Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0099510 | -0.852173 | 5.491927e-61 | -8.615850e-47 |
| Msa0006880 | Msa0099510 | 0.820296 | 7.394833e-53 | -8.615850e-47 |
| Msa0027580 | Msa0099510 | 0.805948 | 1.042959e-49 | -8.615850e-47 |
| Msa0032610 | Msa0099510 | 0.801890 | 7.271880e-49 | -8.615850e-47 |
| Msa0036370 | Msa0099510 | 0.819424 | 1.170128e-52 | -8.615850e-47 |
| Msa0043730 | Msa0099510 | 0.808840 | 2.541133e-50 | -8.615850e-47 |
| Msa0048000 | Msa0099510 | 0.815607 | 8.475403e-52 | -8.615850e-47 |
| Msa0050730 | Msa0099510 | 0.801979 | 6.973346e-49 | -8.615850e-47 |
| Msa0050760 | Msa0099510 | 0.800252 | 1.572224e-48 | -8.615850e-47 |
| Msa0055150 | Msa0099510 | 0.829461 | 5.081079e-55 | -8.615850e-47 |
| Msa0056030 | Msa0099510 | 0.827647 | 1.393852e-54 | -8.615850e-47 |
| Msa0057140 | Msa0099510 | 0.823813 | 1.131604e-53 | -8.615850e-47 |
| Msa0068760 | Msa0099510 | 0.803571 | 3.271818e-49 | -8.615850e-47 |
| Msa0069260 | Msa0099510 | 0.834235 | 3.369536e-56 | -8.615850e-47 |
| Msa0069280 | Msa0099510 | 0.827543 | 1.476255e-54 | -8.615850e-47 |
| Msa0069310 | Msa0099510 | 0.841620 | 4.254549e-58 | -8.615850e-47 |
| Msa0070960 | Msa0099510 | 0.801686 | 8.010302e-49 | -8.615850e-47 |
| Msa0075340 | Msa0099510 | 0.805034 | 1.621922e-49 | -8.615850e-47 |
| Msa0090030 | Msa0099510 | 0.880114 | 7.167642e-70 | -8.615850e-47 |
| Msa0094010 | Msa0099510 | 0.803567 | 3.278180e-49 | -8.615850e-47 |
| Msa0094920 | Msa0099510 | 0.825818 | 3.809072e-54 | -8.615850e-47 |
| Msa0097990 | Msa0099510 | 0.818985 | 1.472402e-52 | -8.615850e-47 |
| Msa0099510 | Msa0100800 | 0.807114 | 5.921719e-50 | -8.615850e-47 |
| Msa0099510 | Msa0101880 | 0.800868 | 1.177854e-48 | -8.615850e-47 |
| Msa0099510 | Msa0104610 | 0.836320 | 1.002848e-56 | -8.615850e-47 |
| Msa0099510 | Msa0115460 | 0.802508 | 5.427933e-49 | -8.615850e-47 |
| Msa0099510 | Msa0120340 | 0.809519 | 1.817460e-50 | -8.615850e-47 |
| Msa0099510 | Msa0131450 | 0.823276 | 1.511336e-53 | -8.615850e-47 |
| Msa0099510 | Msa0135420 | 0.803624 | 3.189284e-49 | -8.615850e-47 |
| Msa0099510 | Msa0138970 | -0.814293 | 1.658981e-51 | -8.615850e-47 |
| Msa0099510 | Msa0140510 | -0.805104 | 1.568218e-49 | -8.615850e-47 |
| Msa0099510 | Msa0140520 | -0.818995 | 1.465138e-52 | -8.615850e-47 |
| Msa0099510 | Msa0148120 | 0.901871 | 1.727780e-78 | -8.615850e-47 |
| Msa0099510 | Msa0154770 | 0.809896 | 1.508355e-50 | -8.615850e-47 |
| Msa0099510 | Msa0156650 | -0.803995 | 2.671232e-49 | -8.615850e-47 |
| Msa0099510 | Msa0162770 | -0.812636 | 3.837887e-51 | -8.615850e-47 |
| Msa0099510 | Msa0163560 | 0.804623 | 1.976982e-49 | -8.615850e-47 |
| Msa0099510 | Msa0172350 | 0.806316 | 8.726729e-50 | -8.615850e-47 |
| Msa0099510 | Msa0172780 | 0.801107 | 1.052514e-48 | -8.615850e-47 |
| Msa0099510 | Msa0183460 | 0.809996 | 1.435173e-50 | -8.615850e-47 |
| Msa0099510 | Msa0196020 | -0.822123 | 2.803350e-53 | -8.615850e-47 |
| Msa0099510 | Msa0208810 | 0.872552 | 2.913047e-67 | -8.615850e-47 |
| Msa0099510 | Msa0211650 | 0.810095 | 1.366645e-50 | -8.615850e-47 |
| Msa0099510 | Msa0212750 | -0.844111 | 9.254572e-59 | -8.615850e-47 |
| Msa0099510 | Msa0219250 | -0.822089 | 2.853744e-53 | -8.615850e-47 |
| Msa0099510 | Msa0223100 | 0.812157 | 4.881821e-51 | -8.615850e-47 |
| Msa0099510 | Msa0223290 | 0.837858 | 4.055044e-57 | -8.615850e-47 |
| Msa0099510 | Msa0223380 | 0.828126 | 1.068937e-54 | -8.615850e-47 |
| Msa0099510 | Msa0227400 | 0.820721 | 5.906434e-53 | -8.615850e-47 |
| Msa0099510 | Msa0233610 | 0.816095 | 6.598482e-52 | -8.615850e-47 |
| Msa0099510 | Msa0239490 | 0.819742 | 9.901356e-53 | -8.615850e-47 |
| Msa0099510 | Msa0239940 | 0.815762 | 7.827842e-52 | -8.615850e-47 |
| Msa0099510 | Msa0242680 | 0.804191 | 2.432036e-49 | -8.615850e-47 |
| Msa0099510 | Msa0245850 | 0.817310 | 3.523356e-52 | -8.615850e-47 |
| Msa0099510 | Msa0252240 | 0.804752 | 1.857717e-49 | -8.615850e-47 |
| Msa0099510 | Msa0258880 | -0.817361 | 3.432447e-52 | -8.615850e-47 |
| Msa0099510 | Msa0259270 | 0.802274 | 6.063062e-49 | -8.615850e-47 |
| Msa0099510 | Msa0260210 | 0.816595 | 5.100144e-52 | -8.615850e-47 |
| Msa0099510 | Msa0260810 | 0.817334 | 3.479825e-52 | -8.615850e-47 |
| Msa0099510 | Msa0266210 | 0.819508 | 1.119430e-52 | -8.615850e-47 |
| Msa0099510 | Msa0267870 | 0.805108 | 1.564891e-49 | -8.615850e-47 |
| Msa0099510 | Msa0268090 | 0.823588 | 1.277874e-53 | -8.615850e-47 |
| Msa0099510 | Msa0275400 | -0.844830 | 5.930371e-59 | -8.615850e-47 |
| Msa0099510 | Msa0279210 | -0.814767 | 1.302507e-51 | -8.615850e-47 |
| Msa0099510 | Msa0287670 | 0.817193 | 3.743841e-52 | -8.615850e-47 |
| Msa0099510 | Msa0288730 | 0.858099 | 1.039387e-62 | -8.615850e-47 |
| Msa0099510 | Msa0289400 | 0.802931 | 4.439179e-49 | -8.615850e-47 |
| Msa0099510 | Msa0294150 | 0.816646 | 4.967186e-52 | -8.615850e-47 |
| Msa0099510 | Msa0295000 | -0.832433 | 9.479859e-56 | -8.615850e-47 |
| Msa0099510 | Msa0302650 | 0.828195 | 1.028759e-54 | -8.615850e-47 |
| Msa0099510 | Msa0304290 | 0.828888 | 6.999962e-55 | -8.615850e-47 |
| Msa0099510 | Msa0304330 | 0.834538 | 2.829426e-56 | -8.615850e-47 |
| Msa0099510 | Msa0305890 | 0.825812 | 3.822204e-54 | -8.615850e-47 |
| Msa0099510 | Msa0307110 | 0.805151 | 1.533208e-49 | -8.615850e-47 |
| Msa0099510 | Msa0308200 | 0.800363 | 1.492633e-48 | -8.615850e-47 |
