Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791820 | XP_039688270.1 | 93.421 | 152 | 7 | 1 | 77 | 225 | 1 | 152 | 2.38e-90 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0791820 | -0.840461 | 8.575918e-58 | -8.615850e-47 |
| Msa0006040 | Msa0791820 | 0.807296 | 5.418625e-50 | -8.615850e-47 |
| Msa0006880 | Msa0791820 | 0.803445 | 3.474348e-49 | -8.615850e-47 |
| Msa0013050 | Msa0791820 | -0.829448 | 5.118253e-55 | -8.615850e-47 |
| Msa0023830 | Msa0791820 | -0.818244 | 2.168758e-52 | -8.615850e-47 |
| Msa0030380 | Msa0791820 | 0.802202 | 6.272890e-49 | -8.615850e-47 |
| Msa0032610 | Msa0791820 | 0.816004 | 6.912966e-52 | -8.615850e-47 |
| Msa0048000 | Msa0791820 | 0.803417 | 3.521014e-49 | -8.615850e-47 |
| Msa0054750 | Msa0791820 | 0.812461 | 4.190245e-51 | -8.615850e-47 |
| Msa0055150 | Msa0791820 | 0.817782 | 2.757638e-52 | -8.615850e-47 |
| Msa0056030 | Msa0791820 | 0.820224 | 7.679735e-53 | -8.615850e-47 |
| Msa0057140 | Msa0791820 | 0.822865 | 1.884492e-53 | -8.615850e-47 |
| Msa0068760 | Msa0791820 | 0.801401 | 9.162297e-49 | -8.615850e-47 |
| Msa0069260 | Msa0791820 | 0.833185 | 6.166130e-56 | -8.615850e-47 |
| Msa0069280 | Msa0791820 | 0.826227 | 3.045261e-54 | -8.615850e-47 |
| Msa0069310 | Msa0791820 | 0.848913 | 4.526243e-60 | -8.615850e-47 |
| Msa0071240 | Msa0791820 | 0.804977 | 1.666784e-49 | -8.615850e-47 |
| Msa0085360 | Msa0791820 | -0.811045 | 8.519559e-51 | -8.615850e-47 |
| Msa0090030 | Msa0791820 | 0.845793 | 3.252724e-59 | -8.615850e-47 |
| Msa0091570 | Msa0791820 | 0.804158 | 2.471065e-49 | -8.615850e-47 |
| Msa0092990 | Msa0791820 | 0.817839 | 2.677587e-52 | -8.615850e-47 |
| Msa0094920 | Msa0791820 | 0.831402 | 1.703404e-55 | -8.615850e-47 |
| Msa0097990 | Msa0791820 | 0.830897 | 2.266714e-55 | -8.615850e-47 |
| Msa0099510 | Msa0791820 | 0.947945 | 2.494893e-106 | -8.615850e-47 |
| Msa0104610 | Msa0791820 | 0.808358 | 3.221332e-50 | -8.615850e-47 |
| Msa0120340 | Msa0791820 | 0.813009 | 3.178597e-51 | -8.615850e-47 |
| Msa0603670 | Msa0791820 | 0.807971 | 3.894291e-50 | -8.615850e-47 |
| Msa0607340 | Msa0791820 | -0.809183 | 2.146239e-50 | -8.615850e-47 |
| Msa0608710 | Msa0791820 | 0.806937 | 6.454797e-50 | -8.615850e-47 |
| Msa0614990 | Msa0791820 | 0.815146 | 1.073734e-51 | -8.615850e-47 |
| Msa0638280 | Msa0791820 | 0.803826 | 2.896512e-49 | -8.615850e-47 |
| Msa0638320 | Msa0791820 | 0.813636 | 2.314825e-51 | -8.615850e-47 |
| Msa0647450 | Msa0791820 | -0.831783 | 1.372775e-55 | -8.615850e-47 |
| Msa0657460 | Msa0791820 | -0.800075 | 1.708380e-48 | -8.615850e-47 |
| Msa0661190 | Msa0791820 | -0.821090 | 4.857548e-53 | -8.615850e-47 |
| Msa0669850 | Msa0791820 | 0.836567 | 8.677614e-57 | -8.615850e-47 |
| Msa0677270 | Msa0791820 | 0.817527 | 3.148982e-52 | -8.615850e-47 |
| Msa0677770 | Msa0791820 | 0.804664 | 1.937927e-49 | -8.615850e-47 |
| Msa0684180 | Msa0791820 | -0.803540 | 3.320076e-49 | -8.615850e-47 |
| Msa0694840 | Msa0791820 | 0.818377 | 2.023601e-52 | -8.615850e-47 |
| Msa0705600 | Msa0791820 | 0.801401 | 9.162360e-49 | -8.615850e-47 |
| Msa0716840 | Msa0791820 | 0.801419 | 9.086730e-49 | -8.615850e-47 |
| Msa0726830 | Msa0791820 | 0.807863 | 4.106949e-50 | -8.615850e-47 |
| Msa0743260 | Msa0791820 | 0.864914 | 8.628340e-65 | -8.615850e-47 |
| Msa0754720 | Msa0791820 | -0.831390 | 1.715603e-55 | -8.615850e-47 |
| Msa0756630 | Msa0791820 | -0.808314 | 3.290795e-50 | -8.615850e-47 |
| Msa0770200 | Msa0791820 | 0.801617 | 8.274919e-49 | -8.615850e-47 |
| Msa0774750 | Msa0791820 | 0.806243 | 9.040576e-50 | -8.615850e-47 |
| Msa0784860 | Msa0791820 | 0.812852 | 3.441103e-51 | -8.615850e-47 |
| Msa0791820 | Msa0792090 | 0.817055 | 4.020932e-52 | -8.615850e-47 |
| Msa0791820 | Msa0793390 | 0.808838 | 2.544108e-50 | -8.615850e-47 |
| Msa0791820 | Msa0799010 | -0.810307 | 1.230230e-50 | -8.615850e-47 |
| Msa0791820 | Msa0805500 | 0.805616 | 1.225098e-49 | -8.615850e-47 |
| Msa0791820 | Msa0806920 | 0.803690 | 3.091159e-49 | -8.615850e-47 |
| Msa0791820 | Msa0812290 | 0.807202 | 5.671607e-50 | -8.615850e-47 |
| Msa0791820 | Msa0820530 | -0.805324 | 1.410036e-49 | -8.615850e-47 |
| Msa0791820 | Msa0860900 | -0.843421 | 1.416199e-58 | -8.615850e-47 |
| Msa0791820 | Msa0864470 | -0.831750 | 1.398839e-55 | -8.615850e-47 |
| Msa0791820 | Msa0874500 | 0.864381 | 1.267148e-64 | -8.615850e-47 |
| Msa0791820 | Msa0874570 | 0.816802 | 4.582883e-52 | -8.615850e-47 |
| Msa0791820 | Msa0885880 | 0.801997 | 6.914018e-49 | -8.615850e-47 |
| Msa0791820 | Msa0895030 | 0.800845 | 1.190244e-48 | -8.615850e-47 |
| Msa0791820 | Msa0895310 | 0.812501 | 4.107419e-51 | -8.615850e-47 |
| Msa0791820 | Msa0899240 | -0.811169 | 8.008044e-51 | -8.615850e-47 |
| Msa0791820 | Msa0901320 | 0.802032 | 6.801497e-49 | -8.615850e-47 |
| Msa0791820 | Msa0908170 | 0.820644 | 6.150767e-53 | -8.615850e-47 |
| Msa0791820 | Msa0909000 | -0.809847 | 1.545340e-50 | -8.615850e-47 |
| Msa0791820 | Msa0933290 | 0.810314 | 1.225935e-50 | -8.615850e-47 |
| Msa0791820 | Msa0935850 | 0.825418 | 4.739033e-54 | -8.615850e-47 |
| Msa0791820 | Msa0942550 | -0.807779 | 4.278039e-50 | -8.615850e-47 |
| Msa0791820 | Msa0942560 | -0.804695 | 1.908951e-49 | -8.615850e-47 |
| Msa0791820 | Msa0945100 | 0.809335 | 1.991065e-50 | -8.615850e-47 |
| Msa0791820 | Msa0970420 | 0.811600 | 6.456795e-51 | -8.615850e-47 |
| Msa0791820 | Msa0976250 | 0.806987 | 6.299268e-50 | -8.615850e-47 |
