AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1351380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351380 MtrunA17_Chr3g0126911 91.480 669 32 5 1 658 1 655 0.0 1249
Msa1351380 MtrunA17_Chr6g0453261 48.141 511 231 8 145 648 268 751 2.89e-157 471
Msa1351380 MtrunA17_Chr8g0345941 39.925 531 275 14 137 648 83 588 2.61e-110 345
Msa1351380 MtrunA17_Chr1g0189131 39.197 523 274 12 145 648 83 580 9.87e-106 333
Msa1351380 MtrunA17_Chr4g0051911 31.836 512 309 15 146 647 484 965 6.59e-61 219
Msa1351380 MtrunA17_Chr2g0288461 31.008 516 270 18 145 647 659 1101 2.35e-51 192
Msa1351380 MtrunA17_Chr5g0411441 24.306 576 352 21 85 638 145 658 7.77e-25 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1351380 AT5G24300.2 69.384 601 165 5 71 658 57 651 0.0 863
Msa1351380 AT5G24300.1 69.384 601 165 5 71 658 57 651 0.0 863
Msa1351380 AT3G01180.1 49.119 511 226 8 145 648 302 785 6.65e-164 490
Msa1351380 AT1G32900.1 39.771 523 271 13 145 648 85 582 1.37e-101 323
Msa1351380 AT4G18240.1 32.809 509 308 13 146 647 544 1025 5.49e-65 232
Msa1351380 AT1G11720.1 31.384 513 271 17 145 647 595 1036 2.86e-53 198
Msa1351380 AT1G11720.2 31.384 513 271 17 145 647 647 1088 3.62e-53 197

Find 229 sgRNAs with CRISPR-Local

Find 646 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATTACATATAGCAATT+TGG 0.127091 tig0012204:+37192 Msa1351380:CDS
GCCACCTTGCGTTCTATTTC+CGG 0.159502 tig0012204:+33238 Msa1351380:CDS
CAGAAACTCAAGGGAATTTA+AGG 0.192171 tig0012204:+34237 Msa1351380:CDS
TATTCTGCCGACGACATTTC+TGG 0.194285 tig0012204:+38745 Msa1351380:CDS
TCCAGAGAGATTGACGATTT+TGG 0.194928 tig0012204:+33340 Msa1351380:CDS
CGCTTGACTCCTCATGATTC+TGG 0.202062 tig0012204:+33379 Msa1351380:CDS
GAATCAAGTCAATACCTTTC+TGG 0.244261 tig0012204:-39016 None:intergenic
GCAATTACATATAGCAATTT+GGG 0.248798 tig0012204:+37193 Msa1351380:CDS
CTCTTTCCATATCTAATTCA+TGG 0.252798 tig0012204:+32899 Msa1351380:five_prime_UTR
AGACAAGCACGGGACGTTTA+AGG 0.276845 tig0012204:+34770 Msa1351380:CDS
TCATATCTGCTTTCAGCAAT+AGG 0.289960 tig0012204:-40764 None:intergenic
CCAAAGCAAAATACATTGAT+AGG 0.297203 tig0012204:-34512 None:intergenic
GTAGGTTTCTTGAGCTTAGA+AGG 0.299063 tig0012204:-33208 None:intergenic
TTGTTTGCAATTTGCATAGA+TGG 0.304464 tig0012204:+41287 Msa1351380:three_prime_UTR
CTCACGATTCTTACCGCAAT+TGG 0.320425 tig0012204:+33180 Msa1351380:CDS
CATAAGGATTCCCTGGTCTA+TGG 0.321028 tig0012204:-34746 None:intergenic
GATACTGTATTGCAGACTTT+TGG 0.333460 tig0012204:+35321 Msa1351380:intron
TTAGATATGGAAAGAGAAAA+AGG 0.344603 tig0012204:-32892 None:intergenic
CATAGACCAGGGAATCCTTA+TGG 0.351574 tig0012204:+34747 Msa1351380:CDS
TATTATATCTTACCCTTGTT+GGG 0.355174 tig0012204:+40996 Msa1351380:three_prime_UTR
ATATTATATCTTACCCTTGT+TGG 0.357626 tig0012204:+40995 Msa1351380:three_prime_UTR
ATACCAGTAGTTCATGAAAC+AGG 0.367040 tig0012204:+40025 Msa1351380:CDS
AATCATTGAGTGGGCATTCA+TGG 0.370383 tig0012204:+40735 Msa1351380:CDS
ACAACTACAGAGGGTGGATT+TGG 0.370411 tig0012204:+37947 Msa1351380:CDS
TCTTCTGCATTCCCAATCTC+TGG 0.372149 tig0012204:-34278 None:intergenic
GTTAGCAAGGAGGGATTTGC+TGG 0.376689 tig0012204:+41362 Msa1351380:three_prime_UTR
TAAAGATAAATTTCGTGGTT+GGG 0.379084 tig0012204:+39739 Msa1351380:CDS
CATATCTGCTTTCAGCAATA+GGG 0.379828 tig0012204:-40763 None:intergenic
GCCTATTCCTCGTTAATGAT+TGG 0.380274 tig0012204:+34980 Msa1351380:CDS
TGGGATGGGTATTCCCTACT+TGG 0.385282 tig0012204:+37242 Msa1351380:CDS
CCTCCCAATGGAAGCACTAA+TGG 0.385678 tig0012204:-34937 None:intergenic
CAGTTGTATGCAATGAGATA+TGG 0.387558 tig0012204:+39998 Msa1351380:CDS
CGATCCCTTTCCTCCTGCAT+TGG 0.395657 tig0012204:+33040 Msa1351380:five_prime_UTR
TCGTCCATATGGGGTATATA+AGG 0.396089 tig0012204:+35354 Msa1351380:CDS
CCGCGACCCGCCAGTGCTAT+TGG 0.397516 tig0012204:-34404 None:intergenic
TGATCATCTTCAAAGGAAAT+AGG 0.398543 tig0012204:-33298 None:intergenic
GCAGTTATTCTATGAGATAC+TGG 0.400477 tig0012204:-39776 None:intergenic
GCCTTCAGCATTGCATCCTT+CGG 0.400496 tig0012204:-40182 None:intergenic
ACCAAAATCGTCAATCTCTC+TGG 0.401513 tig0012204:-33341 None:intergenic
TGCATACACTGAAACTAAAC+TGG 0.401674 tig0012204:-35007 None:intergenic
CTCATCCAGTCTTCATATAT+AGG 0.407433 tig0012204:-39698 None:intergenic
AAATTTCCACAGGGACTACT+TGG 0.407761 tig0012204:-41052 None:intergenic
GATCAACCATGAATTAGATA+TGG 0.419127 tig0012204:-32905 None:intergenic
AAATTGCTATATGTAATTGC+AGG 0.420448 tig0012204:-37190 None:intergenic
GCATCGCTTCCTCCAGCAAA+TGG 0.423925 tig0012204:-40160 None:intergenic
GCATCAAAGTATCGTCCATA+TGG 0.424357 tig0012204:+35343 Msa1351380:CDS
ACACAAGCTTGAGCTTTGAT+TGG 0.431131 tig0012204:+41113 Msa1351380:three_prime_UTR
TCAAGAATGGTATGGAGCAC+TGG 0.432494 tig0012204:+37222 Msa1351380:CDS
ATAATGAACACAAGTCTTCA+TGG 0.432708 tig0012204:+40644 Msa1351380:CDS
CCTTCTTTCGTATAGTCTCA+TGG 0.433365 tig0012204:+33075 Msa1351380:exon
AATCGTGACCGAGTGATAAC+AGG 0.435316 tig0012204:+40875 Msa1351380:three_prime_UTR
CCATTGGGAGGGTTCACTTA+CGG 0.438789 tig0012204:+34949 Msa1351380:CDS
CGGGACGTTTAAGGATAATC+AGG 0.439356 tig0012204:+34779 Msa1351380:CDS
CTGAAGAAGTGCGGGTATGA+TGG 0.440710 tig0012204:-33126 None:intergenic
TTTCAGGTAATGCTTGGTTC+GGG 0.440926 tig0012204:+39671 Msa1351380:intron
GCCAATCATTAACGAGGAAT+AGG 0.443305 tig0012204:-34981 None:intergenic
CTTTATAAAGATAAATTTCG+TGG 0.443734 tig0012204:+39734 Msa1351380:CDS
GGTGGCCTTGCAGATGTTTG+TGG 0.444403 tig0012204:+34374 Msa1351380:CDS
ATAGGTCCGTCTGGTGAAGC+AGG 0.444784 tig0012204:-33280 None:intergenic
GAGCTCACCACTGGACAATC+AGG 0.446530 tig0012204:-38902 None:intergenic
GGGTCGCGGACACCGTGTTA+TGG 0.449119 tig0012204:+34418 Msa1351380:CDS
GATAAATTTCGTGGTTGGGT+TGG 0.449687 tig0012204:+39743 Msa1351380:CDS
ACGAGCTCTCAACGGCGGTT+AGG 0.453333 tig0012204:+41186 Msa1351380:three_prime_UTR
ACATATCTAGCCTTGATAAT+CGG 0.454953 tig0012204:-40827 None:intergenic
ATTCTGCCGACGACATTTCT+GGG 0.455059 tig0012204:+38746 Msa1351380:CDS
GTGTTCATTATATGTTTGAA+TGG 0.457516 tig0012204:-40632 None:intergenic
ATAAAGATAAATTTCGTGGT+TGG 0.461080 tig0012204:+39738 Msa1351380:CDS
GAAAAGATGGCTTGCACAGA+TGG 0.464285 tig0012204:+41317 Msa1351380:three_prime_UTR
TGGTTCTTTGCCAATAGCAC+TGG 0.466231 tig0012204:+34394 Msa1351380:CDS
ATTGCCTTGCAGAAGGAGTT+GGG 0.466895 tig0012204:+38866 Msa1351380:CDS
AATGTCGTCGGCAGAATAGT+TGG 0.468552 tig0012204:-38740 None:intergenic
GCATCCTTATATACCCCATA+TGG 0.470122 tig0012204:-35358 None:intergenic
GCAGTACCATGTACGTATCT+AGG 0.472827 tig0012204:-34449 None:intergenic
GCAATATGTTCATCAGATGA+TGG 0.474624 tig0012204:-38715 None:intergenic
TATTAACTAGGGATCACAAA+TGG 0.478291 tig0012204:+38670 Msa1351380:intron
CACCCTTCATTCCATAGACC+AGG 0.479990 tig0012204:+34735 Msa1351380:CDS
AGAGGGTGGATTTGGTCTAC+AGG 0.480693 tig0012204:+37955 Msa1351380:CDS
GATTGCCTTGCAGAAGGAGT+TGG 0.484930 tig0012204:+38865 Msa1351380:CDS
GGATGCAATGCTGAAGGCAC+GGG 0.488330 tig0012204:+40187 Msa1351380:CDS
CAACACCTTCTCTATACTCA+TGG 0.490842 tig0012204:-34559 None:intergenic
TTCCCTGGTCTATGGAATGA+AGG 0.492921 tig0012204:-34738 None:intergenic
AGTATAGAGAAGGTGTTGAC+TGG 0.493004 tig0012204:+34564 Msa1351380:CDS
AACTTGTAGATTGGATTCGT+TGG 0.494340 tig0012204:+38981 Msa1351380:intron
TTGTCTCCATAAGGATTCCC+TGG 0.496184 tig0012204:-34753 None:intergenic
CATCAAAGTATCGTCCATAT+GGG 0.499600 tig0012204:+35344 Msa1351380:CDS
TTTGAAGATGATCAAGATAG+AGG 0.504728 tig0012204:+33307 Msa1351380:CDS
CCACACGGCTCGAATGTTGA+TGG 0.511227 tig0012204:-39968 None:intergenic
GAAATCCTATATATGAAGAC+TGG 0.512634 tig0012204:+39693 Msa1351380:CDS
CATTAGTGCTTCCATTGGGA+GGG 0.512771 tig0012204:+34938 Msa1351380:CDS
CCAATAGCACTGGCGGGTCG+CGG 0.513395 tig0012204:+34404 Msa1351380:CDS
GGAAGACTTGATTACCAGAA+AGG 0.515076 tig0012204:+39002 Msa1351380:CDS
AAGACCAATGCAGGAGGAAA+GGG 0.515425 tig0012204:-33044 None:intergenic
TATGTGCAACCCTCAACAAA+TGG 0.515991 tig0012204:-40975 None:intergenic
GTCCCGTGCTTGTCTCCATA+AGG 0.516878 tig0012204:-34762 None:intergenic
TTCTTTGCCAATAGCACTGG+CGG 0.517880 tig0012204:+34397 Msa1351380:CDS
CCATGAGACTATACGAAAGA+AGG 0.519616 tig0012204:-33075 None:intergenic
TCAAAGGAAATAGGTCCGTC+TGG 0.521679 tig0012204:-33289 None:intergenic
GCACCATTAGTGCTTCCATT+GGG 0.522997 tig0012204:+34934 Msa1351380:CDS
TTTGGAGGCGCTCAAGAAGT+TGG 0.523145 tig0012204:+34530 Msa1351380:CDS
ATCATGGATGTTAGCAAGGA+GGG 0.523356 tig0012204:+41353 Msa1351380:three_prime_UTR
AGATGGAAATAATGAAAAGA+TGG 0.523416 tig0012204:+41304 Msa1351380:three_prime_UTR
ACATCGTCTTGCATAAGCTC+TGG 0.524359 tig0012204:-39050 None:intergenic
GGAAGCACCGTCAGTGTCAC+CGG 0.524701 tig0012204:-33257 None:intergenic
GAGAGATTACACCTGGGAAA+AGG 0.525113 tig0012204:+40693 Msa1351380:CDS
TGGGAGGGATTGATGAAAAG+AGG 0.525349 tig0012204:+40664 Msa1351380:CDS
GACAAAGGAGAGAATGTTAG+TGG 0.526783 tig0012204:+40380 Msa1351380:CDS
GAAGGAAGGAAGACCAATGC+AGG 0.527438 tig0012204:-33053 None:intergenic
TGGAATTGATGTTACTGAAT+GGG 0.528155 tig0012204:+38690 Msa1351380:CDS
GAAGACCAATGCAGGAGGAA+AGG 0.529061 tig0012204:-33045 None:intergenic
TGGTGCTTCACATGCTGCAT+GGG 0.529783 tig0012204:-34917 None:intergenic