| Msa0099510 | Msa0308220 | 0.822398 | 2.420001e-53 | -8.615850e-47 |
| Msa0099510 | Msa0308550 | 0.802262 | 6.097716e-49 | -8.615850e-47 |
| Msa0099510 | Msa0312310 | 0.800769 | 1.233524e-48 | -8.615850e-47 |
| Msa0099510 | Msa0318970 | -0.805778 | 1.132753e-49 | -8.615850e-47 |
| Msa0099510 | Msa0327410 | 0.802142 | 6.456306e-49 | -8.615850e-47 |
| Msa0099510 | Msa0328210 | 0.801119 | 1.046385e-48 | -8.615850e-47 |
| Msa0099510 | Msa0340810 | 0.825928 | 3.586356e-54 | -8.615850e-47 |
| Msa0099510 | Msa0359560 | 0.815670 | 8.206018e-52 | -8.615850e-47 |
| Msa0099510 | Msa0362060 | 0.809101 | 2.234735e-50 | -8.615850e-47 |
| Msa0099510 | Msa0363170 | 0.804519 | 2.077823e-49 | -8.615850e-47 |
| Msa0099510 | Msa0377530 | 0.856133 | 3.951590e-62 | -8.615850e-47 |
| Msa0099510 | Msa0380040 | 0.815315 | 9.844180e-52 | -8.615850e-47 |
| Msa0099510 | Msa0388030 | -0.809650 | 1.703771e-50 | -8.615850e-47 |
| Msa0099510 | Msa0392940 | 0.817604 | 3.024831e-52 | -8.615850e-47 |
| Msa0099510 | Msa0393950 | 0.802890 | 4.526488e-49 | -8.615850e-47 |
| Msa0099510 | Msa0394340 | 0.807886 | 4.061000e-50 | -8.615850e-47 |
| Msa0099510 | Msa0403190 | 0.816114 | 6.534671e-52 | -8.615850e-47 |
| Msa0099510 | Msa0404700 | 0.810883 | 9.234045e-51 | -8.615850e-47 |
| Msa0099510 | Msa0414950 | -0.815832 | 7.554340e-52 | -8.615850e-47 |
| Msa0099510 | Msa0419520 | 0.841285 | 5.214344e-58 | -8.615850e-47 |
| Msa0099510 | Msa0419640 | -0.822213 | 2.671726e-53 | -8.615850e-47 |
| Msa0099510 | Msa0421780 | -0.803701 | 3.074703e-49 | -8.615850e-47 |
| Msa0099510 | Msa0426810 | 0.853754 | 1.938336e-61 | -8.615850e-47 |
| Msa0099510 | Msa0427910 | 0.807463 | 4.993295e-50 | -8.615850e-47 |
| Msa0099510 | Msa0429290 | 0.811226 | 7.782085e-51 | -8.615850e-47 |
| Msa0099510 | Msa0437510 | 0.821615 | 3.674322e-53 | -8.615850e-47 |
| Msa0099510 | Msa0439890 | 0.811568 | 6.561192e-51 | -8.615850e-47 |
| Msa0099510 | Msa0449820 | 0.821824 | 3.288269e-53 | -8.615850e-47 |
| Msa0099510 | Msa0460930 | 0.805798 | 1.121921e-49 | -8.615850e-47 |
| Msa0099510 | Msa0462220 | 0.800784 | 1.225302e-48 | -8.615850e-47 |
| Msa0099510 | Msa0462540 | 0.836082 | 1.152837e-56 | -8.615850e-47 |
| Msa0099510 | Msa0464900 | 0.824917 | 6.224316e-54 | -8.615850e-47 |
| Msa0099510 | Msa0465550 | 0.830651 | 2.604841e-55 | -8.615850e-47 |
| Msa0099510 | Msa0465920 | 0.801564 | 8.483505e-49 | -8.615850e-47 |
| Msa0099510 | Msa0467900 | -0.811114 | 8.232645e-51 | -8.615850e-47 |
| Msa0099510 | Msa0467960 | -0.801313 | 9.551144e-49 | -8.615850e-47 |
| Msa0099510 | Msa0469790 | 0.812866 | 3.417966e-51 | -8.615850e-47 |
| Msa0099510 | Msa0469910 | -0.801034 | 1.089243e-48 | -8.615850e-47 |
| Msa0099510 | Msa0473240 | 0.803058 | 4.178536e-49 | -8.615850e-47 |
| Msa0099510 | Msa0475580 | 0.806340 | 8.625979e-50 | -8.615850e-47 |
| Msa0099510 | Msa0480320 | 0.800692 | 1.279241e-48 | -8.615850e-47 |
| Msa0099510 | Msa0489610 | 0.820842 | 5.539560e-53 | -8.615850e-47 |
| Msa0099510 | Msa0493920 | 0.803707 | 3.065825e-49 | -8.615850e-47 |
| Msa0099510 | Msa0505060 | 0.836301 | 1.013768e-56 | -8.615850e-47 |
| Msa0099510 | Msa0506940 | 0.819995 | 8.664477e-53 | -8.615850e-47 |
| Msa0099510 | Msa0511490 | 0.815855 | 7.464101e-52 | -8.615850e-47 |
| Msa0099510 | Msa0513440 | 0.800354 | 1.499258e-48 | -8.615850e-47 |
| Msa0099510 | Msa0517490 | 0.858503 | 7.876018e-63 | -8.615850e-47 |
| Msa0099510 | Msa0519190 | 0.804552 | 2.044873e-49 | -8.615850e-47 |
| Msa0099510 | Msa0519220 | 0.819086 | 1.396720e-52 | -8.615850e-47 |
| Msa0099510 | Msa0524600 | 0.805940 | 1.047101e-49 | -8.615850e-47 |
| Msa0099510 | Msa0536790 | 0.814285 | 1.665333e-51 | -8.615850e-47 |
| Msa0099510 | Msa0542160 | 0.831637 | 1.490926e-55 | -8.615850e-47 |
| Msa0099510 | Msa0547400 | 0.803985 | 2.683395e-49 | -8.615850e-47 |
| Msa0099510 | Msa0553220 | -0.814315 | 1.639955e-51 | -8.615850e-47 |
| Msa0099510 | Msa0555200 | 0.811222 | 7.799238e-51 | -8.615850e-47 |
| Msa0099510 | Msa0556790 | 0.823719 | 1.190759e-53 | -8.615850e-47 |
| Msa0099510 | Msa0578090 | 0.814551 | 1.454497e-51 | -8.615850e-47 |
| Msa0099510 | Msa0579370 | 0.813874 | 2.052505e-51 | -8.615850e-47 |
| Msa0099510 | Msa0586850 | 0.811197 | 7.898459e-51 | -8.615850e-47 |
| Msa0099510 | Msa0591540 | 0.808178 | 3.518990e-50 | -8.615850e-47 |
| Msa0099510 | Msa0591770 | 0.814157 | 1.777128e-51 | -8.615850e-47 |
| Msa0099510 | Msa0602120 | 0.812677 | 3.759574e-51 | -8.615850e-47 |
| Msa0099510 | Msa0602370 | 0.812327 | 4.484028e-51 | -8.615850e-47 |
| Msa0099510 | Msa0603670 | 0.818239 | 2.174892e-52 | -8.615850e-47 |
| Msa0099510 | Msa0609000 | 0.806807 | 6.873758e-50 | -8.615850e-47 |
| Msa0099510 | Msa0609970 | 0.815026 | 1.141260e-51 | -8.615850e-47 |
| Msa0099510 | Msa0610500 | 0.820441 | 6.846716e-53 | -8.615850e-47 |
| Msa0099510 | Msa0614990 | 0.830193 | 3.371030e-55 | -8.615850e-47 |
| Msa0099510 | Msa0626680 | 0.808010 | 3.820384e-50 | -8.615850e-47 |
| Msa0099510 | Msa0641140 | 0.801255 | 9.816179e-49 | -8.615850e-47 |
| Msa0099510 | Msa0643250 | 0.800162 | 1.640101e-48 | -8.615850e-47 |
| Msa0099510 | Msa0650620 | 0.812372 | 4.381565e-51 | -8.615850e-47 |
| Msa0099510 | Msa0651150 | 0.838410 | 2.924058e-57 | -8.615850e-47 |
| Msa0099510 | Msa0664760 | 0.808025 | 3.793033e-50 | -8.615850e-47 |
| Msa0099510 | Msa0669850 | 0.820596 | 6.309980e-53 | -8.615850e-47 |
