Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198940 | XP_013463066.1 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198940 | sp|Q8VWK4|TRB1_ARATH | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.65e-87 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198940 | A0A072VG04 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0198940 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0198940 | -0.823322 | 1.474217e-53 | -8.615850e-47 |
| Msa0000590 | Msa0198940 | 0.824468 | 7.940439e-54 | -8.615850e-47 |
| Msa0026660 | Msa0198940 | 0.823273 | 1.513681e-53 | -8.615850e-47 |
| Msa0027580 | Msa0198940 | 0.807825 | 4.184197e-50 | -8.615850e-47 |
| Msa0036370 | Msa0198940 | 0.851067 | 1.129879e-60 | -8.615850e-47 |
| Msa0043730 | Msa0198940 | 0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0055100 | Msa0198940 | 0.802702 | 4.948469e-49 | -8.615850e-47 |
| Msa0065650 | Msa0198940 | 0.804736 | 1.872289e-49 | -8.615850e-47 |
| Msa0072170 | Msa0198940 | 0.822527 | 2.258152e-53 | -8.615850e-47 |
| Msa0075340 | Msa0198940 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
| Msa0085720 | Msa0198940 | 0.812826 | 3.486815e-51 | -8.615850e-47 |
| Msa0090030 | Msa0198940 | 0.830774 | 2.429558e-55 | -8.615850e-47 |
| Msa0101180 | Msa0198940 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0108870 | Msa0198940 | 0.810321 | 1.221812e-50 | -8.615850e-47 |
| Msa0120540 | Msa0198940 | 0.822680 | 2.081194e-53 | -8.615850e-47 |
| Msa0130520 | Msa0198940 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0140400 | Msa0198940 | 0.817356 | 3.440474e-52 | -8.615850e-47 |
| Msa0140520 | Msa0198940 | -0.805139 | 1.541708e-49 | -8.615850e-47 |
| Msa0145150 | Msa0198940 | 0.816501 | 5.353546e-52 | -8.615850e-47 |
| Msa0173330 | Msa0198940 | 0.802949 | 4.400927e-49 | -8.615850e-47 |
| Msa0176330 | Msa0198940 | 0.810040 | 1.404589e-50 | -8.615850e-47 |
| Msa0177230 | Msa0198940 | 0.815486 | 9.018282e-52 | -8.615850e-47 |
| Msa0186770 | Msa0198940 | 0.806374 | 8.487034e-50 | -8.615850e-47 |
| Msa0193600 | Msa0198940 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0198940 | Msa0208810 | 0.843947 | 1.024086e-58 | -8.615850e-47 |
| Msa0198940 | Msa0212750 | -0.827380 | 1.615272e-54 | -8.615850e-47 |
| Msa0198940 | Msa0239940 | 0.826456 | 2.686629e-54 | -8.615850e-47 |
| Msa0198940 | Msa0241740 | 0.942193 | 1.107184e-101 | -8.615850e-47 |
| Msa0198940 | Msa0252240 | 0.809872 | 1.526551e-50 | -8.615850e-47 |
| Msa0198940 | Msa0266210 | 0.833564 | 4.959321e-56 | -8.615850e-47 |
| Msa0198940 | Msa0273650 | 0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0198940 | Msa0279770 | 0.816799 | 4.590997e-52 | -8.615850e-47 |
| Msa0198940 | Msa0287670 | 0.838645 | 2.542469e-57 | -8.615850e-47 |
| Msa0198940 | Msa0288730 | 0.805229 | 1.476667e-49 | -8.615850e-47 |
| Msa0198940 | Msa0289400 | 0.800396 | 1.469722e-48 | -8.615850e-47 |
| Msa0198940 | Msa0308200 | 0.817422 | 3.325810e-52 | -8.615850e-47 |
| Msa0198940 | Msa0308220 | 0.838852 | 2.247360e-57 | -8.615850e-47 |
| Msa0198940 | Msa0319330 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0198940 | Msa0320610 | 0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa0198940 | Msa0321170 | 0.804868 | 1.756742e-49 | -8.615850e-47 |
| Msa0198940 | Msa0362060 | 0.803573 | 3.269074e-49 | -8.615850e-47 |
| Msa0198940 | Msa0363170 | 0.842660 | 2.257676e-58 | -8.615850e-47 |
| Msa0198940 | Msa0377530 | 0.836528 | 8.879259e-57 | -8.615850e-47 |
| Msa0198940 | Msa0387910 | 0.831056 | 2.071681e-55 | -8.615850e-47 |
| Msa0198940 | Msa0403190 | 0.826111 | 3.246062e-54 | -8.615850e-47 |
| Msa0198940 | Msa0404700 | 0.848495 | 5.910319e-60 | -8.615850e-47 |
| Msa0198940 | Msa0419520 | 0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0198940 | Msa0421260 | 0.816139 | 6.449029e-52 | -8.615850e-47 |
| Msa0198940 | Msa0426810 | 0.853667 | 2.053044e-61 | -8.615850e-47 |
| Msa0198940 | Msa0439890 | 0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0198940 | Msa0449820 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa0198940 | Msa0461590 | 0.806336 | 8.643669e-50 | -8.615850e-47 |
| Msa0198940 | Msa0462540 | 0.837833 | 4.115178e-57 | -8.615850e-47 |
| Msa0198940 | Msa0464900 | 0.809221 | 2.105966e-50 | -8.615850e-47 |
| Msa0198940 | Msa0467220 | 0.802988 | 4.319400e-49 | -8.615850e-47 |
| Msa0198940 | Msa0493920 | 0.807200 | 5.678398e-50 | -8.615850e-47 |
| Msa0198940 | Msa0517490 | 0.828417 | 9.096181e-55 | -8.615850e-47 |
| Msa0198940 | Msa0524600 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
| Msa0198940 | Msa0527910 | 0.818760 | 1.656395e-52 | -8.615850e-47 |
| Msa0198940 | Msa0534080 | 0.810627 | 1.049211e-50 | -8.615850e-47 |
| Msa0198940 | Msa0536790 | 0.805419 | 1.347207e-49 | -8.615850e-47 |
| Msa0198940 | Msa0578090 | 0.824228 | 9.042095e-54 | -8.615850e-47 |
| Msa0198940 | Msa0579370 | 0.816529 | 5.276472e-52 | -8.615850e-47 |
| Msa0198940 | Msa0586850 | 0.803870 | 2.835710e-49 | -8.615850e-47 |
| Msa0198940 | Msa0597000 | 0.810849 | 9.392487e-51 | -8.615850e-47 |
| Msa0198940 | Msa0603670 | 0.828146 | 1.056963e-54 | -8.615850e-47 |
| Msa0198940 | Msa0609970 | 0.810590 | 1.068583e-50 | -8.615850e-47 |
| Msa0198940 | Msa0610500 | 0.817739 | 2.820689e-52 | -8.615850e-47 |
| Msa0198940 | Msa0614990 | 0.841394 | 4.881249e-58 | -8.615850e-47 |
| Msa0198940 | Msa0619180 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0198940 | Msa0619920 | 0.806983 | 6.310016e-50 | -8.615850e-47 |
| Msa0198940 | Msa0626680 | 0.824243 | 8.972670e-54 | -8.615850e-47 |
| Msa0198940 | Msa0626940 | 0.813181 | 2.914877e-51 | -8.615850e-47 |
| Msa0198940 | Msa0650620 | 0.801939 | 7.106089e-49 | -8.615850e-47 |
| Msa0198940 | Msa0651150 | 0.834395 | 3.072186e-56 | -8.615850e-47 |
| Msa0198940 | Msa0653320 | -0.815511 | 8.905287e-52 | -8.615850e-47 |
| Msa0198940 | Msa0659140 | 0.823505 | 1.336022e-53 | -8.615850e-47 |
| Msa0198940 | Msa0664760 | 0.814423 | 1.552138e-51 | -8.615850e-47 |
| Msa0198940 | Msa0679550 | 0.803103 | 4.088870e-49 | -8.615850e-47 |
| Msa0198940 | Msa0693790 | 0.840647 | 7.665271e-58 | -8.615850e-47 |
| Msa0198940 | Msa0696420 | 0.822743 | 2.012139e-53 | -8.615850e-47 |
| Msa0198940 | Msa0700230 | 0.812456 | 4.202295e-51 | -8.615850e-47 |
| Msa0198940 | Msa0704800 | 0.810120 | 1.349533e-50 | -8.615850e-47 |
| Msa0198940 | Msa0705600 | 0.813847 | 2.080449e-51 | -8.615850e-47 |
| Msa0198940 | Msa0706390 | 0.806217 | 9.155068e-50 | -8.615850e-47 |
| Msa0198940 | Msa0713350 | 0.801897 | 7.247182e-49 | -8.615850e-47 |