ATGGAATTGATGTTACTGAA+TGG 0.529859 tig0012204:+38689 Msa1351380:CDS
TGCCGACGACATTTCTGGGA+AGG 0.532122 tig0012204:+38750 Msa1351380:CDS
AGGTATTGACTTGATTCGCC+AGG 0.532994 tig0012204:+39022 Msa1351380:CDS
CAAGAATGGTATGGAGCACT+GGG 0.534663 tig0012204:+37223 Msa1351380:CDS
AGCACCATTAGTGCTTCCAT+TGG 0.535525 tig0012204:+34933 Msa1351380:CDS
GCTTCCCCTGCTTCACCAGA+CGG 0.535866 tig0012204:+33274 Msa1351380:CDS
GTATCTCATAGAATAACTGC+AGG 0.537384 tig0012204:+39779 Msa1351380:CDS
TTGGTATGAGAAGGTCGAGT+TGG 0.539638 tig0012204:-33151 None:intergenic
AGGCCACCAGTCTTAGAATA+CGG 0.539910 tig0012204:-34359 None:intergenic
CATGTGTCCTCGCCCAAGTA+GGG 0.540027 tig0012204:-37255 None:intergenic
GTCTAAGGACGAGCTCTCAA+CGG 0.540245 tig0012204:+41178 Msa1351380:three_prime_UTR
GCATAAGCTCTGGAATTGCC+TGG 0.541731 tig0012204:-39040 None:intergenic
CTCGTCCTTAGACTATGAAA+AGG 0.542308 tig0012204:-41168 None:intergenic
ATTTGGGGCTGCCTCAAGAA+TGG 0.545045 tig0012204:+37209 Msa1351380:CDS
ATGGTATGGAGCACTGGGAT+GGG 0.545273 tig0012204:+37228 Msa1351380:CDS
GCATGTGTCCTCGCCCAAGT+AGG 0.545911 tig0012204:-37256 None:intergenic
AGGATGCAATGCTGAAGGCA+CGG 0.547103 tig0012204:+40186 Msa1351380:CDS
TGTAACTATGTATGAAGCAA+TGG 0.549322 tig0012204:+41077 Msa1351380:three_prime_UTR
CCATTAGTGCTTCCATTGGG+AGG 0.551894 tig0012204:+34937 Msa1351380:CDS
CAAAGCAAAATACATTGATA+GGG 0.553823 tig0012204:-34511 None:intergenic
TCAAATGAGGCAGAGAAAGA+AGG 0.556512 tig0012204:-40905 None:intergenic
CCTTTGTGAAGCACGTGATA+CGG 0.557425 tig0012204:-41217 None:intergenic
AACATTCTCTCCTTTGTCAG+TGG 0.558022 tig0012204:-40375 None:intergenic
CAAGCAGCTGGTCTCAAATG+AGG 0.564126 tig0012204:-40918 None:intergenic
GCTGCACCGTATTCTAAGAC+TGG 0.565136 tig0012204:+34353 Msa1351380:CDS
ATGGTGCTTCACATGCTGCA+TGG 0.565149 tig0012204:-34918 None:intergenic
AAATATCATGGATGTTAGCA+AGG 0.566439 tig0012204:+41349 Msa1351380:three_prime_UTR
ATCCTTATGGAGACAAGCAC+GGG 0.566822 tig0012204:+34760 Msa1351380:CDS
TGGGAATGCAGAAGATGAGA+AGG 0.567156 tig0012204:+34286 Msa1351380:CDS
AGTTGGAGCTGAAGAAGTGC+GGG 0.569588 tig0012204:-33134 None:intergenic
TCTATCTTGATCATCTTCAA+AGG 0.574748 tig0012204:-33305 None:intergenic
GCGCCATTGTTACTGCTGAT+CGG 0.576090 tig0012204:+37314 Msa1351380:CDS
TAGGTTTCTTGAGCTTAGAA+GGG 0.578297 tig0012204:-33207 None:intergenic
TAAGAATCGTGAGGAACTGT+TGG 0.578445 tig0012204:-33170 None:intergenic
GTATGACGAGAGATTACACC+TGG 0.578921 tig0012204:+40686 Msa1351380:CDS
ACTGGACAATCAGGTCGCAC+TGG 0.579346 tig0012204:-38893 None:intergenic
AGGACACATGCTCTTGACAC+AGG 0.582246 tig0012204:+37268 Msa1351380:CDS
AATGGTATGGAGCACTGGGA+TGG 0.583206 tig0012204:+37227 Msa1351380:CDS
TCCCTGGTCTATGGAATGAA+GGG 0.587551 tig0012204:-34737 None:intergenic
ATGTAAGATTGCCTTGCAGA+AGG 0.587967 tig0012204:+38859 Msa1351380:CDS
TAATGAACACAAGTCTTCAT+GGG 0.588417 tig0012204:+40645 Msa1351380:CDS
TGTCTATAGTAGTGTGTGTG+TGG 0.588836 tig0012204:-32979 None:intergenic
GAACACAAGTCTTCATGGGA+GGG 0.590428 tig0012204:+40649 Msa1351380:CDS
GATTCACAATATTGCACACC+AGG 0.590518 tig0012204:+35396 Msa1351380:CDS
CTATACGAAAGAAGGAAGGA+AGG 0.593060 tig0012204:-33067 None:intergenic
GAGACAACTGCAGAAACTCA+AGG 0.593112 tig0012204:+34227 Msa1351380:CDS
TCTTTGCCAATAGCACTGGC+GGG 0.593606 tig0012204:+34398 Msa1351380:CDS
GGGATGGGTATTCCCTACTT+GGG 0.594136 tig0012204:+37243 Msa1351380:CDS
GAGGAACTGTTGGTATGAGA+AGG 0.594475 tig0012204:-33160 None:intergenic
GGATGTGGTGGCACCGTACG+AGG 0.595458 tig0012204:+32764 None:intergenic
TAGGTCCGTCTGGTGAAGCA+GGG 0.596649 tig0012204:-33279 None:intergenic
CAATATGTTCATCAGATGAT+GGG 0.596741 tig0012204:-38714 None:intergenic
GGGCTGCCTCAAGAATGGTA+TGG 0.598454 tig0012204:+37214 Msa1351380:CDS
AATCCTTATGGAGACAAGCA+CGG 0.600419 tig0012204:+34759 Msa1351380:CDS
TCTATTTCCGGTGACACTGA+CGG 0.601830 tig0012204:+33250 Msa1351380:CDS
GGGTATTCCCTACTTGGGCG+AGG 0.603588 tig0012204:+37248 Msa1351380:CDS
CCGTAAGTGAACCCTCCCAA+TGG 0.604219 tig0012204:-34949 None:intergenic
ATCTGCTTTCAGCAATAGGG+TGG 0.605343 tig0012204:-40760 None:intergenic
GCCGAAGGATGCAATGCTGA+AGG 0.605754 tig0012204:+40181 Msa1351380:CDS
TACCAGTAGTTCATGAAACA+GGG 0.607738 tig0012204:+40026 Msa1351380:CDS
ATGTGATCCGTGCATTCTGT+TGG 0.608368 tig0012204:+32935 Msa1351380:five_prime_UTR
TACACAGCCAACAGAATGCA+CGG 0.609926 tig0012204:-32942 None:intergenic
AATGATTTGCTCGTATTGAG+CGG 0.611048 tig0012204:-40719 None:intergenic
ATACGAGCAAATCATTGAGT+GGG 0.612574 tig0012204:+40726 Msa1351380:CDS
GTCACCGGAAATAGAACGCA+AGG 0.614436 tig0012204:-33242 None:intergenic
GCCACCTTCCTGTTATCACT+CGG 0.615007 tig0012204:-40883 None:intergenic
AATACGAGCAAATCATTGAG+TGG 0.616706 tig0012204:+40725 Msa1351380:CDS
CAATTACATATAGCAATTTG+GGG 0.620521 tig0012204:+37194 Msa1351380:CDS
AGAATACATACAGCCCAACA+AGG 0.626102 tig0012204:-41009 None:intergenic
TCGGATAGTAACAGTAAGCA+AGG 0.627715 tig0012204:+37333 Msa1351380:CDS
GAGACTATACGAAAGAAGGA+AGG 0.628629 tig0012204:-33071 None:intergenic
TATCCGATCAGCAGTAACAA+TGG 0.634823 tig0012204:-37317 None:intergenic
AGACAACTGCAGAAACTCAA+GGG 0.634989 tig0012204:+34228 Msa1351380:CDS
GAGTTGGAGCTGAAGAAGTG+CGG 0.635111 tig0012204:-33135 None:intergenic
ATCTCTCCTAGATACGTACA+TGG 0.636965 tig0012204:+34443 Msa1351380:CDS
AGGTCCGTCTGGTGAAGCAG+GGG 0.637766 tig0012204:-33278 None:intergenic
GAGATAACAACTACAGAGGG+TGG 0.639042 tig0012204:+37941 Msa1351380:CDS
AACCTTCCCAGAAATGTCGT+CGG 0.640361 tig0012204:-38752 None:intergenic
GCTGGAGGAAGCGATGCCGA+AGG 0.640969 tig0012204:+40166 Msa1351380:CDS
TATCTAGCCTTGATAATCGG+AGG 0.641442 tig0012204:-40824 None:intergenic
TGGGAGATAACAACTACAGA+GGG 0.645945 tig0012204:+37938 Msa1351380:CDS
GTATAGAGAAGGTGTTGACT+GGG 0.646125 tig0012204:+34565 Msa1351380:CDS
AGTGCTCCATACCATTCTTG+AGG 0.647241 tig0012204:-37220 None:intergenic
TGAACACAAGTCTTCATGGG+AGG 0.650187 tig0012204:+40648 Msa1351380:CDS
ATCAAAGTATCGTCCATATG+GGG 0.651283 tig0012204:+35345 Msa1351380:CDS
ATCATGAGGAGTCAAGCGAA+AGG 0.653378 tig0012204:-33374 None:intergenic
AAGACCCAACTCCTTCTGCA+AGG 0.654288 tig0012204:-38870 None:intergenic
CCATCAACATTCGAGCCGTG+TGG 0.657248 tig0012204:+39968 Msa1351380:CDS
TACAACTGATTTAGTCCACA+CGG 0.660228 tig0012204:-39983 None:intergenic
CCGTATCACGTGCTTCACAA+AGG 0.660887 tig0012204:+41217 Msa1351380:three_prime_UTR
AAGAACCACAAACATCTGCA+AGG 0.663774 tig0012204:-34379 None:intergenic
GGAAGGAAGACCAATGCAGG+AGG 0.665430 tig0012204:-33050 None:intergenic
GAATACATACAGCCCAACAA+GGG 0.665570 tig0012204:-41008 None:intergenic
GCACCGTATTCTAAGACTGG+TGG 0.666033 tig0012204:+34356 Msa1351380:CDS
AGATAGATACCAGAATCATG+AGG 0.666968 tig0012204:-33388 None:intergenic
GATTTGCTCGTATTGAGCGG+CGG 0.669443 tig0012204:-40716 None:intergenic
TATCATGGATGTTAGCAAGG+AGG 0.670236 tig0012204:+41352 Msa1351380:three_prime_UTR
GGGCTGTATGTATTCTACGA+TGG 0.673860 tig0012204:+41016 Msa1351380:three_prime_UTR
ACCCTTCATTCCATAGACCA+GGG 0.674753 tig0012204:+34736 Msa1351380:CDS
AATCAGCCAAGTAGTCCCTG+TGG 0.675529 tig0012204:+41046 Msa1351380:three_prime_UTR
ACTAGAAAACTTACTATCAG+CGG 0.677717 tig0012204:-34471 None:intergenic
ACCGAGTGATAACAGGAAGG+TGG 0.679952 tig0012204:+40882 Msa1351380:three_prime_UTR
ACCAGTAGTTCATGAAACAG+GGG 0.682127 tig0012204:+40027 Msa1351380:CDS
TTAGAAGGGAAAGCCAATTG+CGG 0.684978 tig0012204:-33193 None:intergenic
TTGGGAGATAACAACTACAG+AGG 0.686211 tig0012204:+37937 Msa1351380:CDS
GTATGATGGAGAAAGAGACG+AGG 0.689249 tig0012204:-33112 None:intergenic
TATGATGGAGAAAGAGACGA+GGG 0.695047 tig0012204:-33111 None:intergenic
GATGCAATGCTGAAGGCACG+GGG 0.696578 tig0012204:+40188 Msa1351380:CDS
TATCTCATAGAATAACTGCA+GGG 0.703392 tig0012204:+39780 Msa1351380:CDS
CCAGTAGTTCATGAAACAGG+GGG 0.705069 tig0012204:+40028 Msa1351380:CDS
ACCGGAAATAGAACGCAAGG+TGG 0.720708 tig0012204:-33239 None:intergenic
AGTGCGACCTGATTGTCCAG+TGG 0.724308 tig0012204:+38895 Msa1351380:CDS
TGGCATGCCAATCATTAACG+AGG 0.731653 tig0012204:-34987 None:intergenic
GTGACCGAGTGATAACAGGA+AGG 0.732980 tig0012204:+40879 Msa1351380:three_prime_UTR
TAAGGACGAGCTCTCAACGG+CGG 0.733893 tig0012204:+41181 Msa1351380:three_prime_UTR
TAGGAGAGATAACCATAACA+CGG 0.743995 tig0012204:-34430 None:intergenic
CAATTGCGGTAAGAATCGTG+AGG 0.746620 tig0012204:-33179 None:intergenic
TATGACGAGAGATTACACCT+GGG 0.773744 tig0012204:+40687 Msa1351380:CDS
GATAGAAAGAGTATTCTGAG+CGG 0.785538 tig0012204:+37989 Msa1351380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTTATTTTTAT+TGG - tig0012204:32793-32812 None:intergenic 0.0%
!!! ATTTTTATTTTTATTTTATA+GGG - tig0012204:39866-39885 None:intergenic 0.0%
!!! TATTTTTATTTTTATTTTAT+AGG - tig0012204:39867-39886 None:intergenic 0.0%
!! TTATTATTATTCATATATCA+AGG - tig0012204:34853-34872 None:intergenic 10.0%
!! AAACTAAATAAATAAACAAA+TGG - tig0012204:35431-35450 None:intergenic 10.0%
!!! GTTTATTTATTTAGTTTTTT+TGG + tig0012204:35434-35453 Msa1351380:intron 10.0%
!! TCAAAAATATATTAATCATA+AGG - tig0012204:35835-35854 None:intergenic 10.0%
!!! TTTTATATATTGAAATATGA+AGG - tig0012204:40483-40502 None:intergenic 10.0%
!!! CATAATTTTTGTTTCTAAAA+TGG - tig0012204:34153-34172 None:intergenic 15.0%