| Msa0099510 | Msa0675990 | 0.803516 | 3.358204e-49 | -8.615850e-47 |
| Msa0099510 | Msa0677270 | 0.802435 | 5.617778e-49 | -8.615850e-47 |
| Msa0099510 | Msa0677770 | 0.801707 | 7.929466e-49 | -8.615850e-47 |
| Msa0099510 | Msa0679680 | 0.802685 | 4.988898e-49 | -8.615850e-47 |
| Msa0099510 | Msa0694840 | 0.821821 | 3.293791e-53 | -8.615850e-47 |
| Msa0099510 | Msa0711490 | 0.805858 | 1.089427e-49 | -8.615850e-47 |
| Msa0099510 | Msa0715110 | 0.813022 | 3.157893e-51 | -8.615850e-47 |
| Msa0099510 | Msa0715150 | 0.801685 | 8.013934e-49 | -8.615850e-47 |
| Msa0099510 | Msa0726830 | 0.811183 | 7.953039e-51 | -8.615850e-47 |
| Msa0099510 | Msa0726860 | 0.810093 | 1.368366e-50 | -8.615850e-47 |
| Msa0099510 | Msa0737800 | 0.800151 | 1.648698e-48 | -8.615850e-47 |
| Msa0099510 | Msa0743260 | 0.842497 | 2.494445e-58 | -8.615850e-47 |
| Msa0099510 | Msa0754720 | -0.834822 | 2.400330e-56 | -8.615850e-47 |
| Msa0099510 | Msa0774750 | 0.825954 | 3.535933e-54 | -8.615850e-47 |
| Msa0099510 | Msa0784620 | 0.809379 | 1.948515e-50 | -8.615850e-47 |
| Msa0099510 | Msa0791820 | 0.947945 | 2.494893e-106 | -8.615850e-47 |
| Msa0099510 | Msa0792090 | 0.812289 | 4.568568e-51 | -8.615850e-47 |
| Msa0099510 | Msa0793390 | 0.807772 | 4.293858e-50 | -8.615850e-47 |
| Msa0099510 | Msa0799010 | -0.812448 | 4.218138e-51 | -8.615850e-47 |
| Msa0099510 | Msa0806920 | 0.803847 | 2.867256e-49 | -8.615850e-47 |
| Msa0099510 | Msa0812290 | 0.817147 | 3.834093e-52 | -8.615850e-47 |
| Msa0099510 | Msa0814250 | 0.810164 | 1.320797e-50 | -8.615850e-47 |
| Msa0099510 | Msa0820530 | -0.823474 | 1.358786e-53 | -8.615850e-47 |
| Msa0099510 | Msa0824730 | 0.815117 | 1.089567e-51 | -8.615850e-47 |
| Msa0099510 | Msa0850710 | 0.802271 | 6.072118e-49 | -8.615850e-47 |
| Msa0099510 | Msa0860900 | -0.810590 | 1.068568e-50 | -8.615850e-47 |
| Msa0099510 | Msa0874500 | 0.837279 | 5.709974e-57 | -8.615850e-47 |
| Msa0099510 | Msa0874570 | 0.805525 | 1.280061e-49 | -8.615850e-47 |
| Msa0099510 | Msa0882510 | 0.801348 | 9.396569e-49 | -8.615850e-47 |
| Msa0099510 | Msa0895310 | 0.826889 | 2.116918e-54 | -8.615850e-47 |
| Msa0099510 | Msa0908170 | 0.844151 | 9.025998e-59 | -8.615850e-47 |
| Msa0099510 | Msa0922030 | 0.809835 | 1.554728e-50 | -8.615850e-47 |
| Msa0099510 | Msa0933290 | 0.807634 | 4.592824e-50 | -8.615850e-47 |
| Msa0099510 | Msa0933440 | 0.810778 | 9.733766e-51 | -8.615850e-47 |
| Msa0099510 | Msa0944730 | 0.821792 | 3.345023e-53 | -8.615850e-47 |
| Msa0099510 | Msa0945100 | 0.814651 | 1.382066e-51 | -8.615850e-47 |
| Msa0099510 | Msa0994390 | 0.801920 | 7.170564e-49 | -8.615850e-47 |
| Msa0099510 | Msa1001350 | 0.802439 | 5.606562e-49 | -8.615850e-47 |
| Msa0099510 | Msa1002600 | -0.815479 | 9.052334e-52 | -8.615850e-47 |
| Msa0099510 | Msa1015060 | 0.807476 | 4.961141e-50 | -8.615850e-47 |
| Msa0099510 | Msa1029970 | 0.802695 | 4.966695e-49 | -8.615850e-47 |
| Msa0099510 | Msa1040800 | 0.831800 | 1.359201e-55 | -8.615850e-47 |
| Msa0099510 | Msa1040890 | 0.813269 | 2.787691e-51 | -8.615850e-47 |
| Msa0099510 | Msa1041520 | 0.808304 | 3.307294e-50 | -8.615850e-47 |
| Msa0099510 | Msa1047720 | 0.822626 | 2.142310e-53 | -8.615850e-47 |
| Msa0099510 | Msa1048700 | 0.812651 | 3.808837e-51 | -8.615850e-47 |
| Msa0099510 | Msa1069660 | -0.812651 | 3.808780e-51 | -8.615850e-47 |
| Msa0099510 | Msa1072460 | -0.824112 | 9.631160e-54 | -8.615850e-47 |
| Msa0099510 | Msa1077670 | 0.806839 | 6.769232e-50 | -8.615850e-47 |
| Msa0099510 | Msa1079370 | -0.801804 | 7.574441e-49 | -8.615850e-47 |
| Msa0099510 | Msa1081560 | 0.805167 | 1.521318e-49 | -8.615850e-47 |
| Msa0099510 | Msa1087510 | -0.816227 | 6.164412e-52 | -8.615850e-47 |
| Msa0099510 | Msa1089840 | 0.826685 | 2.368277e-54 | -8.615850e-47 |
| Msa0099510 | Msa1093330 | 0.815744 | 7.900901e-52 | -8.615850e-47 |
| Msa0099510 | Msa1118940 | 0.809360 | 1.966115e-50 | -8.615850e-47 |
| Msa0099510 | Msa1126120 | -0.815984 | 6.985434e-52 | -8.615850e-47 |
| Msa0099510 | Msa1130210 | -0.816077 | 6.660751e-52 | -8.615850e-47 |
| Msa0099510 | Msa1135880 | 0.806083 | 9.770756e-50 | -8.615850e-47 |
| Msa0099510 | Msa1162830 | 0.815391 | 9.469564e-52 | -8.615850e-47 |
| Msa0099510 | Msa1166410 | 0.806447 | 8.190115e-50 | -8.615850e-47 |
| Msa0099510 | Msa1171870 | 0.813480 | 2.505926e-51 | -8.615850e-47 |
| Msa0099510 | Msa1172130 | -0.820793 | 5.685537e-53 | -8.615850e-47 |
| Msa0099510 | Msa1178370 | 0.815038 | 1.134303e-51 | -8.615850e-47 |
| Msa0099510 | Msa1182630 | 0.839961 | 1.158443e-57 | -8.615850e-47 |
| Msa0099510 | Msa1182640 | 0.803581 | 3.256562e-49 | -8.615850e-47 |
| Msa0099510 | Msa1190890 | -0.841468 | 4.666190e-58 | -8.615850e-47 |
| Msa0099510 | Msa1193950 | -0.803080 | 4.135491e-49 | -8.615850e-47 |
| Msa0099510 | Msa1211050 | -0.826894 | 2.111789e-54 | -8.615850e-47 |
| Msa0099510 | Msa1219810 | 0.816100 | 6.581406e-52 | -8.615850e-47 |
| Msa0099510 | Msa1236070 | -0.833341 | 5.638080e-56 | -8.615850e-47 |
| Msa0099510 | Msa1246530 | -0.808679 | 2.750995e-50 | -8.615850e-47 |
| Msa0099510 | Msa1249920 | 0.823332 | 1.466548e-53 | -8.615850e-47 |
| Msa0099510 | Msa1253810 | 0.804596 | 2.002732e-49 | -8.615850e-47 |
| Msa0099510 | Msa1267260 | 0.805285 | 1.437369e-49 | -8.615850e-47 |
| Msa0099510 | Msa1269300 | 0.817905 | 2.586871e-52 | -8.615850e-47 |