| Msa0198940 | Msa0720370 | 0.810276 | 1.249180e-50 | -8.615850e-47 |
| Msa0198940 | Msa0735310 | 0.803800 | 2.932613e-49 | -8.615850e-47 |
| Msa0198940 | Msa0761890 | 0.803507 | 3.372699e-49 | -8.615850e-47 |
| Msa0198940 | Msa0814250 | 0.822992 | 1.760453e-53 | -8.615850e-47 |
| Msa0198940 | Msa0817260 | 0.815449 | 9.191399e-52 | -8.615850e-47 |
| Msa0198940 | Msa0820530 | -0.817507 | 3.181311e-52 | -8.615850e-47 |
| Msa0198940 | Msa0837650 | 0.822975 | 1.776963e-53 | -8.615850e-47 |
| Msa0198940 | Msa0869010 | 0.815061 | 1.121232e-51 | -8.615850e-47 |
| Msa0198940 | Msa0876860 | -0.823036 | 1.719057e-53 | -8.615850e-47 |
| Msa0198940 | Msa0879860 | 0.807450 | 5.023975e-50 | -8.615850e-47 |
| Msa0198940 | Msa0895310 | 0.826245 | 3.015076e-54 | -8.615850e-47 |
| Msa0198940 | Msa0921870 | 0.805573 | 1.250727e-49 | -8.615850e-47 |
| Msa0198940 | Msa0937330 | 0.822066 | 2.889568e-53 | -8.615850e-47 |
| Msa0198940 | Msa0943270 | 0.808897 | 2.470639e-50 | -8.615850e-47 |
| Msa0198940 | Msa0944730 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
| Msa0198940 | Msa0959010 | 0.802006 | 6.885145e-49 | -8.615850e-47 |
| Msa0198940 | Msa1036740 | 0.821899 | 3.159007e-53 | -8.615850e-47 |
| Msa0198940 | Msa1073400 | 0.812253 | 4.653378e-51 | -8.615850e-47 |
| Msa0198940 | Msa1083880 | 0.807034 | 6.154381e-50 | -8.615850e-47 |
| Msa0198940 | Msa1088290 | 0.802216 | 6.232402e-49 | -8.615850e-47 |
| Msa0198940 | Msa1094430 | 0.812096 | 5.035653e-51 | -8.615850e-47 |
| Msa0198940 | Msa1113880 | 0.829636 | 4.608103e-55 | -8.615850e-47 |
| Msa0198940 | Msa1144970 | 0.818928 | 1.517437e-52 | -8.615850e-47 |
| Msa0198940 | Msa1163870 | 0.811345 | 7.335275e-51 | -8.615850e-47 |
| Msa0198940 | Msa1174310 | 0.835691 | 1.447847e-56 | -8.615850e-47 |
| Msa0198940 | Msa1176360 | 0.809170 | 2.160049e-50 | -8.615850e-47 |
| Msa0198940 | Msa1176980 | 0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0198940 | Msa1182630 | 0.802131 | 6.488454e-49 | -8.615850e-47 |
| Msa0198940 | Msa1182640 | 0.831836 | 1.331730e-55 | -8.615850e-47 |
| Msa0198940 | Msa1253810 | 0.819098 | 1.387938e-52 | -8.615850e-47 |
| Msa0198940 | Msa1272520 | 0.804671 | 1.931397e-49 | -8.615850e-47 |
| Msa0198940 | Msa1280620 | 0.819576 | 1.080042e-52 | -8.615850e-47 |
| Msa0198940 | Msa1294960 | 0.816186 | 6.297441e-52 | -8.615850e-47 |
| Msa0198940 | Msa1296300 | 0.827486 | 1.523763e-54 | -8.615850e-47 |
| Msa0198940 | Msa1310660 | 0.850117 | 2.089048e-60 | -8.615850e-47 |
| Msa0198940 | Msa1314770 | 0.829978 | 3.802725e-55 | -8.615850e-47 |
| Msa0198940 | Msa1317270 | 0.816803 | 4.581194e-52 | -8.615850e-47 |
| Msa0198940 | Msa1340830 | 0.818448 | 1.949914e-52 | -8.615850e-47 |
| Msa0198940 | Msa1350690 | 0.836371 | 9.729485e-57 | -8.615850e-47 |
| Msa0198940 | Msa1360280 | 0.814637 | 1.391951e-51 | -8.615850e-47 |
| Msa0198940 | Msa1363700 | 0.825020 | 5.885840e-54 | -8.615850e-47 |
| Msa0198940 | Msa1371090 | 0.805347 | 1.394710e-49 | -8.615850e-47 |
| Msa0198940 | Msa1372310 | 0.827078 | 1.908267e-54 | -8.615850e-47 |
| Msa0198940 | Msa1396940 | 0.804265 | 2.346646e-49 | -8.615850e-47 |
| Msa0198940 | Msa1422840 | 0.828591 | 8.254671e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198940 | MtrunA17_Chr2g0293381 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
| Msa0198940 | MtrunA17_Chr8g0384671 | 74.689 | 241 | 55 | 2 | 1 | 239 | 1 | 237 | 1.14e-126 | 363 |
| Msa0198940 | MtrunA17_Chr4g0054131 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 5.83e-64 | 203 |
| Msa0198940 | MtrunA17_Chr5g0401061 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 9.67e-64 | 202 |
| Msa0198940 | MtrunA17_Chr8g0383821 | 64.000 | 125 | 45 | 0 | 1 | 125 | 1 | 125 | 4.92e-52 | 167 |
| Msa0198940 | MtrunA17_Chr1g0195251 | 63.636 | 121 | 41 | 2 | 125 | 245 | 295 | 412 | 1.88e-39 | 143 |
| Msa0198940 | MtrunA17_Chr8g0342871 | 33.108 | 296 | 155 | 7 | 1 | 282 | 1 | 267 | 2.63e-32 | 120 |
| Msa0198940 | MtrunA17_Chr2g0329921 | 35.349 | 215 | 108 | 4 | 1 | 190 | 1 | 209 | 1.48e-28 | 111 |
| Msa0198940 | MtrunA17_Chr1g0166681 | 67.123 | 73 | 23 | 1 | 1 | 73 | 1 | 72 | 5.30e-27 | 104 |
| Msa0198940 | MtrunA17_Chr1g0195261 | 72.000 | 50 | 14 | 0 | 1 | 50 | 1 | 50 | 3.22e-20 | 82.0 |
| Msa0198940 | MtrunA17_Chr2g0293401 | 61.538 | 65 | 25 | 0 | 59 | 123 | 1 | 65 | 8.67e-19 | 79.0 |
| Msa0198940 | MtrunA17_Chr8g0383841 | 67.442 | 86 | 19 | 1 | 187 | 263 | 2 | 87 | 2.45e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198940 | AT1G49950.3 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0198940 | AT1G49950.1 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0198940 | AT1G49950.2 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.73e-88 | 265 |
| Msa0198940 | AT3G49850.1 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.77e-53 | 176 |
| Msa0198940 | AT3G49850.2 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.77e-53 | 176 |
| Msa0198940 | AT5G67580.2 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.77e-52 | 174 |
| Msa0198940 | AT5G67580.1 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.77e-52 | 174 |
| Msa0198940 | AT1G72740.2 | 37.056 | 197 | 121 | 2 | 1 | 197 | 1 | 194 | 5.43e-32 | 120 |
| Msa0198940 | AT1G72740.1 | 36.453 | 203 | 120 | 3 | 1 | 197 | 1 | 200 | 1.13e-29 | 114 |
| Msa0198940 | AT1G17520.4 | 38.342 | 193 | 112 | 2 | 1 | 187 | 1 | 192 | 2.25e-28 | 110 |
| Msa0198940 | AT1G17520.1 | 39.572 | 187 | 106 | 2 | 1 | 181 | 1 | 186 | 1.75e-27 | 108 |
| Msa0198940 | AT1G17520.3 | 38.144 | 194 | 112 | 3 | 1 | 187 | 1 | 193 | 5.84e-27 | 107 |
| Msa0198940 | AT1G17520.2 | 39.362 | 188 | 106 | 3 | 1 | 181 | 1 | 187 | 4.75e-26 | 104 |
| Msa0198940 | AT1G54260.1 | 45.205 | 73 | 40 | 0 | 120 | 192 | 2 | 74 | 3.68e-12 | 64.7 |
Find 94 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTAAATTCACATTAAA+TGG | 0.080322 | 2_1:+17694872 | None:intergenic |
| GGATTACATATGATATTATT+TGG | 0.094051 | 2_1:-17690494 | Msa0198940:three_prime_UTR |
| AGAGATATGCCGCAAATTTC+TGG | 0.156146 | 2_1:-17693822 | Msa0198940:CDS |
| AAGCCAAGATTTACCGTCTT+TGG | 0.203558 | 2_1:+17690576 | None:intergenic |
| AACCCATTTAATGTGAATTT+AGG | 0.205428 | 2_1:-17694875 | Msa0198940:five_prime_UTR |
| ACACCCATCAACATTATTAT+TGG | 0.217687 | 2_1:-17690864 | Msa0198940:CDS |
| CTATAACTTAATACATTAAT+AGG | 0.258059 | 2_1:-17690536 | Msa0198940:three_prime_UTR |
| TAGATATAGCTTCCATTATA+AGG | 0.267054 | 2_1:+17693088 | None:intergenic |
| TCATCATCACTTAGAGAAAA+AGG | 0.267733 | 2_1:+17693876 | None:intergenic |