| Msa0791820 | Msa0982270 | 0.819679 | 1.023084e-52 | -8.615850e-47 |
| Msa0791820 | Msa0992490 | -0.818187 | 2.233760e-52 | -8.615850e-47 |
| Msa0791820 | Msa0994390 | 0.817901 | 2.593032e-52 | -8.615850e-47 |
| Msa0791820 | Msa1002600 | -0.821772 | 3.379320e-53 | -8.615850e-47 |
| Msa0791820 | Msa1006850 | 0.805126 | 1.551286e-49 | -8.615850e-47 |
| Msa0791820 | Msa1010800 | 0.807439 | 5.051809e-50 | -8.615850e-47 |
| Msa0791820 | Msa1012830 | 0.825738 | 3.980441e-54 | -8.615850e-47 |
| Msa0791820 | Msa1015060 | 0.806019 | 1.007882e-49 | -8.615850e-47 |
| Msa0791820 | Msa1029080 | -0.803374 | 3.593684e-49 | -8.615850e-47 |
| Msa0791820 | Msa1039880 | 0.822238 | 2.635503e-53 | -8.615850e-47 |
| Msa0791820 | Msa1040800 | 0.824017 | 1.013730e-53 | -8.615850e-47 |
| Msa0791820 | Msa1040890 | 0.808767 | 2.634130e-50 | -8.615850e-47 |
| Msa0791820 | Msa1047720 | 0.827264 | 1.722046e-54 | -8.615850e-47 |
| Msa0791820 | Msa1052390 | 0.802088 | 6.623402e-49 | -8.615850e-47 |
| Msa0791820 | Msa1060070 | 0.802338 | 5.883754e-49 | -8.615850e-47 |
| Msa0791820 | Msa1069660 | -0.823611 | 1.261705e-53 | -8.615850e-47 |
| Msa0791820 | Msa1072460 | -0.847052 | 1.475428e-59 | -8.615850e-47 |
| Msa0791820 | Msa1077670 | 0.818821 | 1.604802e-52 | -8.615850e-47 |
| Msa0791820 | Msa1079370 | -0.825715 | 4.030937e-54 | -8.615850e-47 |
| Msa0791820 | Msa1089840 | 0.836783 | 7.641678e-57 | -8.615850e-47 |
| Msa0791820 | Msa1094430 | 0.800424 | 1.450575e-48 | -8.615850e-47 |
| Msa0791820 | Msa1126120 | -0.833589 | 4.890652e-56 | -8.615850e-47 |
| Msa0791820 | Msa1130210 | -0.816592 | 5.108791e-52 | -8.615850e-47 |
| Msa0791820 | Msa1135880 | 0.804981 | 1.664100e-49 | -8.615850e-47 |
| Msa0791820 | Msa1143930 | -0.802415 | 5.672953e-49 | -8.615850e-47 |
| Msa0791820 | Msa1171870 | 0.829395 | 5.272428e-55 | -8.615850e-47 |
| Msa0791820 | Msa1172130 | -0.809547 | 1.793048e-50 | -8.615850e-47 |
| Msa0791820 | Msa1178370 | 0.803741 | 3.015802e-49 | -8.615850e-47 |
| Msa0791820 | Msa1182630 | 0.801024 | 1.094460e-48 | -8.615850e-47 |
| Msa0791820 | Msa1190890 | -0.849701 | 2.730989e-60 | -8.615850e-47 |
| Msa0791820 | Msa1207460 | -0.817962 | 2.511939e-52 | -8.615850e-47 |
| Msa0791820 | Msa1211050 | -0.802695 | 4.964764e-49 | -8.615850e-47 |
| Msa0791820 | Msa1217830 | 0.801811 | 7.551177e-49 | -8.615850e-47 |
| Msa0791820 | Msa1217860 | 0.800806 | 1.212756e-48 | -8.615850e-47 |
| Msa0791820 | Msa1219810 | 0.843578 | 1.285483e-58 | -8.615850e-47 |
| Msa0791820 | Msa1233500 | 0.805556 | 1.260683e-49 | -8.615850e-47 |
| Msa0791820 | Msa1233890 | 0.803595 | 3.234816e-49 | -8.615850e-47 |
| Msa0791820 | Msa1234730 | 0.807583 | 4.709354e-50 | -8.615850e-47 |
| Msa0791820 | Msa1236070 | -0.828703 | 7.756843e-55 | -8.615850e-47 |
| Msa0791820 | Msa1249920 | 0.802739 | 4.862374e-49 | -8.615850e-47 |
| Msa0791820 | Msa1267060 | 0.803195 | 3.913548e-49 | -8.615850e-47 |
| Msa0791820 | Msa1267260 | 0.831983 | 1.225076e-55 | -8.615850e-47 |
| Msa0791820 | Msa1269300 | 0.832674 | 8.262696e-56 | -8.615850e-47 |
| Msa0791820 | Msa1269580 | -0.802631 | 5.120128e-49 | -8.615850e-47 |
| Msa0791820 | Msa1271210 | 0.806856 | 6.711613e-50 | -8.615850e-47 |
| Msa0791820 | Msa1300350 | -0.808247 | 3.401450e-50 | -8.615850e-47 |
| Msa0791820 | Msa1302190 | -0.821666 | 3.576368e-53 | -8.615850e-47 |
| Msa0791820 | Msa1303160 | 0.805818 | 1.111123e-49 | -8.615850e-47 |
| Msa0791820 | Msa1306430 | 0.828960 | 6.721545e-55 | -8.615850e-47 |
| Msa0791820 | Msa1307740 | 0.820610 | 6.261371e-53 | -8.615850e-47 |
| Msa0791820 | Msa1308080 | -0.800942 | 1.137615e-48 | -8.615850e-47 |
| Msa0791820 | Msa1315110 | 0.815707 | 8.052126e-52 | -8.615850e-47 |
| Msa0791820 | Msa1322190 | 0.804734 | 1.873727e-49 | -8.615850e-47 |
| Msa0791820 | Msa1330890 | -0.816724 | 4.771739e-52 | -8.615850e-47 |
| Msa0791820 | Msa1332870 | -0.815648 | 8.302488e-52 | -8.615850e-47 |
| Msa0791820 | Msa1342640 | -0.803629 | 3.181749e-49 | -8.615850e-47 |
| Msa0791820 | Msa1358610 | -0.806494 | 8.005502e-50 | -8.615850e-47 |
| Msa0791820 | Msa1359630 | 0.806378 | 8.468812e-50 | -8.615850e-47 |
| Msa0791820 | Msa1359650 | -0.807161 | 5.786803e-50 | -8.615850e-47 |
| Msa0791820 | Msa1363700 | 0.840263 | 9.663400e-58 | -8.615850e-47 |
| Msa0791820 | Msa1371090 | 0.861416 | 1.041553e-63 | -8.615850e-47 |
| Msa0791820 | Msa1388860 | 0.824430 | 8.107080e-54 | -8.615850e-47 |
| Msa0791820 | Msa1389780 | 0.813065 | 3.090460e-51 | -8.615850e-47 |
| Msa0791820 | Msa1403580 | -0.805406 | 1.355834e-49 | -8.615850e-47 |
| Msa0791820 | Msa1403930 | -0.841001 | 6.190023e-58 | -8.615850e-47 |
| Msa0791820 | Msa1404540 | 0.817883 | 2.616918e-52 | -8.615850e-47 |
| Msa0791820 | Msa1417810 | -0.814765 | 1.303825e-51 | -8.615850e-47 |
| Msa0791820 | Msa1417830 | -0.817641 | 2.968258e-52 | -8.615850e-47 |
| Msa0791820 | Msa1431060 | 0.814486 | 1.503075e-51 | -8.615850e-47 |
| Msa0791820 | Msa1438700 | 0.841109 | 5.799042e-58 | -8.615850e-47 |
| Msa0791820 | Msa1439960 | 0.814110 | 1.819899e-51 | -8.615850e-47 |
| Msa0791820 | Msa1440000 | 0.807183 | 5.724135e-50 | -8.615850e-47 |
| Msa0791820 | Msa1442220 | -0.822883 | 1.866753e-53 | -8.615850e-47 |
| Msa0791820 | Msa1442700 | 0.807959 | 3.917828e-50 | -8.615850e-47 |
| Msa0791820 | Msa1444310 | 0.804413 | 2.186467e-49 | -8.615850e-47 |
| Msa0791820 | Msa1445400 | -0.816853 | 4.463935e-52 | -8.615850e-47 |
