGGAATTGATGTTACTGAAT+GGG | - | chr7_2:84586420-84586439 | Msa1084300:intron | 30.0% | |
| CAATATGTTCATCAGATGAT+GGG | + | chr7_2:84586447-84586466 | None:intergenic | 30.0% | |
| AAGTTCAGCTAAAGATACAA+GGG | + | chr7_2:84586535-84586554 | None:intergenic | 30.0% | |
| AAAGTTCAGCTAAAGATACA+AGG | + | chr7_2:84586536-84586555 | None:intergenic | 30.0% | |
| CTTGGGGTATAAGATAATAT+AGG | - | chr7_2:84586906-84586925 | Msa1084300:intron | 30.0% | |
| !! | GGTTTTGATCCATGTAAAAT+TGG | - | chr7_2:84586937-84586956 | Msa1084300:intron | 30.0% |
| ATCTCTACACTTAACAAAAG+TGG | - | chr7_2:84587003-84587022 | Msa1084300:intron | 30.0% | |
| !! | ATGAGCCCTCTAAAATTTAT+AGG | - | chr7_2:84587315-84587334 | Msa1084300:intron | 30.0% |
| GAAAAGGGGAAAATAATTAG+AGG | + | chr7_2:84587380-84587399 | None:intergenic | 30.0% | |
| ! | CTAATTATTTTCCCCTTTTC+AGG | - | chr7_2:84587380-84587399 | Msa1084300:intron | 30.0% |
| GAAATCCTATATATGAAGAC+TGG | - | chr7_2:84587418-84587437 | Msa1084300:intron | 30.0% | |
| TATCTCATAGAATAACTGCA+GGG | - | chr7_2:84587505-84587524 | Msa1084300:intron | 30.0% | |
| CAACAAAATCAAACATGTCA+AGG | + | chr7_2:84587836-84587855 | None:intergenic | 30.0% | |
| !!! | GTTTGATTTTGTTGTTCTAC+AGG | - | chr7_2:84587842-84587861 | Msa1084300:intron | 30.0% |
| !! | AATTTTAATCCATTTGCTGG+AGG | - | chr7_2:84587876-84587895 | Msa1084300:intron | 30.0% |
| ! | TATGTTGTTGTTCAAGAACT+TGG | - | chr7_2:84587936-84587955 | Msa1084300:intron | 30.0% |
| TTGAATGAACAAGAAATGAC+GGG | + | chr7_2:84588149-84588168 | None:intergenic | 30.0% | |
| TGACACAATGAAAGATAACA+AGG | + | chr7_2:84588287-84588306 | None:intergenic | 30.0% | |
| ATTGTGTCATCTTCTATTTG+TGG | - | chr7_2:84588298-84588317 | Msa1084300:intron | 30.0% | |
| ATAATGAACACAAGTCTTCA+TGG | - | chr7_2:84588370-84588389 | Msa1084300:intron | 30.0% | |
| TAATGAACACAAGTCTTCAT+GGG | - | chr7_2:84588371-84588390 | Msa1084300:intron | 30.0% | |
| !! | ACATATCTAGCCTTGATAAT+CGG | + | chr7_2:84588556-84588575 | None:intergenic | 30.0% |
| CTCCGAATATGATTCATATC+GGG | + | chr7_2:84584467-84584486 | None:intergenic | 35.0% | |
| CCTCCGAATATGATTCATAT+CGG | + | chr7_2:84584468-84584487 | None:intergenic | 35.0% | |
| AGTTAGTTAACCACCCATTA+TGG | - | chr7_2:84584649-84584668 | Msa1084300:CDS | 35.0% | |
| !!! | CTTTTGACTTGGTCCATAAT+GGG | + | chr7_2:84584665-84584684 | None:intergenic | 35.0% |
| GAATATGTGCCAGTCTATAT+TGG | + | chr7_2:84584702-84584721 | None:intergenic | 35.0% | |
| AATGCTTAGATGGTATACCT+TGG | - | chr7_2:84584960-84584979 | Msa1084300:intron | 35.0% | |
| ! | TTTAAAGATGTGAGGTACCA+AGG | + | chr7_2:84584980-84584999 | None:intergenic | 35.0% |
| TAGATTGAGTATCCACTATG+AGG | + | chr7_2:84585327-84585346 | None:intergenic | 35.0% | |
| CTTAGGCTATATTTGAATGG+AGG | + | chr7_2:84585496-84585515 | None:intergenic | 35.0% | |
| CCACTTAGGCTATATTTGAA+TGG | + | chr7_2:84585499-84585518 | None:intergenic | 35.0% | |
| CCATTCAAATATAGCCTAAG+TGG | - | chr7_2:84585496-84585515 | Msa1084300:intron | 35.0% | |