| TATGGAAGAGCAAATAAAAT+TGG | 0.273546 | 2_1:+17690466 | None:intergenic |
| GGACATGTAGAAGATTCTTT+TGG | 0.291674 | 2_1:-17690515 | Msa0198940:three_prime_UTR |
| GTATTCTGTAGGACCATTAC+TGG | 0.323222 | 2_1:-17691959 | Msa0198940:intron |
| AATGAAAAGGGTGCATTATC+AGG | 0.328121 | 2_1:-17693934 | Msa0198940:CDS |
| GATTACATATGATATTATTT+GGG | 0.336628 | 2_1:-17690493 | Msa0198940:three_prime_UTR |
| AGCCAAGATTTACCGTCTTT+GGG | 0.343837 | 2_1:+17690577 | None:intergenic |
| TCAAGCATGGGGTGGGTAAA+TGG | 0.345523 | 2_1:-17694196 | Msa0198940:CDS |
| CCTTCCAATAATAATGTTGA+TGG | 0.370851 | 2_1:+17690860 | None:intergenic |
| TATAAAACATGGTTAAATTC+AGG | 0.375074 | 2_1:+17694155 | None:intergenic |
| TTATTGGAAGGGAGGCAAAA+AGG | 0.396790 | 2_1:-17690848 | Msa0198940:CDS |
| TCGGTCAAATGTTGATCTAA+AGG | 0.406182 | 2_1:-17694129 | Msa0198940:intron |
| AATACACGAGGACAACTCTA+TGG | 0.413485 | 2_1:-17693907 | Msa0198940:CDS |
| GTCCTAAATTCACATTAAAT+GGG | 0.419607 | 2_1:+17694873 | None:intergenic |
| GGGTTGTTGGATAGGATAAA+TGG | 0.426577 | 2_1:-17694013 | Msa0198940:intron |
| TTCAGGTGAAGCGCAGGTAT+AGG | 0.433823 | 2_1:-17690922 | Msa0198940:intron |
| TTCTAATTCTAAATCGATCT+CGG | 0.439248 | 2_1:+17690781 | None:intergenic |
| CACCCAAAGACGGTAAATCT+TGG | 0.442023 | 2_1:-17690579 | Msa0198940:exon |
| TTCTAAATCGATCTCGGACT+TGG | 0.444342 | 2_1:+17690787 | None:intergenic |
| CTCTTCAGCCTCCGCCATGA+GGG | 0.446885 | 2_1:+17690691 | None:intergenic |
| TTGTAGAAGCTGAAAGGAAA+AGG | 0.451081 | 2_1:-17690616 | Msa0198940:CDS |
| CAGGTTGGATAACCTTATAA+TGG | 0.457504 | 2_1:-17693100 | Msa0198940:CDS |
| GGAGGCAGAGGCTGCAGAAG+CGG | 0.467500 | 2_1:-17690660 | Msa0198940:CDS |
| AATCGATCTCGGACTTGGTA+TGG | 0.471610 | 2_1:+17690792 | None:intergenic |
| CTTCCTCTGTCTGAATATGC+TGG | 0.476422 | 2_1:+17690887 | None:intergenic |
| AGCCAAAGGGAGCAATGAAA+AGG | 0.479925 | 2_1:-17693947 | Msa0198940:CDS |
| CCTCATGGCGGAGGCTGAAG+AGG | 0.487598 | 2_1:-17690690 | Msa0198940:CDS |
| AACCATTGCTTCTTTCATTG+AGG | 0.488576 | 2_1:-17693034 | Msa0198940:intron |
| TGCTCGAGCAGTTGCTGAAG+CGG | 0.494217 | 2_1:-17690717 | Msa0198940:CDS |
| GAGGAATCCGCACTTAAAGC+TGG | 0.499504 | 2_1:-17694224 | Msa0198940:CDS |
| CTGAAGTATCTTACATCTCG+TGG | 0.499992 | 2_1:-17691900 | Msa0198940:CDS |
| GGCAGAGGCTGCAGAAGCGG+AGG | 0.501552 | 2_1:-17690657 | Msa0198940:CDS |
| AGCGGAAGCCCTCATGGCGG+AGG | 0.503203 | 2_1:-17690699 | Msa0198940:CDS |
| CCTCTTCAGCCTCCGCCATG+AGG | 0.504586 | 2_1:+17690690 | None:intergenic |
| TGTATTATGCCCTCGCAAGC+AGG | 0.507530 | 2_1:+17690440 | None:intergenic |
| CCTCACCGCTGCGTTGTGAT+CGG | 0.511101 | 2_1:+17694802 | None:intergenic |
| TGCTGAAGCGGAAGCCCTCA+TGG | 0.511274 | 2_1:-17690705 | Msa0198940:CDS |
| ATAGAGTTGTCCTCGTGTAT+TGG | 0.517777 | 2_1:+17693909 | None:intergenic |
| GGCTGCCTCTTGTGCAGACA+TGG | 0.522460 | 2_1:+17690748 | None:intergenic |
| ATATCTAGCTTGAATGAACT+TGG | 0.526305 | 2_1:-17693072 | Msa0198940:CDS |
| ATCTCGTGGAAAACTGATCA+AGG | 0.527774 | 2_1:-17691886 | Msa0198940:intron |
| AACTGCTCGAGCAGCACATG+CGG | 0.528875 | 2_1:+17690727 | None:intergenic |
| TTCCATAAAACCTGCTTGCG+AGG | 0.531201 | 2_1:-17690450 | Msa0198940:three_prime_UTR |
| GGCAAGTGGATGGGCTTCGA+GGG | 0.532126 | 2_1:-17693973 | Msa0198940:CDS |
| TATTCTGTAGGACCATTACT+GGG | 0.533689 | 2_1:-17691958 | Msa0198940:intron |
| TTATATTTCAGGTGAAGCGC+AGG | 0.535455 | 2_1:-17690928 | Msa0198940:intron |
| AAGCTGGAGTTATCAAGCAT+GGG | 0.537538 | 2_1:-17694208 | Msa0198940:CDS |
| CTGTCTGAATATGCTGGAGT+AGG | 0.541994 | 2_1:+17690893 | None:intergenic |
| AAAGCTGGAGTTATCAAGCA+TGG | 0.542386 | 2_1:-17694209 | Msa0198940:CDS |
| TGGCAAGTGGATGGGCTTCG+AGG | 0.542668 | 2_1:-17693974 | Msa0198940:CDS |
| CCATCAACATTATTATTGGA+AGG | 0.543532 | 2_1:-17690860 | Msa0198940:CDS |
| AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 2_1:-17690672 | Msa0198940:CDS |
| AGTCAGCAGGTGCCCAGTAA+TGG | 0.551122 | 2_1:+17691946 | None:intergenic |
| TCCATAAAACCTGCTTGCGA+GGG | 0.556748 | 2_1:-17690449 | Msa0198940:three_prime_UTR |
| CAACATTATTATTGGAAGGG+AGG | 0.564310 | 2_1:-17690856 | Msa0198940:CDS |
| CATCAACATTATTATTGGAA+GGG | 0.566044 | 2_1:-17690859 | Msa0198940:CDS |
| AAGGTCCATGTCTGCACAAG+AGG | 0.566181 | 2_1:-17690753 | Msa0198940:CDS |
| GCCAAAGGGAGCAATGAAAA+GGG | 0.571330 | 2_1:-17693946 | Msa0198940:CDS |
| TACCTCAATGAAAGAAGCAA+TGG | 0.571520 | 2_1:+17693032 | None:intergenic |
| TCTAGCTTGAATGAACTTGG+TGG | 0.579223 | 2_1:-17693069 | Msa0198940:CDS |
| TGAGCGTGATGGCAAGTGGA+TGG | 0.581001 | 2_1:-17693983 | Msa0198940:CDS |
| GAGCGTGATGGCAAGTGGAT+GGG | 0.581966 | 2_1:-17693982 | Msa0198940:CDS |
| GGAGTTATCAAGCATGGGGT+GGG | 0.587974 | 2_1:-17694203 | Msa0198940:CDS |
| CTTCCAATAATAATGTTGAT+GGG | 0.591104 | 2_1:+17690861 | None:intergenic |
| TTAGATCAACATTTGACCGA+AGG | 0.594489 | 2_1:+17694132 | None:intergenic |
| GGAGGCTGAAGAGGCAACAA+AGG | 0.596715 | 2_1:-17690681 | Msa0198940:CDS |
| TGGAGTTATCAAGCATGGGG+TGG | 0.597697 | 2_1:-17694204 | Msa0198940:CDS |
| GGCTTCGAGGGAGAAGCCAA+AGG | 0.598632 | 2_1:-17693961 | Msa0198940:CDS |
| GGCTGAAGAGGCAACAAAGG+AGG | 0.605389 | 2_1:-17690678 | Msa0198940:CDS |
| ATGGCGAAATTTGAGCGTGA+TGG | 0.606348 | 2_1:-17693994 | Msa0198940:CDS |
| AGAAGCGGAGGCAGATGCAA+TGG | 0.616552 | 2_1:-17690645 | Msa0198940:CDS |
| ATTAAGTTATAGTATGACAA+AGG | 0.618209 | 2_1:+17690547 | None:intergenic |
| AGCTGAAAGGAAAAGGCTGA+AGG | 0.619969 | 2_1:-17690609 | Msa0198940:CDS |
| GCTTCGAGGGAGAAGCCAAA+GGG | 0.621979 | 2_1:-17693960 | Msa0198940:CDS |
| GGTTAAATTCAGGATCCTTG+AGG | 0.623114 | 2_1:+17694165 | None:intergenic |
| AATTTGAGCGTGATGGCAAG+TGG | 0.631289 | 2_1:-17693987 | Msa0198940:CDS |
| ATATCTCTTGAAACTTGAAG+AGG | 0.637010 | 2_1:+17693837 | None:intergenic |
| TTGACCGAAGGTATAAAACA+TGG | 0.643379 | 2_1:+17694144 | None:intergenic |
| CCGATCACAACGCAGCGGTG+AGG | 0.645405 | 2_1:-17694802 | Msa0198940:intron |
| GATAACTCCAGCTTTAAGTG+CGG | 0.649462 | 2_1:+17694217 | None:intergenic |
| AGCTGGAGTTATCAAGCATG+GGG | 0.657193 | 2_1:-17694207 | Msa0198940:CDS |
| TAAATGGCGCACGATCCTCA+AGG | 0.683523 | 2_1:-17694180 | Msa0198940:CDS |
| CAGCGCCGATCACAACGCAG+CGG | 0.700024 | 2_1:-17694807 | Msa0198940:five_prime_UTR |
| ACTCCAGCATATTCAGACAG+AGG | 0.701760 | 2_1:-17690890 | Msa0198940:CDS |
| TTATCAGGCACCAATACACG+AGG | 0.743899 | 2_1:-17693919 | Msa0198940:CDS |
| TGAAGCGGAAGCCCTCATGG+CGG | 0.749745 | 2_1:-17690702 | Msa0198940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAAAATAATT+GGG | + | chr2_1:17691487-17691506 | None:intergenic | 0.0% |
