AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203840 MtrunA17_Chr8g0375081 94.428 664 21 2 1 649 1 663 0.0 1281
Msa1203840 MtrunA17_Chr5g0402211 67.988 681 168 7 1 649 1 663 0.0 919
Msa1203840 MtrunA17_Chr4g0010391 52.955 423 170 7 77 480 51 463 1.06e-131 395
Msa1203840 MtrunA17_Chr5g0399671 26.166 386 245 14 70 433 33 400 3.28e-21 96.7
Msa1203840 MtrunA17_Chr5g0399661 26.359 368 224 14 75 417 34 379 4.37e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203840 AT5G67030.1 64.103 663 215 7 1 644 1 659 0.0 841
Msa1203840 AT5G67030.2 65.195 589 183 6 1 571 1 585 0.0 748
Msa1203840 AT2G35660.1 26.904 394 227 16 51 413 17 380 8.18e-17 84.0
Msa1203840 AT2G29720.1 26.616 263 160 7 188 426 138 391 9.41e-16 80.5
Msa1203840 AT5G05320.1 24.863 366 223 14 83 416 9 354 2.82e-15 79.0
Msa1203840 AT2G35660.2 28.736 261 145 9 179 416 27 269 6.61e-15 76.6
Msa1203840 AT2G35660.3 28.736 261 145 9 179 416 27 269 6.61e-15 76.6
Msa1203840 AT4G38540.1 25.543 368 220 15 83 416 9 356 6.82e-14 74.7

Find 197 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCATCCTTTGGATATT+TGG 0.045763 8_1:-59016710 Msa1203840:three_prime_UTR
GGTCTTGTTGATGGAGTTTC+TGG 0.107276 8_1:-59022055 Msa1203840:CDS
AGGGCTGAATCAACCTTAAT+TGG 0.126115 8_1:+59018995 None:intergenic
ACAGAATACCGACATTTAAA+TGG 0.190529 8_1:-59019715 Msa1203840:CDS
TTCTCATCCTTTGGATATTT+GGG 0.197955 8_1:-59016709 Msa1203840:three_prime_UTR
TTTATTTGTGATTTACAAAA+TGG 0.216266 8_1:-59016784 Msa1203840:three_prime_UTR
TTGATGGAGTTTCTGGTTCT+TGG 0.216760 8_1:-59022048 Msa1203840:intron
ATTATTGTAAAATAAATTAA+AGG 0.217578 8_1:+59022776 None:intergenic
CATCCTCCTTGGCCCATATT+TGG 0.224325 8_1:+59019644 None:intergenic
CCATGCCATGCAGCCAAATA+TGG 0.234270 8_1:-59019657 Msa1203840:CDS
TTTGTGTTTGTGTTTGTTCT+TGG 0.238808 8_1:-59022586 Msa1203840:five_prime_UTR
AGCTTACTTAAACTATTCTT+TGG 0.245551 8_1:-59020069 Msa1203840:CDS
TGGACACGAGCAGGGTAATT+TGG 0.259273 8_1:+59017231 None:intergenic
TCAACTTCTTTCTCATCCTT+TGG 0.267666 8_1:-59016718 Msa1203840:three_prime_UTR
ATTACTGGTGATAGAATTAA+TGG 0.268199 8_1:-59022076 Msa1203840:CDS
TCCGAGAGCCTGCAACTTAT+TGG 0.279007 8_1:+59018167 None:intergenic
TAAATCAGGGAACCCAATTA+AGG 0.287563 8_1:-59019008 Msa1203840:CDS
ATGACCATTTGATAGATCTT+AGG 0.287721 8_1:-59016624 Msa1203840:three_prime_UTR
ATAAGGTATGTTACCTCCTT+AGG 0.292414 8_1:+59018975 None:intergenic
AAGGTTGCTCAAGATATTTA+AGG 0.302601 8_1:-59019810 Msa1203840:CDS
CCATATGATGTTCTTCAGTT+TGG 0.302837 8_1:-59017207 Msa1203840:CDS
ATGAGAGTTGGTTGTATTAC+TGG 0.312017 8_1:-59022091 Msa1203840:CDS
AACCTCCCTCCAACTCTTCC+AGG 0.317004 8_1:+59018351 None:intergenic
GTCTATGTTGAGCTGGATCT+TGG 0.324946 8_1:-59018307 Msa1203840:CDS
GAGATGAAACCCTGCATAAT+CGG 0.328359 8_1:-59017779 Msa1203840:CDS
AGGTGTTGGTCTTGGTCCTT+TGG 0.330707 8_1:-59018508 Msa1203840:CDS
AGGGCAACTATTATTATTAG+AGG 0.331542 8_1:+59022796 None:intergenic
GGGAAGGTACCGAGTATTCT+TGG 0.333711 8_1:-59020048 Msa1203840:CDS
CTTGTAGCAGGTGGTGGAAT+TGG 0.337458 8_1:-59022283 Msa1203840:CDS
AAGGTGAGAAGAAGAATCTT+AGG 0.348933 8_1:-59022309 Msa1203840:CDS
GAGTAATGCTTTGGCTGCTT+TGG 0.349359 8_1:-59022146 Msa1203840:CDS
TCATCCTTCTTCGCGATGCT+TGG 0.364245 8_1:+59017030 None:intergenic
CTAGAACCATTCATTAATAA+TGG 0.366611 8_1:+59016675 None:intergenic
TGCAAAATTAACGACATTAC+TGG 0.367981 8_1:+59020964 None:intergenic
GCTGGATCTTGGGTGGAAAT+AGG 0.369630 8_1:-59018296 Msa1203840:intron
GCAGGTTTCATTTCGAGTTA+AGG 0.373966 8_1:-59017067 Msa1203840:intron
TGGGAACAAAGTATTAAATC+AGG 0.382091 8_1:-59019022 Msa1203840:CDS
CAATGAAAAGTCTTTGTTTG+TGG 0.384730 8_1:+59022459 None:intergenic
CAGAATACCGACATTTAAAT+GGG 0.387171 8_1:-59019714 Msa1203840:CDS
CCAAACTGAAGAACATCATA+TGG 0.388753 8_1:+59017207 None:intergenic
AGAATTAATGGTCTTGTTGA+TGG 0.394310 8_1:-59022064 Msa1203840:CDS
TGCAGTGGAACGTGGTCTTC+CGG 0.396487 8_1:-59021062 Msa1203840:CDS
CATTATATTTGCAGTATTGA+AGG 0.397762 8_1:-59017273 Msa1203840:intron
AAGGTAGACCAATAAGTTGC+AGG 0.399484 8_1:-59018175 Msa1203840:CDS
CCATGATATTTACTTGAGTA+AGG 0.401078 8_1:-59016601 Msa1203840:three_prime_UTR
GTTACACAGCACAAATTTGC+AGG 0.401598 8_1:-59016944 Msa1203840:three_prime_UTR
CAATGGCCATGCATCCTCCT+TGG 0.403273 8_1:+59019633 None:intergenic
TTATTGTAAAATAAATTAAA+GGG 0.408782 8_1:+59022777 None:intergenic
ACATGAATGGGAGTGCTTGT+AGG 0.415467 8_1:+59016891 None:intergenic
AATGAAAAGTCTTTGTTTGT+GGG 0.415804 8_1:+59022460 None:intergenic
AGGTGGTGGAATTGGTGGAT+TGG 0.416278 8_1:-59022275 Msa1203840:CDS
CTTGAGAATGATGCTGTAGA+TGG 0.416671 8_1:+59022499 None:intergenic
CATCCTTTGGATATTTGGGC+TGG 0.420832 8_1:-59016705 Msa1203840:three_prime_UTR
GCACTTGAGCGTGCTATTAA+CGG 0.420952 8_1:-59017969 Msa1203840:CDS
GGGCTGAATCAACCTTAATT+GGG 0.424670 8_1:+59018996 None:intergenic
GCATTACTCTGTATCTGAAT+AGG 0.430156 8_1:+59022160 None:intergenic
AAGGGTCGTGTTACTTTGCT+TGG 0.430187 8_1:-59019689 Msa1203840:CDS
TCAGATACAGAGTAATGCTT+TGG 0.442106 8_1:-59022155 Msa1203840:CDS
TGGTTGGAGCAGATGGTATA+TGG 0.443038 8_1:-59020746 Msa1203840:CDS
TTACCATGTGGAGAGGAAAC+AGG 0.444036 8_1:-59017833 Msa1203840:CDS
CTGCTGACATTGAATCTGTT+GGG 0.448523 8_1:-59020182 Msa1203840:intron
ACTATTATTATTAGAGGTTG+AGG 0.449176 8_1:+59022802 None:intergenic
GGAAGGTACCGAGTATTCTT+GGG 0.449532 8_1:-59020047 Msa1203840:CDS
GCATATCTAGGTGTTGGTCT+TGG 0.449896 8_1:-59018516 Msa1203840:CDS
GCTTACTTAAACTATTCTTT+GGG 0.454552 8_1:-59020068 Msa1203840:CDS
TACTTTGTATCTTCAGATGT+TGG 0.454646 8_1:-59020014 Msa1203840:CDS
TTAGCACCATTATTAATGAA+TGG 0.456923 8_1:-59016681 Msa1203840:three_prime_UTR
AAAATATGAAGGAGACCTAT+TGG 0.457453 8_1:-59020766 Msa1203840:CDS
GCTTTGGCTGCAAAGAGAAA+AGG 0.457691 8_1:-59022247 Msa1203840:CDS
TGTTTGTGGGAATTGAGAAA+AGG 0.460698 8_1:+59022473 None:intergenic
GACCTATTGGTTGGAGCAGA+TGG 0.462758 8_1:-59020753 Msa1203840:CDS
AGGTTGCTCAAGATATTTAA+GGG 0.464153 8_1:-59019809 Msa1203840:CDS
TCCACTTACAAGGCATATCT+AGG 0.464186 8_1:-59018528 Msa1203840:CDS
GTTTGTGGGAATTGAGAAAA+GGG 0.464297 8_1:+59022474 None:intergenic
ACCAATAAGTTGCAGGCTCT+CGG 0.466964 8_1:-59018168 Msa1203840:CDS
CGCTCCAAGCATCGCGAAGA+AGG 0.469084 8_1:-59017034 Msa1203840:CDS
TGCTCAAGATATTTAAGGGC+TGG 0.472538 8_1:-59019805 Msa1203840:CDS
AATCTTAGGGTGCTTGTAGC+AGG 0.473544 8_1:-59022295 Msa1203840:CDS
TGTTGGTCTTGGTCCTTTGG+AGG 0.476404 8_1:-59018505 Msa1203840:intron
TCTATGTTGAGCTGGATCTT+GGG 0.477932 8_1:-59018306 Msa1203840:CDS
GTATTGAAGGAAAGCGATAC+CGG 0.478385 8_1:-59017260 Msa1203840:CDS
GGCTAGAATGGCAGCTCTGA+TGG 0.480784 8_1:-59018553 Msa1203840:CDS
AGATGAAACCCTGCATAATC+GGG 0.484055 8_1:-59017778 Msa1203840:intron