| !!! | GTTTTGGAGTCTTTTAAGCA+GGG | - | chr7_2:84585520-84585539 | Msa1084300:intron | 35.0% |
| !!! | TTTTGGAGTCTTTTAAGCAG+GGG | - | chr7_2:84585521-84585540 | Msa1084300:intron | 35.0% |
| ! | TGTATGAGTGTGTTATTGTG+TGG | - | chr7_2:84585606-84585625 | Msa1084300:intron | 35.0% |
| !! | GATAGAAAGAGTATTCTGAG+CGG | - | chr7_2:84585719-84585738 | Msa1084300:intron | 35.0% |
| ! | ATATTTGGTTGGTGTGTTTG+TGG | - | chr7_2:84585892-84585911 | Msa1084300:intron | 35.0% |
| TTGATAAGAACTGGATCAGA+AGG | + | chr7_2:84586024-84586043 | None:intergenic | 35.0% | |
| TGAATTGGTCATAAGTGTAG+TGG | - | chr7_2:84586233-84586252 | Msa1084300:intron | 35.0% | |
| ACAGATTAAATTGCCTAGTC+TGG | - | chr7_2:84586284-84586303 | Msa1084300:CDS | 35.0% | |
| ! | ACTTTGAAAAATGCCAGACT+AGG | + | chr7_2:84586300-84586319 | None:intergenic | 35.0% |
| !! | CTGGCATTTTTCAAAGTTGA+TGG | - | chr7_2:84586303-84586322 | Msa1084300:CDS | 35.0% |
| !!! | GCATTTTTCAAAGTTGATGG+AGG | - | chr7_2:84586306-84586325 | Msa1084300:CDS | 35.0% |
| ! | GTTGATGGAGGATAATTGTT+AGG | - | chr7_2:84586318-84586337 | Msa1084300:intron | 35.0% |
| CGTTACAAGTTTGAGCATTA+AGG | + | chr7_2:84586373-84586392 | None:intergenic | 35.0% | |
| ! | TATTGACTAGGGATCACAAA+TGG | - | chr7_2:84586400-84586419 | Msa1084300:intron | 35.0% |
| GCAATATGTTCATCAGATGA+TGG | + | chr7_2:84586448-84586467 | None:intergenic | 35.0% | |
| TTTACCCTAACTTTCTGCAA+TGG | - | chr7_2:84586557-84586576 | Msa1084300:intron | 35.0% | |
| AACTTGTAGATTGGATTCGT+TGG | - | chr7_2:84586711-84586730 | Msa1084300:intron | 35.0% | |
| GAATCAAGTCAATACCTTTC+TGG | + | chr7_2:84586749-84586768 | None:intergenic | 35.0% | |
| GTGGCAAATAATTAAGTCCT+TGG | - | chr7_2:84586850-84586869 | Msa1084300:intron | 35.0% | |
| TAATTAAGTCCTTGGATTCC+TGG | - | chr7_2:84586858-84586877 | Msa1084300:intron | 35.0% | |
| AACCAAGCATTACCTGAAAA+GGG | + | chr7_2:84587395-84587414 | None:intergenic | 35.0% | |
| !!! | TTTTCAGGTAATGCTTGGTT+CGG | - | chr7_2:84587395-84587414 | Msa1084300:intron | 35.0% |
| CTCATCCAGTCTTCATATAT+AGG | + | chr7_2:84587426-84587445 | None:intergenic | 35.0% | |
| GCAGTTATTCTATGAGATAC+TGG | + | chr7_2:84587504-84587523 | None:intergenic | 35.0% | |
| GTATCTCATAGAATAACTGC+AGG | - | chr7_2:84587504-84587523 | Msa1084300:intron | 35.0% | |
| ! | TACAACTGATTTAGTCCACA+CGG | + | chr7_2:84587711-84587730 | None:intergenic | 35.0% |
| CAGTTGTATGCAATGAGATA+TGG | - | chr7_2:84587723-84587742 | Msa1084300:intron | 35.0% | |
| ATACCAGTAGTTCATGAAAC+AGG | - | chr7_2:84587750-84587769 | Msa1084300:intron | 35.0% | |
| TACCAGTAGTTCATGAAACA+GGG | - | chr7_2:84587751-84587770 | Msa1084300:intron | 35.0% | |
| GCGACAATTGAATACTTGAA+CGG | + | chr7_2:84587971-84587990 | None:intergenic | 35.0% | |
| ! | AATAGAGTTGTAAGGCACTA+AGG | + | chr7_2:84588010-84588029 | None:intergenic | 35.0% |
| !! | AATGATTTGCTCGTATTGAG+CGG | + | chr7_2:84588448-84588467 | None:intergenic | 35.0% |
| AATACGAGCAAATCATTGAG+TGG | - | chr7_2:84588451-84588470 | Msa1084300:CDS | 35.0% | |