!! AAAATAAAAAGATTAAAGGT+AGG - tig0012204:35035-35054 None:intergenic 15.0%
!! ATGGAAAATAAAAAGATTAA+AGG - tig0012204:35039-35058 None:intergenic 15.0%
!!! TTTTCTCTTTATTAAAATGT+TGG + tig0012204:35099-35118 Msa1351380:intron 15.0%
!! AAAAAATGTATTTGGAAATA+AGG - tig0012204:35212-35231 None:intergenic 15.0%
!! AGCTTAATAAAAAATGTATT+TGG - tig0012204:35220-35239 None:intergenic 15.0%
!! TAATTATATCCAATATAAAC+TGG + tig0012204:36812-36831 Msa1351380:intron 15.0%
!!! ATTTTCTTATTTTCTTTTTC+TGG - tig0012204:38326-38345 None:intergenic 15.0%
!!! AAATTGGTAAAATATGATTT+TGG + tig0012204:39223-39242 Msa1351380:intron 15.0%
!! AAAACAAGCAAAATATTAAT+CGG - tig0012204:39251-39270 None:intergenic 15.0%
!! GAAATGAAATTATTAATACA+AGG - tig0012204:39561-39580 None:intergenic 15.0%
!! AATATAAGATACATATATTG+TGG - tig0012204:39811-39830 None:intergenic 15.0%
!! TTGTTATAAATTTCATTAAC+AGG + tig0012204:40340-40359 Msa1351380:intron 15.0%
!!! ACATTTTACAATTTTTTGAT+AGG - tig0012204:41144-41163 None:intergenic 15.0%
!! ATAAAAAATATTCATGTCGA+TGG + tig0012204:32839-32858 Msa1351380:five_prime_UTR 20.0%
!!! ATCTAGAGTTTTATTAGTAT+TGG + tig0012204:32869-32888 Msa1351380:five_prime_UTR 20.0%
!! AAAGAGGAAATAAAAAAGAA+AGG - tig0012204:33425-33444 None:intergenic 20.0%
!!! TAGTATGTTACTTGTTATAA+TGG + tig0012204:33547-33566 Msa1351380:intron 20.0%
!!! ATCTTATTGTTTTATTCAAC+AGG + tig0012204:33628-33647 Msa1351380:intron 20.0%
!!! TCTTATTGTTTTATTCAACA+GGG + tig0012204:33629-33648 Msa1351380:intron 20.0%
!! AATAATATGATCTTAGGATT+GGG - tig0012204:34018-34037 None:intergenic 20.0%
!! TGTAACAATAATATGATCTT+AGG - tig0012204:34024-34043 None:intergenic 20.0%
!! TAAGATCATATTATTGTTAC+AGG + tig0012204:34023-34042 Msa1351380:intron 20.0%
!! AAAAAGAAAAAAGACAGAAA+AGG - tig0012204:34600-34619 None:intergenic 20.0%
!! TATTATTCATATATCAAGGA+TGG - tig0012204:34849-34868 None:intergenic 20.0%
!!! TAATAAATTTTCTTCTCCTT+TGG + tig0012204:34867-34886 Msa1351380:intron 20.0%
!! ATGATCTAATTTATAGAATG+TGG - tig0012204:35579-35598 None:intergenic 20.0%
!! CATTCTATAAATTAGATCAT+AGG + tig0012204:35579-35598 Msa1351380:intron 20.0%
!! AATAAATACTCTGTTAATCA+CGG + tig0012204:35623-35642 Msa1351380:intron 20.0%
!!! CAATGAGATCATATTTTATA+TGG - tig0012204:36070-36089 None:intergenic 20.0%
!! CATATAAAATATGATCTCAT+TGG + tig0012204:36068-36087 Msa1351380:intron 20.0%
!! AAGTATTTGTGGTTTAAATT+AGG + tig0012204:36301-36320 Msa1351380:intron 20.0%
!!! TTGCTGATAAATAGTTTTTT+GGG - tig0012204:36656-36675 None:intergenic 20.0%
!!! TTTGCTGATAAATAGTTTTT+TGG - tig0012204:36657-36676 None:intergenic 20.0%
!!! GCAAAGAAAGAAAAATATTT+TGG + tig0012204:36672-36691 Msa1351380:intron 20.0%
!! TTATATAGAAATATGATGAC+CGG + tig0012204:36731-36750 Msa1351380:intron 20.0%
!! AAATTCTATTAAACCTGAAA+AGG - tig0012204:37850-37869 None:intergenic 20.0%
!! ATGCAATGAAATACTTATTA+TGG + tig0012204:38057-38076 Msa1351380:intron 20.0%
!!! GTTAAGTTTTAGATCATATT+TGG + tig0012204:38147-38166 Msa1351380:intron 20.0%
!! TTTGTGGTAAATATTGATAT+TGG + tig0012204:38178-38197 Msa1351380:intron 20.0%
!! AAAGAAAAATTGATAAGAAC+TGG - tig0012204:38303-38322 None:intergenic 20.0%
!! AATTAACAATTAATGAACAG+AGG - tig0012204:38382-38401 None:intergenic 20.0%
!!! TAACGGTTTTATTATTAACT+AGG + tig0012204:38658-38677 Msa1351380:intron 20.0%
!!! AACGGTTTTATTATTAACTA+GGG + tig0012204:38659-38678 Msa1351380:intron 20.0%
!! AAGATAATATAGGGTTTAAT+AGG + tig0012204:39186-39205 Msa1351380:intron 20.0%
!!! CATATTTTACCAATTTTACA+TGG - tig0012204:39219-39238 None:intergenic 20.0%
!!! AACATTTTCCCAATTTTTAT+AGG + tig0012204:39392-39411 Msa1351380:intron 20.0%
!! TTAACGTTCCTATAAAAATT+GGG - tig0012204:39403-39422 None:intergenic 20.0%
!! ATTAACGTTCCTATAAAAAT+TGG - tig0012204:39404-39423 None:intergenic 20.0%
!!! GTGTTTAAATTTTATTTAGC+AGG - tig0012204:39446-39465 None:intergenic 20.0%
!!! ATAGTCCTATAAATTTTAGA+GGG - tig0012204:39598-39617 None:intergenic 20.0%
!!! AATAGTCCTATAAATTTTAG+AGG - tig0012204:39599-39618 None:intergenic 20.0%
!! CTTTATAAAGATAAATTTCG+TGG + tig0012204:39734-39753 Msa1351380:CDS 20.0%
!! ATCTTATATTGAATAATTGC+AGG + tig0012204:39821-39840 Msa1351380:intron 20.0%
!! TCTTATATTGAATAATTGCA+GGG + tig0012204:39822-39841 Msa1351380:intron 20.0%
!! TTATAAATTTCATTAACAGG+TGG + tig0012204:40343-40362 Msa1351380:intron 20.0%
!!! TTTTATATATAAGCATCCTT+TGG + tig0012204:40452-40471 Msa1351380:intron 20.0%
!!! AACTTTTATCAAATTTTGAC+AGG + tig0012204:40597-40616 Msa1351380:intron 20.0%
!! TGGAGAAAATAAAAATATCA+TGG + tig0012204:41337-41356 Msa1351380:three_prime_UTR 20.0%
! TTAGATATGGAAAGAGAAAA+AGG - tig0012204:32895-32914 None:intergenic 25.0%
! ACAGTAAGAATATAGAAAAG+AGG - tig0012204:33441-33460 None:intergenic 25.0%
! GCAAAAGAATTTCAATAACA+TGG - tig0012204:33484-33503 None:intergenic 25.0%
!!! TCATCATCTAAAATTTGTTG+TGG - tig0012204:33609-33628 None:intergenic 25.0%
!!! TTTTAAGTGTATGTTTCCAT+GGG + tig0012204:33694-33713 Msa1351380:intron 25.0%
! CAATAATATGATCTTAGGAT+TGG - tig0012204:34019-34038 None:intergenic 25.0%
! ATGTAACAAAAACAATGTTG+CGG - tig0012204:34328-34347 None:intergenic 25.0%
! CAAAGCAAAATACATTGATA+GGG - tig0012204:34514-34533 None:intergenic 25.0%
!!! AATATTACTTCTAGCTTTGA+TGG + tig0012204:34805-34824 Msa1351380:intron 25.0%
! AAAAAATTGTATCTCGTCAA+TGG - tig0012204:35058-35077 None:intergenic 25.0%
!!! CTTGCAATTTGCTATTTATT+TGG + tig0012204:35173-35192 Msa1351380:intron 25.0%
! ATGTATTTGGAAATAAGGAA+AGG - tig0012204:35207-35226 None:intergenic 25.0%
! AGTGAAAAAAAAGCTCATTT+GGG - tig0012204:35513-35532 None:intergenic 25.0%
! TAGTGAAAAAAAAGCTCATT+TGG - tig0012204:35514-35533 None:intergenic 25.0%
!!! AGAGTATTTATTTCTATCAC+AGG - tig0012204:35615-35634 None:intergenic 25.0%
! GCTTAGATAAAAATATTTCG+TGG - tig0012204:35868-35887 None:intergenic 25.0%
! GAACTCAAAAAATGTATTGA+GGG - tig0012204:35904-35923 None:intergenic 25.0%
! TTCAAAATAAATCCAACCTA+GGG - tig0012204:36039-36058 None:intergenic 25.0%
! TAATCCAATTCAATGTGAAA+AGG - tig0012204:36095-36114 None:intergenic 25.0%
! TATATAGAAATATGATGACC+GGG + tig0012204:36732-36751 Msa1351380:intron 25.0%
!!! TAATTATATGCCTTTTGACT+TGG - tig0012204:36798-36817 None:intergenic 25.0%
!!! TTATCATGTGGCTATTTTTA+TGG - tig0012204:36846-36865 None:intergenic 25.0%
!!! TGAAAAATGGTTTTATCATG+TGG - tig0012204:36858-36877 None:intergenic 25.0%
!! CATATTTTCTCACTGAAAAA+TGG - tig0012204:36871-36890 None:intergenic 25.0%
!!! CATTTTTCAGTGAGAAAATA+TGG + tig0012204:36869-36888 Msa1351380:intron 25.0%
! CTAAACAATTTAAAGATGTG+AGG - tig0012204:37111-37130 None:intergenic 25.0%
! AATTGATGTGTAATTGTGTT+AGG + tig0012204:37159-37178 Msa1351380:intron 25.0%
! ATTGATGTGTAATTGTGTTA+GGG + tig0012204:37160-37179 Msa1351380:intron 25.0%
! AAATTGCTATATGTAATTGC+AGG - tig0012204:37193-37212 None:intergenic 25.0%
! TGCAATTACATATAGCAATT+TGG + tig0012204:37192-37211 Msa1351380:CDS 25.0%
! GCAATTACATATAGCAATTT+GGG + tig0012204:37193-37212 Msa1351380:CDS 25.0%
! CAATTACATATAGCAATTTG+GGG + tig0012204:37194-37213 Msa1351380:CDS 25.0%
! TGCTTGAATAGATAAAAGAA+CGG - tig0012204:37390-37409 None:intergenic 25.0%
!! TCTTTTATCTATTCAAGCAT+TGG + tig0012204:37391-37410 Msa1351380:intron 25.0%
!! CTTTTATCTATTCAAGCATT+GGG + tig0012204:37392-37411 Msa1351380:intron 25.0%
!!! TTTTATCTATTCAAGCATTG+GGG + tig0012204:37393-37412 Msa1351380:intron 25.0%
!! TGATACAAGCTTTTAACAAT+TGG - tig0012204:37492-37511 None:intergenic 25.0%
!!! TAAAATGGAGGATTTTAGAA+GGG - tig0012204:37607-37626 None:intergenic 25.0%
!! TTAAAATGGAGGATTTTAGA+AGG - tig0012204:37608-37627 None:intergenic 25.0%
!! TGATACAAGCTTTTAACAAT+TGG - tig0012204:37492-37511 None:intergenic 25.0%
! ATGTATGAACAAGAAAACTA+AGG - tig0012204:38027-38046 None:intergenic 25.0%
!!! AGTTTTAGATCATATTTGGT+TGG + tig0012204:38151-38170 Msa1351380:intron 25.0%
!!! AGTAGGTTAACTTTGAAATT+AGG + tig0012204:38240-38259 Msa1351380:intron 25.0%
!! GTTAATGTTAATGGATGAAT+TGG + tig0012204:38488-38507 Msa1351380:intron 25.0%
!! TTTCATAAATACGTTTGTTG+TGG + tig0012204:39101-39120 Msa1351380:intron 25.0%
! TTGGGGTATAAGATAATATA+GGG + tig0012204:39177-39196 Msa1351380:intron 25.0%
!! GTTCATAATCTTGTGTTTTA+AGG + tig0012204:39333-39352 Msa1351380:intron 25.0%
! ATCAAAAATGATCATTTACC+TGG - tig0012204:39524-39543 None:intergenic 25.0%
!!! AATGATCATTTTTGATCATG+TGG + tig0012204:39528-39547 Msa1351380:intron 25.0%
!!! AGGACTATTTGTTGTATTAT+TGG + tig0012204:39610-39629 Msa1351380:intron 25.0%
! ATAAAGATAAATTTCGTGGT+TGG + tig0012204:39738-39757 Msa1351380:CDS 25.0%
! TAAAGATAAATTTCGTGGTT+GGG + tig0012204:39739-39758 Msa1351380:CDS 25.0%
!!! CAAAATTTTAATCCATTTGC+TGG + tig0012204:40148-40167 Msa1351380:CDS 25.0%
! TTTGAATGAACAAGAAATGA+CGG - tig0012204:40424-40443 None:intergenic 25.0%
! GTGTTCATTATATGTTTGAA+TGG - tig0012204:40635-40654 None:intergenic 25.0%
!!! TTTTTTACTACCATTTGTTG+AGG + tig0012204:40965-40984 Msa1351380:three_prime_UTR 25.0%
!!! TTTTTACTACCATTTGTTGA+GGG + tig0012204:40966-40985 Msa1351380:three_prime_UTR 25.0%
! ATATTATATCTTACCCTTGT+TGG + tig0012204:40995-41014 Msa1351380:three_prime_UTR 25.0%