| !!! | AATTTTTATAGATTTTGTTT+TGG | - | chr2_1:17690611-17690630 | Msa0198940:CDS | 10.0% |
| !!! | AATTTTTATAGATTTTGTTT+TGG | - | chr2_1:17690611-17690630 | Msa0198940:CDS | 10.0% |
| !! | AATATCTTAGAAAATTTATT+GGG | - | chr2_1:17692393-17692412 | Msa0198940:intron | 10.0% |
| !! | AATATCTTAGAAAATTTATT+GGG | - | chr2_1:17692393-17692412 | Msa0198940:intron | 10.0% |
| !!! | ATTTAGAATTAGAAAAAATA+AGG | - | chr2_1:17694484-17694503 | Msa0198940:intron | 10.0% |
| !!! | TTTATACCTATGATTTTTTT+GGG | + | chr2_1:17690359-17690378 | None:intergenic | 15.0% |
| !!! | ATTTATACCTATGATTTTTT+TGG | + | chr2_1:17690360-17690379 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTTGGAATTTTTT+AGG | - | chr2_1:17690622-17690641 | Msa0198940:CDS | 15.0% |
| !!! | TTTTGTTTTGGAATTTTTTA+GGG | - | chr2_1:17690623-17690642 | Msa0198940:CDS | 15.0% |
| !!! | AATTTTTTAGGGTTTTTTTT+TGG | - | chr2_1:17690634-17690653 | Msa0198940:CDS | 15.0% |
| !!! | ATTTTTTAGGGTTTTTTTTT+GGG | - | chr2_1:17690635-17690654 | Msa0198940:CDS | 15.0% |
| !! | GATATAGAGTATAATTATTT+CGG | - | chr2_1:17690761-17690780 | Msa0198940:CDS | 15.0% |
| !! | TAAATAAATGATTCCTTTAT+AGG | + | chr2_1:17692119-17692138 | None:intergenic | 15.0% |
| !! | GAATATCTTAGAAAATTTAT+TGG | - | chr2_1:17692392-17692411 | Msa0198940:intron | 15.0% |
| !! | GAATATCTTAGAAAATTTAT+TGG | - | chr2_1:17692392-17692411 | Msa0198940:intron | 15.0% |
| !!! | AATTTGAGATTTTATTTCAT+GGG | - | chr2_1:17694298-17694317 | Msa0198940:intron | 15.0% |
| !! | CTATAACTTAATACATTAAT+AGG | - | chr2_1:17694720-17694739 | Msa0198940:intron | 15.0% |
| !! | GATTACATATGATATTATTT+GGG | - | chr2_1:17694763-17694782 | Msa0198940:intron | 15.0% |
| !!! | TTTTTTAGGGTTTTTTTTTG+GGG | - | chr2_1:17690636-17690655 | Msa0198940:CDS | 20.0% |
| !! | AAACTAAAACTTTCCTATAT+GGG | + | chr2_1:17690827-17690846 | None:intergenic | 20.0% |
| !! | AAAACTAAAACTTTCCTATA+TGG | + | chr2_1:17690828-17690847 | None:intergenic | 20.0% |
| !!! | TATAGGAAAGTTTTAGTTTT+AGG | - | chr2_1:17690828-17690847 | Msa0198940:CDS | 20.0% |
| !! | ATTTGATGTATTTATGATGT+TGG | - | chr2_1:17690942-17690961 | Msa0198940:intron | 20.0% |
| !! | TATAAAACATGGTTAAATTC+AGG | + | chr2_1:17691104-17691123 | None:intergenic | 20.0% |
| !! | GTAATGAATTGAATTAATGT+TGG | - | chr2_1:17691186-17691205 | Msa0198940:intron | 20.0% |
| !! | TATTTATCTTGATCAACTAT+TGG | - | chr2_1:17691886-17691905 | Msa0198940:intron | 20.0% |
| !!! | AAATAATTTTATAGTGCAGT+CGG | - | chr2_1:17691947-17691966 | Msa0198940:CDS | 20.0% |
| !! | TTTGTACTAATCATAGAATA+TGG | + | chr2_1:17692427-17692446 | None:intergenic | 20.0% |
| !! | TTTGTACTAATCATAGAATA+TGG | + | chr2_1:17692427-17692446 | None:intergenic | 20.0% |
| !! | TTCTATGATTAGTACAAATA+TGG | - | chr2_1:17692429-17692448 | Msa0198940:intron | 20.0% |
| !! | TCTATGATTAGTACAAATAT+GGG | - | chr2_1:17692518-17692537 | Msa0198940:intron | 20.0% |
| !! | GATTGTAATTTATTACTCTA+GGG | + | chr2_1:17692711-17692730 | None:intergenic | 20.0% |
| !! | TGATTGTAATTTATTACTCT+AGG | + | chr2_1:17692712-17692731 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCTATACAATTCT+AGG | + | chr2_1:17692779-17692798 | None:intergenic | 20.0% |
| !!! | ATACACATCTATTTGAAATA+GGG | - | chr2_1:17694027-17694046 | Msa0198940:intron | 20.0% |
| !! | TTTAAGTCTACATTAGAAAA+TGG | + | chr2_1:17694154-17694173 | None:intergenic | 20.0% |
| !! | TAAATGTATAAGACTAAATC+AGG | + | chr2_1:17694217-17694236 | None:intergenic | 20.0% |
| !!! | CAATTTGAGATTTTATTTCA+TGG | - | chr2_1:17694297-17694316 | Msa0198940:intron | 20.0% |
| !! | ATTAAGTTATAGTATGACAA+AGG | + | chr2_1:17694712-17694731 | None:intergenic | 20.0% |
| !! | GGATTACATATGATATTATT+TGG | - | chr2_1:17694762-17694781 | Msa0198940:intron | 20.0% |
| !!! | TTCTAATCATTTTAGATGAT+CGG | + | chr2_1:17694857-17694876 | None:intergenic | 20.0% |
| ! | AAATGACCCAAAAAAATCAT+AGG | - | chr2_1:17690350-17690369 | Msa0198940:three_prime_UTR | 25.0% |
| ! | AACCCATTTAATGTGAATTT+AGG | - | chr2_1:17690381-17690400 | Msa0198940:three_prime_UTR | 25.0% |
| ! | GTCCTAAATTCACATTAAAT+GGG | + | chr2_1:17690386-17690405 | None:intergenic | 25.0% |
| ! | TGTCCTAAATTCACATTAAA+TGG | + | chr2_1:17690387-17690406 | None:intergenic | 25.0% |
| !!! | GTTTCTTGTGTTTTTGATTT+AGG | + | chr2_1:17690425-17690444 | None:intergenic | 25.0% |
| ! | TATGAAATGAAATCGGAAAA+AGG | + | chr2_1:17690496-17690515 | None:intergenic | 25.0% |
| ! | ATCGGAATATGAAATGAAAT+CGG | + | chr2_1:17690503-17690522 | None:intergenic | 25.0% |
| !!! | TTTTTAGGGTTTTTTTTTGG+GGG | - | chr2_1:17690637-17690656 | Msa0198940:CDS | 25.0% |
| !!! | CTTTGATCCAATGTATTTTT+TGG | - | chr2_1:17690798-17690817 | Msa0198940:CDS | 25.0% |
| !!! | TATTTTTTGGTTACCCATAT+AGG | - | chr2_1:17690811-17690830 | Msa0198940:CDS | 25.0% |
| ! | ATAAAACAATCAAAACTCGT+AGG | + | chr2_1:17690885-17690904 | None:intergenic | 25.0% |
| !! | TTAACCATGTTTTATACCTT+CGG | - | chr2_1:17691108-17691127 | Msa0198940:intron | 25.0% |
| !! | GCTTATTTATTCATTTGTTG+TGG | - | chr2_1:17691164-17691183 | Msa0198940:intron | 25.0% |
| ! | ATTAAAATTCCACTATGCTA+TGG | + | chr2_1:17691567-17691586 | None:intergenic | 25.0% |
| ! | TAGATTCTCTGATTGAAATA+CGG | - | chr2_1:17691646-17691665 | Msa0198940:intron | 25.0% |
| ! | AATCCTATTCAATTCTTGAT+GGG | - | chr2_1:17691672-17691691 | Msa0198940:intron | 25.0% |
| ! | CAAAACAAGATAATGAAATC+AGG | + | chr2_1:17692054-17692073 | None:intergenic | 25.0% |
| ! | TAGATATAGCTTCCATTATA+AGG | + | chr2_1:17692171-17692190 | None:intergenic | 25.0% |
| ! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2_1:17692396-17692415 | Msa0198940:intron | 25.0% |
| ! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2_1:17692396-17692415 | Msa0198940:intron | 25.0% |
| ! | TGAATTGTTATATGGTCATA+TGG | - | chr2_1:17692594-17692613 | Msa0198940:intron | 25.0% |
| ! | GATATTGTCTTGTAAATGAT+AGG | + | chr2_1:17692744-17692763 | None:intergenic | 25.0% |
| !! | TTCATCATTTTGTATTCTGT+AGG | - | chr2_1:17693286-17693305 | Msa0198940:intron | 25.0% |
| ! | TATTGTAAGTTTGCATTAGA+TGG | + | chr2_1:17693431-17693450 | None:intergenic | 25.0% |
| !!! | TAATACCATCTAGTGTTTTT+TGG | + | chr2_1:17693609-17693628 | None:intergenic | 25.0% |
| ! | AAAAAACTTAAGACTCACAT+TGG | - | chr2_1:17693712-17693731 | Msa0198940:intron | 25.0% |
| ! | TATACCAATTATATGACTGT+AGG | - | chr2_1:17693815-17693834 | Msa0198940:CDS | 25.0% |
| ! | TAGCTGAATAAAATAATCTC+AGG | - | chr2_1:17693879-17693898 | Msa0198940:CDS | 25.0% |
| ! | AATAAAATAATCTCAGGACA+AGG | - | chr2_1:17693885-17693904 | Msa0198940:CDS | 25.0% |