| ATACGAGCAAATCATTGAGT+GGG | - | chr7_2:84588452-84588471 | Msa1084300:CDS | 35.0% | |
| CATATCTGCTTTCAGCAATA+GGG | + | chr7_2:84588492-84588511 | None:intergenic | 35.0% | |
| TCATATCTGCTTTCAGCAAT+AGG | + | chr7_2:84588493-84588512 | None:intergenic | 35.0% | |
| ! | AGTTTTTCCTCCGATTATCA+AGG | - | chr7_2:84588543-84588562 | Msa1084300:CDS | 35.0% |
| ! | ATCGATTCAGTTGGAGAAGA+TGG | + | chr7_2:84584185-84584204 | None:intergenic | 40.0% |
| ATCAGAGCAGAAGTTTCTTC+CGG | + | chr7_2:84584302-84584321 | None:intergenic | 40.0% | |
| CCGATATGAATCATATTCGG+AGG | - | chr7_2:84584465-84584484 | Msa1084300:intron | 40.0% | |
| CTTCGTTTACTCACAAAACC+CGG | + | chr7_2:84584631-84584650 | None:intergenic | 40.0% | |
| !!! | CCTTTTGACTTGGTCCATAA+TGG | + | chr7_2:84584666-84584685 | None:intergenic | 40.0% |
| CCATTATGGACCAAGTCAAA+AGG | - | chr7_2:84584663-84584682 | Msa1084300:CDS | 40.0% | |
| TGTGTAATTGTGTTAGGGAG+TGG | - | chr7_2:84585042-84585061 | Msa1084300:CDS | 40.0% | |
| TATCCGATCAGCAGTAACAA+TGG | + | chr7_2:84585197-84585216 | None:intergenic | 40.0% | |
| TCGGATAGTAACAGTAAGCA+AGG | - | chr7_2:84585210-84585229 | Msa1084300:intron | 40.0% | |
| TTTCTTTCCGTTCCTCATAG+TGG | - | chr7_2:84585312-84585331 | Msa1084300:CDS | 40.0% | |
| TGAGTATCCACTATGAGGAA+CGG | + | chr7_2:84585322-84585341 | None:intergenic | 40.0% | |
| !! | ATGGAGGATTTTAGAAGGGA+GGG | + | chr7_2:84585480-84585499 | None:intergenic | 40.0% |
| !! | AATGGAGGATTTTAGAAGGG+AGG | + | chr7_2:84585481-84585500 | None:intergenic | 40.0% |
| ! | ATATAGCCTAAGTGGGGTTT+TGG | - | chr7_2:84585504-84585523 | Msa1084300:intron | 40.0% |
| !!! | GGTTTTGGAGTCTTTTAAGC+AGG | - | chr7_2:84585519-84585538 | Msa1084300:intron | 40.0% |
| !! | TTTGGAGTCTTTTAAGCAGG+GGG | - | chr7_2:84585522-84585541 | Msa1084300:intron | 40.0% |
| ! | GCAGGGTAACTTTCTTTTTC+AGG | - | chr7_2:84585564-84585583 | Msa1084300:intron | 40.0% |
| TTGGGAGATAACAACTACAG+AGG | - | chr7_2:84585667-84585686 | Msa1084300:intron | 40.0% | |
| TGGGAGATAACAACTACAGA+GGG | - | chr7_2:84585668-84585687 | Msa1084300:intron | 40.0% | |
| ! | AGACGAGCATTTTCACTGAA+GGG | + | chr7_2:84585854-84585873 | None:intergenic | 40.0% |
| AAGAACTGGATCAGAAGGAA+TGG | + | chr7_2:84586019-84586038 | None:intergenic | 40.0% | |
| TATGCTGTGTTCATGTGAAG+TGG | - | chr7_2:84586134-84586153 | Msa1084300:CDS | 40.0% | |
| CTGTCCATTGCAGAAAGTTA+GGG | + | chr7_2:84586564-84586583 | None:intergenic | 40.0% | |
| ATGTAAGATTGCCTTGCAGA+AGG | - | chr7_2:84586589-84586608 | Msa1084300:intron | 40.0% | |
| GTGAGCTCATGTTATCTACT+GGG | - | chr7_2:84586647-84586666 | Msa1084300:intron | 40.0% | |
| ! | ACTCTTTCTTGTATTGACCG+TGG | - | chr7_2:84586684-84586703 | Msa1084300:intron | 40.0% |
| CAATCTACAAGTTTCAGCCA+CGG | + | chr7_2:84586704-84586723 | None:intergenic | 40.0% | |
| GGAAGACTTGATTACCAGAA+AGG | - | chr7_2:84586732-84586751 | Msa1084300:intron | 40.0% | |