! TATTATATCTTACCCTTGTT+GGG + tig0012204:40996-41015 Msa1351380:three_prime_UTR 25.0%
! AGTTACAAAAAATTTCCACA+GGG - tig0012204:41064-41083 None:intergenic 25.0%
! TAGTTACAAAAAATTTCCAC+AGG - tig0012204:41065-41084 None:intergenic 25.0%
! AGATGGAAATAATGAAAAGA+TGG + tig0012204:41304-41323 Msa1351380:three_prime_UTR 25.0%
CTCTTTCCATATCTAATTCA+TGG + tig0012204:32899-32918 Msa1351380:five_prime_UTR 30.0%
GATCAACCATGAATTAGATA+TGG - tig0012204:32908-32927 None:intergenic 30.0%
TGATCATCTTCAAAGGAAAT+AGG - tig0012204:33301-33320 None:intergenic 30.0%
TCTATCTTGATCATCTTCAA+AGG - tig0012204:33308-33327 None:intergenic 30.0%
TTTGAAGATGATCAAGATAG+AGG + tig0012204:33307-33326 Msa1351380:CDS 30.0%
!! ATCTAAAATTTGTTGTGGCA+GGG - tig0012204:33604-33623 None:intergenic 30.0%
!! GTTTTAAGTGTATGTTTCCA+TGG + tig0012204:33693-33712 Msa1351380:intron 30.0%
! GAAGCATCAACAAAAAATCA+TGG - tig0012204:33754-33773 None:intergenic 30.0%
!! CACAATTTTGGTAAAAGCTA+TGG - tig0012204:33780-33799 None:intergenic 30.0%
! CATAGCTTTTACCAAAATTG+TGG + tig0012204:33778-33797 Msa1351380:intron 30.0%
TTATTGTTACAGGAGTGATA+AGG + tig0012204:34033-34052 Msa1351380:intron 30.0%
TGTAACAAAAACAATGTTGC+GGG - tig0012204:34327-34346 None:intergenic 30.0%
ACTAGAAAACTTACTATCAG+CGG - tig0012204:34474-34493 None:intergenic 30.0%
CCAAAGCAAAATACATTGAT+AGG - tig0012204:34515-34534 None:intergenic 30.0%
! CCTATCAATGTATTTTGCTT+TGG + tig0012204:34512-34531 Msa1351380:CDS 30.0%
! ATCAATGTATTTTGCTTTGG+AGG + tig0012204:34515-34534 Msa1351380:CDS 30.0%
! TTTTTCCATGAGTATAGAGA+AGG + tig0012204:34554-34573 Msa1351380:CDS 30.0%
!! TGTTCTGAATCACTGTTTTT+AGG + tig0012204:34701-34720 Msa1351380:intron 30.0%
!!! TCACTGTTTTTAGGTATTTG+TGG + tig0012204:34710-34729 Msa1351380:intron 30.0%
AATTTGACAGATATCTTGCT+TGG - tig0012204:35081-35100 None:intergenic 30.0%
! TAAAGCTTCTTGTGATTTGT+TGG + tig0012204:35280-35299 Msa1351380:intron 30.0%
!! AAAGCTTCTTGTGATTTGTT+GGG + tig0012204:35281-35300 Msa1351380:intron 30.0%
!! AACAAATGGATTAACTTACC+TGG - tig0012204:35417-35436 None:intergenic 30.0%
TCTAATTTATAGAATGTGGC+TGG - tig0012204:35575-35594 None:intergenic 30.0%
ATGCCAACAACAAATAATCA+AGG + tig0012204:35675-35694 Msa1351380:intron 30.0%
CAAAATCACTCTCTCAAATA+AGG - tig0012204:35793-35812 None:intergenic 30.0%
TCAAAAAATGTATTGAGGGA+GGG - tig0012204:35900-35919 None:intergenic 30.0%
GGAACTCAAAAAATGTATTG+AGG - tig0012204:35905-35924 None:intergenic 30.0%
CTTCAAAATAAATCCAACCT+AGG - tig0012204:36040-36059 None:intergenic 30.0%
TTATATGCTACTGAACAGTA+TGG + tig0012204:36166-36185 Msa1351380:intron 30.0%
TATATGCTACTGAACAGTAT+GGG + tig0012204:36167-36186 Msa1351380:intron 30.0%
AACATTATTCATCCTCTTTG+TGG - tig0012204:36220-36239 None:intergenic 30.0%
AGAAACAATGCAAGTATTTG+TGG + tig0012204:36290-36309 Msa1351380:intron 30.0%
AGTAAACTCATCTGTCATTA+AGG + tig0012204:36397-36416 Msa1351380:intron 30.0%
CAGTTCGTTACTTAAATTTG+CGG - tig0012204:36446-36465 None:intergenic 30.0%
!! CTTGAATTTGTTATGAACAC+AGG + tig0012204:36623-36642 Msa1351380:intron 30.0%
GAATATGTGCCAGTTTATAT+TGG - tig0012204:36824-36843 None:intergenic 30.0%
TAAGTAAGAAAACCAAGTCA+AGG + tig0012204:36907-36926 Msa1351380:intron 30.0%
AAAATAAGCTAACCTTGACT+TGG - tig0012204:36922-36941 None:intergenic 30.0%
!!! AAGTCAAGGTTAGCTTATTT+TGG + tig0012204:36921-36940 Msa1351380:intron 30.0%
!!! AGTCAAGGTTAGCTTATTTT+GGG + tig0012204:36922-36941 Msa1351380:intron 30.0%
!! TATTTTGGGAATGATAAACG+TGG + tig0012204:36936-36955 Msa1351380:intron 30.0%
AGTTGTTACAAATGCTTAGA+TGG + tig0012204:37073-37092 Msa1351380:intron 30.0%
! GAAGCTGTCAATTTTCTAAA+AGG + tig0012204:37292-37311 Msa1351380:CDS 30.0%
GCTTGAATAGATAAAAGAAC+GGG - tig0012204:37389-37408 None:intergenic 30.0%
! ACAAGCTTTTAACAATTGGT+GGG - tig0012204:37488-37507 None:intergenic 30.0%
! TACAAGCTTTTAACAATTGG+TGG - tig0012204:37489-37508 None:intergenic 30.0%
! AATTGGTGGGTGATTTAAAA+TGG - tig0012204:37475-37494 None:intergenic 30.0%
! ACAAGCTTTTAACAATTGGT+GGG - tig0012204:37488-37507 None:intergenic 30.0%
! TACAAGCTTTTAACAATTGG+TGG - tig0012204:37489-37508 None:intergenic 30.0%
!! TTGAATGGAGGATTTTAGAA+GGG - tig0012204:37754-37773 None:intergenic 30.0%
! TTTGAATGGAGGATTTTAGA+AGG - tig0012204:37755-37774 None:intergenic 30.0%
CATTCAAATATAGCCTAAGT+GGG + tig0012204:37767-37786 Msa1351380:intron 30.0%
ATTCAAATATAGCCTAAGTG+GGG + tig0012204:37768-37787 Msa1351380:intron 30.0%
AATAACACACTCATACAAAC+TGG - tig0012204:37873-37892 None:intergenic 30.0%
TTATTGTGTGGAATGCTTAA+AGG + tig0012204:37888-37907 Msa1351380:intron 30.0%
TATTGTGTGGAATGCTTAAA+GGG + tig0012204:37889-37908 Msa1351380:intron 30.0%
! TCATTTTCACCAATAGTAGT+AGG + tig0012204:38223-38242 Msa1351380:intron 30.0%
CAAAGTTAACCTACTACTAT+TGG - tig0012204:38235-38254 None:intergenic 30.0%
GCATGTTGTGTTAATGTTAA+TGG + tig0012204:38479-38498 Msa1351380:intron 30.0%
CTTAATGCTCAAACTTGTAA+CGG + tig0012204:38641-38660 Msa1351380:intron 30.0%
TATTAACTAGGGATCACAAA+TGG + tig0012204:38670-38689 Msa1351380:intron 30.0%
ATGGAATTGATGTTACTGAA+TGG + tig0012204:38689-38708 Msa1351380:CDS 30.0%
TGGAATTGATGTTACTGAAT+GGG + tig0012204:38690-38709 Msa1351380:CDS 30.0%
CAATATGTTCATCAGATGAT+GGG - tig0012204:38717-38736 None:intergenic 30.0%
AAGTTCAGCTAAAGATACAA+GGG - tig0012204:38805-38824 None:intergenic 30.0%
AAAGTTCAGCTAAAGATACA+AGG - tig0012204:38806-38825 None:intergenic 30.0%
CTTGGGGTATAAGATAATAT+AGG + tig0012204:39176-39195 Msa1351380:intron 30.0%
!! GGTTTTGATCCATGTAAAAT+TGG + tig0012204:39207-39226 Msa1351380:intron 30.0%
ATCTCTACACTTAACAAAAG+TGG + tig0012204:39273-39292 Msa1351380:intron 30.0%
!! ATGAGCCCTCTAAAATTTAT+AGG + tig0012204:39590-39609 Msa1351380:intron 30.0%
GAAAAGGGGAAAATAATTAG+AGG - tig0012204:39655-39674 None:intergenic 30.0%
! CTAATTATTTTCCCCTTTTC+AGG + tig0012204:39655-39674 Msa1351380:intron 30.0%
GAAATCCTATATATGAAGAC+TGG + tig0012204:39693-39712 Msa1351380:CDS 30.0%
TATCTCATAGAATAACTGCA+GGG + tig0012204:39780-39799 Msa1351380:CDS 30.0%
CAACAAAATCAAACATGTCA+AGG - tig0012204:40111-40130 None:intergenic 30.0%
!!! GTTTGATTTTGTTGTTCTAC+AGG + tig0012204:40117-40136 Msa1351380:intron 30.0%
!! AATTTTAATCCATTTGCTGG+AGG + tig0012204:40151-40170 Msa1351380:CDS 30.0%
! TATGTTGTTGTTCAAGAACT+TGG + tig0012204:40211-40230 Msa1351380:intron 30.0%
TTGAATGAACAAGAAATGAC+GGG - tig0012204:40423-40442 None:intergenic 30.0%
TGACACAATGAAAGATAACA+AGG - tig0012204:40561-40580 None:intergenic 30.0%
ATTGTGTCATCTTCTATTTG+TGG + tig0012204:40572-40591 Msa1351380:intron 30.0%
ATAATGAACACAAGTCTTCA+TGG + tig0012204:40644-40663 Msa1351380:CDS 30.0%
TAATGAACACAAGTCTTCAT+GGG + tig0012204:40645-40664 Msa1351380:CDS 30.0%
!! ACATATCTAGCCTTGATAAT+CGG - tig0012204:40830-40849 None:intergenic 30.0%
AGTAAAAATTAACAAGCAGC+TGG - tig0012204:40933-40952 None:intergenic 30.0%
TGTAACTATGTATGAAGCAA+TGG + tig0012204:41077-41096 Msa1351380:three_prime_UTR 30.0%
! TTCATCCTTTTCATAGTCTA+AGG + tig0012204:41163-41182 Msa1351380:three_prime_UTR 30.0%
TTGTTTGCAATTTGCATAGA+TGG + tig0012204:41287-41306 Msa1351380:three_prime_UTR 30.0%
AAATATCATGGATGTTAGCA+AGG + tig0012204:41349-41368 Msa1351380:three_prime_UTR 30.0%
!! TTTTTATTGGTAGCCTCGTA+CGG - tig0012204:32780-32799 None:intergenic 35.0%
TAGGTTTCTTGAGCTTAGAA+GGG - tig0012204:33210-33229 None:intergenic 35.0%
AGATAGATACCAGAATCATG+AGG - tig0012204:33391-33410 None:intergenic 35.0%
!! CATCTAAAATTTGTTGTGGC+AGG - tig0012204:33605-33624 None:intergenic 35.0%
! GTTATGTTAGTGTTTTCTCC+TGG + tig0012204:33671-33690 Msa1351380:intron 35.0%
GGAAACATACACTTAAAACC+AGG - tig0012204:33692-33711 None:intergenic 35.0%
! AGCTTTTACCAAAATTGTGG+TGG + tig0012204:33781-33800 Msa1351380:intron 35.0%
CAGTGAGATTGTCAGAATAA+CGG - tig0012204:33811-33830 None:intergenic 35.0%
AAGCTTGGGTATAATGCAAT+TGG + tig0012204:33908-33927 Msa1351380:intron 35.0%
AGTGAAATGCGTATTCAAAC+AGG + tig0012204:33945-33964 Msa1351380:intron 35.0%
TGATAAGGTGGTTTAATGGA+GGG + tig0012204:34048-34067 Msa1351380:intron 35.0%
! GACATAGGATTTGAGACATA+AGG + tig0012204:34070-34089 Msa1351380:intron 35.0%
!! ATTTGAGACATAAGGTATCG+TGG + tig0012204:34078-34097 Msa1351380:intron 35.0%
CAGAAACTCAAGGGAATTTA+AGG + tig0012204:34237-34256 Msa1351380:CDS 35.0%
ACGTTGAAAAACCAGAGATT+GGG + tig0012204:34267-34286 Msa1351380:CDS 35.0%
TAGGAGAGATAACCATAACA+CGG - tig0012204:34433-34452 None:intergenic 35.0%
AACCTAAACTGCAAAACCAA+AGG - tig0012204:34886-34905 None:intergenic 35.0%
TGCATACACTGAAACTAAAC+TGG - tig0012204:35010-35029 None:intergenic 35.0%
TTTGGAAATAAGGAAAGGTG+AGG - tig0012204:35202-35221 None:intergenic 35.0%
!! AAGCTTCTTGTGATTTGTTG+GGG + tig0012204:35282-35301 Msa1351380:intron 35.0%
! GATACTGTATTGCAGACTTT+TGG + tig0012204:35321-35340 Msa1351380:intron 35.0%
!! CATCAAAGTATCGTCCATAT+GGG + tig0012204:35344-35363 Msa1351380:CDS 35.0%
!! ATCAAAGTATCGTCCATATG+GGG + tig0012204:35345-35364 Msa1351380:CDS 35.0%
! GCTGGATAATTTTCAATGAG+AGG - tig0012204:35557-35576 None:intergenic 35.0%
TTTCTATCACAGGTGTTTCA+GGG - tig0012204:35605-35624 None:intergenic 35.0%