| Msa0099510 | Msa1276190 | 0.802341 | 5.873450e-49 | -8.615850e-47 |
| Msa0099510 | Msa1280620 | 0.819659 | 1.034068e-52 | -8.615850e-47 |
| Msa0099510 | Msa1291350 | 0.812743 | 3.635470e-51 | -8.615850e-47 |
| Msa0099510 | Msa1300860 | 0.807332 | 5.323099e-50 | -8.615850e-47 |
| Msa0099510 | Msa1303160 | 0.808584 | 2.882989e-50 | -8.615850e-47 |
| Msa0099510 | Msa1306430 | 0.816085 | 6.633424e-52 | -8.615850e-47 |
| Msa0099510 | Msa1330890 | -0.827061 | 1.925733e-54 | -8.615850e-47 |
| Msa0099510 | Msa1340260 | 0.806853 | 6.723061e-50 | -8.615850e-47 |
| Msa0099510 | Msa1340830 | 0.805688 | 1.183171e-49 | -8.615850e-47 |
| Msa0099510 | Msa1350690 | 0.817243 | 3.648598e-52 | -8.615850e-47 |
| Msa0099510 | Msa1363700 | 0.859920 | 2.961359e-63 | -8.615850e-47 |
| Msa0099510 | Msa1365860 | 0.808605 | 2.852523e-50 | -8.615850e-47 |
| Msa0099510 | Msa1370620 | 0.812231 | 4.705033e-51 | -8.615850e-47 |
| Msa0099510 | Msa1371090 | 0.867048 | 1.823129e-65 | -8.615850e-47 |
| Msa0099510 | Msa1388860 | 0.824065 | 9.876841e-54 | -8.615850e-47 |
| Msa0099510 | Msa1390230 | 0.818949 | 1.500564e-52 | -8.615850e-47 |
| Msa0099510 | Msa1390310 | 0.803447 | 3.470877e-49 | -8.615850e-47 |
| Msa0099510 | Msa1403930 | -0.811109 | 8.250778e-51 | -8.615850e-47 |
| Msa0099510 | Msa1404540 | 0.833478 | 5.210702e-56 | -8.615850e-47 |
| Msa0099510 | Msa1417810 | -0.812325 | 4.486868e-51 | -8.615850e-47 |
| Msa0099510 | Msa1431060 | 0.834403 | 3.057633e-56 | -8.615850e-47 |
| Msa0099510 | Msa1439960 | 0.815482 | 9.037741e-52 | -8.615850e-47 |
| Msa0099510 | Msa1440600 | 0.801342 | 9.420173e-49 | -8.615850e-47 |
| Msa0099510 | Msa1442220 | -0.847007 | 1.518026e-59 | -8.615850e-47 |
| Msa0099510 | Msa1445400 | -0.813879 | 2.046456e-51 | -8.615850e-47 |
| Msa0099510 | Msa1447110 | 0.813018 | 3.164985e-51 | -8.615850e-47 |
| Msa0099510 | Msa1449350 | -0.809119 | 2.215384e-50 | -8.615850e-47 |
| Msa0099510 | Msa1449910 | 0.833182 | 6.175204e-56 | -8.615850e-47 |
| Msa0099510 | Msa1452470 | 0.811646 | 6.307668e-51 | -8.615850e-47 |
| Msa0099510 | Msa1459760 | -0.829708 | 4.425116e-55 | -8.615850e-47 |
| Msa0099510 | Msa1465960 | 0.820526 | 6.545732e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCTCGTATTGCGTTTC+TGG | 0.078961 | 1_3:+5703266 | Msa0099510:CDS |
| TTTAATAAAAGTACCTATTA+AGG | 0.203571 | 1_3:+5706484 | Msa0099510:three_prime_UTR |
| CCTAACAAGGACTTCTTAAA+TGG | 0.209426 | 1_3:+5706429 | Msa0099510:three_prime_UTR |
| CCATTTAAGAAGTCCTTGTT+AGG | 0.302390 | 1_3:-5706429 | None:intergenic |
| GGAGTCATTGAGTCCTTAAT+AGG | 0.311466 | 1_3:-5706497 | None:intergenic |
| CCACTTATTTCATCAGCTCT+TGG | 0.313585 | 1_3:-5706327 | None:intergenic |
| CCAATGGCAATACACTAATA+AGG | 0.333548 | 1_3:+5706518 | Msa0099510:three_prime_UTR |
| CACTTATTTCATCAGCTCTT+GGG | 0.335558 | 1_3:-5706326 | None:intergenic |
| TAATGACGTGGCTACTGATA+TGG | 0.339918 | 1_3:+5706302 | Msa0099510:CDS |
| GTATATATATCTCGATAAAT+TGG | 0.353673 | 1_3:-5703214 | None:intergenic |
| ATCGTTCTTCACTTTGTTCA+AGG | 0.368128 | 1_3:+5703395 | Msa0099510:CDS |
| AACAGTGAAGAACCTGAAAA+TGG | 0.369679 | 1_3:-5703364 | None:intergenic |
| TGTTTAATATGTAAAGATAG+TGG | 0.372557 | 1_3:-5706569 | None:intergenic |
| GAAATAAGTGGGAACAAGAA+TGG | 0.424242 | 1_3:+5706339 | Msa0099510:CDS |
| TATACTCAACCCATGAAAAT+CGG | 0.441026 | 1_3:-5706241 | None:intergenic |
| TCGAGATATATATACACTCT+TGG | 0.453771 | 1_3:+5703222 | Msa0099510:CDS |
| CCTTATTAGTGTATTGCCAT+TGG | 0.462794 | 1_3:-5706518 | None:intergenic |
| CACCACTCGTTCTTCATGTT+AGG | 0.479229 | 1_3:+5703311 | Msa0099510:CDS |
| TCTCGTATTGCGTTTCTGGT+TGG | 0.488286 | 1_3:+5703270 | Msa0099510:CDS |
| AAATAAGTGGGAACAAGAAT+GGG | 0.494120 | 1_3:+5706340 | Msa0099510:CDS |
| GCCTCTTACTGAGAAGCAAA+AGG | 0.498437 | 1_3:+5705672 | Msa0099510:CDS |
| GTTTAATATGTAAAGATAGT+GGG | 0.500740 | 1_3:-5706568 | None:intergenic |
| TAGCAAGATCTCGCGTAAGA+AGG | 0.519092 | 1_3:+5706266 | Msa0099510:CDS |
| CGATAAATTGGTGGGTTACG+CGG | 0.536770 | 1_3:-5703202 | None:intergenic |
| GTAATAAAATGTGTACTACT+TGG | 0.542705 | 1_3:-5706629 | None:intergenic |
| CCAAGAGCTGATGAAATAAG+TGG | 0.548552 | 1_3:+5706327 | Msa0099510:CDS |
| CTTGCCTTACGAACACAACA+AGG | 0.548998 | 1_3:-5706090 | None:intergenic |
| TATATATCTCGATAAATTGG+TGG | 0.554956 | 1_3:-5703211 | None:intergenic |
| CATTTAAGAAGTCCTTGTTA+GGG | 0.555602 | 1_3:-5706428 | None:intergenic |
| TTATTACTTCTTTATGCAAG+TGG | 0.560226 | 1_3:+5706645 | Msa0099510:three_prime_UTR |
| GATGGGCCTAGAAGAAGAAA+AGG | 0.562178 | 1_3:+5706362 | Msa0099510:CDS |
| TATTACTTCTTTATGCAAGT+GGG | 0.564425 | 1_3:+5706646 | Msa0099510:three_prime_UTR |
| TTGGTTGCCGATATTCACTC+AGG | 0.577042 | 1_3:+5703241 | Msa0099510:CDS |
| TAAGGACTCAATGACTCCAA+TGG | 0.582041 | 1_3:+5706502 | Msa0099510:three_prime_UTR |
| ATATATCTCGATAAATTGGT+GGG | 0.596774 | 1_3:-5703210 | None:intergenic |
| ACATTAATCAGAATTTGCTA+AGG | 0.598746 | 1_3:+5705582 | Msa0099510:intron |
| AAGTGGGAACAAGAATGGGA+TGG | 0.602710 | 1_3:+5706344 | Msa0099510:CDS |
| AGTGGGAACAAGAATGGGAT+GGG | 0.603182 | 1_3:+5706345 | Msa0099510:CDS |
| TAAGGAAGCAATATGTGTGG+TGG | 0.605756 | 1_3:+5706058 | Msa0099510:CDS |
| TAAATAAGTGATGTGTCATG+TGG | 0.615886 | 1_3:-5706455 | None:intergenic |
| AAATAAGTGATGTGTCATGT+GGG | 0.637170 | 1_3:-5706454 | None:intergenic |
| TTGTTAGGGAACTACCATTG+TGG | 0.643353 | 1_3:-5706414 | None:intergenic |