| Msa0791820 | Msa1445420 | -0.823320 | 1.475657e-53 | -8.615850e-47 |
| Msa0791820 | Msa1447110 | 0.822094 | 2.847526e-53 | -8.615850e-47 |
| Msa0791820 | Msa1449350 | -0.808863 | 2.512864e-50 | -8.615850e-47 |
| Msa0791820 | Msa1452470 | 0.802141 | 6.457615e-49 | -8.615850e-47 |
| Msa0791820 | Msa1459760 | -0.851760 | 7.196309e-61 | -8.615850e-47 |
| Msa0791820 | Msa1461280 | 0.803537 | 3.324964e-49 | -8.615850e-47 |
| Msa0791820 | Msa1465960 | 0.835019 | 2.140959e-56 | -8.615850e-47 |
| Msa0131450 | Msa0791820 | 0.808475 | 3.041219e-50 | -8.615850e-47 |
| Msa0140510 | Msa0791820 | -0.810541 | 1.095000e-50 | -8.615850e-47 |
| Msa0140520 | Msa0791820 | -0.817361 | 3.431599e-52 | -8.615850e-47 |
| Msa0148120 | Msa0791820 | 0.939107 | 2.212603e-99 | -8.615850e-47 |
| Msa0154770 | Msa0791820 | 0.814926 | 1.201114e-51 | -8.615850e-47 |
| Msa0155880 | Msa0791820 | 0.800201 | 1.610718e-48 | -8.615850e-47 |
| Msa0156650 | Msa0791820 | -0.829899 | 3.975683e-55 | -8.615850e-47 |
| Msa0162770 | Msa0791820 | -0.844652 | 6.621922e-59 | -8.615850e-47 |
| Msa0168640 | Msa0791820 | -0.811917 | 5.507328e-51 | -8.615850e-47 |
| Msa0172350 | Msa0791820 | 0.807166 | 5.772605e-50 | -8.615850e-47 |
| Msa0172780 | Msa0791820 | 0.814737 | 1.322649e-51 | -8.615850e-47 |
| Msa0173740 | Msa0791820 | 0.807213 | 5.641871e-50 | -8.615850e-47 |
| Msa0173820 | Msa0791820 | 0.803775 | 2.967856e-49 | -8.615850e-47 |
| Msa0177700 | Msa0791820 | -0.801877 | 7.316563e-49 | -8.615850e-47 |
| Msa0183460 | Msa0791820 | 0.824800 | 6.634371e-54 | -8.615850e-47 |
| Msa0196020 | Msa0791820 | -0.819868 | 9.263560e-53 | -8.615850e-47 |
| Msa0208810 | Msa0791820 | 0.852551 | 4.287743e-61 | -8.615850e-47 |
| Msa0212750 | Msa0791820 | -0.817496 | 3.199982e-52 | -8.615850e-47 |
| Msa0214710 | Msa0791820 | 0.805442 | 1.332158e-49 | -8.615850e-47 |
| Msa0219070 | Msa0791820 | 0.803745 | 3.010648e-49 | -8.615850e-47 |
| Msa0223100 | Msa0791820 | 0.811326 | 7.403785e-51 | -8.615850e-47 |
| Msa0223290 | Msa0791820 | 0.843224 | 1.598512e-58 | -8.615850e-47 |
| Msa0223380 | Msa0791820 | 0.833396 | 5.463194e-56 | -8.615850e-47 |
| Msa0227400 | Msa0791820 | 0.822630 | 2.137459e-53 | -8.615850e-47 |
| Msa0229490 | Msa0791820 | -0.813184 | 2.911108e-51 | -8.615850e-47 |
| Msa0233610 | Msa0791820 | 0.823683 | 1.213815e-53 | -8.615850e-47 |
| Msa0372670 | Msa0791820 | 0.805618 | 1.224004e-49 | -8.615850e-47 |
| Msa0377530 | Msa0791820 | 0.848104 | 7.580767e-60 | -8.615850e-47 |
| Msa0380040 | Msa0791820 | 0.838845 | 2.257334e-57 | -8.615850e-47 |
| Msa0382130 | Msa0791820 | 0.800201 | 1.610540e-48 | -8.615850e-47 |
| Msa0388030 | Msa0791820 | -0.804560 | 2.037262e-49 | -8.615850e-47 |
| Msa0388040 | Msa0791820 | -0.800241 | 1.580416e-48 | -8.615850e-47 |
| Msa0389810 | Msa0791820 | 0.819103 | 1.384305e-52 | -8.615850e-47 |
| Msa0392940 | Msa0791820 | 0.806724 | 7.159293e-50 | -8.615850e-47 |
| Msa0394340 | Msa0791820 | 0.826922 | 2.078819e-54 | -8.615850e-47 |
| Msa0404000 | Msa0791820 | 0.840188 | 1.010610e-57 | -8.615850e-47 |
| Msa0404030 | Msa0791820 | 0.827703 | 1.351521e-54 | -8.615850e-47 |
| Msa0414950 | Msa0791820 | -0.837958 | 3.823157e-57 | -8.615850e-47 |
| Msa0419520 | Msa0791820 | 0.828735 | 7.622038e-55 | -8.615850e-47 |
| Msa0419640 | Msa0791820 | -0.824408 | 8.204446e-54 | -8.615850e-47 |
| Msa0421780 | Msa0791820 | -0.830034 | 3.684726e-55 | -8.615850e-47 |
| Msa0426810 | Msa0791820 | 0.836728 | 7.894441e-57 | -8.615850e-47 |
| Msa0427200 | Msa0791820 | 0.802914 | 4.475647e-49 | -8.615850e-47 |
| Msa0427910 | Msa0791820 | 0.804008 | 2.654172e-49 | -8.615850e-47 |
| Msa0429290 | Msa0791820 | 0.839445 | 1.577745e-57 | -8.615850e-47 |
| Msa0429950 | Msa0791820 | 0.809185 | 2.144239e-50 | -8.615850e-47 |
| Msa0442200 | Msa0791820 | 0.813240 | 2.828899e-51 | -8.615850e-47 |
| Msa0462540 | Msa0791820 | 0.800282 | 1.550574e-48 | -8.615850e-47 |
| Msa0464900 | Msa0791820 | 0.814434 | 1.544115e-51 | -8.615850e-47 |
| Msa0465550 | Msa0791820 | 0.833140 | 6.326217e-56 | -8.615850e-47 |
| Msa0467900 | Msa0791820 | -0.839536 | 1.494431e-57 | -8.615850e-47 |
| Msa0467960 | Msa0791820 | -0.812899 | 3.361050e-51 | -8.615850e-47 |
| Msa0468130 | Msa0791820 | 0.825296 | 5.065655e-54 | -8.615850e-47 |
| Msa0469790 | Msa0791820 | 0.806989 | 6.291436e-50 | -8.615850e-47 |
| Msa0473240 | Msa0791820 | 0.819491 | 1.129767e-52 | -8.615850e-47 |
| Msa0475580 | Msa0791820 | 0.837242 | 5.833225e-57 | -8.615850e-47 |
| Msa0480320 | Msa0791820 | 0.808578 | 2.890610e-50 | -8.615850e-47 |
| Msa0239490 | Msa0791820 | 0.814777 | 1.295867e-51 | -8.615850e-47 |
| Msa0242680 | Msa0791820 | 0.804957 | 1.682936e-49 | -8.615850e-47 |
| Msa0260210 | Msa0791820 | 0.823650 | 1.235432e-53 | -8.615850e-47 |
| Msa0260810 | Msa0791820 | 0.806106 | 9.663273e-50 | -8.615850e-47 |
| Msa0265380 | Msa0791820 | 0.807534 | 4.823977e-50 | -8.615850e-47 |
| Msa0268090 | Msa0791820 | 0.858386 | 8.539802e-63 | -8.615850e-47 |
| Msa0269450 | Msa0791820 | 0.807964 | 3.908482e-50 | -8.615850e-47 |
| Msa0271360 | Msa0791820 | 0.801836 | 7.460346e-49 | -8.615850e-47 |
| Msa0272480 | Msa0791820 | -0.801312 | 9.552984e-49 | -8.615850e-47 |
| Msa0275400 | Msa0791820 | -0.817781 | 2.760346e-52 | -8.615850e-47 |
| Msa0279210 | Msa0791820 | -0.834629 | 2.683675e-56 | -8.615850e-47 |
| Msa0288240 | Msa0791820 | 0.809466 | 1.866526e-50 | -8.615850e-47 |