ATTTCTATCACAGGTGTTTC+AGG - tig0012204:35606-35625 None:intergenic 35.0%
!! GGTCCTTGATTATTTGTTGT+TGG - tig0012204:35681-35700 None:intergenic 35.0%
CTCAAAAAATGTATTGAGGG+AGG - tig0012204:35901-35920 None:intergenic 35.0%
!!! TTTTTGAGTTCCCCCAAATT+AGG + tig0012204:35913-35932 Msa1351380:intron 35.0%
!!! TTTTGAGTTCCCCCAAATTA+GGG + tig0012204:35914-35933 Msa1351380:intron 35.0%
TTTGGAAAAAGAGGAGTAAG+TGG - tig0012204:35991-36010 None:intergenic 35.0%
! TGGTCCTTTTCACATTGAAT+TGG + tig0012204:36088-36107 Msa1351380:intron 35.0%
TTATTTGAACACGATTCGCT+TGG + tig0012204:36112-36131 Msa1351380:intron 35.0%
AAGAAATTTGTGACGAGTTC+AGG + tig0012204:36266-36285 Msa1351380:intron 35.0%
CTATCAATCATTCCTGATCA+CGG - tig0012204:36472-36491 None:intergenic 35.0%
TTTGCGTGGATAAATCCTTA+AGG - tig0012204:36544-36563 None:intergenic 35.0%
AATATGATTCATATCGGGGA+AGG - tig0012204:36586-36605 None:intergenic 35.0%
TCCCCGATATGAATCATATT+CGG + tig0012204:36586-36605 Msa1351380:intron 35.0%
TCCGAATATGATTCATATCG+GGG - tig0012204:36590-36609 None:intergenic 35.0%
CTCCGAATATGATTCATATC+GGG - tig0012204:36591-36610 None:intergenic 35.0%
CCTCCGAATATGATTCATAT+CGG - tig0012204:36592-36611 None:intergenic 35.0%
AGTTAGTTAACCACCCATTA+TGG + tig0012204:36771-36790 Msa1351380:intron 35.0%
!!! CTTTTGACTTGGTCCATAAT+GGG - tig0012204:36787-36806 None:intergenic 35.0%
AATGCTTAGATGGTATACCT+TGG + tig0012204:37083-37102 Msa1351380:intron 35.0%
! TTTAAAGATGTGAGGTACCA+AGG - tig0012204:37103-37122 None:intergenic 35.0%
TAGATTGAGTATCCACTATG+AGG - tig0012204:37450-37469 None:intergenic 35.0%
CTTAGGCTATATTTGAATGG+AGG - tig0012204:37766-37785 None:intergenic 35.0%
CCACTTAGGCTATATTTGAA+TGG - tig0012204:37769-37788 None:intergenic 35.0%
CCATTCAAATATAGCCTAAG+TGG + tig0012204:37766-37785 Msa1351380:intron 35.0%
!!! GTTTTGGAGTCTTTTAAGCA+GGG + tig0012204:37790-37809 Msa1351380:intron 35.0%
!!! TTTTGGAGTCTTTTAAGCAG+GGG + tig0012204:37791-37810 Msa1351380:intron 35.0%
! TGTATGAGTGTGTTATTGTG+TGG + tig0012204:37876-37895 Msa1351380:intron 35.0%
!! GATAGAAAGAGTATTCTGAG+CGG + tig0012204:37989-38008 Msa1351380:CDS 35.0%
! ATATTTGGTTGGTGTGTTTG+TGG + tig0012204:38162-38181 Msa1351380:intron 35.0%
TTGATAAGAACTGGATCAGA+AGG - tig0012204:38294-38313 None:intergenic 35.0%
TATGTTGTGTTCATGTGAAG+TGG + tig0012204:38404-38423 Msa1351380:intron 35.0%
TGAATTGGTCATAAGTGTAG+TGG + tig0012204:38503-38522 Msa1351380:intron 35.0%
ACAGATTAAATTGCCTAGTC+TGG + tig0012204:38554-38573 Msa1351380:intron 35.0%
! ACTTTGAAAAATGCCAGACT+AGG - tig0012204:38570-38589 None:intergenic 35.0%
!! CTGGCATTTTTCAAAGTTGA+TGG + tig0012204:38573-38592 Msa1351380:intron 35.0%
!!! GCATTTTTCAAAGTTGATGG+AGG + tig0012204:38576-38595 Msa1351380:intron 35.0%
! GTTGATGGAGGATAATTGTT+AGG + tig0012204:38588-38607 Msa1351380:intron 35.0%
CGTTACAAGTTTGAGCATTA+AGG - tig0012204:38643-38662 None:intergenic 35.0%
GCAATATGTTCATCAGATGA+TGG - tig0012204:38718-38737 None:intergenic 35.0%
TTTACCCTAACTTTCTGCAA+TGG + tig0012204:38827-38846 Msa1351380:intron 35.0%
AACTTGTAGATTGGATTCGT+TGG + tig0012204:38981-39000 Msa1351380:intron 35.0%
GAATCAAGTCAATACCTTTC+TGG - tig0012204:39019-39038 None:intergenic 35.0%
GTGGCAAATAATTAAGTCCT+TGG + tig0012204:39120-39139 Msa1351380:intron 35.0%
TAATTAAGTCCTTGGATTCC+TGG + tig0012204:39128-39147 Msa1351380:intron 35.0%
AACCAAGCATTACCTGAAAA+GGG - tig0012204:39670-39689 None:intergenic 35.0%
!!! TTTTCAGGTAATGCTTGGTT+CGG + tig0012204:39670-39689 Msa1351380:intron 35.0%
CTCATCCAGTCTTCATATAT+AGG - tig0012204:39701-39720 None:intergenic 35.0%
GCAGTTATTCTATGAGATAC+TGG - tig0012204:39779-39798 None:intergenic 35.0%
GTATCTCATAGAATAACTGC+AGG + tig0012204:39779-39798 Msa1351380:CDS 35.0%
! TACAACTGATTTAGTCCACA+CGG - tig0012204:39986-40005 None:intergenic 35.0%
CAGTTGTATGCAATGAGATA+TGG + tig0012204:39998-40017 Msa1351380:CDS 35.0%
ATACCAGTAGTTCATGAAAC+AGG + tig0012204:40025-40044 Msa1351380:CDS 35.0%
TACCAGTAGTTCATGAAACA+GGG + tig0012204:40026-40045 Msa1351380:CDS 35.0%
GCGACAATTGAATACTTGAA+CGG - tig0012204:40246-40265 None:intergenic 35.0%
! AATAGAGTTGTAAGGCACTA+AGG - tig0012204:40284-40303 None:intergenic 35.0%
!! AATGATTTGCTCGTATTGAG+CGG - tig0012204:40722-40741 None:intergenic 35.0%
AATACGAGCAAATCATTGAG+TGG + tig0012204:40725-40744 Msa1351380:CDS 35.0%
ATACGAGCAAATCATTGAGT+GGG + tig0012204:40726-40745 Msa1351380:CDS 35.0%
CATATCTGCTTTCAGCAATA+GGG - tig0012204:40766-40785 None:intergenic 35.0%
TCATATCTGCTTTCAGCAAT+AGG - tig0012204:40767-40786 None:intergenic 35.0%
! AGTTTTTCCTCCGATTATCA+AGG + tig0012204:40817-40836 Msa1351380:three_prime_UTR 35.0%
TGTCTATAGTAGTGTGTGTG+TGG - tig0012204:32982-33001 None:intergenic 40.0%
CTATACGAAAGAAGGAAGGA+AGG - tig0012204:33070-33089 None:intergenic 40.0%
GAGACTATACGAAAGAAGGA+AGG - tig0012204:33074-33093 None:intergenic 40.0%
CCATGAGACTATACGAAAGA+AGG - tig0012204:33078-33097 None:intergenic 40.0%
CCTTCTTTCGTATAGTCTCA+TGG + tig0012204:33075-33094 Msa1351380:exon 40.0%
! TATGATGGAGAAAGAGACGA+GGG - tig0012204:33114-33133 None:intergenic 40.0%
TAAGAATCGTGAGGAACTGT+TGG - tig0012204:33173-33192 None:intergenic 40.0%
TTAGAAGGGAAAGCCAATTG+CGG - tig0012204:33196-33215 None:intergenic 40.0%
GTAGGTTTCTTGAGCTTAGA+AGG - tig0012204:33211-33230 None:intergenic 40.0%
! TCCAGAGAGATTGACGATTT+TGG + tig0012204:33340-33359 Msa1351380:CDS 40.0%
ACCAAAATCGTCAATCTCTC+TGG - tig0012204:33344-33363 None:intergenic 40.0%
TTGTTACAGGAGTGATAAGG+TGG + tig0012204:34036-34055 Msa1351380:intron 40.0%
GGAGTGATAAGGTGGTTTAA+TGG + tig0012204:34044-34063 Msa1351380:intron 40.0%
GTGATAAGGTGGTTTAATGG+AGG + tig0012204:34047-34066 Msa1351380:intron 40.0%
AGACAACTGCAGAAACTCAA+GGG + tig0012204:34228-34247 Msa1351380:CDS 40.0%
GACGTTGAAAAACCAGAGAT+TGG + tig0012204:34266-34285 Msa1351380:CDS 40.0%
AAGAACCACAAACATCTGCA+AGG - tig0012204:34382-34401 None:intergenic 40.0%
ATCTCTCCTAGATACGTACA+TGG + tig0012204:34443-34462 Msa1351380:CDS 40.0%
CAACACCTTCTCTATACTCA+TGG - tig0012204:34562-34581 None:intergenic 40.0%
!! AGTATAGAGAAGGTGTTGAC+TGG + tig0012204:34564-34583 Msa1351380:CDS 40.0%
!! GTATAGAGAAGGTGTTGACT+GGG + tig0012204:34565-34584 Msa1351380:CDS 40.0%
AATCCTTATGGAGACAAGCA+CGG + tig0012204:34759-34778 Msa1351380:CDS 40.0%
!!! CTCCTTTGGTTTTGCAGTTT+AGG + tig0012204:34881-34900 Msa1351380:intron 40.0%
GCCTATTCCTCGTTAATGAT+TGG + tig0012204:34980-34999 Msa1351380:CDS 40.0%
GCCAATCATTAACGAGGAAT+AGG - tig0012204:34984-35003 None:intergenic 40.0%
GGAGTCATTGGAAGCAATAT+AGG - tig0012204:35146-35165 None:intergenic 40.0%
TAGCAAATTGCAAGACTGCA+GGG - tig0012204:35167-35186 None:intergenic 40.0%
ATAGCAAATTGCAAGACTGC+AGG - tig0012204:35168-35187 None:intergenic 40.0%
TAAGCTTCCTCAGTGTTATG+TGG + tig0012204:35234-35253 Msa1351380:intron 40.0%
AAGCTTCCTCAGTGTTATGT+GGG + tig0012204:35235-35254 Msa1351380:intron 40.0%
TGAAAACCCACATAACACTG+AGG - tig0012204:35244-35263 None:intergenic 40.0%
!! GTGATTTGTTGGGGTTGATA+CGG + tig0012204:35291-35310 Msa1351380:intron 40.0%
!! GCATCAAAGTATCGTCCATA+TGG + tig0012204:35343-35362 Msa1351380:CDS 40.0%
TCGTCCATATGGGGTATATA+AGG + tig0012204:35354-35373 Msa1351380:CDS 40.0%
GCATCCTTATATACCCCATA+TGG - tig0012204:35361-35380 None:intergenic 40.0%
GATTCACAATATTGCACACC+AGG + tig0012204:35396-35415 Msa1351380:CDS 40.0%
!!! GTTTTTTTGGCAGTGTTGCT+AGG + tig0012204:35447-35466 Msa1351380:intron 40.0%
AAAGCTCATTTGGGAAAGAG+TGG - tig0012204:35504-35523 None:intergenic 40.0%
ATTTGGGAGTTTGGAGAGTA+GGG + tig0012204:35716-35735 Msa1351380:intron 40.0%
! TTTGAGTTCCCCCAAATTAG+GGG + tig0012204:35915-35934 Msa1351380:intron 40.0%
AGCCAAAATCCCCCTAATTT+GGG - tig0012204:35928-35947 None:intergenic 40.0%
AAGCCAAAATCCCCCTAATT+TGG - tig0012204:35929-35948 None:intergenic 40.0%
! AATAGAGGGCAATGCCTTTT+GGG - tig0012204:35964-35983 None:intergenic 40.0%
GAGTAAGTGGAAGGAATAGA+GGG - tig0012204:35978-35997 None:intergenic 40.0%
GAAAAAGAGGAGTAAGTGGA+AGG - tig0012204:35987-36006 None:intergenic 40.0%
TGATCTGTAATGCCACAAAG+AGG + tig0012204:36205-36224 Msa1351380:intron 40.0%
! TGATTGATAGCCTGCAAGAA+TGG + tig0012204:36482-36501 Msa1351380:intron 40.0%
TGTAACGTTTCCATTCTTGC+AGG - tig0012204:36495-36514 None:intergenic 40.0%
GAAACGTTACACAAAACCTG+AGG + tig0012204:36504-36523 Msa1351380:intron 40.0%
CCGATATGAATCATATTCGG+AGG + tig0012204:36589-36608 Msa1351380:intron 40.0%
CTTCGTTTACTCACAAAACC+CGG - tig0012204:36753-36772 None:intergenic 40.0%
!!! CCTTTTGACTTGGTCCATAA+TGG - tig0012204:36788-36807 None:intergenic 40.0%
CCATTATGGACCAAGTCAAA+AGG + tig0012204:36785-36804 Msa1351380:intron 40.0%
TGTGTAATTGTGTTAGGGAG+TGG + tig0012204:37165-37184 Msa1351380:intron 40.0%
TATCCGATCAGCAGTAACAA+TGG - tig0012204:37320-37339 None:intergenic 40.0%
TCGGATAGTAACAGTAAGCA+AGG + tig0012204:37333-37352 Msa1351380:CDS 40.0%
TTTCTTTCCGTTCCTCATAG+TGG + tig0012204:37435-37454 Msa1351380:intron 40.0%
TGAGTATCCACTATGAGGAA+CGG - tig0012204:37445-37464 None:intergenic 40.0%
!! ATGGAGGATTTTAGAAGGGA+GGG - tig0012204:37603-37622 None:intergenic 40.0%