GGATCCCTTGCAAAGTCATT+CGG 0.484452 8_1:+59021023 None:intergenic
CCTGCTGACATTGAATCTGT+TGG 0.485317 8_1:-59020183 Msa1203840:CDS
CATGCCATGCAGCCAAATAT+GGG 0.485965 8_1:-59019656 Msa1203840:CDS
GGGATCCTTGCTCGTGCAGT+TGG 0.490259 8_1:-59021007 Msa1203840:CDS
AGGGTGCTTGTAGCAGGTGG+TGG 0.491600 8_1:-59022289 Msa1203840:CDS
TCATATGGGTGGACACGAGC+AGG 0.492859 8_1:+59017222 None:intergenic
TACCATCTGCTCCAACCAAT+AGG 0.492982 8_1:+59020751 None:intergenic
TAAGGTATGTTACCTCCTTA+GGG 0.493151 8_1:+59018976 None:intergenic
ACCTAGATATGCCTTGTAAG+TGG 0.501034 8_1:+59018527 None:intergenic
CCCTTTCCCCATTTAAATGT+CGG 0.502490 8_1:+59019707 None:intergenic
TTATTTATTACGCAGGCAAA+CGG 0.503314 8_1:-59018023 Msa1203840:intron
TTGAGTGCTGTGAGAGGAGA+GGG 0.503382 8_1:-59022196 Msa1203840:CDS
GAGAAAAGGATTTGAAGTGA+TGG 0.503804 8_1:-59022233 Msa1203840:CDS
AGAGGAGAGGGACAGTATAG+AGG 0.505969 8_1:-59022184 Msa1203840:CDS
TTGGCCCATATTTGGCTGCA+TGG 0.506205 8_1:+59019652 None:intergenic
CCTCATCCTGGAAGAGTTGG+AGG 0.506956 8_1:-59018357 Msa1203840:CDS
CTGCGAGTTGCAGTTATTCA+CGG 0.507455 8_1:-59018579 Msa1203840:CDS
ATTCGGTTCATCAGCACCAC+CGG 0.508435 8_1:+59019950 None:intergenic
TATTCACGGGATGGCTAGAA+TGG 0.508646 8_1:-59018565 Msa1203840:CDS
CATCATCATCTTCAAACCAT+TGG 0.509688 8_1:+59017991 None:intergenic
CAAAGGAGTTGGACAATGCA+TGG 0.510736 8_1:-59019042 Msa1203840:CDS
CCATATTTGGCTGCATGGCA+TGG 0.514534 8_1:+59019657 None:intergenic
GTAGCAGGTGGTGGAATTGG+TGG 0.516389 8_1:-59022280 Msa1203840:CDS
ATTCAATGAGTTGTAACATA+AGG 0.518245 8_1:+59022522 None:intergenic
TTTGTATCTTCAGATGTTGG+AGG 0.518609 8_1:-59020011 Msa1203840:CDS
ATTAGCCGAATGACTTTGCA+AGG 0.522092 8_1:-59021028 Msa1203840:CDS
TTATCAACTTGCAAAGGAGT+TGG 0.523536 8_1:-59019053 Msa1203840:CDS
TTGAATGGAGTGACCATGGA+AGG 0.526563 8_1:-59016839 Msa1203840:three_prime_UTR
ATGGCCTAAGATCTATCAAA+TGG 0.527474 8_1:+59016620 None:intergenic
TGCAGGAGTGCAGTGCAAGA+GGG 0.528321 8_1:-59017593 Msa1203840:intron
CCGCATATCAGTTACGAAGA+AGG 0.528473 8_1:+59017400 None:intergenic
GCTGATGAAGTTATGAGAGT+TGG 0.529848 8_1:-59022103 Msa1203840:CDS
TATGAAGGAGACCTATTGGT+TGG 0.530003 8_1:-59020762 Msa1203840:CDS
AAGAGAAATATATACCTCAA+TGG 0.531706 8_1:+59019616 None:intergenic
TGCGGAGTGAACATGGCACT+TGG 0.532423 8_1:-59017382 Msa1203840:CDS
TGATGCCGTCTATGTTGAGC+TGG 0.533051 8_1:-59018314 Msa1203840:CDS
ATGATATTTACTTGAGTAAG+GGG 0.533570 8_1:-59016599 Msa1203840:three_prime_UTR
GGAAGACCACGTTCCACTGC+AGG 0.534367 8_1:+59021064 None:intergenic
TGCGAGTTGCAGTTATTCAC+GGG 0.536880 8_1:-59018578 Msa1203840:CDS
TCTGATGGCTTCCACTTACA+AGG 0.538355 8_1:-59018538 Msa1203840:CDS
ACCGACATTTAAATGGGGAA+AGG 0.538718 8_1:-59019708 Msa1203840:CDS
CCGACATTTAAATGGGGAAA+GGG 0.542332 8_1:-59019707 Msa1203840:CDS
TCTTCAGTTTGGTTCTGAGA+AGG 0.544271 8_1:-59017196 Msa1203840:intron
CCTTACTCAAGTAAATATCA+TGG 0.545018 8_1:+59016601 None:intergenic
GTAGGCATACCCGATTATGC+AGG 0.545437 8_1:+59017769 None:intergenic
ATTTAAGTTCCTACCTCCAA+AGG 0.549688 8_1:+59018492 None:intergenic
AGGTGAGAAGAAGAATCTTA+GGG 0.549882 8_1:-59022308 Msa1203840:CDS
AGGATGAGGTATGCGAAAGT+TGG 0.550467 8_1:+59018371 None:intergenic
TAGTAAATTCGAGCATGCGT+TGG 0.552353 8_1:+59017434 None:intergenic
CATGATATTTACTTGAGTAA+GGG 0.556833 8_1:-59016600 Msa1203840:three_prime_UTR
AACTTTCGCATACCTCATCC+TGG 0.558624 8_1:-59018369 Msa1203840:CDS
CCTCCAACTCTTCCAGGATG+AGG 0.559187 8_1:+59018357 None:intergenic
TACAAGGCATATCTAGGTGT+TGG 0.563217 8_1:-59018522 Msa1203840:CDS
AGGAGGATGCATGGCCATTG+AGG 0.567803 8_1:-59019630 Msa1203840:intron
ATACCTCATCCTGGAAGAGT+TGG 0.569338 8_1:-59018360 Msa1203840:CDS
GTTTGTGTCCCAAGAATACT+CGG 0.569437 8_1:+59020039 None:intergenic
CATACTTGCCACAGATGAAG+AGG 0.571170 8_1:-59019762 Msa1203840:CDS
CAAACTGAAGAACATCATAT+GGG 0.572944 8_1:+59017208 None:intergenic
CTTCTTCGCGATGCTTGGAG+CGG 0.573401 8_1:+59017035 None:intergenic
GTATCTTCAGATGTTGGAGG+CGG 0.575088 8_1:-59020008 Msa1203840:CDS
ACTGATATGCGGAGTGAACA+TGG 0.575499 8_1:-59017389 Msa1203840:CDS
GCTACATACACTGCCTTCCA+TGG 0.575918 8_1:+59016826 None:intergenic
ACACGAGCAGGGTAATTTGG+AGG 0.579622 8_1:+59017234 None:intergenic
GCAGGAGTGCAGTGCAAGAG+GGG 0.580034 8_1:-59017592 Msa1203840:intron
CGGCTAATAACTCTTGTGAC+CGG 0.582389 8_1:+59021043 None:intergenic
ACTTAAACTATTCTTTGGGA+AGG 0.583340 8_1:-59020064 Msa1203840:CDS
TTGCAGGAGTGCAGTGCAAG+AGG 0.583757 8_1:-59017594 Msa1203840:intron
CAGGGTAATTTGGAGGAACC+CGG 0.584488 8_1:+59017241 None:intergenic
GTAATTGTAATTGAGCTACC+TGG 0.585247 8_1:+59017566 None:intergenic
GCTCGAATTTACTACAAGGA+TGG 0.587794 8_1:-59017425 Msa1203840:CDS
GTAACAGTAGAGCTCGAGAA+TGG 0.588608 8_1:-59020792 Msa1203840:CDS
TTAAGGTTGATTCAGCCCTA+AGG 0.588701 8_1:-59018991 Msa1203840:CDS
CTTAGGGTGCTTGTAGCAGG+TGG 0.590907 8_1:-59022292 Msa1203840:CDS
CTTCTCCAACTGCACGAGCA+AGG 0.592599 8_1:+59021002 None:intergenic
ATGCAGCCAAATATGGGCCA+AGG 0.593328 8_1:-59019650 Msa1203840:CDS
TGATACATTCACTCCTGCAG+TGG 0.593617 8_1:-59021077 Msa1203840:CDS
CCAACAGATTCAATGTCAGC+AGG 0.596818 8_1:+59020183 None:intergenic
AGTTGCAGTTATTCACGGGA+TGG 0.600750 8_1:-59018574 Msa1203840:CDS
TTCACTCCTGCAGTGGAACG+TGG 0.600761 8_1:-59021070 Msa1203840:CDS
GCGTTTCACAAAGAAGCTCC+CGG 0.600868 8_1:-59019969 Msa1203840:CDS
GTAACATAAGGTAGAAGCCA+TGG 0.601137 8_1:+59022534 None:intergenic
GGGAACAAAGTATTAAATCA+GGG 0.601894 8_1:-59019021 Msa1203840:CDS
GTGTCTTTATGTCTGATCAA+AGG 0.605084 8_1:+59022636 None:intergenic
TTCGGTTCATCAGCACCACC+GGG 0.607713 8_1:+59019951 None:intergenic
TATGGGCCAAGGAGGATGCA+TGG 0.608374 8_1:-59019639 Msa1203840:CDS
TATTGAAGGAAAGCGATACC+GGG 0.610556 8_1:-59017259 Msa1203840:CDS
CAGAATGGCCTCTTCATCTG+TGG 0.611295 8_1:+59019754 None:intergenic
AAAGATTTGAGTGCTGTGAG+AGG 0.616999 8_1:-59022202 Msa1203840:CDS
AAGATCCAGCTCAACATAGA+CGG 0.617857 8_1:+59018309 None:intergenic
CAAACGGACAACTACGCCAA+TGG 0.618460 8_1:-59018007 Msa1203840:CDS
AATTACAATTACTTCACCCA+AGG 0.618949 8_1:-59017555 Msa1203840:intron
AAAGGAGTTGGACAATGCAT+GGG 0.620153 8_1:-59019041 Msa1203840:CDS
TAGGCATACCCGATTATGCA+GGG 0.621885 8_1:+59017770 None:intergenic
TTTGAGTGCTGTGAGAGGAG+AGG 0.624147 8_1:-59022197 Msa1203840:CDS
ATGTTGAGCTGGATCTTGGG+TGG 0.625265 8_1:-59018303 Msa1203840:CDS
AGCAGATGGTATATGGTCGA+AGG 0.625848 8_1:-59020739 Msa1203840:intron
GGACAGTTATCAACTTGCAA+AGG 0.630008 8_1:-59019059 Msa1203840:CDS
GTAGATGTCTCGTCGCAGAA+TGG 0.634257 8_1:+59019739 None:intergenic
AGGTTGATTCAGCCCTAAGG+AGG 0.635267 8_1:-59018988 Msa1203840:intron
TTGGAGGCGGAAAGATGCAA+TGG 0.637314 8_1:-59019995 Msa1203840:CDS
CAGGAGTGCAGTGCAAGAGG+GGG 0.641480 8_1:-59017591 Msa1203840:CDS
