AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1251890


Find 248 sgRNAs with CRISPR-Local

Find 3056 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_2 gene 48433683 48480445 48433683 ID=Msa1251890;Name=Msa1251890
chr8_2 mRNA 48433683 48480445 48433683 ID=Msa1251890-mRNA-1;Parent=Msa1251890;Name=Msa1251890-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0.04|0|1|0.23|0.13|22|0|1220
chr8_2 exon 48480202 48480445 48480202 ID=Msa1251890-mRNA-1:exon:14619;Parent=Msa1251890-mRNA-1
chr8_2 exon 48480012 48480147 48480012 ID=Msa1251890-mRNA-1:exon:14618;Parent=Msa1251890-mRNA-1
chr8_2 exon 48478253 48478291 48478253 ID=Msa1251890-mRNA-1:exon:14617;Parent=Msa1251890-mRNA-1
chr8_2 exon 48478009 48478198 48478009 ID=Msa1251890-mRNA-1:exon:14616;Parent=Msa1251890-mRNA-1
chr8_2 exon 48475969 48476206 48475969 ID=Msa1251890-mRNA-1:exon:14615;Parent=Msa1251890-mRNA-1
chr8_2 exon 48467961 48468101 48467961 ID=Msa1251890-mRNA-1:exon:14614;Parent=Msa1251890-mRNA-1
chr8_2 exon 48467771 48467954 48467771 ID=Msa1251890-mRNA-1:exon:14613;Parent=Msa1251890-mRNA-1
chr8_2 exon 48458348 48458565 48458348 ID=Msa1251890-mRNA-1:exon:14612;Parent=Msa1251890-mRNA-1
chr8_2 exon 48457898 48457962 48457898 ID=Msa1251890-mRNA-1:exon:14611;Parent=Msa1251890-mRNA-1
chr8_2 exon 48456720 48456962 48456720 ID=Msa1251890-mRNA-1:exon:14610;Parent=Msa1251890-mRNA-1
chr8_2 exon 48453558 48453765 48453558 ID=Msa1251890-mRNA-1:exon:14609;Parent=Msa1251890-mRNA-1
chr8_2 exon 48450777 48450938 48450777 ID=Msa1251890-mRNA-1:exon:14608;Parent=Msa1251890-mRNA-1
chr8_2 exon 48449853 48450008 48449853 ID=Msa1251890-mRNA-1:exon:14607;Parent=Msa1251890-mRNA-1
chr8_2 exon 48444357 48444523 48444357 ID=Msa1251890-mRNA-1:exon:14606;Parent=Msa1251890-mRNA-1
chr8_2 exon 48443668 48443823 48443668 ID=Msa1251890-mRNA-1:exon:14605;Parent=Msa1251890-mRNA-1
chr8_2 exon 48443531 48443594 48443531 ID=Msa1251890-mRNA-1:exon:14604;Parent=Msa1251890-mRNA-1
chr8_2 exon 48437464 48437628 48437464 ID=Msa1251890-mRNA-1:exon:14603;Parent=Msa1251890-mRNA-1
chr8_2 exon 48437210 48437442 48437210 ID=Msa1251890-mRNA-1:exon:14602;Parent=Msa1251890-mRNA-1
chr8_2 exon 48435641 48435772 48435641 ID=Msa1251890-mRNA-1:exon:14601;Parent=Msa1251890-mRNA-1
chr8_2 exon 48435469 48435628 48435469 ID=Msa1251890-mRNA-1:exon:14600;Parent=Msa1251890-mRNA-1
chr8_2 exon 48435133 48435197 48435133 ID=Msa1251890-mRNA-1:exon:14599;Parent=Msa1251890-mRNA-1
chr8_2 exon 48433683 48433979 48433683 ID=Msa1251890-mRNA-1:exon:14598;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48480202 48480445 48480202 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48480012 48480147 48480012 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48478253 48478291 48478253 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48478009 48478198 48478009 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48475969 48476206 48475969 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48467961 48468101 48467961 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48467771 48467954 48467771 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48458348 48458565 48458348 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48457898 48457962 48457898 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48456720 48456962 48456720 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48453558 48453765 48453558 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48450777 48450938 48450777 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48449853 48450008 48449853 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48444357 48444523 48444357 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48443668 48443823 48443668 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48443531 48443594 48443531 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48437464 48437628 48437464 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48437210 48437442 48437210 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48435641 48435772 48435641 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48435469 48435628 48435469 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48435133 48435197 48435133 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
chr8_2 CDS 48433683 48433979 48433683 ID=Msa1251890-mRNA-1:cds;Parent=Msa1251890-mRNA-1
Gene Sequence