| ATAATAAAATGTGTACCACT+TGG | 0.644139 | 1_3:-5706670 | None:intergenic |
| CAAGAGCTGATGAAATAAGT+GGG | 0.648536 | 1_3:+5706328 | Msa0099510:CDS |
| ACAATGGTAGTTCCCTAACA+AGG | 0.650300 | 1_3:+5706416 | Msa0099510:three_prime_UTR |
| TTTATGCAAGTGGGACCAAG+TGG | 0.651613 | 1_3:+5706655 | Msa0099510:three_prime_UTR |
| TGCCTAACATGAAGAACGAG+TGG | 0.655381 | 1_3:-5703313 | None:intergenic |
| TTTACTGGTTGATAATGACG+TGG | 0.662198 | 1_3:+5706290 | Msa0099510:CDS |
| AAATAAGGAAGCAATATGTG+TGG | 0.684740 | 1_3:+5706055 | Msa0099510:CDS |
| TTGCCTTACGAACACAACAA+GGG | 0.696788 | 1_3:-5706089 | None:intergenic |
| AGTTATTAGAGCATCCACAA+TGG | 0.718789 | 1_3:+5706400 | Msa0099510:three_prime_UTR |
| AATAAGTGATGTGTCATGTG+GGG | 0.739169 | 1_3:-5706453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATATATTAGCA+TGG | + | chr1_3:5704506-5704525 | Msa0099510:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAAGATG+AGG | - | chr1_3:5705504-5705523 | None:intergenic | 10.0% |
| !!! | ATTATTTTCTATTTTGTTTA+TGG | + | chr1_3:5705941-5705960 | Msa0099510:intron | 10.0% |
| !! | TAAAAATTTAAACAGAAATA+AGG | + | chr1_3:5706040-5706059 | Msa0099510:intron | 10.0% |
| !!! | TTTTATTATTTTTTTAAACG+TGG | + | chr1_3:5706684-5706703 | Msa0099510:three_prime_UTR | 10.0% |
| !!! | TTCATTACTTTTTCAATTAT+AGG | + | chr1_3:5703750-5703769 | Msa0099510:intron | 15.0% |
| !! | AACATATTATTACAACATTA+CGG | - | chr1_3:5704140-5704159 | None:intergenic | 15.0% |
| !! | AAAATAATAGAGAATGAAAT+GGG | - | chr1_3:5704959-5704978 | None:intergenic | 15.0% |
| !! | AAAAAAATAGAGAATGAAAT+GGG | - | chr1_3:5705446-5705465 | None:intergenic | 15.0% |
| !!! | TTTAATAAAAGTACCTATTA+AGG | + | chr1_3:5706484-5706503 | Msa0099510:three_prime_UTR | 15.0% |
| !! | GTATATATATCTCGATAAAT+TGG | - | chr1_3:5703217-5703236 | None:intergenic | 20.0% |
| !!! | TCAATTTGTTCTGAAATTTT+TGG | + | chr1_3:5703518-5703537 | Msa0099510:intron | 20.0% |
| !!! | CAATTTGTTCTGAAATTTTT+GGG | + | chr1_3:5703519-5703538 | Msa0099510:intron | 20.0% |
| !! | ATAAAAATACCTCAAATCAA+AGG | - | chr1_3:5703559-5703578 | None:intergenic | 20.0% |
| !! | ACCTATCAACTAATTAAAAA+AGG | - | chr1_3:5703632-5703651 | None:intergenic | 20.0% |
| !!! | TTTTGAAATTTTGGAGTATA+AGG | + | chr1_3:5703651-5703670 | Msa0099510:intron | 20.0% |
| !!! | TTTGAAATTTTGGAGTATAA+GGG | + | chr1_3:5703652-5703671 | Msa0099510:intron | 20.0% |
| !! | GAAAAAATAAACCAATTCAA+AGG | - | chr1_3:5703685-5703704 | None:intergenic | 20.0% |
| !!! | TCAATCTGTTCTAAATTTTT+TGG | + | chr1_3:5703780-5703799 | Msa0099510:intron | 20.0% |
| !!! | CAATCTGTTCTAAATTTTTT+GGG | + | chr1_3:5703781-5703800 | Msa0099510:intron | 20.0% |
| !!! | AGATTTAAATCCTTTTGAAT+TGG | + | chr1_3:5703808-5703827 | Msa0099510:intron | 20.0% |
| !!! | GATTTAAATCCTTTTGAATT+GGG | + | chr1_3:5703809-5703828 | Msa0099510:intron | 20.0% |
| !!! | ATTTAAATCCTTTTGAATTG+GGG | + | chr1_3:5703810-5703829 | Msa0099510:intron | 20.0% |
| !! | ACTATTATTAAGGACTAATT+TGG | + | chr1_3:5703909-5703928 | Msa0099510:intron | 20.0% |
| !! | AAAGTTAAAAAACAAAGACA+AGG | - | chr1_3:5703940-5703959 | None:intergenic | 20.0% |
| !! | GTGTAGGAAAAAAATTATAT+TGG | - | chr1_3:5704226-5704245 | None:intergenic | 20.0% |
| !! | TATATATATATTAGCATGGT+AGG | + | chr1_3:5704510-5704529 | Msa0099510:intron | 20.0% |
| !!! | CTTCCTTTATTTTGTTAAAT+GGG | - | chr1_3:5704839-5704858 | None:intergenic | 20.0% |
| !!! | TCTTCCTTTATTTTGTTAAA+TGG | - | chr1_3:5704840-5704859 | None:intergenic | 20.0% |
| !! | GAAAATAATAGAGAATGAAA+TGG | - | chr1_3:5704960-5704979 | None:intergenic | 20.0% |
| !! | TGATTACATAAGAAACAAAA+GGG | - | chr1_3:5705064-5705083 | None:intergenic | 20.0% |
| !! | TTGATTACATAAGAAACAAA+AGG | - | chr1_3:5705065-5705084 | None:intergenic | 20.0% |
| !! | ATCAAAACATTAAACAGAAT+TGG | + | chr1_3:5705080-5705099 | Msa0099510:intron | 20.0% |
| !! | GAAAAAAATAGAGAATGAAA+TGG | - | chr1_3:5705447-5705466 | None:intergenic | 20.0% |
| !! | TGATCAAATAAGAAACAAAA+GGG | - | chr1_3:5705560-5705579 | None:intergenic | 20.0% |
| !! | TTGATCAAATAAGAAACAAA+AGG | - | chr1_3:5705561-5705580 | None:intergenic | 20.0% |
| !! | AAAATCTAAATCATAACAGA+TGG | - | chr1_3:5705782-5705801 | None:intergenic | 20.0% |
| !! | AGTTAAAAAAAAAAAAGACG+AGG | - | chr1_3:5705975-5705994 | None:intergenic | 20.0% |
| !! | TAAACAAATAAGAAGTGAAA+GGG | - | chr1_3:5706022-5706041 | None:intergenic | 20.0% |
| !! | TTAAACAAATAAGAAGTGAA+AGG | - | chr1_3:5706023-5706042 | None:intergenic | 20.0% |
| !!! | CATATTTAAGTACTTTTCAT+TGG | - | chr1_3:5706547-5706566 | None:intergenic | 20.0% |
| !! | GTTTAATATGTAAAGATAGT+GGG | - | chr1_3:5706571-5706590 | None:intergenic | 20.0% |
| !! | TGTTTAATATGTAAAGATAG+TGG | - | chr1_3:5706572-5706591 | None:intergenic | 20.0% |
| !!! | TATTACTCATTTTTACAAGT+GGG | + | chr1_3:5706605-5706624 | Msa0099510:three_prime_UTR | 20.0% |
| ! | ATATATCTCGATAAATTGGT+GGG | - | chr1_3:5703213-5703232 | None:intergenic | 25.0% |
| ! | TATATATCTCGATAAATTGG+TGG | - | chr1_3:5703214-5703233 | None:intergenic | 25.0% |
| !!! | TTCTGAAATTTTTGGGATTA+GGG | + | chr1_3:5703526-5703545 | Msa0099510:intron | 25.0% |
| !!! | GCCTTTTTTAATTAGTTGAT+AGG | + | chr1_3:5703628-5703647 | Msa0099510:intron | 25.0% |
| !!! | GTTGATAGGTTTTGAAATTT+TGG | + | chr1_3:5703642-5703661 | Msa0099510:intron | 25.0% |