| AGAGATCACAGATTGCAGAT+AGG | + | chr7_2:84586886-84586905 | None:intergenic | 40.0% | |
| TGCAATCTGTGATCTCTCTT+GGG | - | chr7_2:84586889-84586908 | Msa1084300:intron | 40.0% | |
| AAGATTATGAACTGACAGCC+CGG | + | chr7_2:84587055-84587074 | None:intergenic | 40.0% | |
| TACTTACCAGTAACAAGTCC+AGG | - | chr7_2:84587228-84587247 | Msa1084300:intron | 40.0% | |
| !! | CATTTACCTGGACTTGTTAC+TGG | + | chr7_2:84587237-84587256 | None:intergenic | 40.0% |
| ACCAAGCATTACCTGAAAAG+GGG | + | chr7_2:84587394-84587413 | None:intergenic | 40.0% | |
| GAACCAAGCATTACCTGAAA+AGG | + | chr7_2:84587396-84587415 | None:intergenic | 40.0% | |
| ! | TTTCAGGTAATGCTTGGTTC+GGG | - | chr7_2:84587396-84587415 | Msa1084300:intron | 40.0% |
| GATAAATTTCGTGGTTGGGT+TGG | - | chr7_2:84587468-84587487 | Msa1084300:intron | 40.0% | |
| ACCAGTAGTTCATGAAACAG+GGG | - | chr7_2:84587752-84587771 | Msa1084300:intron | 40.0% | |
| GCTTGGACAATAGAGTTGTA+AGG | + | chr7_2:84588018-84588037 | None:intergenic | 40.0% | |
| AACATTCTCTCCTTTGTCAG+TGG | + | chr7_2:84588104-84588123 | None:intergenic | 40.0% | |
| GACAAAGGAGAGAATGTTAG+TGG | - | chr7_2:84588106-84588125 | Msa1084300:intron | 40.0% | |
| !! | AAATATGAAGGCGCTACCAA+AGG | + | chr7_2:84588197-84588216 | None:intergenic | 40.0% |
| TATGACGAGAGATTACACCT+GGG | - | chr7_2:84588413-84588432 | Msa1084300:CDS | 40.0% | |
| AATCATTGAGTGGGCATTCA+TGG | - | chr7_2:84588461-84588480 | Msa1084300:CDS | 40.0% | |
| !! | TATCTAGCCTTGATAATCGG+AGG | + | chr7_2:84588553-84588572 | None:intergenic | 40.0% |
| GATTCAGTTGGAGAAGATGG+TGG | + | chr7_2:84584182-84584201 | None:intergenic | 45.0% | |
| TCGATTCCTACCGCGAAAAA+TGG | - | chr7_2:84584321-84584340 | Msa1084300:CDS | 45.0% | |
| !! | AGAGTACCATTTTTCGCGGT+AGG | + | chr7_2:84584330-84584349 | None:intergenic | 45.0% |
| !!! | CGAGAGAGTACCATTTTTCG+CGG | + | chr7_2:84584334-84584353 | None:intergenic | 45.0% |
| CGCGAAAAATGGTACTCTCT+CGG | - | chr7_2:84584332-84584351 | Msa1084300:CDS | 45.0% | |
| !! | TTGACTTGGTCCATAATGGG+TGG | + | chr7_2:84584662-84584681 | None:intergenic | 45.0% |
| AGTGCTCCATACCATTCTTG+AGG | + | chr7_2:84585100-84585119 | None:intergenic | 45.0% | |
| TCAAGAATGGTATGGAGCAC+TGG | - | chr7_2:84585099-84585118 | Msa1084300:intron | 45.0% | |
| ! | CAAGAATGGTATGGAGCACT+GGG | - | chr7_2:84585100-84585119 | Msa1084300:intron | 45.0% |
| TGGGATGAGTATTCCCTACT+TGG | - | chr7_2:84585119-84585138 | Msa1084300:intron | 45.0% | |
| GGGATGAGTATTCCCTACTT+GGG | - | chr7_2:84585120-84585139 | Msa1084300:intron | 45.0% | |
| AAGACTCCAAAACCCCACTT+AGG | + | chr7_2:84585513-84585532 | None:intergenic | 45.0% | |
| AGAATAGCCCTGGAAAAGGA+AGG | + | chr7_2:84585648-84585667 | None:intergenic | 45.0% | |
| ! | TCCTTTTCCAGGGCTATTCT+TGG | - | chr7_2:84585648-84585667 | Msa1084300:intron | 45.0% |
| ! | CCTTTTCCAGGGCTATTCTT+GGG | - | chr7_2:84585649-84585668 | Msa1084300:intron | 45.0% |
| TTATCTCCCAAGAATAGCCC+TGG | + | chr7_2:84585658-84585677 | None:intergenic | 45.0% | |