ATCCTGGAAGAGTTGGAGGG+AGG 0.647436 8_1:-59018353 Msa1203840:CDS
CATATGGGTGGACACGAGCA+GGG 0.647782 8_1:+59017223 None:intergenic
AAGCCAGCCCAAATATCCAA+AGG 0.649772 8_1:+59016702 None:intergenic
CAGCCAAATATGGGCCAAGG+AGG 0.650204 8_1:-59019647 Msa1203840:CDS
TTAGCCGAATGACTTTGCAA+GGG 0.653020 8_1:-59021027 Msa1203840:CDS
GCAACACCTTCTTCAAAACA+AGG 0.656661 8_1:-59022328 Msa1203840:CDS
CTCATCCTGGAAGAGTTGGA+GGG 0.658752 8_1:-59018356 Msa1203840:CDS
ACTGAAGAACATCATATGGG+TGG 0.662504 8_1:+59017211 None:intergenic
GCATGCTCGAATTTACTACA+AGG 0.669580 8_1:-59017429 Msa1203840:CDS
CCTTCTTCGTAACTGATATG+CGG 0.673143 8_1:-59017400 Msa1203840:CDS
AGACCTGTTTCCTCTCCACA+TGG 0.688935 8_1:+59017830 None:intergenic
AGAATACCGACATTTAAATG+GGG 0.702793 8_1:-59019713 Msa1203840:CDS
TTTCACAAAGAAGCTCCCGG+TGG 0.766189 8_1:-59019966 Msa1203840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAATTTTGTACTAATTT+TGG - chr8_1:59017326-59017345 Msa1203840:intron 10.0%
!! ATTATTTATAGGTTTATTAA+AGG - chr8_1:59017494-59017513 Msa1203840:intron 10.0%
!! AAAAAAATAAAAATTATAGG+AGG - chr8_1:59017674-59017693 Msa1203840:intron 10.0%
!!! AAATTTTACAAATATATTAG+AGG - chr8_1:59020844-59020863 Msa1203840:intron 10.0%
!!! AATTTTACAAATATATTAGA+GGG - chr8_1:59020845-59020864 Msa1203840:intron 10.0%
!!! TTATTTTTTTTGTGTAAACA+GGG + chr8_1:59017664-59017683 None:intergenic 15.0%
!!! TTTATTTTTTTTGTGTAAAC+AGG + chr8_1:59017665-59017684 None:intergenic 15.0%
!! GATATATTAATGTAATGAAT+AGG + chr8_1:59018631-59018650 None:intergenic 15.0%
!! AACACAAGATAAAATAAAAT+TGG + chr8_1:59018938-59018957 None:intergenic 15.0%
!! AAAAGAATATAGTAACATTA+AGG + chr8_1:59019028-59019047 None:intergenic 15.0%
!! ACAATGATTGAAAAAATTAA+AGG + chr8_1:59019896-59019915 None:intergenic 15.0%
!!! TCATTTTTTCAAATTATTAC+CGG - chr8_1:59020520-59020539 Msa1203840:intron 15.0%
!! AATAATGATAGTTTAACTAT+TGG + chr8_1:59020615-59020634 None:intergenic 15.0%
!! AATAAATTTCTATTAGCATT+CGG + chr8_1:59021275-59021294 None:intergenic 15.0%
!! AATTTATTTATTTATTACGC+AGG - chr8_1:59021287-59021306 Msa1203840:intron 15.0%
!! TTTATTTGTGATTTACAAAA+TGG - chr8_1:59022533-59022552 Msa1203840:CDS 15.0%
!!! TCTTTAATATTTTTTTGATC+TGG + chr8_1:59022787-59022806 None:intergenic 15.0%
!! TTGGTTTATTTGATGTTATT+TGG - chr8_1:59017345-59017364 Msa1203840:intron 20.0%
!! TATTTGGTATTTCAGTTTAT+TGG - chr8_1:59017361-59017380 Msa1203840:intron 20.0%
!! TTAGAACAAATATTTAAGAG+TGG + chr8_1:59017705-59017724 None:intergenic 20.0%
!!! TACTATATTCTTTTGTGAAT+AGG - chr8_1:59019034-59019053 Msa1203840:CDS 20.0%
!! GAATTAAGAGATTAATATGA+TGG + chr8_1:59019463-59019482 None:intergenic 20.0%
!!! TTTTTCAATCATTGTTTTCT+TGG - chr8_1:59019901-59019920 Msa1203840:intron 20.0%
!!! AACTTTGTTTCTCTAAAAAA+AGG - chr8_1:59019943-59019962 Msa1203840:intron 20.0%
!!! ACTTTGTTTCTCTAAAAAAA+GGG - chr8_1:59019944-59019963 Msa1203840:intron 20.0%
!!! TATCATATTTGAAAAGCATA+AGG + chr8_1:59020362-59020381 None:intergenic 20.0%
!!! AACTATCATTATTTTCGAAT+AGG - chr8_1:59020622-59020641 Msa1203840:intron 20.0%
!!! CACAATTTTACATTTCATTA+TGG + chr8_1:59021067-59021086 None:intergenic 20.0%
!!! TGAACAATGATTTTACTTTT+TGG - chr8_1:59021597-59021616 Msa1203840:intron 20.0%
!! GATATTGAAAAAATTAAGCA+GGG + chr8_1:59021824-59021843 None:intergenic 20.0%
!! TGATATTGAAAAAATTAAGC+AGG + chr8_1:59021825-59021844 None:intergenic 20.0%
!!! TTCCATTTATTTTACTTACT+CGG + chr8_1:59021965-59021984 None:intergenic 20.0%
!!! AAGTCATATTTTACATGAAT+GGG + chr8_1:59022441-59022460 None:intergenic 20.0%
!!! TAAGTCATATTTTACATGAA+TGG + chr8_1:59022442-59022461 None:intergenic 20.0%
!!! ATAAACTTTCACATTTTGAA+TGG - chr8_1:59022463-59022482 Msa1203840:CDS 20.0%
! GAAGAGATAAAAGAGAAAAA+TGG + chr8_1:59016605-59016624 None:intergenic 25.0%
! ATTCAATGAGTTGTAACATA+AGG + chr8_1:59016798-59016817 None:intergenic 25.0%
!! AATGAAAAGTCTTTGTTTGT+GGG + chr8_1:59016860-59016879 None:intergenic 25.0%
! ATTACTGGTGATAGAATTAA+TGG - chr8_1:59017241-59017260 Msa1203840:CDS 25.0%
!!! GTTAGAGGAGTATTATTTAT+AGG - chr8_1:59017483-59017502 Msa1203840:intron 25.0%
! AACAAATATTTAAGAGTGGA+GGG + chr8_1:59017701-59017720 None:intergenic 25.0%
!! ATAGTTGATATTATCCACTT+TGG - chr8_1:59018010-59018029 Msa1203840:CDS 25.0%
! ACATGCTAAAATTGTAAACA+TGG + chr8_1:59018054-59018073 None:intergenic 25.0%
! GTGTTAATACAACTTTAACT+AGG + chr8_1:59018090-59018109 None:intergenic 25.0%
! AGGAAATTTCTGATAAAGAA+AGG + chr8_1:59018156-59018175 None:intergenic 25.0%
! GCAAATTAGATATCAATTCA+TGG + chr8_1:59018202-59018221 None:intergenic 25.0%
!!! TTGATATCTAATTTGCTATC+AGG - chr8_1:59018206-59018225 Msa1203840:intron 25.0%
!!! TGAAATCAAAAAGCATTATG+AGG + chr8_1:59018504-59018523 None:intergenic 25.0%
!!! TCATAATGCTTTTTGATTTC+AGG - chr8_1:59018503-59018522 Msa1203840:intron 25.0%
!! TTTTATGTCATTCTGTTTGT+AGG - chr8_1:59018710-59018729 Msa1203840:intron 25.0%
!! TAAACACTTGTGATAATGTT+CGG - chr8_1:59018804-59018823 Msa1203840:intron 25.0%
! ATTAATCTGTTTATCAAACC+AGG - chr8_1:59019001-59019020 Msa1203840:CDS 25.0%
! TAAATATACGCCAAAGAAAA+CGG + chr8_1:59019194-59019213 None:intergenic 25.0%
! AGCTTACTTAAACTATTCTT+TGG - chr8_1:59019248-59019267 Msa1203840:intron 25.0%
! GCTTACTTAAACTATTCTTT+GGG - chr8_1:59019249-59019268 Msa1203840:intron 25.0%
! AAGAGAAATATATACCTCAA+TGG + chr8_1:59019704-59019723 None:intergenic 25.0%
! ACAAACTTGATATGTACATT+AGG + chr8_1:59019818-59019837 None:intergenic 25.0%
!! CTTTGTTTCTCTAAAAAAAG+GGG - chr8_1:59019945-59019964 Msa1203840:intron 25.0%
!! TTTGTTTCTCTAAAAAAAGG+GGG - chr8_1:59019946-59019965 Msa1203840:intron 25.0%
! ATTAATTAAAGTGGCACTAA+TGG - chr8_1:59019984-59020003 Msa1203840:CDS 25.0%
! AAAGAAGCTTAAGTTAGAAA+GGG + chr8_1:59020223-59020242 None:intergenic 25.0%
! AAAAGAAGCTTAAGTTAGAA+AGG + chr8_1:59020224-59020243 None:intergenic 25.0%
!!! TTCTTTTTTTTCATCGTTAC+AGG - chr8_1:59020237-59020256 Msa1203840:intron 25.0%
! ATGATTAATGTGATCTATGA+AGG + chr8_1:59020591-59020610 None:intergenic 25.0%
!!! TATTTTCGAATAGGTTGATT+TGG - chr8_1:59020631-59020650 Msa1203840:intron 25.0%
! AAAAACTGAAGAGAAAGAAA+AGG + chr8_1:59020924-59020943 None:intergenic 25.0%
! TGATGATACTTGAACATATT+TGG + chr8_1:59021389-59021408 None:intergenic 25.0%
! GAAAGATGGACATAAAAATT+AGG + chr8_1:59021442-59021461 None:intergenic 25.0%
!! TCATTTTGTGTTAAACGTAT+CGG + chr8_1:59021520-59021539 None:intergenic 25.0%
! ATCATTGTTCATGTTTCAAA+AGG + chr8_1:59021588-59021607 None:intergenic 25.0%
! TGATATATTTGTGTAATTGC+AGG - chr8_1:59021707-59021726 Msa1203840:intron 25.0%
! ATCACAATCTGAATTAAACT+CGG - chr8_1:59021796-59021815 Msa1203840:intron 25.0%