| Msa0288730 | Msa0791820 | 0.835441 | 1.674722e-56 | -8.615850e-47 |
| Msa0295000 | Msa0791820 | -0.803063 | 4.169254e-49 | -8.615850e-47 |
| Msa0302650 | Msa0791820 | 0.821533 | 3.838847e-53 | -8.615850e-47 |
| Msa0303360 | Msa0791820 | 0.807738 | 4.364589e-50 | -8.615850e-47 |
| Msa0304290 | Msa0791820 | 0.836566 | 8.680900e-57 | -8.615850e-47 |
| Msa0304330 | Msa0791820 | 0.842324 | 2.771633e-58 | -8.615850e-47 |
| Msa0305890 | Msa0791820 | 0.838484 | 2.797822e-57 | -8.615850e-47 |
| Msa0308220 | Msa0791820 | 0.804767 | 1.844190e-49 | -8.615850e-47 |
| Msa0318970 | Msa0791820 | -0.827500 | 1.511399e-54 | -8.615850e-47 |
| Msa0320610 | Msa0791820 | 0.801317 | 9.533153e-49 | -8.615850e-47 |
| Msa0326670 | Msa0791820 | 0.812306 | 4.529766e-51 | -8.615850e-47 |
| Msa0333720 | Msa0791820 | -0.810802 | 9.617205e-51 | -8.615850e-47 |
| Msa0340810 | Msa0791820 | 0.837512 | 4.976029e-57 | -8.615850e-47 |
| Msa0347360 | Msa0791820 | 0.817979 | 2.489700e-52 | -8.615850e-47 |
| Msa0347610 | Msa0791820 | 0.802329 | 5.908122e-49 | -8.615850e-47 |
| Msa0359560 | Msa0791820 | 0.819895 | 9.135468e-53 | -8.615850e-47 |
| Msa0489610 | Msa0791820 | 0.833086 | 6.527990e-56 | -8.615850e-47 |
| Msa0505060 | Msa0791820 | 0.821260 | 4.437688e-53 | -8.615850e-47 |
| Msa0517490 | Msa0791820 | 0.856215 | 3.738866e-62 | -8.615850e-47 |
| Msa0519190 | Msa0791820 | 0.821093 | 4.848777e-53 | -8.615850e-47 |
| Msa0519220 | Msa0791820 | 0.841984 | 3.409819e-58 | -8.615850e-47 |
| Msa0524600 | Msa0791820 | 0.805449 | 1.327692e-49 | -8.615850e-47 |
| Msa0531990 | Msa0791820 | -0.804891 | 1.737356e-49 | -8.615850e-47 |
| Msa0532100 | Msa0791820 | -0.809089 | 2.247917e-50 | -8.615850e-47 |
| Msa0534900 | Msa0791820 | 0.802574 | 5.260219e-49 | -8.615850e-47 |
| Msa0535030 | Msa0791820 | 0.815940 | 7.146061e-52 | -8.615850e-47 |
| Msa0535060 | Msa0791820 | 0.816631 | 5.006536e-52 | -8.615850e-47 |
| Msa0542160 | Msa0791820 | 0.823281 | 1.507364e-53 | -8.615850e-47 |
| Msa0553220 | Msa0791820 | -0.860723 | 1.693566e-63 | -8.615850e-47 |
| Msa0555200 | Msa0791820 | 0.818400 | 1.999813e-52 | -8.615850e-47 |
| Msa0556790 | Msa0791820 | 0.815105 | 1.096309e-51 | -8.615850e-47 |
| Msa0561130 | Msa0791820 | -0.803250 | 3.813829e-49 | -8.615850e-47 |
| Msa0562300 | Msa0791820 | -0.801856 | 7.391021e-49 | -8.615850e-47 |
| Msa0562440 | Msa0791820 | 0.818393 | 2.006933e-52 | -8.615850e-47 |
| Msa0591060 | Msa0791820 | 0.805827 | 1.106177e-49 | -8.615850e-47 |
| Msa0591770 | Msa0791820 | 0.831752 | 1.396853e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCTCGTATTGCGTTTC+TGG | 0.078961 | 5_3:+2862688 | Msa0791820:CDS |
| TTTAATAAAAGTACCTATTA+AGG | 0.203571 | 5_3:+2865905 | Msa0791820:three_prime_UTR |
| CCTAACAAGGACTTCTTAAA+TGG | 0.209426 | 5_3:+2865850 | Msa0791820:three_prime_UTR |
| CCATTTAAGAAGTCCTTGTT+AGG | 0.302390 | 5_3:-2865850 | None:intergenic |
| GGAGTCATTGAGTCCTTAAT+AGG | 0.311466 | 5_3:-2865918 | None:intergenic |
| CCACTTATTTCATCAGCTCT+TGG | 0.313585 | 5_3:-2865748 | None:intergenic |
| CCAATGGCAATACACTAATA+AGG | 0.333548 | 5_3:+2865939 | Msa0791820:three_prime_UTR |
| CACTTATTTCATCAGCTCTT+GGG | 0.335558 | 5_3:-2865747 | None:intergenic |
| TAATGACGTGGCTACTGATA+TGG | 0.339918 | 5_3:+2865723 | Msa0791820:CDS |
| GTATATATATCTCGATAAAT+TGG | 0.353673 | 5_3:-2862636 | None:intergenic |
| ATCGTTCTTCACTTTGTTCA+AGG | 0.368128 | 5_3:+2862817 | Msa0791820:CDS |
| AACAGTGAAGAACCTGAAAA+TGG | 0.369679 | 5_3:-2862786 | None:intergenic |
| TGTTTAATATGTAAAGATAG+TGG | 0.372557 | 5_3:-2865990 | None:intergenic |
| GAAATAAGTGGGAACAAGAA+TGG | 0.424242 | 5_3:+2865760 | Msa0791820:CDS |
| TATACTCAACCCATGAAAAT+CGG | 0.441026 | 5_3:-2865662 | None:intergenic |
| TCGAGATATATATACACTCT+TGG | 0.453771 | 5_3:+2862644 | Msa0791820:CDS |
| CCTTATTAGTGTATTGCCAT+TGG | 0.462794 | 5_3:-2865939 | None:intergenic |
| CACCACTCGTTCTTCATGTT+AGG | 0.479229 | 5_3:+2862733 | Msa0791820:CDS |
| TCTCGTATTGCGTTTCTGGT+TGG | 0.488286 | 5_3:+2862692 | Msa0791820:CDS |
| AAATAAGTGGGAACAAGAAT+GGG | 0.494120 | 5_3:+2865761 | Msa0791820:CDS |
| GCCTCTTACTGAGAAGCAAA+AGG | 0.498437 | 5_3:+2865093 | Msa0791820:CDS |
| GTTTAATATGTAAAGATAGT+GGG | 0.500740 | 5_3:-2865989 | None:intergenic |
| TAGCAAGATCTCGCGTAAGA+AGG | 0.519092 | 5_3:+2865687 | Msa0791820:CDS |
| CGATAAATTGGTGGGTTACG+CGG | 0.536770 | 5_3:-2862624 | None:intergenic |
| GTAATAAAATGTGTACTACT+TGG | 0.542705 | 5_3:-2866050 | None:intergenic |
| CCAAGAGCTGATGAAATAAG+TGG | 0.548552 | 5_3:+2865748 | Msa0791820:CDS |
| CTTGCCTTACGAACACAACA+AGG | 0.548998 | 5_3:-2865511 | None:intergenic |
| TATATATCTCGATAAATTGG+TGG | 0.554956 | 5_3:-2862633 | None:intergenic |
| CATTTAAGAAGTCCTTGTTA+GGG | 0.555602 | 5_3:-2865849 | None:intergenic |
| TTATTACTTCTTTATGCAAG+TGG | 0.560226 | 5_3:+2866066 | Msa0791820:three_prime_UTR |
| GATGGGCCTAGAAGAAGAAA+AGG | 0.562178 | 5_3:+2865783 | Msa0791820:CDS |
| TATTACTTCTTTATGCAAGT+GGG | 0.564425 | 5_3:+2866067 | Msa0791820:three_prime_UTR |
| TTGGTTGCCGATATTCACTC+AGG | 0.577042 | 5_3:+2862663 | Msa0791820:CDS |
| TAAGGACTCAATGACTCCAA+TGG | 0.582041 | 5_3:+2865923 | Msa0791820:three_prime_UTR |
| ATATATCTCGATAAATTGGT+GGG | 0.596774 | 5_3:-2862632 | None:intergenic |
| ACATTAATCAGAATTTGCTA+AGG | 0.598746 | 5_3:+2865003 | Msa0791820:intron |
| AAGTGGGAACAAGAATGGGA+TGG | 0.602710 | 5_3:+2865765 | Msa0791820:CDS |
| AGTGGGAACAAGAATGGGAT+GGG | 0.603182 | 5_3:+2865766 | Msa0791820:CDS |