| GAGATAACAACTACAGAGGG+TGG | - | chr7_2:84585671-84585690 | Msa1084300:intron | 45.0% | |
| ! | ACAACTACAGAGGGTGGATT+TGG | - | chr7_2:84585677-84585696 | Msa1084300:intron | 45.0% |
| ! | GAGACGAGCATTTTCACTGA+AGG | + | chr7_2:84585855-84585874 | None:intergenic | 45.0% |
| AAGTGGCTGTTTGCAGACTT+TGG | - | chr7_2:84586151-84586170 | Msa1084300:intron | 45.0% | |
| AATGTCGTCGGCAGAATAGT+TGG | + | chr7_2:84586473-84586492 | None:intergenic | 45.0% | |
| TATTCTGCCGACGACATTTC+TGG | - | chr7_2:84586475-84586494 | Msa1084300:intron | 45.0% | |
| ATTCTGCCGACGACATTTCT+GGG | - | chr7_2:84586476-84586495 | Msa1084300:intron | 45.0% | |
| AACCTTCCCAGAAATGTCGT+CGG | + | chr7_2:84586485-84586504 | None:intergenic | 45.0% | |
| CAGCTAAAGATACAAGGGAG+AGG | + | chr7_2:84586530-84586549 | None:intergenic | 45.0% | |
| CCTGTCCATTGCAGAAAGTT+AGG | + | chr7_2:84586565-84586584 | None:intergenic | 45.0% | |
| CCTAACTTTCTGCAATGGAC+AGG | - | chr7_2:84586562-84586581 | Msa1084300:intron | 45.0% | |
| ATTGCCTTGCAGAAGGAGTT+GGG | - | chr7_2:84586596-84586615 | Msa1084300:intron | 45.0% | |
| AGATAACATGAGCTCACCAC+TGG | + | chr7_2:84586644-84586663 | None:intergenic | 45.0% | |
| GGTGAGCTCATGTTATCTAC+TGG | - | chr7_2:84586646-84586665 | Msa1084300:intron | 45.0% | |
| CGTGGCTGAAACTTGTAGAT+TGG | - | chr7_2:84586702-84586721 | Msa1084300:intron | 45.0% | |
| !! | AGGTATTGACTTGATTCGCC+AGG | - | chr7_2:84586752-84586771 | Msa1084300:intron | 45.0% |
| ACATCGTCTTGCATAAGCTC+TGG | + | chr7_2:84586783-84586802 | None:intergenic | 45.0% | |
| AGATAGGTACCAGGAATCCA+AGG | + | chr7_2:84586870-84586889 | None:intergenic | 45.0% | |
| ACAGATTGCAGATAGGTACC+AGG | + | chr7_2:84586879-84586898 | None:intergenic | 45.0% | |
| CTGCAATCTGTGATCTCTCT+TGG | - | chr7_2:84586888-84586907 | Msa1084300:intron | 45.0% | |
| GCAATCTGTGATCTCTCTTG+GGG | - | chr7_2:84586890-84586909 | Msa1084300:intron | 45.0% | |
| AGATTATGAACTGACAGCCC+GGG | + | chr7_2:84587054-84587073 | None:intergenic | 45.0% | |
| !!! | TCCCCTTTTCAGGTAATGCT+TGG | - | chr7_2:84587390-84587409 | Msa1084300:intron | 45.0% |
| CCAGTAGTTCATGAAACAGG+GGG | - | chr7_2:84587753-84587772 | Msa1084300:intron | 45.0% | |
| ! | CTGAATCGAGTTGTTTCGCT+TGG | + | chr7_2:84588035-84588054 | None:intergenic | 45.0% |
| ! | GACGTTTTCTCCACTGACAA+AGG | - | chr7_2:84588091-84588110 | Msa1084300:intron | 45.0% |
| TGAACACAAGTCTTCATGGG+AGG | - | chr7_2:84588374-84588393 | Msa1084300:intron | 45.0% | |
| GAACACAAGTCTTCATGGGA+GGG | - | chr7_2:84588375-84588394 | Msa1084300:intron | 45.0% | |
| TGGGAGGGATTGATGAAAAG+AGG | - | chr7_2:84588390-84588409 | Msa1084300:intron | 45.0% | |
| GTATGACGAGAGATTACACC+TGG | - | chr7_2:84588412-84588431 | Msa1084300:CDS | 45.0% | |
| GAGAGATTACACCTGGGAAA+AGG | - | chr7_2:84588419-84588438 | Msa1084300:CDS | 45.0% | |
| ATCTGCTTTCAGCAATAGGG+TGG | + | chr7_2:84588489-84588508 | None:intergenic | 45.0% | |
| !!! | TAATTTTTTTTTTTTTGAAA+GGG | + | chr7_2:84587198-84587217 | None:intergenic | 5.0% |