!!! TCAACAATCTCTCTTTTTTA+AGG - chr8_1:59021855-59021874 Msa1203840:intron 25.0%
! GAGTAAGTAAAATAAATGGA+AGG - chr8_1:59021964-59021983 Msa1203840:intron 25.0%
!! CATTATATTTGCAGTATTGA+AGG - chr8_1:59022044-59022063 Msa1203840:intron 25.0%
! AGACATAGTGGTAATTTATA+TGG - chr8_1:59022195-59022214 Msa1203840:CDS 25.0%
!! TGCAGGATATTTTACAATAT+TGG - chr8_1:59022390-59022409 Msa1203840:CDS 25.0%
!! GCAGGATATTTTACAATATT+GGG - chr8_1:59022391-59022410 Msa1203840:CDS 25.0%
! TTAGCACCATTATTAATGAA+TGG - chr8_1:59022636-59022655 Msa1203840:five_prime_UTR 25.0%
! CTAGAACCATTCATTAATAA+TGG + chr8_1:59022645-59022664 None:intergenic 25.0%
! CATGATATTTACTTGAGTAA+GGG - chr8_1:59022717-59022736 Msa1203840:five_prime_UTR 25.0%
! ATGATATTTACTTGAGTAAG+GGG - chr8_1:59022718-59022737 Msa1203840:five_prime_UTR 25.0%
AGGGCAACTATTATTATTAG+AGG + chr8_1:59016524-59016543 None:intergenic 30.0%
TTTGTGTTTGTGTTTGTTCT+TGG - chr8_1:59016731-59016750 Msa1203840:three_prime_UTR 30.0%
!! GTGTTTGTTCTTGGTTTTTA+AGG - chr8_1:59016740-59016759 Msa1203840:three_prime_UTR 30.0%
! CAATGAAAAGTCTTTGTTTG+TGG + chr8_1:59016861-59016880 None:intergenic 30.0%
! CACAAACAAAGACTTTTCAT+TGG - chr8_1:59016859-59016878 Msa1203840:three_prime_UTR 30.0%
! ACTTCATCTTTTCATAGCTA+TGG - chr8_1:59016887-59016906 Msa1203840:three_prime_UTR 30.0%
AAAACAGAGCAAAAAAACAG+AGG - chr8_1:59016912-59016931 Msa1203840:three_prime_UTR 30.0%
!! AGAATTAATGGTCTTGTTGA+TGG - chr8_1:59017253-59017272 Msa1203840:CDS 30.0%
CTTCTAAATGTTTACACTTG+AGG + chr8_1:59017400-59017419 None:intergenic 30.0%
AAGTATCTAAGTCTTTGAGT+TGG - chr8_1:59017447-59017466 Msa1203840:intron 30.0%
GAACAAATATTTAAGAGTGG+AGG + chr8_1:59017702-59017721 None:intergenic 30.0%
AGTTGAAACTAAGTTCTCAA+TGG + chr8_1:59017736-59017755 None:intergenic 30.0%
GTGGATAATATCAACTATGA+AGG + chr8_1:59018008-59018027 None:intergenic 30.0%
TTGATATTATCCACTTTGGT+CGG - chr8_1:59018014-59018033 Msa1203840:intron 30.0%
TAACCAATCCGATTAGAAAA+GGG + chr8_1:59018114-59018133 None:intergenic 30.0%
ATAACCAATCCGATTAGAAA+AGG + chr8_1:59018115-59018134 None:intergenic 30.0%
CAAATACTAACATCGAGTAA+AGG + chr8_1:59018176-59018195 None:intergenic 30.0%
CTTTACTCGATGTTAGTATT+TGG - chr8_1:59018174-59018193 Msa1203840:CDS 30.0%
TGCAAAATTAACGACATTAC+TGG + chr8_1:59018356-59018375 None:intergenic 30.0%
CATTCTTCTTGAATATGCAT+TGG - chr8_1:59018432-59018451 Msa1203840:intron 30.0%
GAGAATGGTCAAAAATATGA+AGG - chr8_1:59018540-59018559 Msa1203840:CDS 30.0%
AAAATATGAAGGAGACCTAT+TGG - chr8_1:59018551-59018570 Msa1203840:CDS 30.0%
TATCGCAAAATACGTTACAA+TGG - chr8_1:59018647-59018666 Msa1203840:intron 30.0%
TGATCATAAATTCTGCACTT+AGG - chr8_1:59018742-59018761 Msa1203840:intron 30.0%
GATCATAAATTCTGCACTTA+GGG - chr8_1:59018743-59018762 Msa1203840:intron 30.0%
! AAACACTTGTGATAATGTTC+GGG - chr8_1:59018805-59018824 Msa1203840:intron 30.0%
!! CTTATTTTCATAAGCTCTCA+GGG - chr8_1:59018874-59018893 Msa1203840:intron 30.0%
! AAGCTAGAATTCGTTTTCAT+AGG + chr8_1:59018904-59018923 None:intergenic 30.0%
ATATAGTAACATTAAGGTCC+TGG + chr8_1:59019022-59019041 None:intergenic 30.0%
! TATTCTTTTGTGAATAGGTC+AGG - chr8_1:59019039-59019058 Msa1203840:CDS 30.0%
CCAAAGAAAACGGATAAATA+CGG + chr8_1:59019184-59019203 None:intergenic 30.0%
! ACTTAAACTATTCTTTGGGA+AGG - chr8_1:59019253-59019272 Msa1203840:intron 30.0%
TACTTTGTATCTTCAGATGT+TGG - chr8_1:59019303-59019322 Msa1203840:intron 30.0%
CACTAAAACTGCATACTATT+CGG + chr8_1:59019387-59019406 None:intergenic 30.0%
TGTATGCATTGCAGAAAAAA+AGG - chr8_1:59019483-59019502 Msa1203840:intron 30.0%
AAGGTTGCTCAAGATATTTA+AGG - chr8_1:59019507-59019526 Msa1203840:intron 30.0%
AGGTTGCTCAAGATATTTAA+GGG - chr8_1:59019508-59019527 Msa1203840:intron 30.0%
ACAGAATACCGACATTTAAA+TGG - chr8_1:59019602-59019621 Msa1203840:intron 30.0%
CAGAATACCGACATTTAAAT+GGG - chr8_1:59019603-59019622 Msa1203840:intron 30.0%
AGAATACCGACATTTAAATG+GGG - chr8_1:59019604-59019623 Msa1203840:intron 30.0%
ACATTAGGTCTGAAAAATGT+AGG + chr8_1:59019803-59019822 None:intergenic 30.0%
! TTTTCTGCATTAAGAGAAGA+TGG - chr8_1:59020142-59020161 Msa1203840:intron 30.0%
! TGGGAACAAAGTATTAAATC+AGG - chr8_1:59020295-59020314 Msa1203840:intron 30.0%
! GGGAACAAAGTATTAAATCA+GGG - chr8_1:59020296-59020315 Msa1203840:intron 30.0%
TTTCAAATTATTACCGGTGT+CGG - chr8_1:59020526-59020545 Msa1203840:intron 30.0%
ATTTGGTATTCTCTTTGATG+AGG - chr8_1:59020648-59020667 Msa1203840:intron 30.0%
! TTTTCTTTCACTTTCATAGC+TGG + chr8_1:59020718-59020737 None:intergenic 30.0%
GAAAGAAAAGGTGGATATTT+CGG + chr8_1:59020912-59020931 None:intergenic 30.0%
TGCTGAGAAGAAATTATATC+TGG - chr8_1:59021216-59021235 Msa1203840:intron 30.0%
TTATTTATTACGCAGGCAAA+CGG - chr8_1:59021294-59021313 Msa1203840:intron 30.0%
TCCATCTTTCGTTGAATTAT+AGG - chr8_1:59021452-59021471 Msa1203840:intron 30.0%
ACCTATAATTCAACGAAAGA+TGG + chr8_1:59021456-59021475 None:intergenic 30.0%
ATCTTTCGTTGAATTATAGG+TGG - chr8_1:59021455-59021474 Msa1203840:intron 30.0%
AATTACAATTACTTCACCCA+AGG - chr8_1:59021762-59021781 Msa1203840:intron 30.0%
GTGATAAATTGTTCTACCTT+GGG + chr8_1:59021781-59021800 None:intergenic 30.0%
TGTGATAAATTGTTCTACCT+TGG + chr8_1:59021782-59021801 None:intergenic 30.0%
CAAACTGAAGAACATCATAT+GGG + chr8_1:59022112-59022131 None:intergenic 30.0%
! ACTTTTCACATTAGACATAG+TGG - chr8_1:59022183-59022202 Msa1203840:CDS 30.0%
AATGAAACCTGCAAATAACT+CGG + chr8_1:59022242-59022261 None:intergenic 30.0%
TTTCTCATCCTTTGGATATT+TGG - chr8_1:59022607-59022626 Msa1203840:five_prime_UTR 30.0%
TTCTCATCCTTTGGATATTT+GGG - chr8_1:59022608-59022627 Msa1203840:five_prime_UTR 30.0%
ATGACCATTTGATAGATCTT+AGG - chr8_1:59022693-59022712 Msa1203840:five_prime_UTR 30.0%
CCTTACTCAAGTAAATATCA+TGG + chr8_1:59022719-59022738 None:intergenic 30.0%
CCATGATATTTACTTGAGTA+AGG - chr8_1:59022716-59022735 Msa1203840:five_prime_UTR 30.0%
GTGTCTTTATGTCTGATCAA+AGG + chr8_1:59016684-59016703 None:intergenic 35.0%
!!! GTGTTTTTTCAACTCAACCA+TGG - chr8_1:59016766-59016785 Msa1203840:three_prime_UTR 35.0%
GTTTGTGGGAATTGAGAAAA+GGG + chr8_1:59016846-59016865 None:intergenic 35.0%
TGTTTGTGGGAATTGAGAAA+AGG + chr8_1:59016847-59016866 None:intergenic 35.0%
!!! TTCTCACCTTGTTTTGAAGA+AGG + chr8_1:59016998-59017017 None:intergenic 35.0%
AAGGTGAGAAGAAGAATCTT+AGG - chr8_1:59017008-59017027 Msa1203840:CDS 35.0%
AGGTGAGAAGAAGAATCTTA+GGG - chr8_1:59017009-59017028 Msa1203840:CDS 35.0%
! GAGAAAAGGATTTGAAGTGA+TGG - chr8_1:59017084-59017103 Msa1203840:intron 35.0%
GCATTACTCTGTATCTGAAT+AGG + chr8_1:59017160-59017179 None:intergenic 35.0%