| ! | TGAAGAAATAAGAAACAGAA+GGG | - | chr1_3:5703985-5704004 | None:intergenic | 25.0% |
| ! | TTGAAGAAATAAGAAACAGA+AGG | - | chr1_3:5703986-5704005 | None:intergenic | 25.0% |
| ! | TCAATTGCTAAGATGAAAAA+AGG | + | chr1_3:5704092-5704111 | Msa0099510:CDS | 25.0% |
| !!! | AAGTAGTGTTGATTAATGAA+AGG | + | chr1_3:5704281-5704300 | Msa0099510:intron | 25.0% |
| !!! | AGTAGTGTTGATTAATGAAA+GGG | + | chr1_3:5704282-5704301 | Msa0099510:intron | 25.0% |
| !!! | TTTTAACTTTTCCGTATAGT+AGG | + | chr1_3:5704333-5704352 | Msa0099510:intron | 25.0% |
| ! | TACATCTAAATTGAGCAATT+TGG | - | chr1_3:5704420-5704439 | None:intergenic | 25.0% |
| ! | AACATACTCATAATCGTTAA+GGG | - | chr1_3:5704585-5704604 | None:intergenic | 25.0% |
| ! | AAACATACTCATAATCGTTA+AGG | - | chr1_3:5704586-5704605 | None:intergenic | 25.0% |
| ! | AGGGTGAGATTATATTAATA+TGG | - | chr1_3:5705045-5705064 | None:intergenic | 25.0% |
| ! | TCTTATCAATATGTTCTATG+CGG | + | chr1_3:5705231-5705250 | Msa0099510:intron | 25.0% |
| ! | TCTATGCGGTTAAATTAATT+TGG | + | chr1_3:5705245-5705264 | Msa0099510:intron | 25.0% |
| !! | AGGTTGCATTTTCATAAAAT+AGG | - | chr1_3:5705349-5705368 | None:intergenic | 25.0% |
| !!! | AGGGTGAGATTATTTTAATA+CGG | - | chr1_3:5705541-5705560 | None:intergenic | 25.0% |
| !!! | ACATTAATCAGAATTTGCTA+AGG | + | chr1_3:5705582-5705601 | Msa0099510:intron | 25.0% |
| ! | AAATCTCAACTATGTTAATG+TGG | + | chr1_3:5706122-5706141 | Msa0099510:intron | 25.0% |
| !!! | CTATTACTCATTTTTACAAG+TGG | + | chr1_3:5706604-5706623 | Msa0099510:three_prime_UTR | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr1_3:5706632-5706651 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | + | chr1_3:5706645-5706664 | Msa0099510:three_prime_UTR | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | + | chr1_3:5706646-5706665 | Msa0099510:three_prime_UTR | 25.0% |
| ! | ATAATAAAATGTGTACCACT+TGG | - | chr1_3:5706673-5706692 | None:intergenic | 25.0% |
| TCGAGATATATATACACTCT+TGG | + | chr1_3:5703222-5703241 | Msa0099510:CDS | 30.0% | |
| AGAAAAACCTGAGTGAATAT+CGG | - | chr1_3:5703251-5703270 | None:intergenic | 30.0% | |
| ! | TTTGTCTTTGTTCCATTTTC+AGG | + | chr1_3:5703352-5703371 | Msa0099510:CDS | 30.0% |
| ATCACAACTAAGATTGAGAA+AGG | - | chr1_3:5703495-5703514 | None:intergenic | 30.0% | |
| !!! | GTTCTGAAATTTTTGGGATT+AGG | + | chr1_3:5703525-5703544 | Msa0099510:intron | 30.0% |
| !! | GGTTTAAAACCTTTGATTTG+AGG | + | chr1_3:5703547-5703566 | Msa0099510:intron | 30.0% |
| TAATTAAAAAAGGCAGTGTC+GGG | - | chr1_3:5703622-5703641 | None:intergenic | 30.0% | |
| CTAATTAAAAAAGGCAGTGT+CGG | - | chr1_3:5703623-5703642 | None:intergenic | 30.0% | |
| ! | AGGGTTTAAAACCTTTGAAT+TGG | + | chr1_3:5703671-5703690 | Msa0099510:intron | 30.0% |
| !! | GATGATTTTAACGTCAAATG+AGG | - | chr1_3:5704074-5704093 | None:intergenic | 30.0% |
| ! | ATAGAAGTGTAAAAGTGTGT+AGG | - | chr1_3:5704242-5704261 | None:intergenic | 30.0% |
| ! | ACACACTTTTACACTTCTAT+AGG | + | chr1_3:5704242-5704261 | Msa0099510:intron | 30.0% |
| CAATTTGGTACACTGAAAAA+AGG | - | chr1_3:5704405-5704424 | None:intergenic | 30.0% | |
| GTATATGAGACCTTAAAATC+TGG | + | chr1_3:5704618-5704637 | Msa0099510:intron | 30.0% | |
| ! | ATGTAGATCTCCAGATTTTA+AGG | - | chr1_3:5704631-5704650 | None:intergenic | 30.0% |
| AGAAAGTTAGAAGAGTTACA+AGG | + | chr1_3:5704767-5704786 | Msa0099510:intron | 30.0% | |
| AGGCCCATTTAACAAAATAA+AGG | + | chr1_3:5704833-5704852 | Msa0099510:intron | 30.0% | |
| !!! | GGGTTATGTTTATTTTGCTA+TGG | + | chr1_3:5704918-5704937 | Msa0099510:intron | 30.0% |
| GAAGTTGCTAAGAAGAAAAA+AGG | + | chr1_3:5705132-5705151 | Msa0099510:CDS | 30.0% | |
| CATATTAACACTCAATCAAG+AGG | - | chr1_3:5705369-5705388 | None:intergenic | 30.0% | |
| GTGTTAATATGCACATAAGT+TGG | + | chr1_3:5705378-5705397 | Msa0099510:intron | 30.0% | |
| !!! | GCTGTCTTCTATTTTGTTTT+TGG | + | chr1_3:5704983-5705002 | Msa0099510:intron | 30.0% |
| TTCCTAAGAAGCAAAAAGTA+GGG | + | chr1_3:5705635-5705654 | Msa0099510:CDS | 30.0% | |
| TCTTTGCAGTGAAATTAGTT+TGG | + | chr1_3:5705738-5705757 | Msa0099510:intron | 30.0% | |
| ! | CTTTGCAGTGAAATTAGTTT+GGG | + | chr1_3:5705739-5705758 | Msa0099510:intron | 30.0% |
| ! | TTTGCAGTGAAATTAGTTTG+GGG | + | chr1_3:5705740-5705759 | Msa0099510:intron | 30.0% |
| TAAAGAATTGTGTCTTCACA+TGG | - | chr1_3:5705815-5705834 | None:intergenic | 30.0% | |
| GAGCTTGCATTGTAATAAAT+AGG | - | chr1_3:5705844-5705863 | None:intergenic | 30.0% | |
| !! | ACATAAGTTGGTTGTGTTTA+TGG | + | chr1_3:5705872-5705891 | Msa0099510:intron | 30.0% |
| ! | AGGGTGAGTTTCTTTTAATA+CGG | - | chr1_3:5706003-5706022 | None:intergenic | 30.0% |
| AAATAAGGAAGCAATATGTG+TGG | + | chr1_3:5706055-5706074 | Msa0099510:CDS | 30.0% | |
| TATACTCAACCCATGAAAAT+CGG | - | chr1_3:5706244-5706263 | None:intergenic | 30.0% | |
| AAATAAGTGGGAACAAGAAT+GGG | + | chr1_3:5706340-5706359 | Msa0099510:CDS | 30.0% | |
| CATTTAAGAAGTCCTTGTTA+GGG | - | chr1_3:5706431-5706450 | None:intergenic | 30.0% | |
| AAATAAGTGATGTGTCATGT+GGG | - | chr1_3:5706457-5706476 | None:intergenic | 30.0% | |
| TAAATAAGTGATGTGTCATG+TGG | - | chr1_3:5706458-5706477 | None:intergenic | 30.0% | |
| AACAGTGAAGAACCTGAAAA+TGG | - | chr1_3:5703367-5703386 | None:intergenic | 35.0% | |
| ATCGTTCTTCACTTTGTTCA+AGG | + | chr1_3:5703395-5703414 | Msa0099510:CDS | 35.0% | |
| AATTAAAAAAGGCAGTGTCG+GGG | - | chr1_3:5703621-5703640 | None:intergenic | 35.0% | |