>Msa1251890

GGTTTTCAAGTTGAGATGGCCAACAACATTTCTAACGTGGTAGAGTTGGGTGAGGTTGAAGAAAGTTTCGTACATGCTACACAACTTATCTACGCTATTGCACTACCAATGGCACTACAATCAGCAACTGAGCTTGGTATATTTGATGTGTTGCAAAAAGCTGGCAAAGACGCTCAACTTTCTACTGATGAGATTGCGTCTCGTATTTCATGCAACAATCCTGATGCTCCCAGAATGTTAGATCATGAACAAAAGCTTGGATCCTTTCATAGACTTTATAGTATGACTCCTGTTGCTAGATTTTTTGTTCCTGATTCTGATGGTGTTTCATTAGGACCATTGTTGGCTTTGGTTCAAGATAATGTCTCTTTAGCTAGCTGGTCCGAGCTTAAGAATGCAATTCGAGAAGGGGGTACTCCGTTCAACCAAGTTTTAAATATTGCCATGGATAATCATAGCCAAATAGTCATGAGAAAAGTTCTTGAATGTTACAAAGGTTTCGAGGACATAAAAAGGCTTGTGGATATTGGAGGTGGTCTTGGGGTCAACATTCACTTGATCACTTCCAAGTACCCACATATACATGGTATCAATTTCGACTTGCCTCATTGGATACTCCATGATTGGAGTGATGAGCATTGCTTAAAGATCTTGAAGAACTGTTATGATGCTCTCCCTGACCAAGGAAGGGTGATTGTTGTAGAGGTACTTCGTCCTATTATACCTGCAAATAGTTTAGCTTCCAAGTCTACCTCGCAATTGGATGTTACGATGATGACTCTAATCCCAGGAGCAAAAGAGCGAAATAGACAAGAATTCATGGATTTGGCTACCAATGCTGGATTTATGAAAGAAGATAATGTGAAAGAAGAACAAGAAGATGAAGAAAGTTTCTTATATGCTATACAGCTTTGCAACTCTATGGTGCTACCAATGGTACTCCATTCTGCAACTGAGCTTGGTGTATTTGATGTATTGCAAAAAGCTGGTGCTCAACTCTCTGCCGATGAGATTGCGTCTCGTCTTTCATGCAACAATCCTGATGCTCCCAAAATGTTGGATCGCATTCTTGCTGTTCTTGCATCCCATGATGTGTTAAAGTGTATGGTCATTCAAGATGAACAAAAGCTTGGATCCTTTCACAGACTTTATAGTATGACTCCTGTTGCTAGGTTCAACCAAGTTTTCAATACAGCGATGATCAACCATACCAAGATAGTTATGAACAAGGTTCTTGAGAGTTACAAGGGTTTCAAGGACATAAGAAGGCTTGTTGATGTTGGAGGTGGTCTTGGGGTCAACATTAACTTGGTCACTTCTAAACACCCACATATCCAGGGTATCAATTTTGATTTACCTCATGTCATTCAACATGCCCCTTCTTATCCTGGAGTCGAACACATCGGAGGAGATATGTTTAAAAGTGTGCCAAAAGCAGATGCCATCTTTATGAAGTGGATACTACATGATTGGAGCGACGATAATTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATTCCTGATGATGGAAAGGTGATTGTTTTGGAGGCATTTCTTCCTATTATACCTGATAATGGTTATGCTTCAAGGTCTACATCCCAATTAGATGTTTTGATGATGACTATAAACCCAGGAGGAAAAGAGCGAAATAAGCAAGAATACATGGATTTGGCAACTAAAGTTGGATTTAGTGACAATTGTTATGATGCTATCCCTAATGATGGGAAGGTGATTGTTTTAGAGGGACATATTCCCACTGTGCATGAGAATGATTATGCTTCGAAGTCTACCTCTCAATTAGATGTTCTGATGATGACTCAAACCCCGGGAGGAAAAGAGAGAACTAAGCAAGAATTTCTTGATTTGGCAACTAGAGCTGGATTTAGGGGCATCAAATATGAATTTGAGATGGCCAATCTTTTTAATGTGAAAGAAGAACATGAATTAGAAGATGAAGAAAGTTTCTTATATGCTATACAGCTCTGCAACTCTAGGGTGCTACCAATGGTACTCCATTCTGCAACTGAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGGTAAAGTTGAGATGGCCAATCTTTCTAATGTGAAAGAAGAACATGAATTAGAAGATGAAGAAAGTTTCTTATATGCTATACACCTTTGCAACTCTATGGTGCTACCAATGGCACTCCAATCTGCAACTGAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGCCATGATCAGTTATACCAAAATAGTTATGAACAAGTTTCTTGAGAGCTACAATGGTTTCAAGGGCATAAAAAGGCTCGTTGATGTTGGAGGTGGTCTTGGGGTTAGCATTAACTTGATCACTTCAAAACACCCTGATATATATGGTATCAATTTTGACTTGCCTCATTGCATACTCCATGATTGGAGTGATGAGCTCTGCTTAAAGTTTTTGAAGAATTGTTATGATGCTATCCCTGATGATGGAAAGATGGTTGTTTTAGAGGCACATATTTCCATTGTTCCTGCGAATGATTATGCTTCGAAGTCTACCTCCCAATTAGATTTGGATTTAGAGGCGTCAAATATGAATGTTGCGTTTGCAACTTATGGGTTATGGAGTTCTTTAAACATAGGTCATGTGAATGGAAATGGAGGGAGGAGATCAAAAGAACAAGAATTAGAAGATGAAGAAAGTTTCTCATATGCTATACAGCTTGGTAGCTCTATGGTGCTACCAATGGTACTCCATTCTGCAAGTCAGCTTGGTGTATTTGATGTGTTGCAAAAAGCTGCCGATGAGATTGCGTCTCGTATTTCTTGCAACAATCCTGATGCTCCCAAAATGTTGGATCGTATTCTTGCTCTTCTTGCCTCACATGATGTGTTAAAGTGTTTGGTCATTCAAGATGAACAAAAGCTTGGATCATTTCATAGACTTTATAGTATGGCTCCTGTTGCTAGGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCATTGTTGGCTTTGATTCAAGATAATCTTAATAATGCAATTCGAGAAGGGGGTGTCCCATTCAACATGGTTCATGGCACACATGCCTTTGATTATCCAAGCTTGGACTCAAGGTTCAACAAAGTTTTCAATACAGCTATGATCAATCATACCAAAATAGTTCTTGAGAGCTACAATGGTTTCAAGGACATAAAAAAGCTTGTTGATGTTGGAGGTGGTCTTGGGGTTAACATTAACTTGATCACATCAAAATACCCTAATATACATGGTATCAATTTCGACTTGCCTCATGTCATTCAACATGCCCCTTCTTATCCTGGAGTTGAACATGTTGGTGGAGATATGTTTAAAAGTGTGCCTAAAGGAGATGCCATCTTTATGAAGTGGATACTCCATGATTGGAGTGATGAGCACTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATCTCTAATGATGGGAAGGTGATTGTTTTAGAGGCACATATTCCCATTGTGCCCGAGAATGGTTATGCTTCAAAGTCTACTGCCCAATTAGATGTTCTGATGATGACTCAAAACCCAGGAGGAAAAGAGAGAACTAAGCAAGAATTCATTGATTTGGCAACTAGAGTTGGATTTAGAGGCATAAAATATGAATGTTGTGTTCGTAACTTCTGGGTTATGGAGTTCTTTAAGTGA