!! AATGGAGGATTTTAGAAGGG+AGG - tig0012204:37604-37623 None:intergenic 40.0%
! TGGTGGGTGATTTAAAATGG+AGG - tig0012204:37619-37638 None:intergenic 40.0%
!! ATGGAGGATTTTAGAAGGGA+GGG - tig0012204:37603-37622 None:intergenic 40.0%
!! AATGGAGGATTTTAGAAGGG+AGG - tig0012204:37604-37623 None:intergenic 40.0%
! ATATAGCCTAAGTGGGGTTT+TGG + tig0012204:37774-37793 Msa1351380:intron 40.0%
!!! GGTTTTGGAGTCTTTTAAGC+AGG + tig0012204:37789-37808 Msa1351380:intron 40.0%
!! TTTGGAGTCTTTTAAGCAGG+GGG + tig0012204:37792-37811 Msa1351380:intron 40.0%
TTGGGAGATAACAACTACAG+AGG + tig0012204:37937-37956 Msa1351380:CDS 40.0%
TGGGAGATAACAACTACAGA+GGG + tig0012204:37938-37957 Msa1351380:CDS 40.0%
! AGACGAGCATTTTCACTGAA+GGG - tig0012204:38124-38143 None:intergenic 40.0%
AAGAACTGGATCAGAAGGAA+TGG - tig0012204:38289-38308 None:intergenic 40.0%
CTGTCCATTGCAGAAAGTTA+GGG - tig0012204:38834-38853 None:intergenic 40.0%
ATGTAAGATTGCCTTGCAGA+AGG + tig0012204:38859-38878 Msa1351380:CDS 40.0%
GTGAGCTCATGTTATCTACT+GGG + tig0012204:38917-38936 Msa1351380:intron 40.0%
! ACTCTTTCTTGTATTGACCG+TGG + tig0012204:38954-38973 Msa1351380:intron 40.0%
CAATCTACAAGTTTCAGCCA+CGG - tig0012204:38974-38993 None:intergenic 40.0%
GGAAGACTTGATTACCAGAA+AGG + tig0012204:39002-39021 Msa1351380:CDS 40.0%
AGAGATCACAGATTGCAGAT+AGG - tig0012204:39156-39175 None:intergenic 40.0%
TGCAATCTGTGATCTCTCTT+GGG + tig0012204:39159-39178 Msa1351380:intron 40.0%
AAGATTATGAACTGACAGCC+CGG - tig0012204:39325-39344 None:intergenic 40.0%
TACTTACCAGTAACAAGTCC+AGG + tig0012204:39503-39522 Msa1351380:intron 40.0%
!! CATTTACCTGGACTTGTTAC+TGG - tig0012204:39512-39531 None:intergenic 40.0%
ACCAAGCATTACCTGAAAAG+GGG - tig0012204:39669-39688 None:intergenic 40.0%
GAACCAAGCATTACCTGAAA+AGG - tig0012204:39671-39690 None:intergenic 40.0%
! TTTCAGGTAATGCTTGGTTC+GGG + tig0012204:39671-39690 Msa1351380:intron 40.0%
GATAAATTTCGTGGTTGGGT+TGG + tig0012204:39743-39762 Msa1351380:CDS 40.0%
ACCAGTAGTTCATGAAACAG+GGG + tig0012204:40027-40046 Msa1351380:CDS 40.0%
GCTTGGACAATAGAGTTGTA+AGG - tig0012204:40292-40311 None:intergenic 40.0%
AACATTCTCTCCTTTGTCAG+TGG - tig0012204:40378-40397 None:intergenic 40.0%
GACAAAGGAGAGAATGTTAG+TGG + tig0012204:40380-40399 Msa1351380:CDS 40.0%
!! AAATATGAAGGCGCTACCAA+AGG - tig0012204:40471-40490 None:intergenic 40.0%
TATGACGAGAGATTACACCT+GGG + tig0012204:40687-40706 Msa1351380:CDS 40.0%
AATCATTGAGTGGGCATTCA+TGG + tig0012204:40735-40754 Msa1351380:CDS 40.0%
!! TATCTAGCCTTGATAATCGG+AGG - tig0012204:40827-40846 None:intergenic 40.0%
TCAAATGAGGCAGAGAAAGA+AGG - tig0012204:40908-40927 None:intergenic 40.0%
TATGTGCAACCCTCAACAAA+TGG - tig0012204:40978-40997 None:intergenic 40.0%
GAATACATACAGCCCAACAA+GGG - tig0012204:41011-41030 None:intergenic 40.0%
AGAATACATACAGCCCAACA+AGG - tig0012204:41012-41031 None:intergenic 40.0%
AAATTTCCACAGGGACTACT+TGG - tig0012204:41055-41074 None:intergenic 40.0%
! ACACAAGCTTGAGCTTTGAT+TGG + tig0012204:41113-41132 Msa1351380:three_prime_UTR 40.0%
CTCGTCCTTAGACTATGAAA+AGG - tig0012204:41171-41190 None:intergenic 40.0%
TATCATGGATGTTAGCAAGG+AGG + tig0012204:41352-41371 Msa1351380:three_prime_UTR 40.0%
ATCATGGATGTTAGCAAGGA+GGG + tig0012204:41353-41372 Msa1351380:three_prime_UTR 40.0%
ATGTGATCCGTGCATTCTGT+TGG + tig0012204:32935-32954 Msa1351380:five_prime_UTR 45.0%
TACACAGCCAACAGAATGCA+CGG - tig0012204:32945-32964 None:intergenic 45.0%
AAGACCAATGCAGGAGGAAA+GGG - tig0012204:33047-33066 None:intergenic 45.0%
! GTATGATGGAGAAAGAGACG+AGG - tig0012204:33115-33134 None:intergenic 45.0%
TTGGTATGAGAAGGTCGAGT+TGG - tig0012204:33154-33173 None:intergenic 45.0%
GAGGAACTGTTGGTATGAGA+AGG - tig0012204:33163-33182 None:intergenic 45.0%
CAATTGCGGTAAGAATCGTG+AGG - tig0012204:33182-33201 None:intergenic 45.0%
CTCACGATTCTTACCGCAAT+TGG + tig0012204:33180-33199 Msa1351380:CDS 45.0%
! AGAACGCAAGGTGGCATTTT+TGG - tig0012204:33233-33252 None:intergenic 45.0%
TCTATTTCCGGTGACACTGA+CGG + tig0012204:33250-33269 Msa1351380:CDS 45.0%
TCAAAGGAAATAGGTCCGTC+TGG - tig0012204:33292-33311 None:intergenic 45.0%
ATCATGAGGAGTCAAGCGAA+AGG - tig0012204:33377-33396 None:intergenic 45.0%
! TTTGTTGTGGCAGGGCAATT+GGG - tig0012204:33596-33615 None:intergenic 45.0%
!! ATTTGTTGTGGCAGGGCAAT+TGG - tig0012204:33597-33616 None:intergenic 45.0%
!! CAGTAGCTTTGGCGAAATCA+TGG + tig0012204:33717-33736 Msa1351380:intron 45.0%
TGGCGAAATCATGGTATCTG+TGG + tig0012204:33726-33745 Msa1351380:intron 45.0%
GATCTTAGGATTGGGTAGCT+CGG - tig0012204:34010-34029 None:intergenic 45.0%
GTGGTTTAATGGAGGGACAT+AGG + tig0012204:34055-34074 Msa1351380:intron 45.0%
GAGACAACTGCAGAAACTCA+AGG + tig0012204:34227-34246 Msa1351380:CDS 45.0%
TCTTCTGCATTCCCAATCTC+TGG - tig0012204:34281-34300 None:intergenic 45.0%
TGGGAATGCAGAAGATGAGA+AGG + tig0012204:34286-34305 Msa1351380:CDS 45.0%
AGGCCACCAGTCTTAGAATA+CGG - tig0012204:34362-34381 None:intergenic 45.0%
TGGTTCTTTGCCAATAGCAC+TGG + tig0012204:34394-34413 Msa1351380:CDS 45.0%
! TTCTTTGCCAATAGCACTGG+CGG + tig0012204:34397-34416 Msa1351380:CDS 45.0%
GCAGTACCATGTACGTATCT+AGG - tig0012204:34452-34471 None:intergenic 45.0%
ACCCTTCATTCCATAGACCA+GGG + tig0012204:34736-34755 Msa1351380:CDS 45.0%
TCCCTGGTCTATGGAATGAA+GGG - tig0012204:34740-34759 None:intergenic 45.0%
TTCCCTGGTCTATGGAATGA+AGG - tig0012204:34741-34760 None:intergenic 45.0%
CATAAGGATTCCCTGGTCTA+TGG - tig0012204:34749-34768 None:intergenic 45.0%
CATAGACCAGGGAATCCTTA+TGG + tig0012204:34747-34766 Msa1351380:CDS 45.0%
TTGTCTCCATAAGGATTCCC+TGG - tig0012204:34756-34775 None:intergenic 45.0%
ATCCTTATGGAGACAAGCAC+GGG + tig0012204:34760-34779 Msa1351380:CDS 45.0%
CGGGACGTTTAAGGATAATC+AGG + tig0012204:34779-34798 Msa1351380:CDS 45.0%
AGCACCATTAGTGCTTCCAT+TGG + tig0012204:34933-34952 Msa1351380:CDS 45.0%
GCACCATTAGTGCTTCCATT+GGG + tig0012204:34934-34953 Msa1351380:CDS 45.0%
CATTAGTGCTTCCATTGGGA+GGG + tig0012204:34938-34957 Msa1351380:CDS 45.0%
TGGCATGCCAATCATTAACG+AGG - tig0012204:34990-35009 None:intergenic 45.0%
TAATCAAGGACCGTCCTGTT+AGG + tig0012204:35689-35708 Msa1351380:intron 45.0%
TTAGGCTCCATTTGGGAGTT+TGG + tig0012204:35707-35726 Msa1351380:intron 45.0%
CTACTCTCCAAACTCCCAAA+TGG - tig0012204:35717-35736 None:intergenic 45.0%
CATTTGGGAGTTTGGAGAGT+AGG + tig0012204:35715-35734 Msa1351380:intron 45.0%
AATGTATTGAGGGAGGGTCT+TGG - tig0012204:35894-35913 None:intergenic 45.0%
TTGAGTTCCCCCAAATTAGG+GGG + tig0012204:35916-35935 Msa1351380:intron 45.0%
CCAAAATCCCCCTAATTTGG+GGG - tig0012204:35926-35945 None:intergenic 45.0%
GCCAAAATCCCCCTAATTTG+GGG - tig0012204:35927-35946 None:intergenic 45.0%
! ATAGAGGGCAATGCCTTTTG+GGG - tig0012204:35963-35982 None:intergenic 45.0%
! GAATAGAGGGCAATGCCTTT+TGG - tig0012204:35965-35984 None:intergenic 45.0%
GGAGTAAGTGGAAGGAATAG+AGG - tig0012204:35979-35998 None:intergenic 45.0%
ATCCAACCTAGGGTCTGTTT+GGG - tig0012204:36029-36048 None:intergenic 45.0%
AATCCAACCTAGGGTCTGTT+TGG - tig0012204:36030-36049 None:intergenic 45.0%
TCAATCATTCCTGATCACGG+TGG - tig0012204:36469-36488 None:intergenic 45.0%
GAAGGACATGTTGAATCTGG+GGG - tig0012204:36568-36587 None:intergenic 45.0%
GGAAGGACATGTTGAATCTG+GGG - tig0012204:36569-36588 None:intergenic 45.0%
GGGAAGGACATGTTGAATCT+GGG - tig0012204:36570-36589 None:intergenic 45.0%
!! TTGACTTGGTCCATAATGGG+TGG - tig0012204:36784-36803 None:intergenic 45.0%
AGTGCTCCATACCATTCTTG+AGG - tig0012204:37223-37242 None:intergenic 45.0%
TCAAGAATGGTATGGAGCAC+TGG + tig0012204:37222-37241 Msa1351380:CDS 45.0%
! CAAGAATGGTATGGAGCACT+GGG + tig0012204:37223-37242 Msa1351380:CDS 45.0%
AAGACTCCAAAACCCCACTT+AGG - tig0012204:37783-37802 None:intergenic 45.0%
! GCAGGGTAACTTTCCTTTTC+AGG + tig0012204:37834-37853 Msa1351380:intron 45.0%
AGAATAGCCCTGGAAAAGGA+AGG - tig0012204:37918-37937 None:intergenic 45.0%
! TCCTTTTCCAGGGCTATTCT+TGG + tig0012204:37918-37937 Msa1351380:intron 45.0%
! CCTTTTCCAGGGCTATTCTT+GGG + tig0012204:37919-37938 Msa1351380:intron 45.0%
TTATCTCCCAAGAATAGCCC+TGG - tig0012204:37928-37947 None:intergenic 45.0%
GAGATAACAACTACAGAGGG+TGG + tig0012204:37941-37960 Msa1351380:CDS 45.0%
! ACAACTACAGAGGGTGGATT+TGG + tig0012204:37947-37966 Msa1351380:CDS 45.0%
! GAGACGAGCATTTTCACTGA+AGG - tig0012204:38125-38144 None:intergenic 45.0%
AAGTGGCTGTTTGCAGACTT+TGG + tig0012204:38421-38440 Msa1351380:intron 45.0%
AATGTCGTCGGCAGAATAGT+TGG - tig0012204:38743-38762 None:intergenic 45.0%
TATTCTGCCGACGACATTTC+TGG + tig0012204:38745-38764 Msa1351380:CDS 45.0%
ATTCTGCCGACGACATTTCT+GGG + tig0012204:38746-38765 Msa1351380:CDS 45.0%
AACCTTCCCAGAAATGTCGT+CGG - tig0012204:38755-38774 None:intergenic 45.0%
CAGCTAAAGATACAAGGGAG+AGG - tig0012204:38800-38819 None:intergenic 45.0%
CCTGTCCATTGCAGAAAGTT+AGG - tig0012204:38835-38854 None:intergenic 45.0%
CCTAACTTTCTGCAATGGAC+AGG + tig0012204:38832-38851 Msa1351380:intron 45.0%
ATTGCCTTGCAGAAGGAGTT+GGG + tig0012204:38866-38885 Msa1351380:CDS 45.0%
AGATAACATGAGCTCACCAC+TGG - tig0012204:38914-38933 None:intergenic 45.0%
GGTGAGCTCATGTTATCTAC+TGG + tig0012204:38916-38935 Msa1351380:intron 45.0%