| CTTAATAGCCCCAATTCAAA+AGG | - | chr1_3:5703821-5703840 | None:intergenic | 35.0% | |
| ! | CTTTTGAATTGGGGCTATTA+AGG | + | chr1_3:5703819-5703838 | Msa0099510:intron | 35.0% |
| CAACAAAAACGAAGTTGCTA+AGG | + | chr1_3:5704046-5704065 | Msa0099510:CDS | 35.0% | |
| ! | TAACTTTTCCGTATAGTAGG+TGG | + | chr1_3:5704336-5704355 | Msa0099510:intron | 35.0% |
| ATGAGTTATACTGTTACGAC+TGG | - | chr1_3:5704676-5704695 | None:intergenic | 35.0% | |
| AACTCATCTCCAACCATAAA+GGG | - | chr1_3:5704706-5704725 | None:intergenic | 35.0% | |
| TAACTCATCTCCAACCATAA+AGG | - | chr1_3:5704707-5704726 | None:intergenic | 35.0% | |
| AATGATCTGTTTCAGAGGTT+TGG | + | chr1_3:5704741-5704760 | Msa0099510:intron | 35.0% | |
| ATGATCTGTTTCAGAGGTTT+GGG | + | chr1_3:5704742-5704761 | Msa0099510:intron | 35.0% | |
| ! | AAATGACCCGTTTTACTCTA+AGG | + | chr1_3:5704801-5704820 | Msa0099510:intron | 35.0% |
| ! | AATGACCCGTTTTACTCTAA+GGG | + | chr1_3:5704802-5704821 | Msa0099510:intron | 35.0% |
| TTCTGACCCTTAGAGTAAAA+CGG | - | chr1_3:5704811-5704830 | None:intergenic | 35.0% | |
| ! | GAAGAAGTGCAAAGAATAGA+GGG | + | chr1_3:5704855-5704874 | Msa0099510:intron | 35.0% |
| !! | AATGAAATGGGCTGAAAGTA+TGG | - | chr1_3:5704947-5704966 | None:intergenic | 35.0% |
| TGGGCTAAATTTCACTAGTA+TGG | - | chr1_3:5705427-5705446 | None:intergenic | 35.0% | |
| GTTCCTAAGAAGCAAAAAGT+AGG | + | chr1_3:5705634-5705653 | Msa0099510:CDS | 35.0% | |
| CACAACCAACTTATGTGAAA+GGG | - | chr1_3:5705868-5705887 | None:intergenic | 35.0% | |
| ACACAACCAACTTATGTGAA+AGG | - | chr1_3:5705869-5705888 | None:intergenic | 35.0% | |
| !! | TAAGTTGGTTGTGTTTATGG+TGG | + | chr1_3:5705875-5705894 | Msa0099510:intron | 35.0% |
| ATATTAATATCCAACCCCAC+AGG | + | chr1_3:5706209-5706228 | Msa0099510:intron | 35.0% | |
| !!! | AAAGCATTGCCGATTTTCAT+GGG | + | chr1_3:5706232-5706251 | Msa0099510:CDS | 35.0% |
| !! | TTTACTGGTTGATAATGACG+TGG | + | chr1_3:5706290-5706309 | Msa0099510:CDS | 35.0% |
| CACTTATTTCATCAGCTCTT+GGG | - | chr1_3:5706329-5706348 | None:intergenic | 35.0% | |
| CAAGAGCTGATGAAATAAGT+GGG | + | chr1_3:5706328-5706347 | Msa0099510:CDS | 35.0% | |
| GAAATAAGTGGGAACAAGAA+TGG | + | chr1_3:5706339-5706358 | Msa0099510:CDS | 35.0% | |
| ! | AGTTATTAGAGCATCCACAA+TGG | + | chr1_3:5706400-5706419 | Msa0099510:three_prime_UTR | 35.0% |
| CCATTTAAGAAGTCCTTGTT+AGG | - | chr1_3:5706432-5706451 | None:intergenic | 35.0% | |
| CCTAACAAGGACTTCTTAAA+TGG | + | chr1_3:5706429-5706448 | Msa0099510:three_prime_UTR | 35.0% | |
| AATAAGTGATGTGTCATGTG+GGG | - | chr1_3:5706456-5706475 | None:intergenic | 35.0% | |
| CCTTATTAGTGTATTGCCAT+TGG | - | chr1_3:5706521-5706540 | None:intergenic | 35.0% | |
| CCAATGGCAATACACTAATA+AGG | + | chr1_3:5706518-5706537 | Msa0099510:three_prime_UTR | 35.0% | |
| TTTCTCTCGTATTGCGTTTC+TGG | + | chr1_3:5703266-5703285 | Msa0099510:CDS | 40.0% | |
| TCATACGTCCACCTACTATA+CGG | - | chr1_3:5704347-5704366 | None:intergenic | 40.0% | |
| ACTCATGACAATGCCCTTTA+TGG | + | chr1_3:5704690-5704709 | Msa0099510:intron | 40.0% | |
| ATGACAATGCCCTTTATGGT+TGG | + | chr1_3:5704694-5704713 | Msa0099510:intron | 40.0% | |
| GGTTGAATGATCTGTTTCAG+AGG | + | chr1_3:5704736-5704755 | Msa0099510:intron | 40.0% | |
| TTAGAAGAGTTACAAGGCTC+AGG | + | chr1_3:5704773-5704792 | Msa0099510:intron | 40.0% | |
| TCTGACCCTTAGAGTAAAAC+GGG | - | chr1_3:5704810-5704829 | None:intergenic | 40.0% | |
| ! | TTACTCTAAGGGTCAGAACA+AGG | + | chr1_3:5704813-5704832 | Msa0099510:intron | 40.0% |
| ! | GGAAGAAGTGCAAAGAATAG+AGG | + | chr1_3:5704854-5704873 | Msa0099510:intron | 40.0% |
| TGCAAAGAATAGAGGGCTTT+GGG | + | chr1_3:5704862-5704881 | Msa0099510:intron | 40.0% | |
| !!! | CTCCCTACTTTTTGCTTCTT+AGG | - | chr1_3:5705640-5705659 | None:intergenic | 40.0% |
| ! | TCCTTTTGCTTCTCAGTAAG+AGG | - | chr1_3:5705676-5705695 | None:intergenic | 40.0% |
| GTGGTATTGTTGCCATACTT+GGG | + | chr1_3:5705894-5705913 | Msa0099510:intron | 40.0% | |
| TGGGATAAGTTTCCCAAGTA+TGG | - | chr1_3:5705909-5705928 | None:intergenic | 40.0% | |
| TAAGGAAGCAATATGTGTGG+TGG | + | chr1_3:5706058-5706077 | Msa0099510:CDS | 40.0% | |
| TTGCCTTACGAACACAACAA+GGG | - | chr1_3:5706092-5706111 | None:intergenic | 40.0% | |
| !!! | GAAAGCATTGCCGATTTTCA+TGG | + | chr1_3:5706231-5706250 | Msa0099510:CDS | 40.0% |
| TAATGACGTGGCTACTGATA+TGG | + | chr1_3:5706302-5706321 | Msa0099510:CDS | 40.0% | |
| CCACTTATTTCATCAGCTCT+TGG | - | chr1_3:5706330-5706349 | None:intergenic | 40.0% | |
| CCAAGAGCTGATGAAATAAG+TGG | + | chr1_3:5706327-5706346 | Msa0099510:CDS | 40.0% | |
| ! | GCTCTTCCTTTTCTTCTTCT+AGG | - | chr1_3:5706371-5706390 | None:intergenic | 40.0% |
| TTGTTAGGGAACTACCATTG+TGG | - | chr1_3:5706417-5706436 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr1_3:5706416-5706435 | Msa0099510:three_prime_UTR | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr1_3:5706500-5706519 | None:intergenic | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | + | chr1_3:5706502-5706521 | Msa0099510:three_prime_UTR | 40.0% | |
| !! | CGATAAATTGGTGGGTTACG+CGG | - | chr1_3:5703205-5703224 | None:intergenic | 45.0% |
| TTGGTTGCCGATATTCACTC+AGG | + | chr1_3:5703241-5703260 | Msa0099510:CDS | 45.0% | |
| !! | TCTCGTATTGCGTTTCTGGT+TGG | + | chr1_3:5703270-5703289 | Msa0099510:CDS | 45.0% |
| CACCACTCGTTCTTCATGTT+AGG | + | chr1_3:5703311-5703330 | Msa0099510:CDS | 45.0% | |