| !!! | TTAATTTTTTTTTTTTTGAA+AGG | + | chr7_2:84587199-84587218 | None:intergenic | 5.0% |
| ! | TCAGTTGGAGAAGATGGTGG+TGG | + | chr7_2:84584179-84584198 | None:intergenic | 50.0% |
| !! | GGTGATGGGATCGATTCAGT+TGG | + | chr7_2:84584194-84584213 | None:intergenic | 50.0% |
| ! | ATTTGGGGCTGCCTCAAGAA+TGG | - | chr7_2:84585086-84585105 | Msa1084300:intron | 50.0% |
| AGGACACATGCTCTTGACAC+AGG | - | chr7_2:84585145-84585164 | Msa1084300:intron | 50.0% | |
| GCGCCATTGTTACTGCTGAT+CGG | - | chr7_2:84585191-84585210 | Msa1084300:intron | 50.0% | |
| ! | TCTTTTAAGCAGGGGGTTGC+AGG | - | chr7_2:84585529-84585548 | Msa1084300:intron | 50.0% |
| ! | AAGGGATGCCTTCCTTTTCC+AGG | - | chr7_2:84585637-84585656 | Msa1084300:intron | 50.0% |
| ! | AGGGATGCCTTCCTTTTCCA+GGG | - | chr7_2:84585638-84585657 | Msa1084300:intron | 50.0% |
| CCCAAGAATAGCCCTGGAAA+AGG | + | chr7_2:84585652-84585671 | None:intergenic | 50.0% | |
| ! | AGAGGGTGGATTTGGTCTAC+AGG | - | chr7_2:84585685-84585704 | Msa1084300:intron | 50.0% |
| GATTGCCTTGCAGAAGGAGT+TGG | - | chr7_2:84586595-84586614 | Msa1084300:intron | 50.0% | |
| AAGACCCAACTCCTTCTGCA+AGG | + | chr7_2:84586603-84586622 | None:intergenic | 50.0% | |
| !! | GCATAAGCTCTGGAATTGCC+TGG | + | chr7_2:84586773-84586792 | None:intergenic | 50.0% |
| TCCCTCATGAAGCTCTTACC+CGG | - | chr7_2:84587033-84587052 | Msa1084300:CDS | 50.0% | |
| CCCCCTGTTTCATGAACTAC+TGG | + | chr7_2:84587756-84587775 | None:intergenic | 50.0% | |
| GCCTTCAGCATTGCATCCTT+CGG | + | chr7_2:84587910-84587929 | None:intergenic | 50.0% | |
| AGGATGCAATGCTGAAGGCA+CGG | - | chr7_2:84587911-84587930 | Msa1084300:intron | 50.0% | |
| ! | GATTTGCTCGTATTGAGCGG+CGG | + | chr7_2:84588445-84588464 | None:intergenic | 50.0% |
| !! | GTACGGCTGATGGTGGTGAT+GGG | + | chr7_2:84584208-84584227 | None:intergenic | 55.0% |
| GAGGGAAAGAGGGAGAGGTA+CGG | + | chr7_2:84584225-84584244 | None:intergenic | 55.0% | |
| GTTTCTTCCGGTGTCCAGCA+CGG | + | chr7_2:84584290-84584309 | None:intergenic | 55.0% | |
| GGGCTGCCTCAAGAATGGTA+TGG | - | chr7_2:84585091-84585110 | Msa1084300:intron | 55.0% | |
| GAGTATTCCCTACTTGGGCG+AGG | - | chr7_2:84585125-84585144 | Msa1084300:intron | 55.0% | |
| CATGTGTCCTCGCCCAAGTA+GGG | + | chr7_2:84585135-84585154 | None:intergenic | 55.0% | |
| AAGTTACCCTGCCGAACCCT+GGG | + | chr7_2:84585556-84585575 | None:intergenic | 55.0% | |
| AAAGTTACCCTGCCGAACCC+TGG | + | chr7_2:84585557-84585576 | None:intergenic | 55.0% | |
| ! | TGCCGACGACATTTCTGGGA+AGG | - | chr7_2:84586480-84586499 | Msa1084300:intron | 55.0% |
| ACTGGACAATCAGGTCGCAC+TGG | + | chr7_2:84586626-84586645 | None:intergenic | 55.0% | |
| AGTGCGACCTGATTGTCCAG+TGG | - | chr7_2:84586625-84586644 | Msa1084300:intron | 55.0% | |
| GAGCTCACCACTGGACAATC+AGG | + | chr7_2:84586635-84586654 | None:intergenic | 55.0% | |
| CCCGGGTAAGAGCTTCATGA+GGG | + | chr7_2:84587037-84587056 | None:intergenic | 55.0% | |
| CCCTCATGAAGCTCTTACCC+GGG | - | chr7_2:84587034-84587053 | Msa1084300:CDS | 55.0% | |