CGTGGCTGAAACTTGTAGAT+TGG + tig0012204:38972-38991 Msa1351380:intron 45.0%
!! AGGTATTGACTTGATTCGCC+AGG + tig0012204:39022-39041 Msa1351380:CDS 45.0%
ACATCGTCTTGCATAAGCTC+TGG - tig0012204:39053-39072 None:intergenic 45.0%
AGATAGGTACCAGGAATCCA+AGG - tig0012204:39140-39159 None:intergenic 45.0%
ACAGATTGCAGATAGGTACC+AGG - tig0012204:39149-39168 None:intergenic 45.0%
CTGCAATCTGTGATCTCTCT+TGG + tig0012204:39158-39177 Msa1351380:intron 45.0%
GCAATCTGTGATCTCTCTTG+GGG + tig0012204:39160-39179 Msa1351380:intron 45.0%
AGATTATGAACTGACAGCCC+GGG - tig0012204:39324-39343 None:intergenic 45.0%
!!! TCCCCTTTTCAGGTAATGCT+TGG + tig0012204:39665-39684 Msa1351380:intron 45.0%
CCAGTAGTTCATGAAACAGG+GGG + tig0012204:40028-40047 Msa1351380:CDS 45.0%
! CTGAATCGAGTTGTTTCGCT+TGG - tig0012204:40309-40328 None:intergenic 45.0%
! GACGTTTTCTCCACTGACAA+AGG + tig0012204:40365-40384 Msa1351380:CDS 45.0%
TGAACACAAGTCTTCATGGG+AGG + tig0012204:40648-40667 Msa1351380:CDS 45.0%
GAACACAAGTCTTCATGGGA+GGG + tig0012204:40649-40668 Msa1351380:CDS 45.0%
TGGGAGGGATTGATGAAAAG+AGG + tig0012204:40664-40683 Msa1351380:CDS 45.0%
GTATGACGAGAGATTACACC+TGG + tig0012204:40686-40705 Msa1351380:CDS 45.0%
GAGAGATTACACCTGGGAAA+AGG + tig0012204:40693-40712 Msa1351380:CDS 45.0%
ATCTGCTTTCAGCAATAGGG+TGG - tig0012204:40763-40782 None:intergenic 45.0%
AATCGTGACCGAGTGATAAC+AGG + tig0012204:40875-40894 Msa1351380:three_prime_UTR 45.0%
GGGCTGTATGTATTCTACGA+TGG + tig0012204:41016-41035 Msa1351380:three_prime_UTR 45.0%
CCTTTGTGAAGCACGTGATA+CGG - tig0012204:41220-41239 None:intergenic 45.0%
! GAAAAGATGGCTTGCACAGA+TGG + tig0012204:41317-41336 Msa1351380:three_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTTGAAA+GGG - tig0012204:39468-39487 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - tig0012204:39469-39488 None:intergenic 5.0%
GAAGACCAATGCAGGAGGAA+AGG - tig0012204:33048-33067 None:intergenic 50.0%
GAAGGAAGGAAGACCAATGC+AGG - tig0012204:33056-33075 None:intergenic 50.0%
! CTGAAGAAGTGCGGGTATGA+TGG - tig0012204:33129-33148 None:intergenic 50.0%
! AGTTGGAGCTGAAGAAGTGC+GGG - tig0012204:33137-33156 None:intergenic 50.0%
GAGTTGGAGCTGAAGAAGTG+CGG - tig0012204:33138-33157 None:intergenic 50.0%
!!! CGCAAGGTGGCATTTTTGGT+AGG - tig0012204:33229-33248 None:intergenic 50.0%
GCCACCTTGCGTTCTATTTC+CGG + tig0012204:33238-33257 Msa1351380:CDS 50.0%
ACCGGAAATAGAACGCAAGG+TGG - tig0012204:33242-33261 None:intergenic 50.0%
GTCACCGGAAATAGAACGCA+AGG - tig0012204:33245-33264 None:intergenic 50.0%
CGCTTGACTCCTCATGATTC+TGG + tig0012204:33379-33398 Msa1351380:CDS 50.0%
GTTTCCATGGGCAGTAGCTT+TGG + tig0012204:33706-33725 Msa1351380:intron 50.0%
! ACGGTGAGCCACCACAATTT+TGG - tig0012204:33792-33811 None:intergenic 50.0%
!! CTTTTGAGTAGTCGCGCGTT+TGG - tig0012204:33891-33910 None:intergenic 50.0%
GCGCGACTACTCAAAAGCTT+GGG + tig0012204:33894-33913 Msa1351380:intron 50.0%
!!! AGCTCGGCTGGTTTTAGCTA+AGG - tig0012204:33994-34013 None:intergenic 50.0%
!! GCTGCACCGTATTCTAAGAC+TGG + tig0012204:34353-34372 Msa1351380:CDS 50.0%
!! GCACCGTATTCTAAGACTGG+TGG + tig0012204:34356-34375 Msa1351380:CDS 50.0%
!! TCTTTGCCAATAGCACTGGC+GGG + tig0012204:34398-34417 Msa1351380:CDS 50.0%
!! TTTGGAGGCGCTCAAGAAGT+TGG + tig0012204:34530-34549 Msa1351380:CDS 50.0%
CACCCTTCATTCCATAGACC+AGG + tig0012204:34735-34754 Msa1351380:CDS 50.0%
AGACAAGCACGGGACGTTTA+AGG + tig0012204:34770-34789 Msa1351380:CDS 50.0%
TGGTGCTTCACATGCTGCAT+GGG - tig0012204:34920-34939 None:intergenic 50.0%
ATGGTGCTTCACATGCTGCA+TGG - tig0012204:34921-34940 None:intergenic 50.0%
!! CCTCCCAATGGAAGCACTAA+TGG - tig0012204:34940-34959 None:intergenic 50.0%
CCATTAGTGCTTCCATTGGG+AGG + tig0012204:34937-34956 Msa1351380:CDS 50.0%
CCATTGGGAGGGTTCACTTA+CGG + tig0012204:34949-34968 Msa1351380:CDS 50.0%
ATGAGAGGCTGCTAAGCTGA+AGG - tig0012204:35542-35561 None:intergenic 50.0%
CCAAATGGAGCCTAACAGGA+CGG - tig0012204:35702-35721 None:intergenic 50.0%
CGTCCTGTTAGGCTCCATTT+GGG + tig0012204:35700-35719 Msa1351380:intron 50.0%
ACTCCCAAATGGAGCCTAAC+AGG - tig0012204:35706-35725 None:intergenic 50.0%
GAGTTTGGAGAGTAGGGAAG+AGG + tig0012204:35722-35741 Msa1351380:intron 50.0%
TCTGGAGGGAGAGTAAGACA+GGG + tig0012204:35747-35766 Msa1351380:intron 50.0%
AGGGAGAGTAAGACAGGGAA+AGG + tig0012204:35752-35771 Msa1351380:intron 50.0%
TATTGAGGGAGGGTCTTGGA+GGG - tig0012204:35890-35909 None:intergenic 50.0%
! CCCCCAAATTAGGGGGATTT+TGG + tig0012204:35923-35942 Msa1351380:intron 50.0%
TTACGAAGAACCCCCCCAAA+AGG + tig0012204:35947-35966 Msa1351380:intron 50.0%
! TAGAGGGCAATGCCTTTTGG+GGG - tig0012204:35962-35981 None:intergenic 50.0%
!! GGGAAGGGCTTTGGAAAAAG+AGG - tig0012204:36000-36019 None:intergenic 50.0%
TTGAATCTGGGGGATTTGCG+TGG - tig0012204:36558-36577 None:intergenic 50.0%
GGGGAAGGACATGTTGAATC+TGG - tig0012204:36571-36590 None:intergenic 50.0%
! ATTTGGGGCTGCCTCAAGAA+TGG + tig0012204:37209-37228 Msa1351380:CDS 50.0%
!! AATGGTATGGAGCACTGGGA+TGG + tig0012204:37227-37246 Msa1351380:CDS 50.0%
!! ATGGTATGGAGCACTGGGAT+GGG + tig0012204:37228-37247 Msa1351380:CDS 50.0%
TGGGATGGGTATTCCCTACT+TGG + tig0012204:37242-37261 Msa1351380:CDS 50.0%
GGGATGGGTATTCCCTACTT+GGG + tig0012204:37243-37262 Msa1351380:CDS 50.0%
AGGACACATGCTCTTGACAC+AGG + tig0012204:37268-37287 Msa1351380:CDS 50.0%
GCGCCATTGTTACTGCTGAT+CGG + tig0012204:37314-37333 Msa1351380:CDS 50.0%
! TCTTTTAAGCAGGGGGTTGC+AGG + tig0012204:37799-37818 Msa1351380:intron 50.0%
! AAGGGATGCCTTCCTTTTCC+AGG + tig0012204:37907-37926 Msa1351380:intron 50.0%
! AGGGATGCCTTCCTTTTCCA+GGG + tig0012204:37908-37927 Msa1351380:intron 50.0%
CCCAAGAATAGCCCTGGAAA+AGG - tig0012204:37922-37941 None:intergenic 50.0%
! AGAGGGTGGATTTGGTCTAC+AGG + tig0012204:37955-37974 Msa1351380:CDS 50.0%
GATTGCCTTGCAGAAGGAGT+TGG + tig0012204:38865-38884 Msa1351380:CDS 50.0%
AAGACCCAACTCCTTCTGCA+AGG - tig0012204:38873-38892 None:intergenic 50.0%
!! GCATAAGCTCTGGAATTGCC+TGG - tig0012204:39043-39062 None:intergenic 50.0%
TCCCTCATGAAGCTCTTACC+CGG + tig0012204:39303-39322 Msa1351380:intron 50.0%
CCCCCTGTTTCATGAACTAC+TGG - tig0012204:40031-40050 None:intergenic 50.0%
GCCTTCAGCATTGCATCCTT+CGG - tig0012204:40185-40204 None:intergenic 50.0%
AGGATGCAATGCTGAAGGCA+CGG + tig0012204:40186-40205 Msa1351380:CDS 50.0%
! GATTTGCTCGTATTGAGCGG+CGG - tig0012204:40719-40738 None:intergenic 50.0%
GTGACCGAGTGATAACAGGA+AGG + tig0012204:40879-40898 Msa1351380:three_prime_UTR 50.0%
ACCGAGTGATAACAGGAAGG+TGG + tig0012204:40882-40901 Msa1351380:three_prime_UTR 50.0%
GCCACCTTCCTGTTATCACT+CGG - tig0012204:40886-40905 None:intergenic 50.0%
! CAAGCAGCTGGTCTCAAATG+AGG - tig0012204:40921-40940 None:intergenic 50.0%
AATCAGCCAAGTAGTCCCTG+TGG + tig0012204:41046-41065 Msa1351380:three_prime_UTR 50.0%
GTCTAAGGACGAGCTCTCAA+CGG + tig0012204:41178-41197 Msa1351380:three_prime_UTR 50.0%
CCGTATCACGTGCTTCACAA+AGG + tig0012204:41217-41236 Msa1351380:three_prime_UTR 50.0%
GTTAGCAAGGAGGGATTTGC+TGG + tig0012204:41362-41381 Msa1351380:three_prime_UTR 50.0%
CGATCCCTTTCCTCCTGCAT+TGG + tig0012204:33040-33059 Msa1351380:five_prime_UTR 55.0%
GGAAGGAAGACCAATGCAGG+AGG - tig0012204:33053-33072 None:intergenic 55.0%
TAGGTCCGTCTGGTGAAGCA+GGG - tig0012204:33282-33301 None:intergenic 55.0%
ATAGGTCCGTCTGGTGAAGC+AGG - tig0012204:33283-33302 None:intergenic 55.0%
TTGTGGCAGGGCAATTGGGT+GGG - tig0012204:33592-33611 None:intergenic 55.0%
TTCGCCAAAGCTACTGCCCA+TGG - tig0012204:33713-33732 None:intergenic 55.0%
CGCGCGACTACTCAAAAGCT+TGG + tig0012204:33893-33912 Msa1351380:intron 55.0%
TTAGGATTGGGTAGCTCGGC+TGG - tig0012204:34006-34025 None:intergenic 55.0%
! GGTGGCCTTGCAGATGTTTG+TGG + tig0012204:34374-34393 Msa1351380:CDS 55.0%
GTCCCGTGCTTGTCTCCATA+AGG - tig0012204:34765-34784 None:intergenic 55.0%
CCGTAAGTGAACCCTCCCAA+TGG - tig0012204:34952-34971 None:intergenic 55.0%
GCAAGACTGCAGGGAGTCAT+TGG - tig0012204:35158-35177 None:intergenic 55.0%
CCGTCCTGTTAGGCTCCATT+TGG + tig0012204:35699-35718 Msa1351380:intron 55.0%
GAGAGTAGGGAAGAGGTCTC+TGG + tig0012204:35729-35748 Msa1351380:intron 55.0%
AGTAGGGAAGAGGTCTCTGG+AGG + tig0012204:35732-35751 Msa1351380:intron 55.0%
GTAGGGAAGAGGTCTCTGGA+GGG + tig0012204:35733-35752 Msa1351380:intron 55.0%
! CTCTGGAGGGAGAGTAAGAC+AGG + tig0012204:35746-35765 Msa1351380:intron 55.0%
GTATTGAGGGAGGGTCTTGG+AGG - tig0012204:35891-35910 None:intergenic 55.0%
! AGAGGGCAATGCCTTTTGGG+GGG - tig0012204:35961-35980 None:intergenic 55.0%
CTGTTTGGGAGTGGAGGGAA+GGG - tig0012204:36015-36034 None:intergenic 55.0%
TCTGTTTGGGAGTGGAGGGA+AGG - tig0012204:36016-36035 None:intergenic 55.0%
AGGGTCTGTTTGGGAGTGGA+GGG - tig0012204:36020-36039 None:intergenic 55.0%
TAGGGTCTGTTTGGGAGTGG+AGG - tig0012204:36021-36040 None:intergenic 55.0%
TCCACTCCCAAACAGACCCT+AGG + tig0012204:36020-36039 Msa1351380:intron 55.0%
ACCTAGGGTCTGTTTGGGAG+TGG - tig0012204:36024-36043 None:intergenic 55.0%
CTCCCAAACAGACCCTAGGT+TGG + tig0012204:36024-36043 Msa1351380:intron 55.0%
AACGAACTGCCACCGTGATC+AGG + tig0012204:36457-36476 Msa1351380:intron 55.0%
GCGTGTAGTCGCTGTCCTTA+AGG + tig0012204:36526-36545 Msa1351380:intron 55.0%