| TAAGGAAGCAATATGTGTGG+TGG | 0.605756 | 5_3:+2865479 | Msa0791820:CDS |
| TAAATAAGTGATGTGTCATG+TGG | 0.615886 | 5_3:-2865876 | None:intergenic |
| AAATAAGTGATGTGTCATGT+GGG | 0.637170 | 5_3:-2865875 | None:intergenic |
| TTGTTAGGGAACTACCATTG+TGG | 0.643353 | 5_3:-2865835 | None:intergenic |
| ATAATAAAATGTGTACCACT+TGG | 0.644139 | 5_3:-2866091 | None:intergenic |
| CAAGAGCTGATGAAATAAGT+GGG | 0.648536 | 5_3:+2865749 | Msa0791820:CDS |
| ACAATGGTAGTTCCCTAACA+AGG | 0.650300 | 5_3:+2865837 | Msa0791820:three_prime_UTR |
| TTTATGCAAGTGGGACCAAG+TGG | 0.651613 | 5_3:+2866076 | Msa0791820:three_prime_UTR |
| TGCCTAACATGAAGAACGAG+TGG | 0.655381 | 5_3:-2862735 | None:intergenic |
| TTTACTGGTTGATAATGACG+TGG | 0.662198 | 5_3:+2865711 | Msa0791820:CDS |
| AAATAAGGAAGCAATATGTG+TGG | 0.684740 | 5_3:+2865476 | Msa0791820:CDS |
| TTGCCTTACGAACACAACAA+GGG | 0.696788 | 5_3:-2865510 | None:intergenic |
| AGTTATTAGAGCATCCACAA+TGG | 0.718789 | 5_3:+2865821 | Msa0791820:three_prime_UTR |
| AATAAGTGATGTGTCATGTG+GGG | 0.739169 | 5_3:-2865874 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATATATATATTAGCA+TGG | + | chr5_3:2863928-2863947 | Msa0791820:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAAGATG+AGG | - | chr5_3:2864926-2864945 | None:intergenic | 10.0% |
| !!! | ATTATTTTCTATTTTGTTTA+TGG | + | chr5_3:2865362-2865381 | Msa0791820:intron | 10.0% |
| !! | TAAAAATTTAAACAGAAATA+AGG | + | chr5_3:2865461-2865480 | Msa0791820:intron | 10.0% |
| !!! | TTTTATTATTTTTTTAAACG+TGG | + | chr5_3:2866105-2866124 | Msa0791820:three_prime_UTR | 10.0% |
| !!! | TTCATTACTTTTTCAATTAT+AGG | + | chr5_3:2863172-2863191 | Msa0791820:intron | 15.0% |
| !! | AACATATTATTACAACATTA+CGG | - | chr5_3:2863562-2863581 | None:intergenic | 15.0% |
| !! | AAAATAATAGAGAATGAAAT+GGG | - | chr5_3:2864381-2864400 | None:intergenic | 15.0% |
| !! | AAAAAAATAGAGAATGAAAT+GGG | - | chr5_3:2864868-2864887 | None:intergenic | 15.0% |
| !!! | TTTAATAAAAGTACCTATTA+AGG | + | chr5_3:2865905-2865924 | Msa0791820:three_prime_UTR | 15.0% |
| !! | GTATATATATCTCGATAAAT+TGG | - | chr5_3:2862639-2862658 | None:intergenic | 20.0% |
| !!! | TCAATTTGTTCTGAAATTTT+TGG | + | chr5_3:2862940-2862959 | Msa0791820:intron | 20.0% |
| !!! | CAATTTGTTCTGAAATTTTT+GGG | + | chr5_3:2862941-2862960 | Msa0791820:intron | 20.0% |
| !! | ATAAAAATACCTCAAATCAA+AGG | - | chr5_3:2862981-2863000 | None:intergenic | 20.0% |
| !! | ACCTATCAACTAATTAAAAA+AGG | - | chr5_3:2863054-2863073 | None:intergenic | 20.0% |
| !!! | TTTTGAAATTTTGGAGTATA+AGG | + | chr5_3:2863073-2863092 | Msa0791820:intron | 20.0% |
| !!! | TTTGAAATTTTGGAGTATAA+GGG | + | chr5_3:2863074-2863093 | Msa0791820:intron | 20.0% |
| !! | GAAAAAATAAACCAATTCAA+AGG | - | chr5_3:2863107-2863126 | None:intergenic | 20.0% |
| !!! | TCAATCTGTTCTAAATTTTT+TGG | + | chr5_3:2863202-2863221 | Msa0791820:intron | 20.0% |
| !!! | CAATCTGTTCTAAATTTTTT+GGG | + | chr5_3:2863203-2863222 | Msa0791820:intron | 20.0% |
| !!! | AGATTTAAATCCTTTTGAAT+TGG | + | chr5_3:2863230-2863249 | Msa0791820:intron | 20.0% |
| !!! | GATTTAAATCCTTTTGAATT+GGG | + | chr5_3:2863231-2863250 | Msa0791820:intron | 20.0% |
| !!! | ATTTAAATCCTTTTGAATTG+GGG | + | chr5_3:2863232-2863251 | Msa0791820:intron | 20.0% |
| !! | ACTATTATTAAGGACTAATT+TGG | + | chr5_3:2863331-2863350 | Msa0791820:intron | 20.0% |
| !! | AAAGTTAAAAAACAAAGACA+AGG | - | chr5_3:2863362-2863381 | None:intergenic | 20.0% |
| !! | GTGTAGGAAAAAAATTATAT+TGG | - | chr5_3:2863648-2863667 | None:intergenic | 20.0% |
| !! | TATATATATATTAGCATGGT+AGG | + | chr5_3:2863932-2863951 | Msa0791820:intron | 20.0% |
| !!! | CTTCCTTTATTTTGTTAAAT+GGG | - | chr5_3:2864261-2864280 | None:intergenic | 20.0% |
| !!! | TCTTCCTTTATTTTGTTAAA+TGG | - | chr5_3:2864262-2864281 | None:intergenic | 20.0% |
| !! | GAAAATAATAGAGAATGAAA+TGG | - | chr5_3:2864382-2864401 | None:intergenic | 20.0% |
| !! | TGATTACATAAGAAACAAAA+GGG | - | chr5_3:2864486-2864505 | None:intergenic | 20.0% |
| !! | TTGATTACATAAGAAACAAA+AGG | - | chr5_3:2864487-2864506 | None:intergenic | 20.0% |
| !! | ATCAAAACATTAAACAGAAT+TGG | + | chr5_3:2864502-2864521 | Msa0791820:intron | 20.0% |
| !! | GAAAAAAATAGAGAATGAAA+TGG | - | chr5_3:2864869-2864888 | None:intergenic | 20.0% |
| !! | TGATCAAATAAGAAACAAAA+GGG | - | chr5_3:2864981-2865000 | None:intergenic | 20.0% |
| !! | TTGATCAAATAAGAAACAAA+AGG | - | chr5_3:2864982-2865001 | None:intergenic | 20.0% |
| !! | AAAATCTAAATCATAACAGA+TGG | - | chr5_3:2865203-2865222 | None:intergenic | 20.0% |
| !! | AGTTAAAAAAAAAAAAGACG+AGG | - | chr5_3:2865396-2865415 | None:intergenic | 20.0% |
| !! | TAAACAAATAAGAAGTGAAA+GGG | - | chr5_3:2865443-2865462 | None:intergenic | 20.0% |
| !! | TTAAACAAATAAGAAGTGAA+AGG | - | chr5_3:2865444-2865463 | None:intergenic | 20.0% |
| !!! | CATATTTAAGTACTTTTCAT+TGG | - | chr5_3:2865968-2865987 | None:intergenic | 20.0% |
| !! | GTTTAATATGTAAAGATAGT+GGG | - | chr5_3:2865992-2866011 | None:intergenic | 20.0% |
| !! | TGTTTAATATGTAAAGATAG+TGG | - | chr5_3:2865993-2866012 | None:intergenic | 20.0% |
| !!! | TATTACTCATTTTTACAAGT+GGG | + | chr5_3:2866026-2866045 | Msa0791820:three_prime_UTR | 20.0% |
| ! | ATATATCTCGATAAATTGGT+GGG | - | chr5_3:2862635-2862654 | None:intergenic | 25.0% |
| ! | TATATATCTCGATAAATTGG+TGG | - | chr5_3:2862636-2862655 | None:intergenic | 25.0% |
| !!! | TTCTGAAATTTTTGGGATTA+GGG | + | chr5_3:2862948-2862967 | Msa0791820:intron | 25.0% |