TCAGATACAGAGTAATGCTT+TGG - chr8_1:59017162-59017181 Msa1203840:intron 35.0%
! ATGAGAGTTGGTTGTATTAC+TGG - chr8_1:59017226-59017245 Msa1203840:CDS 35.0%
!! TATCTAAGTCTTTGAGTTGG+AGG - chr8_1:59017450-59017469 Msa1203840:intron 35.0%
GCAGCAATGTTAAAACTCTT+AGG - chr8_1:59017566-59017585 Msa1203840:CDS 35.0%
CAACTAGTGTTGTCAAATAG+TGG - chr8_1:59017751-59017770 Msa1203840:intron 35.0%
TGTTGTCAAATAGTGGCTAT+TGG - chr8_1:59017758-59017777 Msa1203840:intron 35.0%
ATATTCATCACAGCTAACGT+TGG - chr8_1:59017945-59017964 Msa1203840:intron 35.0%
TATTCATCACAGCTAACGTT+GGG - chr8_1:59017946-59017965 Msa1203840:intron 35.0%
!!! GACAGTTGGTTTTGATTAAC+CGG - chr8_1:59017968-59017987 Msa1203840:CDS 35.0%
!! TTTTGATTAACCGGATGACA+TGG - chr8_1:59017977-59017996 Msa1203840:CDS 35.0%
! TTAACACCCCCTTTTCTAAT+CGG - chr8_1:59018103-59018122 Msa1203840:intron 35.0%
AACCAATCCGATTAGAAAAG+GGG + chr8_1:59018113-59018132 None:intergenic 35.0%
!! AAAAAGCATTATGAGGAGAG+TGG + chr8_1:59018497-59018516 None:intergenic 35.0%
ATAAATTCTGCACTTAGGGT+TGG - chr8_1:59018747-59018766 Msa1203840:intron 35.0%
! GGTTTGGATTGACTTATTTG+AGG - chr8_1:59018768-59018787 Msa1203840:intron 35.0%
!! GCTTATTTTCATAAGCTCTC+AGG - chr8_1:59018873-59018892 Msa1203840:intron 35.0%
GACACAGTTATTTGGACAAA+CGG - chr8_1:59019061-59019080 Msa1203840:CDS 35.0%
! CCGTATTTATCCGTTTTCTT+TGG - chr8_1:59019181-59019200 Msa1203840:intron 35.0%
TTTGTATCTTCAGATGTTGG+AGG - chr8_1:59019306-59019325 Msa1203840:intron 35.0%
! TCATTTCATCCTTTGCTATG+TGG - chr8_1:59019425-59019444 Msa1203840:intron 35.0%
! CATTTCATCCTTTGCTATGT+GGG - chr8_1:59019426-59019445 Msa1203840:intron 35.0%
! AACTTTTACCCACATAGCAA+AGG + chr8_1:59019437-59019456 None:intergenic 35.0%
GCATTGCAGAAAAAAAGGAA+AGG - chr8_1:59019488-59019507 Msa1203840:intron 35.0%
ATAGTGAAGTCTGTAGAATC+TGG + chr8_1:59019842-59019861 None:intergenic 35.0%
TCTACAGACTTCACTATTTC+AGG - chr8_1:59019845-59019864 Msa1203840:intron 35.0%
CTACAGACTTCACTATTTCA+GGG - chr8_1:59019846-59019865 Msa1203840:intron 35.0%
! CAATCATTGTTTTCTTGGCT+AGG - chr8_1:59019906-59019925 Msa1203840:intron 35.0%
! TTCTCTAAAAAAAGGGGGAA+TGG - chr8_1:59019951-59019970 Msa1203840:CDS 35.0%
! TCTCTAAAAAAAGGGGGAAT+GGG - chr8_1:59019952-59019971 Msa1203840:CDS 35.0%
GGAGGAAATTCAAATACTCT+CGG + chr8_1:59020027-59020046 None:intergenic 35.0%
TTATCAACTTGCAAAGGAGT+TGG - chr8_1:59020264-59020283 Msa1203840:intron 35.0%
TAAATCAGGGAACCCAATTA+AGG - chr8_1:59020309-59020328 Msa1203840:intron 35.0%
TAAGGTATGTTACCTCCTTA+GGG + chr8_1:59020344-59020363 None:intergenic 35.0%
ATAAGGTATGTTACCTCCTT+AGG + chr8_1:59020345-59020364 None:intergenic 35.0%
! TTGACTTGATTTGAACTGAG+TGG - chr8_1:59020403-59020422 Msa1203840:intron 35.0%
CTTTCACAACCTATGAATCA+AGG - chr8_1:59020428-59020447 Msa1203840:intron 35.0%
TGGAAAAGGGAATAAAAGAG+AGG + chr8_1:59020686-59020705 None:intergenic 35.0%
! ATTTAAGTTCCTACCTCCAA+AGG + chr8_1:59020828-59020847 None:intergenic 35.0%
AACTGAAGAGAAAGAAAAGG+TGG + chr8_1:59020921-59020940 None:intergenic 35.0%
! TTTTGCAGTGACAAACTTGA+AGG - chr8_1:59021123-59021142 Msa1203840:intron 35.0%
CATCATCATCTTCAAACCAT+TGG + chr8_1:59021329-59021348 None:intergenic 35.0%
! AGGTGGTTTTTATTACCATG+TGG - chr8_1:59021472-59021491 Msa1203840:intron 35.0%
! GTTTTTATTACCATGTGGAG+AGG - chr8_1:59021477-59021496 Msa1203840:intron 35.0%
GTAATTGTAATTGAGCTACC+TGG + chr8_1:59021754-59021773 None:intergenic 35.0%
CGCCGAGTAAGTAAAATAAA+TGG - chr8_1:59021960-59021979 Msa1203840:intron 35.0%
CCAAACTGAAGAACATCATA+TGG + chr8_1:59022113-59022132 None:intergenic 35.0%
CCATATGATGTTCTTCAGTT+TGG - chr8_1:59022110-59022129 Msa1203840:CDS 35.0%
TCAACTTCTTTCTCATCCTT+TGG - chr8_1:59022599-59022618 Msa1203840:five_prime_UTR 35.0%
ATGGCCTAAGATCTATCAAA+TGG + chr8_1:59022700-59022719 None:intergenic 35.0%
GTAACATAAGGTAGAAGCCA+TGG + chr8_1:59016786-59016805 None:intergenic 40.0%
CTTGAGAATGATGCTGTAGA+TGG + chr8_1:59016821-59016840 None:intergenic 40.0%
GCAACACCTTCTTCAAAACA+AGG - chr8_1:59016989-59017008 Msa1203840:exon 40.0%
!!! TGGTGGATTGGTTTTTGCTT+TGG - chr8_1:59017054-59017073 Msa1203840:CDS 40.0%
! AAAGATTTGAGTGCTGTGAG+AGG - chr8_1:59017115-59017134 Msa1203840:intron 40.0%
GCTGATGAAGTTATGAGAGT+TGG - chr8_1:59017214-59017233 Msa1203840:CDS 40.0%
!! TTGATGGAGTTTCTGGTTCT+TGG - chr8_1:59017269-59017288 Msa1203840:intron 40.0%
!! GGAGGAGCATTTAAAGTTAG+AGG - chr8_1:59017468-59017487 Msa1203840:intron 40.0%
TTAACATTGCTGCATGCTCA+AGG + chr8_1:59017559-59017578 None:intergenic 40.0%
ACCAATCCGATTAGAAAAGG+GGG + chr8_1:59018112-59018131 None:intergenic 40.0%
ATTAGCCGAATGACTTTGCA+AGG - chr8_1:59018289-59018308 Msa1203840:intron 40.0%
TTAGCCGAATGACTTTGCAA+GGG - chr8_1:59018290-59018309 Msa1203840:intron 40.0%
! GTCGTTAATTTTGCAGACGA+TGG - chr8_1:59018361-59018380 Msa1203840:CDS 40.0%
TATGCATTGGAAGACTAACG+AGG - chr8_1:59018445-59018464 Msa1203840:intron 40.0%
CTAACGAGGTTTAGCATCAT+CGG - chr8_1:59018459-59018478 Msa1203840:intron 40.0%
TAACGAGGTTTAGCATCATC+GGG - chr8_1:59018460-59018479 Msa1203840:intron 40.0%
TATGAAGGAGACCTATTGGT+TGG - chr8_1:59018555-59018574 Msa1203840:CDS 40.0%
TAGGTCAGGACACAGTTATT+TGG - chr8_1:59019053-59019072 Msa1203840:CDS 40.0%
ACCGGTATAACAAGTATAGC+CGG + chr8_1:59019099-59019118 None:intergenic 40.0%
AGGCACAAAATCTGCAATAC+CGG + chr8_1:59019117-59019136 None:intergenic 40.0%
CTGCTGACATTGAATCTGTT+GGG - chr8_1:59019135-59019154 Msa1203840:intron 40.0%
GTTTGTGTCCCAAGAATACT+CGG + chr8_1:59019281-59019300 None:intergenic 40.0%
TGCTCAAGATATTTAAGGGC+TGG - chr8_1:59019512-59019531 Msa1203840:intron 40.0%
ACCGACATTTAAATGGGGAA+AGG - chr8_1:59019609-59019628 Msa1203840:intron 40.0%
CCCTTTCCCCATTTAAATGT+CGG + chr8_1:59019613-59019632 None:intergenic 40.0%
CCGACATTTAAATGGGGAAA+GGG - chr8_1:59019610-59019629 Msa1203840:intron 40.0%
TATTTGAATTTCCTCCCTCG+AGG - chr8_1:59020031-59020050 Msa1203840:CDS 40.0%
!!! TTTTGACTTTGCAACCTCGA+GGG + chr8_1:59020048-59020067 None:intergenic 40.0%
!!! ATTTTGACTTTGCAACCTCG+AGG + chr8_1:59020049-59020068 None:intergenic 40.0%
ACCAATGAGCTTACACCTAA+CGG - chr8_1:59020072-59020091 Msa1203840:CDS 40.0%
GGACAGTTATCAACTTGCAA+AGG - chr8_1:59020258-59020277 Msa1203840:intron 40.0%
AAAGGAGTTGGACAATGCAT+GGG - chr8_1:59020276-59020295 Msa1203840:intron 40.0%
GGGCTGAATCAACCTTAATT+GGG + chr8_1:59020324-59020343 None:intergenic 40.0%
AGGGCTGAATCAACCTTAAT+TGG + chr8_1:59020325-59020344 None:intergenic 40.0%
! TTAAGGTTGATTCAGCCCTA+AGG - chr8_1:59020326-59020345 Msa1203840:intron 40.0%
! GTGAAGTGTCCTTGATTCAT+AGG + chr8_1:59020440-59020459 None:intergenic 40.0%