| CCACACGGCTCGAATGTTGA+TGG | + | chr7_2:84587696-84587715 | None:intergenic | 55.0% | |
| CCATCAACATTCGAGCCGTG+TGG | - | chr7_2:84587693-84587712 | Msa1084300:intron | 55.0% | |
| GCATCGCTTCCTCCAGCAAA+TGG | + | chr7_2:84587888-84587907 | None:intergenic | 55.0% | |
| GCCGAAGGATGCAATGCTGA+AGG | - | chr7_2:84587906-84587925 | Msa1084300:intron | 55.0% | |
| ! | GGATGCAATGCTGAAGGCAC+GGG | - | chr7_2:84587912-84587931 | Msa1084300:intron | 55.0% |
| ! | GATGCAATGCTGAAGGCACG+GGG | - | chr7_2:84587913-84587932 | Msa1084300:intron | 55.0% |
| !! | GGTACGGCTGATGGTGGTGA+TGG | + | chr7_2:84584209-84584228 | None:intergenic | 60.0% |
| ! | AGAGGGAGAGGTACGGCTGA+TGG | + | chr7_2:84584218-84584237 | None:intergenic | 60.0% |
| ! | GTGGTGCTGGGAGGGAAAGA+GGG | + | chr7_2:84584235-84584254 | None:intergenic | 60.0% |
| !! | AGGTTGGTGGTGGTGGTGCT+GGG | + | chr7_2:84584247-84584266 | None:intergenic | 60.0% |
| !! | CGAGATGAGGTTGGTGGTGG+TGG | + | chr7_2:84584254-84584273 | None:intergenic | 60.0% |
| AGACGGCGAGATGAGGTTGG+TGG | + | chr7_2:84584260-84584279 | None:intergenic | 60.0% | |
| GGAAGACGGCGAGATGAGGT+TGG | + | chr7_2:84584263-84584282 | None:intergenic | 60.0% | |
| TGGTGGAAGACGGCGAGATG+AGG | + | chr7_2:84584267-84584286 | None:intergenic | 60.0% | |
| !! | TCCAGCACGGTGGTGGAAGA+CGG | + | chr7_2:84584277-84584296 | None:intergenic | 60.0% |
| GCATGTGTCCTCGCCCAAGT+AGG | + | chr7_2:84585136-84585155 | None:intergenic | 60.0% | |
| AGTTACCCTGCCGAACCCTG+GGG | + | chr7_2:84585555-84585574 | None:intergenic | 60.0% | |
| GCCCGGGTAAGAGCTTCATG+AGG | + | chr7_2:84587038-84587057 | None:intergenic | 60.0% | |
| ! | GGGAGAGGTACGGCTGATGG+TGG | + | chr7_2:84584215-84584234 | None:intergenic | 65.0% |
| GCTGGGAGGGAAAGAGGGAG+AGG | + | chr7_2:84584230-84584249 | None:intergenic | 65.0% | |
| ! | GGTGGTGCTGGGAGGGAAAG+AGG | + | chr7_2:84584236-84584255 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGTGCTGGGA+GGG | + | chr7_2:84584243-84584262 | None:intergenic | 65.0% |
| !! | TTGGTGGTGGTGGTGCTGGG+AGG | + | chr7_2:84584244-84584263 | None:intergenic | 65.0% |
| !! | GAGGTTGGTGGTGGTGGTGC+TGG | + | chr7_2:84584248-84584267 | None:intergenic | 65.0% |
| !! | CGGCGAGATGAGGTTGGTGG+TGG | + | chr7_2:84584257-84584276 | None:intergenic | 65.0% |
| TCCACCACCGTGCTGGACAC+CGG | - | chr7_2:84584280-84584299 | Msa1084300:CDS | 65.0% | |
| TCTTCCGGTGTCCAGCACGG+TGG | + | chr7_2:84584287-84584306 | None:intergenic | 65.0% | |
| GCTGGAGGAAGCGATGCCGA+AGG | - | chr7_2:84587891-84587910 | Msa1084300:intron | 65.0% | |
| ! | TTGAGCGGCGGCCTTTTCCC+AGG | + | chr7_2:84588433-84588452 | None:intergenic | 65.0% |
| GCCGTCTTCCACCACCGTGC+TGG | - | chr7_2:84584273-84584292 | Msa1084300:CDS | 70.0% | |
| TCCGGTGTCCAGCACGGTGG+TGG | + | chr7_2:84584284-84584303 | None:intergenic | 70.0% | |
| GGGTTGCAGGCCCCAGGGTT+CGG | - | chr7_2:84585542-84585561 | Msa1084300:intron | 70.0% | |
| AGCAGGGGGTTGCAGGCCCC+AGG | - | chr7_2:84585536-84585555 | Msa1084300:intron | 75.0% | |