| !!! | GCCTTTTTTAATTAGTTGAT+AGG | + | chr5_3:2863050-2863069 | Msa0791820:intron | 25.0% |
| !!! | GTTGATAGGTTTTGAAATTT+TGG | + | chr5_3:2863064-2863083 | Msa0791820:intron | 25.0% |
| ! | TGAAGAAATAAGAAACAGAA+GGG | - | chr5_3:2863407-2863426 | None:intergenic | 25.0% |
| ! | TTGAAGAAATAAGAAACAGA+AGG | - | chr5_3:2863408-2863427 | None:intergenic | 25.0% |
| ! | TCAATTGCTAAGATGAAAAA+AGG | + | chr5_3:2863514-2863533 | Msa0791820:CDS | 25.0% |
| !!! | AAGTAGTGTTGATTAATGAA+AGG | + | chr5_3:2863703-2863722 | Msa0791820:intron | 25.0% |
| !!! | AGTAGTGTTGATTAATGAAA+GGG | + | chr5_3:2863704-2863723 | Msa0791820:intron | 25.0% |
| !!! | TTTTAACTTTTCCGTATAGT+AGG | + | chr5_3:2863755-2863774 | Msa0791820:intron | 25.0% |
| ! | TACATCTAAATTGAGCAATT+TGG | - | chr5_3:2863842-2863861 | None:intergenic | 25.0% |
| ! | AACATACTCATAATCGTTAA+GGG | - | chr5_3:2864007-2864026 | None:intergenic | 25.0% |
| ! | AAACATACTCATAATCGTTA+AGG | - | chr5_3:2864008-2864027 | None:intergenic | 25.0% |
| ! | AGGGTGAGATTATATTAATA+TGG | - | chr5_3:2864467-2864486 | None:intergenic | 25.0% |
| ! | TCTTATCAATATGTTCTATG+CGG | + | chr5_3:2864653-2864672 | Msa0791820:intron | 25.0% |
| ! | TCTATGCGGTTAAATTAATT+TGG | + | chr5_3:2864667-2864686 | Msa0791820:intron | 25.0% |
| !! | AGGTTGCATTTTCATAAAAT+AGG | - | chr5_3:2864771-2864790 | None:intergenic | 25.0% |
| !!! | AGGGTGAGATTATTTTAATA+CGG | - | chr5_3:2864962-2864981 | None:intergenic | 25.0% |
| !!! | ACATTAATCAGAATTTGCTA+AGG | + | chr5_3:2865003-2865022 | Msa0791820:intron | 25.0% |
| ! | AAATCTCAACTATGTTAATG+TGG | + | chr5_3:2865543-2865562 | Msa0791820:intron | 25.0% |
| !!! | CTATTACTCATTTTTACAAG+TGG | + | chr5_3:2866025-2866044 | Msa0791820:three_prime_UTR | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr5_3:2866053-2866072 | None:intergenic | 25.0% |
| ! | TTATTACTTCTTTATGCAAG+TGG | + | chr5_3:2866066-2866085 | Msa0791820:three_prime_UTR | 25.0% |
| ! | TATTACTTCTTTATGCAAGT+GGG | + | chr5_3:2866067-2866086 | Msa0791820:three_prime_UTR | 25.0% |
| ! | ATAATAAAATGTGTACCACT+TGG | - | chr5_3:2866094-2866113 | None:intergenic | 25.0% |
| TCGAGATATATATACACTCT+TGG | + | chr5_3:2862644-2862663 | Msa0791820:CDS | 30.0% | |
| AGAAAAACCTGAGTGAATAT+CGG | - | chr5_3:2862673-2862692 | None:intergenic | 30.0% | |
| ! | TTTGTCTTTGTTCCATTTTC+AGG | + | chr5_3:2862774-2862793 | Msa0791820:CDS | 30.0% |
| ATCACAACTAAGATTGAGAA+AGG | - | chr5_3:2862917-2862936 | None:intergenic | 30.0% | |
| !!! | GTTCTGAAATTTTTGGGATT+AGG | + | chr5_3:2862947-2862966 | Msa0791820:intron | 30.0% |
| !! | GGTTTAAAACCTTTGATTTG+AGG | + | chr5_3:2862969-2862988 | Msa0791820:intron | 30.0% |
| TAATTAAAAAAGGCAGTGTC+GGG | - | chr5_3:2863044-2863063 | None:intergenic | 30.0% | |
| CTAATTAAAAAAGGCAGTGT+CGG | - | chr5_3:2863045-2863064 | None:intergenic | 30.0% | |
| ! | AGGGTTTAAAACCTTTGAAT+TGG | + | chr5_3:2863093-2863112 | Msa0791820:intron | 30.0% |
| !! | GATGATTTTAACGTCAAATG+AGG | - | chr5_3:2863496-2863515 | None:intergenic | 30.0% |
| ! | ATAGAAGTGTAAAAGTGTGT+AGG | - | chr5_3:2863664-2863683 | None:intergenic | 30.0% |
| ! | ACACACTTTTACACTTCTAT+AGG | + | chr5_3:2863664-2863683 | Msa0791820:intron | 30.0% |
| CAATTTGGTACACTGAAAAA+AGG | - | chr5_3:2863827-2863846 | None:intergenic | 30.0% | |
| GTATATGAGACCTTAAAATC+TGG | + | chr5_3:2864040-2864059 | Msa0791820:intron | 30.0% | |
| ! | ATGTAGATCTCCAGATTTTA+AGG | - | chr5_3:2864053-2864072 | None:intergenic | 30.0% |
| AGAAAGTTAGAAGAGTTACA+AGG | + | chr5_3:2864189-2864208 | Msa0791820:intron | 30.0% | |
| AGGCCCATTTAACAAAATAA+AGG | + | chr5_3:2864255-2864274 | Msa0791820:intron | 30.0% | |
| !!! | GGGTTATGTTTATTTTGCTA+TGG | + | chr5_3:2864340-2864359 | Msa0791820:intron | 30.0% |
| GAAGTTGCTAAGAAGAAAAA+AGG | + | chr5_3:2864554-2864573 | Msa0791820:CDS | 30.0% | |
| CATATTAACACTCAATCAAG+AGG | - | chr5_3:2864791-2864810 | None:intergenic | 30.0% | |
| GTGTTAATATGCACATAAGT+TGG | + | chr5_3:2864800-2864819 | Msa0791820:intron | 30.0% | |
| !!! | GCTGTCTTCTATTTTGTTTT+TGG | + | chr5_3:2864405-2864424 | Msa0791820:intron | 30.0% |
| TTCCTAAGAAGCAAAAAGTA+GGG | + | chr5_3:2865056-2865075 | Msa0791820:CDS | 30.0% | |
| TCTTTGCAGTGAAATTAGTT+TGG | + | chr5_3:2865159-2865178 | Msa0791820:intron | 30.0% | |
| ! | CTTTGCAGTGAAATTAGTTT+GGG | + | chr5_3:2865160-2865179 | Msa0791820:intron | 30.0% |
| ! | TTTGCAGTGAAATTAGTTTG+GGG | + | chr5_3:2865161-2865180 | Msa0791820:intron | 30.0% |
| TAAAGAATTGTGTCTTCACA+TGG | - | chr5_3:2865236-2865255 | None:intergenic | 30.0% | |
| GAGCTTGCATTGTAATAAAT+AGG | - | chr5_3:2865265-2865284 | None:intergenic | 30.0% | |
| !! | ACATAAGTTGGTTGTGTTTA+TGG | + | chr5_3:2865293-2865312 | Msa0791820:intron | 30.0% |
| ! | AGGGTGAGTTTCTTTTAATA+CGG | - | chr5_3:2865424-2865443 | None:intergenic | 30.0% |
| AAATAAGGAAGCAATATGTG+TGG | + | chr5_3:2865476-2865495 | Msa0791820:CDS | 30.0% | |
| TATACTCAACCCATGAAAAT+CGG | - | chr5_3:2865665-2865684 | None:intergenic | 30.0% | |
| AAATAAGTGGGAACAAGAAT+GGG | + | chr5_3:2865761-2865780 | Msa0791820:CDS | 30.0% | |
| CATTTAAGAAGTCCTTGTTA+GGG | - | chr5_3:2865852-2865871 | None:intergenic | 30.0% | |
| AAATAAGTGATGTGTCATGT+GGG | - | chr5_3:2865878-2865897 | None:intergenic | 30.0% | |
| TAAATAAGTGATGTGTCATG+TGG | - | chr5_3:2865879-2865898 | None:intergenic | 30.0% | |
| AACAGTGAAGAACCTGAAAA+TGG | - | chr5_3:2862789-2862808 | None:intergenic | 35.0% | |
| ATCGTTCTTCACTTTGTTCA+AGG | + | chr5_3:2862817-2862836 | Msa0791820:CDS | 35.0% | |