| ! | ATAAAATAATCTCAGGACAA+GGG | - | chr2_1:17693886-17693905 | Msa0198940:CDS | 25.0% |
| !! | CATACACATCTATTTGAAAT+AGG | - | chr2_1:17694026-17694045 | Msa0198940:intron | 25.0% |
| !! | TACACATCTATTTGAAATAG+GGG | - | chr2_1:17694028-17694047 | Msa0198940:intron | 25.0% |
| ! | CATTTATTGTGAGCTATATT+TGG | - | chr2_1:17694231-17694250 | Msa0198940:CDS | 25.0% |
| !!! | TGGGTTGAATTTTATATTTC+AGG | - | chr2_1:17694317-17694336 | Msa0198940:intron | 25.0% |
| ! | CTTCCAATAATAATGTTGAT+GGG | + | chr2_1:17694398-17694417 | None:intergenic | 25.0% |
| ! | CATCAACATTATTATTGGAA+GGG | - | chr2_1:17694397-17694416 | Msa0198940:intron | 25.0% |
| ! | TTCTAATTCTAAATCGATCT+CGG | + | chr2_1:17694478-17694497 | None:intergenic | 25.0% |
| ! | TATGGAAGAGCAAATAAAAT+TGG | + | chr2_1:17694793-17694812 | None:intergenic | 25.0% |
| TGAAATCGGAAAAAGGAAAT+CGG | + | chr2_1:17690489-17690508 | None:intergenic | 30.0% | |
| TGGGTAACCAAAAAATACAT+TGG | + | chr2_1:17690808-17690827 | None:intergenic | 30.0% | |
| ! | ATTTTCTGTATTGCTCGAAA+TGG | - | chr2_1:17690980-17690999 | Msa0198940:intron | 30.0% |
| ! | TTTTCTGTATTGCTCGAAAT+GGG | - | chr2_1:17690981-17691000 | Msa0198940:intron | 30.0% |
| ! | ACCTTTAGATCCAGATTTTA+CGG | + | chr2_1:17691213-17691232 | None:intergenic | 30.0% |
| ATCTAAAGGTTTCGTTATGT+GGG | - | chr2_1:17691223-17691242 | Msa0198940:intron | 30.0% | |
| TCATCATCACTTAGAGAAAA+AGG | + | chr2_1:17691383-17691402 | None:intergenic | 30.0% | |
| ATATCTCTTGAAACTTGAAG+AGG | + | chr2_1:17691422-17691441 | None:intergenic | 30.0% | |
| ! | ACCTTATACTAGAGCTTTTT+GGG | + | chr2_1:17691460-17691479 | None:intergenic | 30.0% |
| ! | AACCTTATACTAGAGCTTTT+TGG | + | chr2_1:17691461-17691480 | None:intergenic | 30.0% |
| ! | AAAAAGCTCTAGTATAAGGT+TGG | - | chr2_1:17691460-17691479 | Msa0198940:intron | 30.0% |
| ! | AAAAGCTCTAGTATAAGGTT+GGG | - | chr2_1:17691461-17691480 | Msa0198940:intron | 30.0% |
| AGATTCTCTGATTGAAATAC+GGG | - | chr2_1:17691647-17691666 | Msa0198940:intron | 30.0% | |
| GAATCCTATTCAATTCTTGA+TGG | - | chr2_1:17691671-17691690 | Msa0198940:intron | 30.0% | |
| ! | GTTTTGCGTGAATCATATAA+AGG | - | chr2_1:17692068-17692087 | Msa0198940:intron | 30.0% |
| TAACTGTGTTTACGTTATAC+AGG | - | chr2_1:17692137-17692156 | Msa0198940:intron | 30.0% | |
| ! | ATATCTAGCTTGAATGAACT+TGG | - | chr2_1:17692184-17692203 | Msa0198940:intron | 30.0% |
| AAGCAGAACAAATAAAAGTG+TGG | + | chr2_1:17692267-17692286 | None:intergenic | 30.0% | |
| ! | CATGTTGTTATTCTAACTTC+AGG | - | chr2_1:17692303-17692322 | Msa0198940:intron | 30.0% |
| CTACCTTGTGAATTGTTATA+TGG | - | chr2_1:17692586-17692605 | Msa0198940:intron | 30.0% | |
| TGACCATATAACAATTCACA+AGG | + | chr2_1:17692592-17692611 | None:intergenic | 30.0% | |
| ATTGTTATATGGTCATATGG+AGG | - | chr2_1:17692597-17692616 | Msa0198940:intron | 30.0% | |
| !! | CAATTCTAGGACTATAAACA+AGG | + | chr2_1:17692766-17692785 | None:intergenic | 30.0% |
| !! | TTTGATTTTGCTAGCTAAGT+TGG | - | chr2_1:17692896-17692915 | Msa0198940:intron | 30.0% |
| ! | TTGATTTTGCTAGCTAAGTT+GGG | - | chr2_1:17692897-17692916 | Msa0198940:intron | 30.0% |
| TGAAGCTAATTTGAGCTAAT+TGG | + | chr2_1:17692992-17693011 | None:intergenic | 30.0% | |
| TTGAAATAGCATCATAGATC+AGG | + | chr2_1:17693117-17693136 | None:intergenic | 30.0% | |
| AAGTGTTATAGCATTGCATT+TGG | - | chr2_1:17693201-17693220 | Msa0198940:intron | 30.0% | |
| !! | AAGATGCTTGGATTAGTATT+AGG | - | chr2_1:17693482-17693501 | Msa0198940:intron | 30.0% |
| TCTCACATTAGCTAGAAATA+AGG | - | chr2_1:17693516-17693535 | Msa0198940:intron | 30.0% | |
| AACTTGGTTCATGGAATATA+TGG | + | chr2_1:17693658-17693677 | None:intergenic | 30.0% | |
| !! | CGACATTAGAAGTTTTATGT+AGG | + | chr2_1:17693750-17693769 | None:intergenic | 30.0% |
| ACATAAAACTTCTAATGTCG+CGG | - | chr2_1:17693750-17693769 | Msa0198940:intron | 30.0% | |
| TAAAATAATCTCAGGACAAG+GGG | - | chr2_1:17693887-17693906 | Msa0198940:CDS | 30.0% | |
| AACAAAATTACAACTCGACA+AGG | + | chr2_1:17693997-17694016 | None:intergenic | 30.0% | |
| ! | TTGGATGCTATTCTCATTTT+TGG | - | chr2_1:17694250-17694269 | Msa0198940:CDS | 30.0% |
| ACACCCATCAACATTATTAT+TGG | - | chr2_1:17694392-17694411 | Msa0198940:intron | 30.0% | |
| CCTTCCAATAATAATGTTGA+TGG | + | chr2_1:17694399-17694418 | None:intergenic | 30.0% | |
| CCATCAACATTATTATTGGA+AGG | - | chr2_1:17694396-17694415 | Msa0198940:intron | 30.0% | |
| ! | AAGGCTCTATGAAATTTTAC+AGG | - | chr2_1:17694427-17694446 | Msa0198940:intron | 30.0% |
| ! | AGGCTCTATGAAATTTTACA+GGG | - | chr2_1:17694428-17694447 | Msa0198940:intron | 30.0% |
| !!! | TTTTTTTTGGGGGAGTTACT+AGG | - | chr2_1:17690647-17690666 | Msa0198940:CDS | 35.0% |
| !!! | TTTAGTTTTAGGCTCAGTCA+AGG | - | chr2_1:17690839-17690858 | Msa0198940:CDS | 35.0% |
| TTATGACTATGTAGAGCTCA+TGG | - | chr2_1:17690901-17690920 | Msa0198940:CDS | 35.0% | |
| !! | TCTTCTGACCATTTTTGCTT+AGG | + | chr2_1:17691011-17691030 | None:intergenic | 35.0% |
| ! | TTGACCGAAGGTATAAAACA+TGG | + | chr2_1:17691115-17691134 | None:intergenic | 35.0% |
| TTAGATCAACATTTGACCGA+AGG | + | chr2_1:17691127-17691146 | None:intergenic | 35.0% | |
| TCGGTCAAATGTTGATCTAA+AGG | - | chr2_1:17691127-17691146 | Msa0198940:intron | 35.0% | |
| TAATGTTGGACCGTAAAATC+TGG | - | chr2_1:17691200-17691219 | Msa0198940:intron | 35.0% | |
| ACCGTAAAATCTGGATCTAA+AGG | - | chr2_1:17691209-17691228 | Msa0198940:intron | 35.0% | |
| GATCTAAAGGTTTCGTTATG+TGG | - | chr2_1:17691222-17691241 | Msa0198940:intron | 35.0% | |
| ! | AATGAAAAGGGTGCATTATC+AGG | - | chr2_1:17691322-17691341 | Msa0198940:intron | 35.0% |
| TCAATCAGAGAATCTAACTG+AGG | + | chr2_1:17691642-17691661 | None:intergenic | 35.0% | |
| GATCCCATCAAGAATTGAAT+AGG | + | chr2_1:17691678-17691697 | None:intergenic | 35.0% | |
| GAAATTATCTTCCACTTGAG+GGG | + | chr2_1:17691729-17691748 | None:intergenic | 35.0% | |
| CGAAATTATCTTCCACTTGA+GGG | + | chr2_1:17691730-17691749 | None:intergenic | 35.0% | |
| TCGAAATTATCTTCCACTTG+AGG | + | chr2_1:17691731-17691750 | None:intergenic | 35.0% | |
| AGATGTTCGAACGTAATCAA+GGG | - | chr2_1:17691750-17691769 | Msa0198940:intron | 35.0% | |
| !! | GTTGATCGGCTTTTTGAAAA+AGG | - | chr2_1:17691826-17691845 | Msa0198940:intron | 35.0% |
| TCGGCAATTGTCTTTCAATT+AGG | - | chr2_1:17691966-17691985 | Msa0198940:intron | 35.0% | |
| CGGCAATTGTCTTTCAATTA+GGG | - | chr2_1:17691967-17691986 | Msa0198940:intron | 35.0% | |
| ATGAATGATCTTAACACGCT+TGG | + | chr2_1:17692007-17692026 | None:intergenic | 35.0% | |