Protein sequence

>Msa1251890

GFQVEMANNISNVVELGEVEESFVHATQLIYAIALPMALQSATELGIFDVLQKAGKDAQLSTDEIASRISCNNPDAPRMLDHEQKLGSFHRLYSMTPVARFFVPDSDGVSLGPLLALVQDNVSLASWSELKNAIREGGTPFNQVLNIAMDNHSQIVMRKVLECYKGFEDIKRLVDIGGGLGVNIHLITSKYPHIHGINFDLPHWILHDWSDEHCLKILKNCYDALPDQGRVIVVEVLRPIIPANSLASKSTSQLDVTMMTLIPGAKERNRQEFMDLATNAGFMKEDNVKEEQEDEESFLYAIQLCNSMVLPMVLHSATELGVFDVLQKAGAQLSADEIASRLSCNNPDAPKMLDRILAVLASHDVLKCMVIQDEQKLGSFHRLYSMTPVARFNQVFNTAMINHTKIVMNKVLESYKGFKDIRRLVDVGGGLGVNINLVTSKHPHIQGINFDLPHVIQHAPSYPGVEHIGGDMFKSVPKADAIFMKWILHDWSDDNCLKLLKNCYDAIPDDGKVIVLEAFLPIIPDNGYASRSTSQLDVLMMTINPGGKERNKQEYMDLATKVGFSDNCYDAIPNDGKVIVLEGHIPTVHENDYASKSTSQLDVLMMTQTPGGKERTKQEFLDLATRAGFRGIKYEFEMANLFNVKEEHELEDEESFLYAIQLCNSRVLPMVLHSATELGVFDVLQKAGKVEMANLSNVKEEHELEDEESFLYAIHLCNSMVLPMALQSATELGVFDVLQKAAMISYTKIVMNKFLESYNGFKGIKRLVDVGGGLGVSINLITSKHPDIYGINFDLPHCILHDWSDELCLKFLKNCYDAIPDDGKMVVLEAHISIVPANDYASKSTSQLDLDLEASNMNVAFATYGLWSSLNIGHVNGNGGRRSKEQELEDEESFSYAIQLGSSMVLPMVLHSASQLGVFDVLQKAADEIASRISCNNPDAPKMLDRILALLASHDVLKCLVIQDEQKLGSFHRLYSMAPVARFFAPNSDGVSLGPLLALIQDNLNNAIREGGVPFNMVHGTHAFDYPSLDSRFNKVFNTAMINHTKIVLESYNGFKDIKKLVDVGGGLGVNINLITSKYPNIHGINFDLPHVIQHAPSYPGVEHVGGDMFKSVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAISNDGKVIVLEAHIPIVPENGYASKSTAQLDVLMMTQNPGGKERTKQEFIDLATRVGFRGIKYECCVRNFWVMEFFK*