| AATTAAAAAAGGCAGTGTCG+GGG | - | chr5_3:2863043-2863062 | None:intergenic | 35.0% | |
| CTTAATAGCCCCAATTCAAA+AGG | - | chr5_3:2863243-2863262 | None:intergenic | 35.0% | |
| ! | CTTTTGAATTGGGGCTATTA+AGG | + | chr5_3:2863241-2863260 | Msa0791820:intron | 35.0% |
| CAACAAAAACGAAGTTGCTA+AGG | + | chr5_3:2863468-2863487 | Msa0791820:CDS | 35.0% | |
| ! | TAACTTTTCCGTATAGTAGG+TGG | + | chr5_3:2863758-2863777 | Msa0791820:intron | 35.0% |
| ATGAGTTATACTGTTACGAC+TGG | - | chr5_3:2864098-2864117 | None:intergenic | 35.0% | |
| AACTCATCTCCAACCATAAA+GGG | - | chr5_3:2864128-2864147 | None:intergenic | 35.0% | |
| TAACTCATCTCCAACCATAA+AGG | - | chr5_3:2864129-2864148 | None:intergenic | 35.0% | |
| AATGATCTGTTTCAGAGGTT+TGG | + | chr5_3:2864163-2864182 | Msa0791820:intron | 35.0% | |
| ATGATCTGTTTCAGAGGTTT+GGG | + | chr5_3:2864164-2864183 | Msa0791820:intron | 35.0% | |
| ! | AAATGACCCGTTTTACTCTA+AGG | + | chr5_3:2864223-2864242 | Msa0791820:intron | 35.0% |
| ! | AATGACCCGTTTTACTCTAA+GGG | + | chr5_3:2864224-2864243 | Msa0791820:intron | 35.0% |
| TTCTGACCCTTAGAGTAAAA+CGG | - | chr5_3:2864233-2864252 | None:intergenic | 35.0% | |
| ! | GAAGAAGTGCAAAGAATAGA+GGG | + | chr5_3:2864277-2864296 | Msa0791820:intron | 35.0% |
| !! | AATGAAATGGGCTGAAAGTA+TGG | - | chr5_3:2864369-2864388 | None:intergenic | 35.0% |
| TGGGCTAAATTTCACTAGTA+TGG | - | chr5_3:2864849-2864868 | None:intergenic | 35.0% | |
| GTTCCTAAGAAGCAAAAAGT+AGG | + | chr5_3:2865055-2865074 | Msa0791820:CDS | 35.0% | |
| CACAACCAACTTATGTGAAA+GGG | - | chr5_3:2865289-2865308 | None:intergenic | 35.0% | |
| ACACAACCAACTTATGTGAA+AGG | - | chr5_3:2865290-2865309 | None:intergenic | 35.0% | |
| !! | TAAGTTGGTTGTGTTTATGG+TGG | + | chr5_3:2865296-2865315 | Msa0791820:intron | 35.0% |
| ATATTAATATCCAACCCCAC+AGG | + | chr5_3:2865630-2865649 | Msa0791820:intron | 35.0% | |
| !!! | AAAGCATTGCCGATTTTCAT+GGG | + | chr5_3:2865653-2865672 | Msa0791820:CDS | 35.0% |
| !! | TTTACTGGTTGATAATGACG+TGG | + | chr5_3:2865711-2865730 | Msa0791820:CDS | 35.0% |
| CACTTATTTCATCAGCTCTT+GGG | - | chr5_3:2865750-2865769 | None:intergenic | 35.0% | |
| CAAGAGCTGATGAAATAAGT+GGG | + | chr5_3:2865749-2865768 | Msa0791820:CDS | 35.0% | |
| GAAATAAGTGGGAACAAGAA+TGG | + | chr5_3:2865760-2865779 | Msa0791820:CDS | 35.0% | |
| ! | AGTTATTAGAGCATCCACAA+TGG | + | chr5_3:2865821-2865840 | Msa0791820:three_prime_UTR | 35.0% |
| CCATTTAAGAAGTCCTTGTT+AGG | - | chr5_3:2865853-2865872 | None:intergenic | 35.0% | |
| CCTAACAAGGACTTCTTAAA+TGG | + | chr5_3:2865850-2865869 | Msa0791820:three_prime_UTR | 35.0% | |
| AATAAGTGATGTGTCATGTG+GGG | - | chr5_3:2865877-2865896 | None:intergenic | 35.0% | |
| CCTTATTAGTGTATTGCCAT+TGG | - | chr5_3:2865942-2865961 | None:intergenic | 35.0% | |
| CCAATGGCAATACACTAATA+AGG | + | chr5_3:2865939-2865958 | Msa0791820:three_prime_UTR | 35.0% | |
| TTTCTCTCGTATTGCGTTTC+TGG | + | chr5_3:2862688-2862707 | Msa0791820:CDS | 40.0% | |
| TCATACGTCCACCTACTATA+CGG | - | chr5_3:2863769-2863788 | None:intergenic | 40.0% | |
| ACTCATGACAATGCCCTTTA+TGG | + | chr5_3:2864112-2864131 | Msa0791820:intron | 40.0% | |
| ATGACAATGCCCTTTATGGT+TGG | + | chr5_3:2864116-2864135 | Msa0791820:intron | 40.0% | |
| GGTTGAATGATCTGTTTCAG+AGG | + | chr5_3:2864158-2864177 | Msa0791820:intron | 40.0% | |
| TTAGAAGAGTTACAAGGCTC+AGG | + | chr5_3:2864195-2864214 | Msa0791820:intron | 40.0% | |
| TCTGACCCTTAGAGTAAAAC+GGG | - | chr5_3:2864232-2864251 | None:intergenic | 40.0% | |
| ! | TTACTCTAAGGGTCAGAACA+AGG | + | chr5_3:2864235-2864254 | Msa0791820:intron | 40.0% |
| ! | GGAAGAAGTGCAAAGAATAG+AGG | + | chr5_3:2864276-2864295 | Msa0791820:intron | 40.0% |
| TGCAAAGAATAGAGGGCTTT+GGG | + | chr5_3:2864284-2864303 | Msa0791820:intron | 40.0% | |
| !!! | CTCCCTACTTTTTGCTTCTT+AGG | - | chr5_3:2865061-2865080 | None:intergenic | 40.0% |
| ! | TCCTTTTGCTTCTCAGTAAG+AGG | - | chr5_3:2865097-2865116 | None:intergenic | 40.0% |
| GTGGTATTGTTGCCATACTT+GGG | + | chr5_3:2865315-2865334 | Msa0791820:intron | 40.0% | |
| TGGGATAAGTTTCCCAAGTA+TGG | - | chr5_3:2865330-2865349 | None:intergenic | 40.0% | |
| TAAGGAAGCAATATGTGTGG+TGG | + | chr5_3:2865479-2865498 | Msa0791820:CDS | 40.0% | |
| TTGCCTTACGAACACAACAA+GGG | - | chr5_3:2865513-2865532 | None:intergenic | 40.0% | |
| !!! | GAAAGCATTGCCGATTTTCA+TGG | + | chr5_3:2865652-2865671 | Msa0791820:CDS | 40.0% |
| TAATGACGTGGCTACTGATA+TGG | + | chr5_3:2865723-2865742 | Msa0791820:CDS | 40.0% | |
| CCACTTATTTCATCAGCTCT+TGG | - | chr5_3:2865751-2865770 | None:intergenic | 40.0% | |
| CCAAGAGCTGATGAAATAAG+TGG | + | chr5_3:2865748-2865767 | Msa0791820:CDS | 40.0% | |
| ! | GCTCTTCCTTTTCTTCTTCT+AGG | - | chr5_3:2865792-2865811 | None:intergenic | 40.0% |
| TTGTTAGGGAACTACCATTG+TGG | - | chr5_3:2865838-2865857 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr5_3:2865837-2865856 | Msa0791820:three_prime_UTR | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr5_3:2865921-2865940 | None:intergenic | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | + | chr5_3:2865923-2865942 | Msa0791820:three_prime_UTR | 40.0% | |
| !! | CGATAAATTGGTGGGTTACG+CGG | - | chr5_3:2862627-2862646 | None:intergenic | 45.0% |
| TTGGTTGCCGATATTCACTC+AGG | + | chr5_3:2862663-2862682 | Msa0791820:CDS | 45.0% | |
| !! | TCTCGTATTGCGTTTCTGGT+TGG | + | chr5_3:2862692-2862711 | Msa0791820:CDS | 45.0% |