| CAAGAATACAAGGAAAGCAA+TGG | + | chr2_1:17692031-17692050 | None:intergenic | 35.0% | |
| TGAAATCAGGCAAGAATACA+AGG | + | chr2_1:17692041-17692060 | None:intergenic | 35.0% | |
| ! | GTTTTGCTTGCATCCTATAA+AGG | - | chr2_1:17692103-17692122 | Msa0198940:intron | 35.0% |
| TGTGTTTACGTTATACAGGT+TGG | - | chr2_1:17692141-17692160 | Msa0198940:intron | 35.0% | |
| ! | CAGGTTGGATAACCTTATAA+TGG | - | chr2_1:17692156-17692175 | Msa0198940:intron | 35.0% |
| AACCATTGCTTCTTTCATTG+AGG | - | chr2_1:17692222-17692241 | Msa0198940:intron | 35.0% | |
| TACCTCAATGAAAGAAGCAA+TGG | + | chr2_1:17692227-17692246 | None:intergenic | 35.0% | |
| ATAGGTGAGATCATCTTAGT+GGG | + | chr2_1:17692675-17692694 | None:intergenic | 35.0% | |
| AATAGGTGAGATCATCTTAG+TGG | + | chr2_1:17692676-17692695 | None:intergenic | 35.0% | |
| ACTAAGATGATCTCACCTAT+TGG | - | chr2_1:17692675-17692694 | Msa0198940:intron | 35.0% | |
| CTAAGATGATCTCACCTATT+GGG | - | chr2_1:17692676-17692695 | Msa0198940:intron | 35.0% | |
| ! | TGATTTTGCTAGCTAAGTTG+GGG | - | chr2_1:17692898-17692917 | Msa0198940:intron | 35.0% |
| ! | CAGAGCTAGTTTGAAAAAGA+AGG | - | chr2_1:17692932-17692951 | Msa0198940:intron | 35.0% |
| CTCACTTGTCTTCAACATAA+TGG | + | chr2_1:17692969-17692988 | None:intergenic | 35.0% | |
| ! | TTAGCTCAAATTAGCTTCAG+TGG | - | chr2_1:17692993-17693012 | Msa0198940:intron | 35.0% |
| GTTATAGCATTGCATTTGGT+TGG | - | chr2_1:17693205-17693224 | Msa0198940:intron | 35.0% | |
| TATTCTGTAGGACCATTACT+GGG | - | chr2_1:17693298-17693317 | Msa0198940:intron | 35.0% | |
| !! | TTGCTTAACTCTAAGATGCT+TGG | - | chr2_1:17693470-17693489 | Msa0198940:intron | 35.0% |
| AGTGTCTATCCAGACATTAT+TGG | - | chr2_1:17693628-17693647 | Msa0198940:intron | 35.0% | |
| TTGGTTCATGGAATATATGG+TGG | + | chr2_1:17693655-17693674 | None:intergenic | 35.0% | |
| ACACTAACAAACTTGGTTCA+TGG | + | chr2_1:17693667-17693686 | None:intergenic | 35.0% | |
| !! | TGAACCAAGTTTGTTAGTGT+TGG | - | chr2_1:17693667-17693686 | Msa0198940:intron | 35.0% |
| !! | GAACCAAGTTTGTTAGTGTT+GGG | - | chr2_1:17693668-17693687 | Msa0198940:intron | 35.0% |
| !! | AACCAAGTTTGTTAGTGTTG+GGG | - | chr2_1:17693669-17693688 | Msa0198940:intron | 35.0% |
| TTGTGTAATGTGTAGGGTTT+GGG | + | chr2_1:17693788-17693807 | None:intergenic | 35.0% | |
| TTTGTGTAATGTGTAGGGTT+TGG | + | chr2_1:17693789-17693808 | None:intergenic | 35.0% | |
| CAGAGTTTGTGTAATGTGTA+GGG | + | chr2_1:17693794-17693813 | None:intergenic | 35.0% | |
| CAGACCTACAGTCATATAAT+TGG | + | chr2_1:17693822-17693841 | None:intergenic | 35.0% | |
| ! | AGTAGTGACTTTTTGCTTGA+AGG | - | chr2_1:17693958-17693977 | Msa0198940:CDS | 35.0% |
| TGTTTCTTATATACAGCCGT+TGG | - | chr2_1:17694094-17694113 | Msa0198940:intron | 35.0% | |
| CAACATTATTATTGGAAGGG+AGG | - | chr2_1:17694400-17694419 | Msa0198940:intron | 35.0% | |
| ! | AAGCTTTTGTAGAAGCTGAA+AGG | - | chr2_1:17694634-17694653 | Msa0198940:intron | 35.0% |
| TTGTAGAAGCTGAAAGGAAA+AGG | - | chr2_1:17694640-17694659 | Msa0198940:intron | 35.0% | |
| ! | GGACATGTAGAAGATTCTTT+TGG | - | chr2_1:17694741-17694760 | Msa0198940:intron | 35.0% |
| ACTAGGAATTGTGACGACAA+AGG | - | chr2_1:17690664-17690683 | Msa0198940:CDS | 40.0% | |
| CTAGGAATTGTGACGACAAA+GGG | - | chr2_1:17690665-17690684 | Msa0198940:CDS | 40.0% | |
| AATTGTGACGACAAAGGGAA+TGG | - | chr2_1:17690670-17690689 | Msa0198940:CDS | 40.0% | |
| ATTGTGACGACAAAGGGAAT+GGG | - | chr2_1:17690671-17690690 | Msa0198940:CDS | 40.0% | |
| TGGGTGTTCCTAAGCAAAAA+TGG | - | chr2_1:17691000-17691019 | Msa0198940:intron | 40.0% | |
| GCAAAAATGGTCAGAAGAAG+AGG | - | chr2_1:17691013-17691032 | Msa0198940:intron | 40.0% | |
| !! | GATAACTCCAGCTTTAAGTG+CGG | + | chr2_1:17691042-17691061 | None:intergenic | 40.0% |
| AAAGCTGGAGTTATCAAGCA+TGG | - | chr2_1:17691047-17691066 | Msa0198940:intron | 40.0% | |
| AAGCTGGAGTTATCAAGCAT+GGG | - | chr2_1:17691048-17691067 | Msa0198940:intron | 40.0% | |
| GGTTAAATTCAGGATCCTTG+AGG | + | chr2_1:17691094-17691113 | None:intergenic | 40.0% | |
| GGGTTGTTGGATAGGATAAA+TGG | - | chr2_1:17691243-17691262 | Msa0198940:intron | 40.0% | |
| ATAGAGTTGTCCTCGTGTAT+TGG | + | chr2_1:17691350-17691369 | None:intergenic | 40.0% | |
| AATACACGAGGACAACTCTA+TGG | - | chr2_1:17691349-17691368 | Msa0198940:intron | 40.0% | |
| AGAGATATGCCGCAAATTTC+TGG | - | chr2_1:17691434-17691453 | Msa0198940:intron | 40.0% | |
| !! | CTTTTTGGGCCAGAAATTTG+CGG | + | chr2_1:17691446-17691465 | None:intergenic | 40.0% |
| ! | GCCCAAAAAGCTCTAGTATA+AGG | - | chr2_1:17691456-17691475 | Msa0198940:intron | 40.0% |
| AAATAGCAGCCATAGCATAG+TGG | - | chr2_1:17691555-17691574 | Msa0198940:intron | 40.0% | |
| TGATGGGATCAGATCAGAAA+CGG | - | chr2_1:17691688-17691707 | Msa0198940:intron | 40.0% | |
| TTGCAAATTATCCCCTCAAG+TGG | - | chr2_1:17691715-17691734 | Msa0198940:intron | 40.0% | |
| GAGATGTTCGAACGTAATCA+AGG | - | chr2_1:17691749-17691768 | Msa0198940:intron | 40.0% | |
| GACACTTTACCACTGTTGAT+CGG | - | chr2_1:17691812-17691831 | Msa0198940:intron | 40.0% | |
| TTCAAAAAGCCGATCAACAG+TGG | + | chr2_1:17691824-17691843 | None:intergenic | 40.0% | |
| !! | CGGCTTTTTGAAAAAGGATG+AGG | - | chr2_1:17691832-17691851 | Msa0198940:intron | 40.0% |
| AATACTCGCATCTATCACCT+AGG | - | chr2_1:17691910-17691929 | Msa0198940:CDS | 40.0% | |
| ATACTCGCATCTATCACCTA+GGG | - | chr2_1:17691911-17691930 | Msa0198940:CDS | 40.0% | |
| TTTGTTCTATTCTGCACCCT+AGG | + | chr2_1:17691930-17691949 | None:intergenic | 40.0% | |
| ! | TCTAGCTTGAATGAACTTGG+TGG | - | chr2_1:17692187-17692206 | Msa0198940:intron | 40.0% |
| ATATGGTCATATGGAGGTCA+TGG | - | chr2_1:17692603-17692622 | Msa0198940:intron | 40.0% | |
| TATGGTCATATGGAGGTCAT+GGG | - | chr2_1:17692604-17692623 | Msa0198940:intron | 40.0% | |
| TAGGTGAGATCATCTTAGTG+GGG | + | chr2_1:17692674-17692693 | None:intergenic | 40.0% | |
| !! | AAACTAGCTCTGCTTCATGA+TGG | + | chr2_1:17692924-17692943 | None:intergenic | 40.0% |
| GTATTCTGTAGGACCATTAC+TGG | - | chr2_1:17693297-17693316 | Msa0198940:intron | 40.0% | |
| ! | CTGAAGTATCTTACATCTCG+TGG | - | chr2_1:17693356-17693375 | Msa0198940:intron | 40.0% |
| ATCTCGTGGAAAACTGATCA+AGG | - | chr2_1:17693370-17693389 | Msa0198940:intron | 40.0% | |
| ! | TAGGCTTTATAAGCTCTGCT+TGG | + | chr2_1:17693542-17693561 | None:intergenic | 40.0% |
| AAGCAGAGCTTATAAAGCCT+AGG | - | chr2_1:17693541-17693560 | Msa0198940:intron | 40.0% | |
| CTCCAGCAAACCAATTTCTA+CGG | + | chr2_1:17693576-17693595 | None:intergenic | 40.0% | |
| TCAGGCCAAAAAACACTAGA+TGG | - | chr2_1:17693601-17693620 | Msa0198940:intron | 40.0% | |