CTTCACATTGAAGATGTGTC+TGG - chr8_1:59020454-59020473 Msa1203840:intron 40.0%
ATTGACAGAGACGTGAACAA+TGG + chr8_1:59020568-59020587 None:intergenic 40.0%
CTCTTTGATGAGGTGACTAA+TGG - chr8_1:59020658-59020677 Msa1203840:intron 40.0%
!! CTGGAAGCATTCATGGAAAA+GGG + chr8_1:59020699-59020718 None:intergenic 40.0%
!! TTCATAGCTGGAAGCATTCA+TGG + chr8_1:59020706-59020725 None:intergenic 40.0%
TCCACTTACAAGGCATATCT+AGG - chr8_1:59020789-59020808 Msa1203840:CDS 40.0%
ACCTAGATATGCCTTGTAAG+TGG + chr8_1:59020793-59020812 None:intergenic 40.0%
TACAAGGCATATCTAGGTGT+TGG - chr8_1:59020795-59020814 Msa1203840:CDS 40.0%
AAGATCCAGCTCAACATAGA+CGG + chr8_1:59021011-59021030 None:intergenic 40.0%
TCTATGTTGAGCTGGATCTT+GGG - chr8_1:59021011-59021030 Msa1203840:CDS 40.0%
ATCTTGGGTGGAAATAGGTA+AGG - chr8_1:59021026-59021045 Msa1203840:CDS 40.0%
AAGGTAGACCAATAAGTTGC+AGG - chr8_1:59021142-59021161 Msa1203840:intron 40.0%
GAGATGAAACCCTGCATAAT+CGG - chr8_1:59021538-59021557 Msa1203840:intron 40.0%
AGATGAAACCCTGCATAATC+GGG - chr8_1:59021539-59021558 Msa1203840:intron 40.0%
AAGGCACAACTGTAATCAGT+AGG + chr8_1:59021569-59021588 None:intergenic 40.0%
AGGGAACAATGCACACTAAA+TGG + chr8_1:59021626-59021645 None:intergenic 40.0%
TGCATTGTTCCCTTCTCAAT+TGG - chr8_1:59021633-59021652 Msa1203840:intron 40.0%
TAGTAAATTCGAGCATGCGT+TGG + chr8_1:59021886-59021905 None:intergenic 40.0%
GCATGCTCGAATTTACTACA+AGG - chr8_1:59021888-59021907 Msa1203840:intron 40.0%
GCTCGAATTTACTACAAGGA+TGG - chr8_1:59021892-59021911 Msa1203840:intron 40.0%
CCTTCTTCGTAACTGATATG+CGG - chr8_1:59021917-59021936 Msa1203840:intron 40.0%
GTATTGAAGGAAAGCGATAC+CGG - chr8_1:59022057-59022076 Msa1203840:CDS 40.0%
TATTGAAGGAAAGCGATACC+GGG - chr8_1:59022058-59022077 Msa1203840:CDS 40.0%
ACTGAAGAACATCATATGGG+TGG + chr8_1:59022109-59022128 None:intergenic 40.0%
!! TCTTCAGTTTGGTTCTGAGA+AGG - chr8_1:59022121-59022140 Msa1203840:CDS 40.0%
!! GCAGGTTTCATTTCGAGTTA+AGG - chr8_1:59022250-59022269 Msa1203840:CDS 40.0%
GTTACACAGCACAAATTTGC+AGG - chr8_1:59022373-59022392 Msa1203840:CDS 40.0%
! CATTTTGAATGGAGTGACCA+TGG - chr8_1:59022474-59022493 Msa1203840:CDS 40.0%
! AATCTTAGGGTGCTTGTAGC+AGG - chr8_1:59017022-59017041 Msa1203840:CDS 45.0%
GCTTTGGCTGCAAAGAGAAA+AGG - chr8_1:59017070-59017089 Msa1203840:intron 45.0%
GAGTAATGCTTTGGCTGCTT+TGG - chr8_1:59017171-59017190 Msa1203840:intron 45.0%
!! GGTCTTGTTGATGGAGTTTC+TGG - chr8_1:59017262-59017281 Msa1203840:CDS 45.0%
AAGGACCTTGGCTAAGCTAA+GGG + chr8_1:59017524-59017543 None:intergenic 45.0%
! ACTAATCTCTCGAGCCTTGT+GGG + chr8_1:59017615-59017634 None:intergenic 45.0%
TCGCAGATCACGGAAAATAG+CGG + chr8_1:59017897-59017916 None:intergenic 45.0%
GTGTTGTCAATCGCAGATCA+CGG + chr8_1:59017907-59017926 None:intergenic 45.0%
TGATCTGCGATTGACAACAC+TGG - chr8_1:59017907-59017926 Msa1203840:intron 45.0%
TATTATCCACTTTGGTCGGC+TGG - chr8_1:59018018-59018037 Msa1203840:intron 45.0%
! ACCCCCTTTTCTAATCGGAT+TGG - chr8_1:59018108-59018127 Msa1203840:intron 45.0%
TGATACATTCACTCCTGCAG+TGG - chr8_1:59018240-59018259 Msa1203840:intron 45.0%
CGGCTAATAACTCTTGTGAC+CGG + chr8_1:59018277-59018296 None:intergenic 45.0%
GGATCCCTTGCAAAGTCATT+CGG + chr8_1:59018297-59018316 None:intergenic 45.0%
! TTTTGCAGACGATGGAAGCA+AGG - chr8_1:59018369-59018388 Msa1203840:CDS 45.0%
GCAAGGTAGGTAGAGAAGAA+TGG - chr8_1:59018386-59018405 Msa1203840:intron 45.0%
GTAACAGTAGAGCTCGAGAA+TGG - chr8_1:59018525-59018544 Msa1203840:CDS 45.0%
TACCATCTGCTCCAACCAAT+AGG + chr8_1:59018569-59018588 None:intergenic 45.0%
TGGTTGGAGCAGATGGTATA+TGG - chr8_1:59018571-59018590 Msa1203840:CDS 45.0%
AGCAGATGGTATATGGTCGA+AGG - chr8_1:59018578-59018597 Msa1203840:CDS 45.0%
!! TTCTGCACTTAGGGTTGGTT+TGG - chr8_1:59018752-59018771 Msa1203840:intron 45.0%
!! GCCGGCTATACTTGTTATAC+CGG - chr8_1:59019095-59019114 Msa1203840:intron 45.0%
CCAACAGATTCAATGTCAGC+AGG + chr8_1:59019137-59019156 None:intergenic 45.0%
CCTGCTGACATTGAATCTGT+TGG - chr8_1:59019134-59019153 Msa1203840:intron 45.0%
!! GGAAGGTACCGAGTATTCTT+GGG - chr8_1:59019270-59019289 Msa1203840:intron 45.0%
GTATCTTCAGATGTTGGAGG+CGG - chr8_1:59019309-59019328 Msa1203840:intron 45.0%
CATACTTGCCACAGATGAAG+AGG - chr8_1:59019555-59019574 Msa1203840:intron 45.0%
!! AAGGGTCGTGTTACTTTGCT+TGG - chr8_1:59019628-59019647 Msa1203840:intron 45.0%
CATGCCATGCAGCCAAATAT+GGG - chr8_1:59019661-59019680 Msa1203840:CDS 45.0%
TCCGTTAGGTGTAAGCTCAT+TGG + chr8_1:59020076-59020095 None:intergenic 45.0%
TGAGCTTACACCTAACGGAA+TGG - chr8_1:59020077-59020096 Msa1203840:intron 45.0%
TCTGAATCCACCATTCCGTT+AGG + chr8_1:59020090-59020109 None:intergenic 45.0%
CAAAGGAGTTGGACAATGCA+TGG - chr8_1:59020275-59020294 Msa1203840:intron 45.0%
AGAGACGTGAACAATGGACA+AGG + chr8_1:59020562-59020581 None:intergenic 45.0%
!! GCTGGAAGCATTCATGGAAA+AGG + chr8_1:59020700-59020719 None:intergenic 45.0%
CTGCGAGTTGCAGTTATTCA+CGG - chr8_1:59020738-59020757 Msa1203840:intron 45.0%
TGCGAGTTGCAGTTATTCAC+GGG - chr8_1:59020739-59020758 Msa1203840:intron 45.0%
AGTTGCAGTTATTCACGGGA+TGG - chr8_1:59020743-59020762 Msa1203840:CDS 45.0%
TATTCACGGGATGGCTAGAA+TGG - chr8_1:59020752-59020771 Msa1203840:CDS 45.0%
TCTGATGGCTTCCACTTACA+AGG - chr8_1:59020779-59020798 Msa1203840:CDS 45.0%
!! GCATATCTAGGTGTTGGTCT+TGG - chr8_1:59020801-59020820 Msa1203840:intron 45.0%
AGGATGAGGTATGCGAAAGT+TGG + chr8_1:59020949-59020968 None:intergenic 45.0%
AACTTTCGCATACCTCATCC+TGG - chr8_1:59020948-59020967 Msa1203840:intron 45.0%
ATACCTCATCCTGGAAGAGT+TGG - chr8_1:59020957-59020976 Msa1203840:CDS 45.0%
GTCTATGTTGAGCTGGATCT+TGG - chr8_1:59021010-59021029 Msa1203840:CDS 45.0%
ACCAATAAGTTGCAGGCTCT+CGG - chr8_1:59021149-59021168 Msa1203840:intron 45.0%
! GCACTTGAGCGTGCTATTAA+CGG - chr8_1:59021348-59021367 Msa1203840:intron 45.0%
TTACCATGTGGAGAGGAAAC+AGG - chr8_1:59021484-59021503 Msa1203840:intron 45.0%
TAGGCATACCCGATTATGCA+GGG + chr8_1:59021550-59021569 None:intergenic 45.0%
CCGCATATCAGTTACGAAGA+AGG + chr8_1:59021920-59021939 None:intergenic 45.0%
ACTGATATGCGGAGTGAACA+TGG - chr8_1:59021928-59021947 Msa1203840:intron 45.0%
GTAGCATCCGAGTTATTTGC+AGG - chr8_1:59022232-59022251 Msa1203840:CDS 45.0%
!! ACATGAATGGGAGTGCTTGT+AGG + chr8_1:59022429-59022448 None:intergenic 45.0%
TTGAATGGAGTGACCATGGA+AGG - chr8_1:59022478-59022497 Msa1203840:CDS 45.0%
CATCCTTTGGATATTTGGGC+TGG - chr8_1:59022612-59022631 Msa1203840:five_prime_UTR 45.0%
AAGCCAGCCCAAATATCCAA+AGG + chr8_1:59022618-59022637 None:intergenic 45.0%
!! TTATTGTAAAATAAATTAAA+GGG + chr8_1:59016543-59016562 None:intergenic 5.0%
!! ATTATTGTAAAATAAATTAA+AGG + chr8_1:59016544-59016563 None:intergenic 5.0%