| CACCACTCGTTCTTCATGTT+AGG | + | chr5_3:2862733-2862752 | Msa0791820:CDS | 45.0% | |
| TGCCTAACATGAAGAACGAG+TGG | - | chr5_3:2862738-2862757 | None:intergenic | 45.0% | |
| TGCCTAGAATTAAGCATGCC+AGG | + | chr5_3:2863585-2863604 | Msa0791820:intron | 45.0% | |
| CTCCTGGCATGCTTAATTCT+AGG | - | chr5_3:2863590-2863609 | None:intergenic | 45.0% | |
| ACTGGAATCACAGGATCGAT+TGG | - | chr5_3:2864080-2864099 | None:intergenic | 45.0% | |
| ACTGTTACGACTGGAATCAC+AGG | - | chr5_3:2864089-2864108 | None:intergenic | 45.0% | |
| GGAGATGAGTTACAGATTGC+AGG | + | chr5_3:2864137-2864156 | Msa0791820:intron | 45.0% | |
| GTGCAAAGAATAGAGGGCTT+TGG | + | chr5_3:2864283-2864302 | Msa0791820:intron | 45.0% | |
| !! | AAGAATAGAGGGCTTTGGGA+AGG | + | chr5_3:2864288-2864307 | Msa0791820:intron | 45.0% |
| !! | AGAATAGAGGGCTTTGGGAA+GGG | + | chr5_3:2864289-2864308 | Msa0791820:intron | 45.0% |
| GCCTCTTACTGAGAAGCAAA+AGG | + | chr5_3:2865093-2865112 | Msa0791820:CDS | 45.0% | |
| GCTCACCCTTTCACATAAGT+TGG | + | chr5_3:2865281-2865300 | Msa0791820:intron | 45.0% | |
| GGTGGTATTGTTGCCATACT+TGG | + | chr5_3:2865314-2865333 | Msa0791820:intron | 45.0% | |
| ! | CAACCCTTGTTGTGTTCGTA+AGG | + | chr5_3:2865507-2865526 | Msa0791820:intron | 45.0% |
| CTTGCCTTACGAACACAACA+AGG | - | chr5_3:2865514-2865533 | None:intergenic | 45.0% | |
| AATCGGCAATGCTTTCCTGT+GGG | - | chr5_3:2865648-2865667 | None:intergenic | 45.0% | |
| AAATCGGCAATGCTTTCCTG+TGG | - | chr5_3:2865649-2865668 | None:intergenic | 45.0% | |
| TAGCAAGATCTCGCGTAAGA+AGG | + | chr5_3:2865687-2865706 | Msa0791820:CDS | 45.0% | |
| ! | CTCGCGTAAGAAGGTTTTAC+TGG | + | chr5_3:2865696-2865715 | Msa0791820:CDS | 45.0% |
| AAGTGGGAACAAGAATGGGA+TGG | + | chr5_3:2865765-2865784 | Msa0791820:CDS | 45.0% | |
| AGTGGGAACAAGAATGGGAT+GGG | + | chr5_3:2865766-2865785 | Msa0791820:CDS | 45.0% | |
| GATGGGCCTAGAAGAAGAAA+AGG | + | chr5_3:2865783-2865802 | Msa0791820:CDS | 45.0% | |
| TTTATGCAAGTGGGACCAAG+TGG | + | chr5_3:2866076-2866095 | Msa0791820:three_prime_UTR | 45.0% | |
| !! | TATTATTATTACTATTATTA+AGG | + | chr5_3:2863321-2863340 | Msa0791820:intron | 5.0% |
| !! | AAATAATAGAAATATAAAAT+GGG | - | chr5_3:2865349-2865368 | None:intergenic | 5.0% |
| !! | AAAATAATAGAAATATAAAA+TGG | - | chr5_3:2865350-2865369 | None:intergenic | 5.0% |
| AACACGTGTCGTACAGGTGT+CGG | - | chr5_3:2863614-2863633 | None:intergenic | 50.0% | |
| ACACCTGTACGACACGTGTT+AGG | + | chr5_3:2863614-2863633 | Msa0791820:intron | 50.0% | |
| TTGCCTAACACGTGTCGTAC+AGG | - | chr5_3:2863620-2863639 | None:intergenic | 50.0% | |
| GTAGGTGGACGTATGACATG+AGG | + | chr5_3:2863773-2863792 | Msa0791820:intron | 50.0% | |
| TGGGGGGTTATGCACATAAG+TGG | + | chr5_3:2864319-2864338 | Msa0791820:intron | 50.0% | |
| GGGGGGTTATGCACATAAGT+GGG | + | chr5_3:2864320-2864339 | Msa0791820:intron | 50.0% | |
| !!! | GCTGTTTTTTGAGCGACGCT+CGG | - | chr5_3:2864528-2864547 | None:intergenic | 50.0% |
| ATCGGCAATGCTTTCCTGTG+GGG | - | chr5_3:2865647-2865666 | None:intergenic | 50.0% | |
| !! | ATAGAGGGCTTTGGGAAGGG+AGG | + | chr5_3:2864292-2864311 | Msa0791820:intron | 55.0% |
| !! | TAGAGGGCTTTGGGAAGGGA+GGG | + | chr5_3:2864293-2864312 | Msa0791820:intron | 55.0% |
| !! | CTTTGGGAAGGGAGGGCATT+GGG | + | chr5_3:2864300-2864319 | Msa0791820:intron | 55.0% |
| !! | TTTGGGAAGGGAGGGCATTG+GGG | + | chr5_3:2864301-2864320 | Msa0791820:intron | 55.0% |
| GCAATGCTTTCCTGTGGGGT+TGG | - | chr5_3:2865643-2865662 | None:intergenic | 55.0% | |
| !! | TCGTACAGGTGTCGGACTCC+TGG | - | chr5_3:2863606-2863625 | None:intergenic | 60.0% |
| !! | GCTTTGGGAAGGGAGGGCAT+TGG | + | chr5_3:2864299-2864318 | Msa0791820:intron | 60.0% |
| !! | TTGGGAAGGGAGGGCATTGG+GGG | + | chr5_3:2864302-2864321 | Msa0791820:intron | 60.0% |
| !! | TGGGAAGGGAGGGCATTGGG+GGG | + | chr5_3:2864303-2864322 | Msa0791820:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 2862619 | 2866128 | 2862619 | ID=Msa0791820;Name=Msa0791820 |
| chr5_3 | mRNA | 2862619 | 2866128 | 2862619 | ID=Msa0791820-mRNA-1;Parent=Msa0791820;Name=Msa0791820-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.8|0.66|1|0.6|0.83|6|312|233 |
| chr5_3 | exon | 2862619 | 2862838 | 2862619 | ID=Msa0791820-mRNA-1:exon:1180;Parent=Msa0791820-mRNA-1 |
| chr5_3 | exon | 2863440 | 2863541 | 2863440 | ID=Msa0791820-mRNA-1:exon:1181;Parent=Msa0791820-mRNA-1 |
| chr5_3 | exon | 2864519 | 2864581 | 2864519 | ID=Msa0791820-mRNA-1:exon:1182;Parent=Msa0791820-mRNA-1 |
| chr5_3 | exon | 2865014 | 2865121 | 2865014 | ID=Msa0791820-mRNA-1:exon:1183;Parent=Msa0791820-mRNA-1 |
| chr5_3 | exon | 2865476 | 2865519 | 2865476 | ID=Msa0791820-mRNA-1:exon:1184;Parent=Msa0791820-mRNA-1 |
| chr5_3 | exon | 2865652 | 2866128 | 2865652 | ID=Msa0791820-mRNA-1:exon:1185;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2862619 | 2862838 | 2862619 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2863440 | 2863541 | 2863440 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2864519 | 2864581 | 2864519 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2865014 | 2865121 | 2865014 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2865476 | 2865519 | 2865476 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | CDS | 2865652 | 2865816 | 2865652 | ID=Msa0791820-mRNA-1:cds;Parent=Msa0791820-mRNA-1 |
| chr5_3 | three_prime_UTR | 2865817 | 2866128 | 2865817 | ID=Msa0791820-mRNA-1:three_prime_utr;Parent=Msa0791820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