| TATGGTGGTCCAATAATGTC+TGG | + | chr2_1:17693640-17693659 | None:intergenic | 40.0% | |
| !! | ACCAAGTTTGTTAGTGTTGG+GGG | - | chr2_1:17693670-17693689 | Msa0198940:intron | 40.0% |
| TGTGTAATGTGTAGGGTTTG+GGG | + | chr2_1:17693787-17693806 | None:intergenic | 40.0% | |
| CCAGAGTTTGTGTAATGTGT+AGG | + | chr2_1:17693795-17693814 | None:intergenic | 40.0% | |
| CCTACACATTACACAAACTC+TGG | - | chr2_1:17693792-17693811 | Msa0198940:intron | 40.0% | |
| !! | AGTGGAAAATGGGCTAGATA+TGG | - | chr2_1:17693851-17693870 | Msa0198940:CDS | 40.0% |
| GAGAGATGGTGAAACGAATA+AGG | - | chr2_1:17693915-17693934 | Msa0198940:CDS | 40.0% | |
| !! | TATTTGAAATAGGGGTGCTG+TGG | - | chr2_1:17694036-17694055 | Msa0198940:intron | 40.0% |
| ! | TTATATACAGCCGTTGGTTG+TGG | - | chr2_1:17694100-17694119 | Msa0198940:intron | 40.0% |
| ! | TATATACAGCCGTTGGTTGT+GGG | - | chr2_1:17694101-17694120 | Msa0198940:intron | 40.0% |
| ! | TTATATTTCAGGTGAAGCGC+AGG | - | chr2_1:17694328-17694347 | Msa0198940:intron | 40.0% |
| TTATTGGAAGGGAGGCAAAA+AGG | - | chr2_1:17694408-17694427 | Msa0198940:intron | 40.0% | |
| TTCTAAATCGATCTCGGACT+TGG | + | chr2_1:17694472-17694491 | None:intergenic | 40.0% | |
| AGGAGAAAAACACCCAAAGA+CGG | - | chr2_1:17694667-17694686 | Msa0198940:intron | 40.0% | |
| AGCCAAGATTTACCGTCTTT+GGG | + | chr2_1:17694682-17694701 | None:intergenic | 40.0% | |
| AAGCCAAGATTTACCGTCTT+TGG | + | chr2_1:17694683-17694702 | None:intergenic | 40.0% | |
| !!! | AGTTTTAGGCTCAGTCAAGG+TGG | - | chr2_1:17690842-17690861 | Msa0198940:CDS | 45.0% |
| !! | GTTTTAGGCTCAGTCAAGGT+GGG | - | chr2_1:17690843-17690862 | Msa0198940:CDS | 45.0% |
| AGCTGGAGTTATCAAGCATG+GGG | - | chr2_1:17691049-17691068 | Msa0198940:intron | 45.0% | |
| ! | GGTTTCGTTATGTGGGTTGT+TGG | - | chr2_1:17691230-17691249 | Msa0198940:intron | 45.0% |
| ! | CGTTATGTGGGTTGTTGGAT+AGG | - | chr2_1:17691235-17691254 | Msa0198940:intron | 45.0% |
| ATGGCGAAATTTGAGCGTGA+TGG | - | chr2_1:17691262-17691281 | Msa0198940:intron | 45.0% | |
| AATTTGAGCGTGATGGCAAG+TGG | - | chr2_1:17691269-17691288 | Msa0198940:intron | 45.0% | |
| AGCCAAAGGGAGCAATGAAA+AGG | - | chr2_1:17691309-17691328 | Msa0198940:intron | 45.0% | |
| GCCAAAGGGAGCAATGAAAA+GGG | - | chr2_1:17691310-17691329 | Msa0198940:intron | 45.0% | |
| ! | ACCCTTTTCATTGCTCCCTT+TGG | + | chr2_1:17691314-17691333 | None:intergenic | 45.0% |
| TTATCAGGCACCAATACACG+AGG | - | chr2_1:17691337-17691356 | Msa0198940:intron | 45.0% | |
| ! | GTCACTTTAGCAACCACACA+AGG | - | chr2_1:17691788-17691807 | Msa0198940:intron | 45.0% |
| ! | TGGTAAAGTGTCACCTTGTG+TGG | + | chr2_1:17691804-17691823 | None:intergenic | 45.0% |
| TACACCAGCAAGCATATCAG+AGG | + | chr2_1:17692634-17692653 | None:intergenic | 45.0% | |
| ! | CTGATATGCTTGCTGGTGTA+AGG | - | chr2_1:17692634-17692653 | Msa0198940:intron | 45.0% |
| AGATGATCTCACCTATTGGG+AGG | - | chr2_1:17692679-17692698 | Msa0198940:intron | 45.0% | |
| TAACCAGGTTTCAGAAGGCA+TGG | + | chr2_1:17693055-17693074 | None:intergenic | 45.0% | |
| CACAGTAACCAGGTTTCAGA+AGG | + | chr2_1:17693060-17693079 | None:intergenic | 45.0% | |
| AACCTGGTTACTGTGTCTTG+TGG | - | chr2_1:17693065-17693084 | Msa0198940:CDS | 45.0% | |
| AACCACAAGACACAGTAACC+AGG | + | chr2_1:17693070-17693089 | None:intergenic | 45.0% | |
| !!! | AGCAGCTTTTTGAAGTCAGC+AGG | + | chr2_1:17693326-17693345 | None:intergenic | 45.0% |
| GCAATCCTCACCGTAGAAAT+TGG | - | chr2_1:17693563-17693582 | Msa0198940:intron | 45.0% | |
| GCAAACCAATTTCTACGGTG+AGG | + | chr2_1:17693571-17693590 | None:intergenic | 45.0% | |
| !! | CACCGTAGAAATTGGTTTGC+TGG | - | chr2_1:17693571-17693590 | Msa0198940:intron | 45.0% |
| !! | TGGTTTGCTGGAGTTGAATC+AGG | - | chr2_1:17693583-17693602 | Msa0198940:intron | 45.0% |
| ACCCCCAACACTAACAAACT+TGG | + | chr2_1:17693674-17693693 | None:intergenic | 45.0% | |
| ACTCACATTGGCGTGAGATA+AGG | - | chr2_1:17693724-17693743 | Msa0198940:intron | 45.0% | |
| CTAATGTCGCGGCAAATCTT+AGG | - | chr2_1:17693761-17693780 | Msa0198940:intron | 45.0% | |
| TGAGTTCGTGGAGTGGAAAA+TGG | - | chr2_1:17693840-17693859 | Msa0198940:CDS | 45.0% | |
| GAGTTCGTGGAGTGGAAAAT+GGG | - | chr2_1:17693841-17693860 | Msa0198940:CDS | 45.0% | |
| AATCTCAGGACAAGGGGATT+TGG | - | chr2_1:17693893-17693912 | Msa0198940:CDS | 45.0% | |
| CTGTCTGAATATGCTGGAGT+AGG | + | chr2_1:17694366-17694385 | None:intergenic | 45.0% | |
| ACTCCAGCATATTCAGACAG+AGG | - | chr2_1:17694366-17694385 | Msa0198940:intron | 45.0% | |
| CTTCCTCTGTCTGAATATGC+TGG | + | chr2_1:17694372-17694391 | None:intergenic | 45.0% | |
| ! | AATCGATCTCGGACTTGGTA+TGG | + | chr2_1:17694467-17694486 | None:intergenic | 45.0% |
| AGCTGAAAGGAAAAGGCTGA+AGG | - | chr2_1:17694647-17694666 | Msa0198940:intron | 45.0% | |
| CACCCAAAGACGGTAAATCT+TGG | - | chr2_1:17694677-17694696 | Msa0198940:intron | 45.0% | |
| TTCCATAAAACCTGCTTGCG+AGG | - | chr2_1:17694806-17694825 | Msa0198940:five_prime_UTR | 45.0% | |
| TCCATAAAACCTGCTTGCGA+GGG | - | chr2_1:17694807-17694826 | Msa0198940:five_prime_UTR | 45.0% | |
| !! | CAAAAATAAAATAAAATAAT+TGG | + | chr2_1:17691488-17691507 | None:intergenic | 5.0% |
| !!! | TTATTTTTGTTTTTTTAATA+CGG | - | chr2_1:17691499-17691518 | Msa0198940:intron | 5.0% |
| ACCGCATCACAGAATTGCGT+CGG | - | chr2_1:17690578-17690597 | Msa0198940:exon | 50.0% | |
| TCCGACGCAATTCTGTGATG+CGG | + | chr2_1:17690582-17690601 | None:intergenic | 50.0% | |
| GAGGAATCCGCACTTAAAGC+TGG | - | chr2_1:17691032-17691051 | Msa0198940:intron | 50.0% | |
| TGGAGTTATCAAGCATGGGG+TGG | - | chr2_1:17691052-17691071 | Msa0198940:intron | 50.0% | |
| GGAGTTATCAAGCATGGGGT+GGG | - | chr2_1:17691053-17691072 | Msa0198940:intron | 50.0% | |
| TCAAGCATGGGGTGGGTAAA+TGG | - | chr2_1:17691060-17691079 | Msa0198940:intron | 50.0% | |
| TAAATGGCGCACGATCCTCA+AGG | - | chr2_1:17691076-17691095 | Msa0198940:intron | 50.0% | |
| TGAATCCTGACGCAAGAGTG+AGG | - | chr2_1:17692560-17692579 | Msa0198940:intron | 50.0% | |
| ACAGCCTCTGATATGCTTGC+TGG | - | chr2_1:17692627-17692646 | Msa0198940:intron | 50.0% | |
| !! | ACTCCATGCCTTCTGAAACC+TGG | - | chr2_1:17693049-17693068 | Msa0198940:CDS | 50.0% |
| TTCTACGGTGAGGATTGCCT+AGG | + | chr2_1:17693561-17693580 | None:intergenic | 50.0% | |
| TGACTGTAGGTCTGAGTTCG+TGG | - | chr2_1:17693828-17693847 | Msa0198940:CDS | 50.0% | |
| GACAAGGGGATTTGGAGAGA+TGG | - | chr2_1:17693901-17693920 | Msa0198940:CDS | 50.0% | |
| TTCAGGTGAAGCGCAGGTAT+AGG | - | chr2_1:17694334-17694353 | Msa0198940:intron | 50.0% | |
| AAGGTCCATGTCTGCACAAG+AGG | - | chr2_1:17694503-17694522 | Msa0198940:intron | 50.0% | |