!! ACAAAAAAAATAAAAATTAT+AGG - chr8_1:59017671-59017690 Msa1203840:intron 5.0%
!! AATATTATTATTAATTAAAG+TGG - chr8_1:59019975-59019994 Msa1203840:CDS 5.0%
!! CTTGTAGCAGGTGGTGGAAT+TGG - chr8_1:59017034-59017053 Msa1203840:CDS 50.0%
!! AGGTGGTGGAATTGGTGGAT+TGG - chr8_1:59017042-59017061 Msa1203840:CDS 50.0%
! TTTGAGTGCTGTGAGAGGAG+AGG - chr8_1:59017120-59017139 Msa1203840:intron 50.0%
! TTGAGTGCTGTGAGAGGAGA+GGG - chr8_1:59017121-59017140 Msa1203840:intron 50.0%
AGAGGAGAGGGACAGTATAG+AGG - chr8_1:59017133-59017152 Msa1203840:intron 50.0%
CAAGGACCTTGGCTAAGCTA+AGG + chr8_1:59017525-59017544 None:intergenic 50.0%
CTTAGCTTAGCCAAGGTCCT+TGG - chr8_1:59017523-59017542 Msa1203840:intron 50.0%
TTGGATCGAACCAAGGACCT+TGG + chr8_1:59017536-59017555 None:intergenic 50.0%
CTCAAGGTTGGATCGAACCA+AGG + chr8_1:59017543-59017562 None:intergenic 50.0%
CATTGCTGCATGCTCAAGGT+TGG + chr8_1:59017555-59017574 None:intergenic 50.0%
GCAGAGTTTGCCGCCTATTT+GGG - chr8_1:59017588-59017607 Msa1203840:CDS 50.0%
GACTAATCTCTCGAGCCTTG+TGG + chr8_1:59017616-59017635 None:intergenic 50.0%
ACAGCTAACGTTGGGACAGT+TGG - chr8_1:59017954-59017973 Msa1203840:intron 50.0%
GAAGGCGAAACCATGTCATC+CGG + chr8_1:59017990-59018009 None:intergenic 50.0%
! GACCTATTGGTTGGAGCAGA+TGG - chr8_1:59018564-59018583 Msa1203840:CDS 50.0%
CAAACGGAAGCTGTTTACGC+CGG - chr8_1:59019077-59019096 Msa1203840:intron 50.0%
!! GGGAAGGTACCGAGTATTCT+TGG - chr8_1:59019269-59019288 Msa1203840:intron 50.0%
TTGGAGGCGGAAAGATGCAA+TGG - chr8_1:59019322-59019341 Msa1203840:intron 50.0%
GCGTTTCACAAAGAAGCTCC+CGG - chr8_1:59019348-59019367 Msa1203840:intron 50.0%
TTTCACAAAGAAGCTCCCGG+TGG - chr8_1:59019351-59019370 Msa1203840:intron 50.0%
ATTCGGTTCATCAGCACCAC+CGG + chr8_1:59019370-59019389 None:intergenic 50.0%
CAGAATGGCCTCTTCATCTG+TGG + chr8_1:59019566-59019585 None:intergenic 50.0%
GTAGATGTCTCGTCGCAGAA+TGG + chr8_1:59019581-59019600 None:intergenic 50.0%
CCATATTTGGCTGCATGGCA+TGG + chr8_1:59019663-59019682 None:intergenic 50.0%
CCATGCCATGCAGCCAAATA+TGG - chr8_1:59019660-59019679 Msa1203840:CDS 50.0%
TTGGCCCATATTTGGCTGCA+TGG + chr8_1:59019668-59019687 None:intergenic 50.0%
ATGCAGCCAAATATGGGCCA+AGG - chr8_1:59019667-59019686 Msa1203840:CDS 50.0%
CATCCTCCTTGGCCCATATT+TGG + chr8_1:59019676-59019695 None:intergenic 50.0%
! ACGAGACATGATGACGACTC+AGG + chr8_1:59019736-59019755 None:intergenic 50.0%
GCTTACACCTAACGGAATGG+TGG - chr8_1:59020080-59020099 Msa1203840:intron 50.0%
! AGGTTGATTCAGCCCTAAGG+AGG - chr8_1:59020329-59020348 Msa1203840:intron 50.0%
!! AGGTGTTGGTCTTGGTCCTT+TGG - chr8_1:59020809-59020828 Msa1203840:intron 50.0%
!! TGTTGGTCTTGGTCCTTTGG+AGG - chr8_1:59020812-59020831 Msa1203840:intron 50.0%
CTCATCCTGGAAGAGTTGGA+GGG - chr8_1:59020961-59020980 Msa1203840:CDS 50.0%
TGATGCCGTCTATGTTGAGC+TGG - chr8_1:59021003-59021022 Msa1203840:CDS 50.0%
ATGTTGAGCTGGATCTTGGG+TGG - chr8_1:59021014-59021033 Msa1203840:CDS 50.0%
GCTGGATCTTGGGTGGAAAT+AGG - chr8_1:59021021-59021040 Msa1203840:CDS 50.0%
TCCGAGAGCCTGCAACTTAT+TGG + chr8_1:59021153-59021172 None:intergenic 50.0%
CAAACGGACAACTACGCCAA+TGG - chr8_1:59021310-59021329 Msa1203840:intron 50.0%
AGACCTGTTTCCTCTCCACA+TGG + chr8_1:59021490-59021509 None:intergenic 50.0%
GTAGGCATACCCGATTATGC+AGG + chr8_1:59021551-59021570 None:intergenic 50.0%
CAGGGTAATTTGGAGGAACC+CGG + chr8_1:59022079-59022098 None:intergenic 50.0%
ACACGAGCAGGGTAATTTGG+AGG + chr8_1:59022086-59022105 None:intergenic 50.0%
TGGACACGAGCAGGGTAATT+TGG + chr8_1:59022089-59022108 None:intergenic 50.0%
TCATCCTTCTTCGCGATGCT+TGG + chr8_1:59022290-59022309 None:intergenic 50.0%
GCTACATACACTGCCTTCCA+TGG + chr8_1:59022494-59022513 None:intergenic 50.0%
! CTTAGGGTGCTTGTAGCAGG+TGG - chr8_1:59017025-59017044 Msa1203840:CDS 55.0%
!! GTAGCAGGTGGTGGAATTGG+TGG - chr8_1:59017037-59017056 Msa1203840:CDS 55.0%
GAGTGCCCTTAGCTTAGCCA+AGG - chr8_1:59017516-59017535 Msa1203840:intron 55.0%
GGCAGAGTTTGCCGCCTATT+TGG - chr8_1:59017587-59017606 Msa1203840:CDS 55.0%
CCTTGTGGGACCCAAATAGG+CGG + chr8_1:59017601-59017620 None:intergenic 55.0%
! GAGCCTTGTGGGACCCAAAT+AGG + chr8_1:59017604-59017623 None:intergenic 55.0%
TCAAAGCCAGCCGACCAAAG+TGG + chr8_1:59018027-59018046 None:intergenic 55.0%
TTCACTCCTGCAGTGGAACG+TGG - chr8_1:59018247-59018266 Msa1203840:intron 55.0%
TGCAGTGGAACGTGGTCTTC+CGG - chr8_1:59018255-59018274 Msa1203840:intron 55.0%
CTTCTCCAACTGCACGAGCA+AGG + chr8_1:59018318-59018337 None:intergenic 55.0%
GCAGACGATGGAAGCAAGGT+AGG - chr8_1:59018373-59018392 Msa1203840:CDS 55.0%
TTCGGTTCATCAGCACCACC+GGG + chr8_1:59019369-59019388 None:intergenic 55.0%
CAGCCAAATATGGGCCAAGG+AGG - chr8_1:59019670-59019689 Msa1203840:CDS 55.0%
TATGGGCCAAGGAGGATGCA+TGG - chr8_1:59019678-59019697 Msa1203840:CDS 55.0%
CAATGGCCATGCATCCTCCT+TGG + chr8_1:59019687-59019706 None:intergenic 55.0%
AGGAGGATGCATGGCCATTG+AGG - chr8_1:59019687-59019706 Msa1203840:CDS 55.0%
TGACTTTGCAACCTCGAGGG+AGG + chr8_1:59020045-59020064 None:intergenic 55.0%
TCTGGTGTCTGACACGACAC+TGG - chr8_1:59020472-59020491 Msa1203840:intron 55.0%
! GGCTAGAATGGCAGCTCTGA+TGG - chr8_1:59020764-59020783 Msa1203840:CDS 55.0%
! GGTCTTGGTCCTTTGGAGGT+AGG - chr8_1:59020816-59020835 Msa1203840:intron 55.0%
CCTCCAACTCTTCCAGGATG+AGG + chr8_1:59020963-59020982 None:intergenic 55.0%
CCTCATCCTGGAAGAGTTGG+AGG - chr8_1:59020960-59020979 Msa1203840:CDS 55.0%
ATCCTGGAAGAGTTGGAGGG+AGG - chr8_1:59020964-59020983 Msa1203840:CDS 55.0%
AACCTCCCTCCAACTCTTCC+AGG + chr8_1:59020969-59020988 None:intergenic 55.0%
! TTGCAGGAGTGCAGTGCAAG+AGG - chr8_1:59021723-59021742 Msa1203840:intron 55.0%
! TGCAGGAGTGCAGTGCAAGA+GGG - chr8_1:59021724-59021743 Msa1203840:intron 55.0%
TGCGGAGTGAACATGGCACT+TGG - chr8_1:59021935-59021954 Msa1203840:intron 55.0%
CATATGGGTGGACACGAGCA+GGG + chr8_1:59022097-59022116 None:intergenic 55.0%
TCATATGGGTGGACACGAGC+AGG + chr8_1:59022098-59022117 None:intergenic 55.0%
CTTCTTCGCGATGCTTGGAG+CGG + chr8_1:59022285-59022304 None:intergenic 55.0%
! AGGGTGCTTGTAGCAGGTGG+TGG - chr8_1:59017028-59017047 Msa1203840:CDS 60.0%
CCGCCTATTTGGGTCCCACA+AGG - chr8_1:59017598-59017617 Msa1203840:intron 60.0%
GGAAGACCACGTTCCACTGC+AGG + chr8_1:59018256-59018275 None:intergenic 60.0%
GGGATCCTTGCTCGTGCAGT+TGG - chr8_1:59018310-59018329 Msa1203840:CDS 60.0%
!! AGGCACTGACATGCCGACAC+CGG + chr8_1:59020542-59020561 None:intergenic 60.0%
GCGTGCGCGCCAATTGAGAA+GGG + chr8_1:59021645-59021664 None:intergenic 60.0%
! GCAGGAGTGCAGTGCAAGAG+GGG - chr8_1:59021725-59021744 Msa1203840:intron 60.0%
! CAGGAGTGCAGTGCAAGAGG+GGG - chr8_1:59021726-59021745 Msa1203840:intron 60.0%