GGGCTGCCTCAAGAATGGTA+TGG + tig0012204:37214-37233 Msa1351380:CDS 55.0%
CATGTGTCCTCGCCCAAGTA+GGG - tig0012204:37258-37277 None:intergenic 55.0%
AAGTTACCCTGCCGAACCCT+GGG - tig0012204:37826-37845 None:intergenic 55.0%
AAAGTTACCCTGCCGAACCC+TGG - tig0012204:37827-37846 None:intergenic 55.0%
! TGCCGACGACATTTCTGGGA+AGG + tig0012204:38750-38769 Msa1351380:CDS 55.0%
ACTGGACAATCAGGTCGCAC+TGG - tig0012204:38896-38915 None:intergenic 55.0%
AGTGCGACCTGATTGTCCAG+TGG + tig0012204:38895-38914 Msa1351380:CDS 55.0%
GAGCTCACCACTGGACAATC+AGG - tig0012204:38905-38924 None:intergenic 55.0%
CCCGGGTAAGAGCTTCATGA+GGG - tig0012204:39307-39326 None:intergenic 55.0%
CCCTCATGAAGCTCTTACCC+GGG + tig0012204:39304-39323 Msa1351380:intron 55.0%
CCACACGGCTCGAATGTTGA+TGG - tig0012204:39971-39990 None:intergenic 55.0%
CCATCAACATTCGAGCCGTG+TGG + tig0012204:39968-39987 Msa1351380:CDS 55.0%
GCATCGCTTCCTCCAGCAAA+TGG - tig0012204:40163-40182 None:intergenic 55.0%
GCCGAAGGATGCAATGCTGA+AGG + tig0012204:40181-40200 Msa1351380:CDS 55.0%
! GGATGCAATGCTGAAGGCAC+GGG + tig0012204:40187-40206 Msa1351380:CDS 55.0%
! GATGCAATGCTGAAGGCACG+GGG + tig0012204:40188-40207 Msa1351380:CDS 55.0%
TAAGGACGAGCTCTCAACGG+CGG + tig0012204:41181-41200 Msa1351380:three_prime_UTR 55.0%
!! GGAAGCACCGTCAGTGTCAC+CGG - tig0012204:33260-33279 None:intergenic 60.0%
GCTTCCCCTGCTTCACCAGA+CGG + tig0012204:33274-33293 Msa1351380:CDS 60.0%
AGGTCCGTCTGGTGAAGCAG+GGG - tig0012204:33281-33300 None:intergenic 60.0%
GGCAATTGGGTGGGGACACA+AGG - tig0012204:33583-33602 None:intergenic 60.0%
TGTGGCAGGGCAATTGGGTG+GGG - tig0012204:33591-33610 None:intergenic 60.0%
GTTGTGGCAGGGCAATTGGG+TGG - tig0012204:33593-33612 None:intergenic 60.0%
!! GAGGGCAATGCCTTTTGGGG+GGG - tig0012204:35960-35979 None:intergenic 60.0%
GGGTATTCCCTACTTGGGCG+AGG + tig0012204:37248-37267 Msa1351380:CDS 60.0%
GCATGTGTCCTCGCCCAAGT+AGG - tig0012204:37259-37278 None:intergenic 60.0%
AGTTACCCTGCCGAACCCTG+GGG - tig0012204:37825-37844 None:intergenic 60.0%
GCCCGGGTAAGAGCTTCATG+AGG - tig0012204:39308-39327 None:intergenic 60.0%
ACGAGCTCTCAACGGCGGTT+AGG + tig0012204:41186-41205 Msa1351380:three_prime_UTR 60.0%
!! CCAATAGCACTGGCGGGTCG+CGG + tig0012204:34404-34423 Msa1351380:CDS 65.0%
GGGTCGCGGACACCGTGTTA+TGG + tig0012204:34418-34437 Msa1351380:CDS 65.0%
GGGAGTGGAGGGAAGGGCTT+TGG - tig0012204:36009-36028 None:intergenic 65.0%
GGACAGCGACTACACGCCTC+AGG - tig0012204:36523-36542 None:intergenic 65.0%
GCTGGAGGAAGCGATGCCGA+AGG + tig0012204:40166-40185 Msa1351380:CDS 65.0%
! TTGAGCGGCGGCCTTTTCCC+AGG - tig0012204:40707-40726 None:intergenic 65.0%
CCGCGACCCGCCAGTGCTAT+TGG - tig0012204:34407-34426 None:intergenic 70.0%
GGGTTGCAGGCCCCAGGGTT+CGG + tig0012204:37812-37831 Msa1351380:intron 70.0%
AGCAGGGGGTTGCAGGCCCC+AGG + tig0012204:37806-37825 Msa1351380:intron 75.0%
GCAGGGGGTTGCAGGCCCCA+GGG + tig0012204:37807-37826 Msa1351380:intron 75.0%
TGCAGGCCCCAGGGTTCGGC+AGG + tig0012204:37816-37835 Msa1351380:intron 75.0%
GCAGGCCCCAGGGTTCGGCA+GGG + tig0012204:37817-37836 Msa1351380:intron 75.0%
Chromosome Type Strat End Strand Name
tig0012204 gene 32771 41447 32771 ID=Msa1351380;Name=Msa1351380
tig0012204 mRNA 32771 41447 32771 ID=Msa1351380-mRNA-1;Parent=Msa1351380;Name=Msa1351380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=297|0.93|0.93|1|0.93|0.87|16|673|658
tig0012204 exon 32771 32808 32771 ID=Msa1351380-mRNA-1:exon:7713;Parent=Msa1351380-mRNA-1
tig0012204 exon 32835 33400 32835 ID=Msa1351380-mRNA-1:exon:7714;Parent=Msa1351380-mRNA-1
tig0012204 exon 34204 34586 34204 ID=Msa1351380-mRNA-1:exon:7715;Parent=Msa1351380-mRNA-1
tig0012204 exon 34723 34800 34723 ID=Msa1351380-mRNA-1:exon:7716;Parent=Msa1351380-mRNA-1
tig0012204 exon 34898 35022 34898 ID=Msa1351380-mRNA-1:exon:7717;Parent=Msa1351380-mRNA-1
tig0012204 exon 35336 35417 35336 ID=Msa1351380-mRNA-1:exon:7718;Parent=Msa1351380-mRNA-1
tig0012204 exon 37181 37354 37181 ID=Msa1351380-mRNA-1:exon:7719;Parent=Msa1351380-mRNA-1
tig0012204 exon 37929 38010 37929 ID=Msa1351380-mRNA-1:exon:7720;Parent=Msa1351380-mRNA-1
tig0012204 exon 38680 38771 38680 ID=Msa1351380-mRNA-1:exon:7721;Parent=Msa1351380-mRNA-1
tig0012204 exon 38854 38916 38854 ID=Msa1351380-mRNA-1:exon:7722;Parent=Msa1351380-mRNA-1
tig0012204 exon 38990 39079 38990 ID=Msa1351380-mRNA-1:exon:7723;Parent=Msa1351380-mRNA-1
tig0012204 exon 39677 39801 39677 ID=Msa1351380-mRNA-1:exon:7724;Parent=Msa1351380-mRNA-1
tig0012204 exon 39949 40057 39949 ID=Msa1351380-mRNA-1:exon:7725;Parent=Msa1351380-mRNA-1
tig0012204 exon 40139 40209 40139 ID=Msa1351380-mRNA-1:exon:7726;Parent=Msa1351380-mRNA-1
tig0012204 exon 40362 40401 40362 ID=Msa1351380-mRNA-1:exon:7727;Parent=Msa1351380-mRNA-1
tig0012204 exon 40619 41447 40619 ID=Msa1351380-mRNA-1:exon:7728;Parent=Msa1351380-mRNA-1
tig0012204 five_prime_UTR 32771 32808 32771 ID=Msa1351380-mRNA-1:five_prime_utr;Parent=Msa1351380-mRNA-1
tig0012204 five_prime_UTR 32835 33093 32835 ID=Msa1351380-mRNA-1:five_prime_utr;Parent=Msa1351380-mRNA-1
tig0012204 CDS 33094 33400 33094 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 34204 34586 34204 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 34723 34800 34723 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 34898 35022 34898 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 35336 35417 35336 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 37181 37354 37181 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 37929 38010 37929 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 38680 38771 38680 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 38854 38916 38854 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 38990 39079 38990 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 39677 39801 39677 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 39949 40057 39949 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 40139 40209 40139 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 40362 40401 40362 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 CDS 40619 40774 40619 ID=Msa1351380-mRNA-1:cds;Parent=Msa1351380-mRNA-1
tig0012204 three_prime_UTR 40775 41447 40775 ID=Msa1351380-mRNA-1:three_prime_utr;Parent=Msa1351380-mRNA-1
Gene Sequence

>Msa1351380

ATGGAGTCTCTTGAACTCCCTCGTCTCTTTCTCCATCATACCCGCACTTCTTCAGCTCCAACTCGACCTTCTCATACCAACAGTTCCTCACGATTCTTACCGCAATTGGCTTTCCCTTCTAAGCTCAAGAAACCTACCAAAAATGCCACCTTGCGTTCTATTTCCGGTGACACTGACGGTGCTTCCCCTGCTTCACCAGACGGACCTATTTCCTTTGAAGATGATCAAGATAGAGGTCGTTTATTATCCAGAGAGATTGACGATTTTGGTTCTCTTGTTGCCTTTCGCTTGACTCCTCATGATTCTGATTTGATGAGAGTATTACATGCAGAGACAACTGCAGAAACTCAAGGGAATTTAAGGAGCGATGACGTTGAAAAACCAGAGATTGGGAATGCAGAAGATGAGAAGGCTCAAACTATAGTAACCCGCAACATTGTTTTTGTTACATCTGAAGCTGCACCGTATTCTAAGACTGGTGGCCTTGCAGATGTTTGTGGTTCTTTGCCAATAGCACTGGCGGGTCGCGGACACCGTGTTATGGTTATCTCTCCTAGATACGTACATGGTACTGCCGCTGATAGTAAGTTTTCTAGTGCAGTTGATCTTGCTAGCCCTATCAATGTATTTTGCTTTGGAGGCGCTCAAGAAGTTGGTTTTTTCCATGAGTATAGAGAAGGTGTTGACTGGGTATTTGTGGATCACCCTTCATTCCATAGACCAGGGAATCCTTATGGAGACAAGCACGGGACGTTTAAGGATAATCAGTTTAGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCACCATTAGTGCTTCCATTGGGAGGGTTCACTTACGGAGAAAAATGCCTATTCCTCGTTAATGATTGGCATGCCAGTTTAGTTTCAGTACTTTTGGCATCAAAGTATCGTCCATATGGGGTATATAAGGATGCACGTAGTATATTAGTGATTCACAATATTGCACACCAGGGAGTGGAACCTGCAATTACATATAGCAATTTGGGGCTGCCTCAAGAATGGTATGGAGCACTGGGATGGGTATTCCCTACTTGGGCGAGGACACATGCTCTTGACACAGGCGAAGCTGTCAATTTTCTAAAAGGCGCCATTGTTACTGCTGATCGGATAGTAACAGTAAGCAAGGGCTATTCTTGGGAGATAACAACTACAGAGGGTGGATTTGGTCTACAGGAGATACTACGAGATAGAAAGAGTATTCTGAGCGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCATCATCTGATGAACATATTGCTTCCAACTATTCTGCCGACGACATTTCTGGGAAGGTGAAATGTAAGATTGCCTTGCAGAAGGAGTTGGGTCTTCCAGTGCGACCTGATTGTCCAGTGATTGGATTCGTTGGAAGACTTGATTACCAGAAAGGTATTGACTTGATTCGCCAGGCAATTCCAGAGCTTATGCAAGACGATGTTCAATTCGTAATGCTTGGTTCGGGAAATCCTATATATGAAGACTGGATGAGAGCAACAGAATCACTTTATAAAGATAAATTTCGTGGTTGGGTTGGATTTAATGTTCCAGTATCTCATAGAATAACTGCAGGCTGTGATATATTGTTAATGCCATCAACATTCGAGCCGTGTGGACTAAATCAGTTGTATGCAATGAGATATGGAACTATACCAGTAGTTCATGAAACAGGGGGACTAAGAGATACTGTTCAAAATTTTAATCCATTTGCTGGAGGAAGCGATGCCGAAGGATGCAATGCTGAAGGCACGGGGTGGACGTTTTCTCCACTGACAAAGGAGAGAATGTTAGTGGCTCTAAGATACGCCATTCAAACATATAATGAACACAAGTCTTCATGGGAGGGATTGATGAAAAGAGGTATGACGAGAGATTACACCTGGGAAAAGGCCGCCGCTCAATACGAGCAAATCATTGAGTGGGCATTCATGGATCCACCCTATTGCTGA
Protein sequence

>Msa1351380

MESLELPRLFLHHTRTSSAPTRPSHTNSSSRFLPQLAFPSKLKKPTKNATLRSISGDTDGASPASPDGPISFEDDQDRGRLLSREIDDFGSLVAFRLTPHDSDLMRVLHAETTAETQGNLRSDDVEKPEIGNAEDEKAQTIVTRNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYVHGTAADSKFSSAVDLASPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSFHRPGNPYGDKHGTFKDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLASKYRPYGVYKDARSILVIHNIAHQGVEPAITYSNLGLPQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTTEGGFGLQEILRDRKSILSGITNGIDVTEWDPSSDEHIASNYSADDISGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAGGSDAEGCNAEGTGWTFSPLTKERMLVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEKAAAQYEQIIEWAFMDPPYC*