| TGCCTAACATGAAGAACGAG+TGG | - | chr1_3:5703316-5703335 | None:intergenic | 45.0% | |
| TGCCTAGAATTAAGCATGCC+AGG | + | chr1_3:5704163-5704182 | Msa0099510:intron | 45.0% | |
| CTCCTGGCATGCTTAATTCT+AGG | - | chr1_3:5704168-5704187 | None:intergenic | 45.0% | |
| ACTGGAATCACAGGATCGAT+TGG | - | chr1_3:5704658-5704677 | None:intergenic | 45.0% | |
| ACTGTTACGACTGGAATCAC+AGG | - | chr1_3:5704667-5704686 | None:intergenic | 45.0% | |
| GGAGATGAGTTACAGATTGC+AGG | + | chr1_3:5704715-5704734 | Msa0099510:intron | 45.0% | |
| GTGCAAAGAATAGAGGGCTT+TGG | + | chr1_3:5704861-5704880 | Msa0099510:intron | 45.0% | |
| !! | AAGAATAGAGGGCTTTGGGA+AGG | + | chr1_3:5704866-5704885 | Msa0099510:intron | 45.0% |
| !! | AGAATAGAGGGCTTTGGGAA+GGG | + | chr1_3:5704867-5704886 | Msa0099510:intron | 45.0% |
| GCCTCTTACTGAGAAGCAAA+AGG | + | chr1_3:5705672-5705691 | Msa0099510:CDS | 45.0% | |
| GCTCACCCTTTCACATAAGT+TGG | + | chr1_3:5705860-5705879 | Msa0099510:intron | 45.0% | |
| GGTGGTATTGTTGCCATACT+TGG | + | chr1_3:5705893-5705912 | Msa0099510:intron | 45.0% | |
| ! | CAACCCTTGTTGTGTTCGTA+AGG | + | chr1_3:5706086-5706105 | Msa0099510:intron | 45.0% |
| CTTGCCTTACGAACACAACA+AGG | - | chr1_3:5706093-5706112 | None:intergenic | 45.0% | |
| AATCGGCAATGCTTTCCTGT+GGG | - | chr1_3:5706227-5706246 | None:intergenic | 45.0% | |
| AAATCGGCAATGCTTTCCTG+TGG | - | chr1_3:5706228-5706247 | None:intergenic | 45.0% | |
| TAGCAAGATCTCGCGTAAGA+AGG | + | chr1_3:5706266-5706285 | Msa0099510:CDS | 45.0% | |
| ! | CTCGCGTAAGAAGGTTTTAC+TGG | + | chr1_3:5706275-5706294 | Msa0099510:CDS | 45.0% |
| AAGTGGGAACAAGAATGGGA+TGG | + | chr1_3:5706344-5706363 | Msa0099510:CDS | 45.0% | |
| AGTGGGAACAAGAATGGGAT+GGG | + | chr1_3:5706345-5706364 | Msa0099510:CDS | 45.0% | |
| GATGGGCCTAGAAGAAGAAA+AGG | + | chr1_3:5706362-5706381 | Msa0099510:CDS | 45.0% | |
| TTTATGCAAGTGGGACCAAG+TGG | + | chr1_3:5706655-5706674 | Msa0099510:three_prime_UTR | 45.0% | |
| !! | TATTATTATTACTATTATTA+AGG | + | chr1_3:5703899-5703918 | Msa0099510:intron | 5.0% |
| !! | AAATAATAGAAATATAAAAT+GGG | - | chr1_3:5705928-5705947 | None:intergenic | 5.0% |
| !! | AAAATAATAGAAATATAAAA+TGG | - | chr1_3:5705929-5705948 | None:intergenic | 5.0% |
| AACACGTGTCGTACAGGTGT+CGG | - | chr1_3:5704192-5704211 | None:intergenic | 50.0% | |
| ACACCTGTACGACACGTGTT+AGG | + | chr1_3:5704192-5704211 | Msa0099510:intron | 50.0% | |
| TTGCCTAACACGTGTCGTAC+AGG | - | chr1_3:5704198-5704217 | None:intergenic | 50.0% | |
| GTAGGTGGACGTATGACATG+AGG | + | chr1_3:5704351-5704370 | Msa0099510:intron | 50.0% | |
| TGGGGGGTTATGCACATAAG+TGG | + | chr1_3:5704897-5704916 | Msa0099510:intron | 50.0% | |
| GGGGGGTTATGCACATAAGT+GGG | + | chr1_3:5704898-5704917 | Msa0099510:intron | 50.0% | |
| !!! | GCTGTTTTTTGAGCGACGCT+CGG | - | chr1_3:5705106-5705125 | None:intergenic | 50.0% |
| ATCGGCAATGCTTTCCTGTG+GGG | - | chr1_3:5706226-5706245 | None:intergenic | 50.0% | |
| !! | ATAGAGGGCTTTGGGAAGGG+AGG | + | chr1_3:5704870-5704889 | Msa0099510:intron | 55.0% |
| !! | TAGAGGGCTTTGGGAAGGGA+GGG | + | chr1_3:5704871-5704890 | Msa0099510:intron | 55.0% |
| !! | CTTTGGGAAGGGAGGGCATT+GGG | + | chr1_3:5704878-5704897 | Msa0099510:intron | 55.0% |
| !! | TTTGGGAAGGGAGGGCATTG+GGG | + | chr1_3:5704879-5704898 | Msa0099510:intron | 55.0% |
| GCAATGCTTTCCTGTGGGGT+TGG | - | chr1_3:5706222-5706241 | None:intergenic | 55.0% | |
| !! | TCGTACAGGTGTCGGACTCC+TGG | - | chr1_3:5704184-5704203 | None:intergenic | 60.0% |
| !! | GCTTTGGGAAGGGAGGGCAT+TGG | + | chr1_3:5704877-5704896 | Msa0099510:intron | 60.0% |
| !! | TTGGGAAGGGAGGGCATTGG+GGG | + | chr1_3:5704880-5704899 | Msa0099510:intron | 60.0% |
| !! | TGGGAAGGGAGGGCATTGGG+GGG | + | chr1_3:5704881-5704900 | Msa0099510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 5703197 | 5706707 | 5703197 | ID=Msa0099510;Name=Msa0099510 |
| chr1_3 | mRNA | 5703197 | 5706707 | 5703197 | ID=Msa0099510-mRNA-1;Parent=Msa0099510;Name=Msa0099510-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.8|0.66|1|0.4|0.66|6|312|233 |
| chr1_3 | exon | 5703197 | 5703416 | 5703197 | ID=Msa0099510-mRNA-1:exon:2171;Parent=Msa0099510-mRNA-1 |
| chr1_3 | exon | 5704018 | 5704119 | 5704018 | ID=Msa0099510-mRNA-1:exon:2172;Parent=Msa0099510-mRNA-1 |
| chr1_3 | exon | 5705097 | 5705159 | 5705097 | ID=Msa0099510-mRNA-1:exon:2173;Parent=Msa0099510-mRNA-1 |
| chr1_3 | exon | 5705593 | 5705700 | 5705593 | ID=Msa0099510-mRNA-1:exon:2174;Parent=Msa0099510-mRNA-1 |
| chr1_3 | exon | 5706055 | 5706098 | 5706055 | ID=Msa0099510-mRNA-1:exon:2175;Parent=Msa0099510-mRNA-1 |
| chr1_3 | exon | 5706231 | 5706707 | 5706231 | ID=Msa0099510-mRNA-1:exon:2176;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5703197 | 5703416 | 5703197 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5704018 | 5704119 | 5704018 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5705097 | 5705159 | 5705097 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5705593 | 5705700 | 5705593 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5706055 | 5706098 | 5706055 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | CDS | 5706231 | 5706395 | 5706231 | ID=Msa0099510-mRNA-1:cds;Parent=Msa0099510-mRNA-1 |
| chr1_3 | three_prime_UTR | 5706396 | 5706707 | 5706396 | ID=Msa0099510-mRNA-1:three_prime_utr;Parent=Msa0099510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