! CGCTCCAAGCATCGCGAAGA+AGG - chr8_1:59022283-59022302 Msa1203840:CDS 60.0%
CGCGTGCGCGCCAATTGAGA+AGG + chr8_1:59021646-59021665 None:intergenic 65.0%
GCAGTGCAAGAGGGGGATCC+AGG - chr8_1:59021733-59021752 Msa1203840:intron 65.0%
AGTCTCTGCCGTTGCGCGCG+CGG - chr8_1:59017632-59017651 Msa1203840:intron 70.0%
GGTATCCTCCGCGCGCGCAA+CGG + chr8_1:59017643-59017662 None:intergenic 70.0%
! CTCTGCCGTTGCGCGCGCGG+AGG - chr8_1:59017635-59017654 Msa1203840:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59016516 59022823 59016516 ID=Msa1203840;Name=Msa1203840
chr8_1 mRNA 59016516 59022823 59016516 ID=Msa1203840-mRNA-1;Parent=Msa1203840;Name=Msa1203840-mRNA-1;_AED=0.13;_eAED=0.13;_QI=269|0.86|0.87|1|0.86|0.93|16|489|649
chr8_1 exon 59016516 59017085 59016516 ID=Msa1203840-mRNA-1:exon:19114;Parent=Msa1203840-mRNA-1
chr8_1 exon 59017197 59017281 59017197 ID=Msa1203840-mRNA-1:exon:19113;Parent=Msa1203840-mRNA-1
chr8_1 exon 59017374 59017462 59017374 ID=Msa1203840-mRNA-1:exon:19112;Parent=Msa1203840-mRNA-1
chr8_1 exon 59017556 59017610 59017556 ID=Msa1203840-mRNA-1:exon:19111;Parent=Msa1203840-mRNA-1
chr8_1 exon 59017779 59017865 59017779 ID=Msa1203840-mRNA-1:exon:19110;Parent=Msa1203840-mRNA-1
chr8_1 exon 59017966 59018030 59017966 ID=Msa1203840-mRNA-1:exon:19109;Parent=Msa1203840-mRNA-1
chr8_1 exon 59018163 59018208 59018163 ID=Msa1203840-mRNA-1:exon:19108;Parent=Msa1203840-mRNA-1
chr8_1 exon 59018297 59018400 59018297 ID=Msa1203840-mRNA-1:exon:19107;Parent=Msa1203840-mRNA-1
chr8_1 exon 59018506 59018620 59018506 ID=Msa1203840-mRNA-1:exon:19106;Parent=Msa1203840-mRNA-1
chr8_1 exon 59018989 59019080 59018989 ID=Msa1203840-mRNA-1:exon:19105;Parent=Msa1203840-mRNA-1
chr8_1 exon 59019631 59019842 59019631 ID=Msa1203840-mRNA-1:exon:19104;Parent=Msa1203840-mRNA-1
chr8_1 exon 59019949 59020092 59019949 ID=Msa1203840-mRNA-1:exon:19103;Parent=Msa1203840-mRNA-1
chr8_1 exon 59020183 59020213 59020183 ID=Msa1203840-mRNA-1:exon:19102;Parent=Msa1203840-mRNA-1
chr8_1 exon 59020740 59020814 59020740 ID=Msa1203840-mRNA-1:exon:19101;Parent=Msa1203840-mRNA-1
chr8_1 exon 59020949 59021111 59020949 ID=Msa1203840-mRNA-1:exon:19100;Parent=Msa1203840-mRNA-1
chr8_1 exon 59022049 59022823 59022049 ID=Msa1203840-mRNA-1:exon:19099;Parent=Msa1203840-mRNA-1
chr8_1 five_prime_UTR 59022555 59022823 59022555 ID=Msa1203840-mRNA-1:five_prime_utr;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59022049 59022554 59022049 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59020949 59021111 59020949 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59020740 59020814 59020740 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59020183 59020213 59020183 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59019949 59020092 59019949 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59019631 59019842 59019631 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59018989 59019080 59018989 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59018506 59018620 59018506 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59018297 59018400 59018297 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59018163 59018208 59018163 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017966 59018030 59017966 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017779 59017865 59017779 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017556 59017610 59017556 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017374 59017462 59017374 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017197 59017281 59017197 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 CDS 59017005 59017085 59017005 ID=Msa1203840-mRNA-1:cds;Parent=Msa1203840-mRNA-1
chr8_1 three_prime_UTR 59016516 59017004 59016516 ID=Msa1203840-mRNA-1:three_prime_utr;Parent=Msa1203840-mRNA-1
Gene Sequence

>Msa1203840

ATGGCTTCTACCTTATGTTACAACTCATTGAATCCATCTACAGCATCATTCTCAAGAACCCTTTTCTCAATTCCCACAAACAAAGACTTTTCATTGGAAAACACTTCATCTTTTCATAGCTATGGAAAAAACAGAGCAAAAAAACAGAGGAAGAATGTGTTTATGATGCATGTGAAAGTTAAAGCTACTGTAGCTGAAGCTACTGCAACACCTTCTTCAAAACAAGGTGAGAAGAAGAATCTTAGGGTGCTTGTAGCAGGTGGTGGAATTGGTGGATTGGTTTTTGCTTTGGCTGCAAAGAGAAAAGGATTTGAAGTGATGGTGTTTGAGAAAGATTTGAGTGCTGTGAGAGGAGAGGGACAGTATAGAGGTCCTATTCAGATACAGAGTAATGCTTTGGCTGCTTTGGAAGCTATTGATTCAGATGTTGCTGATGAAGTTATGAGAGTTGGTTGTATTACTGGTGATAGAATTAATGGTCTTGTTGATGGAGTTTCTGGTTCTTGGTACGTTAAGTTTGATACATTCACTCCTGCAGTGGAACGTGGTCTTCCGGTCACAAGAGTTATTAGCCGAATGACTTTGCAAGGGATCCTTGCTCGTGCAGTTGGAGAAGATATTGTTCTGAATGCCAGTAATGTCGTTAATTTTGCAGACGATGGAAGCAAGGTAACAGTAGAGCTCGAGAATGGTCAAAAATATGAAGGAGACCTATTGGTTGGAGCAGATGGTATATGGTCGAAGATTTTGTGCCTGCTGACATTGAATCTGTTGGAAGCTTACTTAAACTATTCTTTGGGAAGGTACCGAGTATTCTTGGGACACAAACAATACTTTGTATCTTCAGATGTTGGAGGCGGAAAGATGCAATGGTATGCGTTTCACAAAGAAGCTCCCGGTGGTGCTGATGAACCGAATAAAAAAAAGGAAAGGTTGCTCAAGATATTTAAGGGCTGGTGTGATAATACGATAGATCTCATACTTGCCACAGATGAAGAGGCCATTCTGCGACGAGACATCTACGACAGAATACCGACATTTAAATGGGGAAAGGGTCGTGTTACTTTGCTTGGTGATTCAGTCCATGCCATGCAGCCAAATATGGGCCAAGGAGGATGCATGGCCATTGAGGACAGTTATCAACTTGCAAAGGAGTTGGACAATGCATGGGAACAAAGTATTAAATCAGGGAACCCAATTAAGGTTGATTCAGCCCTAAGGAGCTATGAAAGTGAAAGAAAACTGCGAGTTGCAGTTATTCACGGGATGGCTAGAATGGCAGCTCTGATGGCTTCCACTTACAAGGCATATCTAGGTGTTGGTCTTGGTCCTTTGGAGTTTTTGACCAACTTTCGCATACCTCATCCTGGAAGAGTTGGAGGGAGGTTTTTTGTCGACATTTTGATGCCGTCTATGTTGAGCTGGATCTTGGGTGGAAATAGTGACAAACTTGAAGGTAGACCAATAAGTTGCAGGCTCTCGGACAAAGCAAACGGACAACTACGCCAATGGTTTGAAGATGATGATGCACTTGAGCGTGCTATTAACGGAGAGTGGTTTTTATTACCATGTGGAGAGGAAACAGGTCTTTCAAAACCGATACGTTTAACACAAAATGAGATGAAACCCTGCATAATCGGGAGTGCAGTGCAAGAGGGGGATCCAGGTAGCTCAATTACAATTACTTCACCCAAGGTTTCTCCAACGCATGCTCGAATTTACTACAAGGATGGAGCCTTCTTCGTAACTGATATGCGGAGTGAACATGGCACTTGGATCGCCGATATTGAAGGAAAGCGATACCGGGTTCCTCCAAATTACCCTGCTCGTGTCCACCCATATGATGTTCTTCAGTTTGGTTCTGAGAAGGTTTCATTTCGAGTTAAGGTGAAAAGTTCCGCTCCAAGCATCGCGAAGAAGGATGAGACACAAGTTTTGCTGCAAGTATGA

Protein sequence

>Msa1203840

MASTLCYNSLNPSTASFSRTLFSIPTNKDFSLENTSSFHSYGKNRAKKQRKNVFMMHVKVKATVAEATATPSSKQGEKKNLRVLVAGGGIGGLVFALAAKRKGFEVMVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDSDVADEVMRVGCITGDRINGLVDGVSGSWYVKFDTFTPAVERGLPVTRVISRMTLQGILARAVGEDIVLNASNVVNFADDGSKVTVELENGQKYEGDLLVGADGIWSKILCLLTLNLLEAYLNYSLGRYRVFLGHKQYFVSSDVGGGKMQWYAFHKEAPGGADEPNKKKERLLKIFKGWCDNTIDLILATDEEAILRRDIYDRIPTFKWGKGRVTLLGDSVHAMQPNMGQGGCMAIEDSYQLAKELDNAWEQSIKSGNPIKVDSALRSYESERKLRVAVIHGMARMAALMASTYKAYLGVGLGPLEFLTNFRIPHPGRVGGRFFVDILMPSMLSWILGGNSDKLEGRPISCRLSDKANGQLRQWFEDDDALERAINGEWFLLPCGEETGLSKPIRLTQNEMKPCIIGSAVQEGDPGSSITITSPKVSPTHARIYYKDGAFFVTDMRSEHGTWIADIEGKRYRVPPNYPARVHPYDVLQFGSEKVSFRVKVKSSAPSIAKKDETQVLLQV*