| GCAGGGGGTTGCAGGCCCCA+GGG | - | chr7_2:84585537-84585556 | Msa1084300:intron | 75.0% | |
| TGCAGGCCCCAGGGTTCGGC+AGG | - | chr7_2:84585546-84585565 | Msa1084300:intron | 75.0% | |
| GCAGGCCCCAGGGTTCGGCA+GGG | - | chr7_2:84585547-84585566 | Msa1084300:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84584164 | 84588581 | 84584164 | ID=Msa1084300;Name=Msa1084300 |
| chr7_2 | mRNA | 84584164 | 84588581 | 84584164 | ID=Msa1084300-mRNA-1;Parent=Msa1084300;Name=Msa1084300-mRNA-1;_AED=0.24;_eAED=0.18;_QI=0|0.8|0.63|0.90|1|1|11|81|424 |
| chr7_2 | exon | 84584164 | 84584400 | 84584164 | ID=Msa1084300-mRNA-1:exon:22698;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84584618 | 84584881 | 84584618 | ID=Msa1084300-mRNA-1:exon:22697;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84584963 | 84585071 | 84584963 | ID=Msa1084300-mRNA-1:exon:22696;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84585219 | 84585343 | 84585219 | ID=Msa1084300-mRNA-1:exon:22695;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84585936 | 84586025 | 84585936 | ID=Msa1084300-mRNA-1:exon:22694;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84586099 | 84586161 | 84586099 | ID=Msa1084300-mRNA-1:exon:22693;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84586244 | 84586335 | 84586244 | ID=Msa1084300-mRNA-1:exon:22692;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84587005 | 84587086 | 84587005 | ID=Msa1084300-mRNA-1:exon:22691;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84587514 | 84587578 | 84587514 | ID=Msa1084300-mRNA-1:exon:22690;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84587638 | 84587687 | 84587638 | ID=Msa1084300-mRNA-1:exon:22689;Parent=Msa1084300-mRNA-1 |
| chr7_2 | exon | 84588403 | 84588581 | 84588403 | ID=Msa1084300-mRNA-1:exon:22688;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84588403 | 84588581 | 84588403 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84587638 | 84587687 | 84587638 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84587514 | 84587578 | 84587514 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84587005 | 84587086 | 84587005 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84586244 | 84586335 | 84586244 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84586099 | 84586161 | 84586099 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84585936 | 84586025 | 84585936 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84585219 | 84585343 | 84585219 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84584963 | 84585071 | 84584963 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84584618 | 84584881 | 84584618 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | CDS | 84584245 | 84584400 | 84584245 | ID=Msa1084300-mRNA-1:cds;Parent=Msa1084300-mRNA-1 |
| chr7_2 | three_prime_UTR | 84584164 | 84584244 | 84584164 | ID=Msa1084300-mRNA-1:three_prime_utr;Parent=Msa1084300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