| TGTATTATGCCCTCGCAAGC+AGG | + | chr2_1:17694819-17694838 | None:intergenic | 50.0% | |
| ATATTCCGATCTCCCTCGCG+TGG | - | chr2_1:17690513-17690532 | Msa0198940:three_prime_UTR | 55.0% | |
| GTGATGCGGTGCCCTTTGAA+GGG | + | chr2_1:17690568-17690587 | None:intergenic | 55.0% | |
| TGTGATGCGGTGCCCTTTGA+AGG | + | chr2_1:17690569-17690588 | None:intergenic | 55.0% | |
| AGAATTGCGTCGGAGCTGAG+CGG | - | chr2_1:17690588-17690607 | Msa0198940:CDS | 55.0% | |
| TGAGCGTGATGGCAAGTGGA+TGG | - | chr2_1:17691273-17691292 | Msa0198940:intron | 55.0% | |
| GAGCGTGATGGCAAGTGGAT+GGG | - | chr2_1:17691274-17691293 | Msa0198940:intron | 55.0% | |
| GCTTCGAGGGAGAAGCCAAA+GGG | - | chr2_1:17691296-17691315 | Msa0198940:intron | 55.0% | |
| ATCCTGACGCAAGAGTGAGG+TGG | - | chr2_1:17692563-17692582 | Msa0198940:intron | 55.0% | |
| TAGGGCACAAGCCTCCCAAT+AGG | + | chr2_1:17692693-17692712 | None:intergenic | 55.0% | |
| TGCAAGACACTCACACGCAC+AGG | + | chr2_1:17693026-17693045 | None:intergenic | 55.0% | |
| AGTCAGCAGGTGCCCAGTAA+TGG | + | chr2_1:17693313-17693332 | None:intergenic | 55.0% | |
| ! | TAGTGTTGGGGGTGATGAGC+AGG | - | chr2_1:17693681-17693700 | Msa0198940:intron | 55.0% |
| GTAGGTCTGAGTTCGTGGAG+TGG | - | chr2_1:17693833-17693852 | Msa0198940:CDS | 55.0% | |
| ! | ACAGCCGTTGGTTGTGGGTT+TGG | - | chr2_1:17694106-17694125 | Msa0198940:intron | 55.0% |
| ! | CAGCCGTTGGTTGTGGGTTT+GGG | - | chr2_1:17694107-17694126 | Msa0198940:intron | 55.0% |
| CAGCCCAAACCCACAACCAA+CGG | + | chr2_1:17694113-17694132 | None:intergenic | 55.0% | |
| AACTGCTCGAGCAGCACATG+CGG | + | chr2_1:17694532-17694551 | None:intergenic | 55.0% | |
| TGCTCGAGCAGTTGCTGAAG+CGG | - | chr2_1:17694539-17694558 | Msa0198940:intron | 55.0% | |
| GGAGGCTGAAGAGGCAACAA+AGG | - | chr2_1:17694575-17694594 | Msa0198940:intron | 55.0% | |
| GGCTGAAGAGGCAACAAAGG+AGG | - | chr2_1:17694578-17694597 | Msa0198940:intron | 55.0% | |
| AGAGGCAACAAAGGAGGCAG+AGG | - | chr2_1:17694584-17694603 | Msa0198940:intron | 55.0% | |
| AGAAGCGGAGGCAGATGCAA+TGG | - | chr2_1:17694611-17694630 | Msa0198940:intron | 55.0% | |
| ! | GCCCTCGCAAGCAGGTTTTA+TGG | + | chr2_1:17694811-17694830 | None:intergenic | 55.0% |
| CCTCACCGCTGCGTTGTGAT+CGG | + | chr2_1:17690457-17690476 | None:intergenic | 60.0% | |
| GATTCCGGCCGCCCTTCAAA+GGG | - | chr2_1:17690554-17690573 | Msa0198940:three_prime_UTR | 60.0% | |
| ! | ATGCGGTGCCCTTTGAAGGG+CGG | + | chr2_1:17690565-17690584 | None:intergenic | 60.0% |
| ! | TGGCAAGTGGATGGGCTTCG+AGG | - | chr2_1:17691282-17691301 | Msa0198940:intron | 60.0% |
| ! | GGCAAGTGGATGGGCTTCGA+GGG | - | chr2_1:17691283-17691302 | Msa0198940:intron | 60.0% |
| GGCTTCGAGGGAGAAGCCAA+AGG | - | chr2_1:17691295-17691314 | Msa0198940:intron | 60.0% | |
| AGCCACCTCACTCTTGCGTC+AGG | + | chr2_1:17692568-17692587 | None:intergenic | 60.0% | |
| GGCTGCCTCTTGTGCAGACA+TGG | + | chr2_1:17694511-17694530 | None:intergenic | 60.0% | |
| TGCTGAAGCGGAAGCCCTCA+TGG | - | chr2_1:17694551-17694570 | Msa0198940:intron | 60.0% | |
| TGAAGCGGAAGCCCTCATGG+CGG | - | chr2_1:17694554-17694573 | Msa0198940:intron | 60.0% | |
| CTCTTCAGCCTCCGCCATGA+GGG | + | chr2_1:17694568-17694587 | None:intergenic | 60.0% | |
| !! | CAGCGCCGATCACAACGCAG+CGG | - | chr2_1:17690449-17690468 | Msa0198940:three_prime_UTR | 65.0% |
| CCGATCACAACGCAGCGGTG+AGG | - | chr2_1:17690454-17690473 | Msa0198940:three_prime_UTR | 65.0% | |
| TTCCGATCTCCCTCGCGTGG+TGG | - | chr2_1:17690516-17690535 | Msa0198940:three_prime_UTR | 65.0% | |
| CGCCGACGAGGAAGCGATTC+CGG | - | chr2_1:17690539-17690558 | Msa0198940:three_prime_UTR | 65.0% | |
| GGCCGGAATCGCTTCCTCGT+CGG | + | chr2_1:17690544-17690563 | None:intergenic | 65.0% | |
| CGATTCCGGCCGCCCTTCAA+AGG | - | chr2_1:17690553-17690572 | Msa0198940:three_prime_UTR | 65.0% | |
| CCTCTTCAGCCTCCGCCATG+AGG | + | chr2_1:17694569-17694588 | None:intergenic | 65.0% | |
| ! | CCTCATGGCGGAGGCTGAAG+AGG | - | chr2_1:17694566-17694585 | Msa0198940:intron | 65.0% |
| GGAGGCAGAGGCTGCAGAAG+CGG | - | chr2_1:17694596-17694615 | Msa0198940:intron | 65.0% | |
| CGCCACCACGCGAGGGAGAT+CGG | + | chr2_1:17690521-17690540 | None:intergenic | 70.0% | |
| ! | GGTGCCCTTTGAAGGGCGGC+CGG | + | chr2_1:17690561-17690580 | None:intergenic | 70.0% |
| AGCGGAAGCCCTCATGGCGG+AGG | - | chr2_1:17694557-17694576 | Msa0198940:intron | 70.0% | |
| GGCAGAGGCTGCAGAAGCGG+AGG | - | chr2_1:17694599-17694618 | Msa0198940:intron | 70.0% | |
| TCGTCGGCGCCACCACGCGA+GGG | + | chr2_1:17690528-17690547 | None:intergenic | 75.0% | |
| ! | CTCGTCGGCGCCACCACGCG+AGG | + | chr2_1:17690529-17690548 | None:intergenic | 80.0% |
| !!! | CTCGCGTGGTGGCGCCGACG+AGG | - | chr2_1:17690527-17690546 | Msa0198940:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 17690337 | 17694941 | 17690337 | ID=Msa0198940;Name=Msa0198940 |
| chr2_1 | mRNA | 17690337 | 17694941 | 17690337 | ID=Msa0198940-mRNA-1;Parent=Msa0198940;Name=Msa0198940-mRNA-1;_AED=0.35;_eAED=0.35;_QI=167|1|1|1|0.6|0.66|6|249|297 |
| chr2_1 | exon | 17690337 | 17690939 | 17690337 | ID=Msa0198940-mRNA-1:exon:7526;Parent=Msa0198940-mRNA-1 |
| chr2_1 | exon | 17691887 | 17691970 | 17691887 | ID=Msa0198940-mRNA-1:exon:7525;Parent=Msa0198940-mRNA-1 |
| chr2_1 | exon | 17693035 | 17693119 | 17693035 | ID=Msa0198940-mRNA-1:exon:7524;Parent=Msa0198940-mRNA-1 |
| chr2_1 | exon | 17693801 | 17694021 | 17693801 | ID=Msa0198940-mRNA-1:exon:7523;Parent=Msa0198940-mRNA-1 |
| chr2_1 | exon | 17694130 | 17694307 | 17694130 | ID=Msa0198940-mRNA-1:exon:7522;Parent=Msa0198940-mRNA-1 |
| chr2_1 | exon | 17694803 | 17694941 | 17694803 | ID=Msa0198940-mRNA-1:exon:7521;Parent=Msa0198940-mRNA-1 |
| chr2_1 | five_prime_UTR | 17694803 | 17694941 | 17694803 | ID=Msa0198940-mRNA-1:five_prime_utr;Parent=Msa0198940-mRNA-1 |
| chr2_1 | five_prime_UTR | 17694280 | 17694307 | 17694280 | ID=Msa0198940-mRNA-1:five_prime_utr;Parent=Msa0198940-mRNA-1 |
| chr2_1 | CDS | 17694130 | 17694279 | 17694130 | ID=Msa0198940-mRNA-1:cds;Parent=Msa0198940-mRNA-1 |
| chr2_1 | CDS | 17693801 | 17694021 | 17693801 | ID=Msa0198940-mRNA-1:cds;Parent=Msa0198940-mRNA-1 |
| chr2_1 | CDS | 17693035 | 17693119 | 17693035 | ID=Msa0198940-mRNA-1:cds;Parent=Msa0198940-mRNA-1 |
| chr2_1 | CDS | 17691887 | 17691970 | 17691887 | ID=Msa0198940-mRNA-1:cds;Parent=Msa0198940-mRNA-1 |
| chr2_1 | CDS | 17690586 | 17690939 | 17690586 | ID=Msa0198940-mRNA-1:cds;Parent=Msa0198940-mRNA-1 |
| chr2_1 | three_prime_UTR | 17690337 | 17690585 | 17690337 | ID=Msa0198940-mRNA-1:three_prime_utr;Parent=Msa0198940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
