Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388620 | XP_013450287.2 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388620 | A0A396H8I4 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0388620 | 0.865778 | 4.612315e-65 | -8.615850e-47 |
| Msa0016530 | Msa0388620 | 0.800663 | 1.296523e-48 | -8.615850e-47 |
| Msa0018920 | Msa0388620 | 0.856316 | 3.493843e-62 | -8.615850e-47 |
| Msa0020540 | Msa0388620 | 0.810632 | 1.046819e-50 | -8.615850e-47 |
| Msa0027800 | Msa0388620 | 0.848371 | 6.396859e-60 | -8.615850e-47 |
| Msa0030070 | Msa0388620 | 0.858271 | 9.238040e-63 | -8.615850e-47 |
| Msa0032980 | Msa0388620 | 0.850275 | 1.886521e-60 | -8.615850e-47 |
| Msa0040640 | Msa0388620 | 0.854001 | 1.646119e-61 | -8.615850e-47 |
| Msa0044780 | Msa0388620 | -0.812072 | 5.095798e-51 | -8.615850e-47 |
| Msa0045620 | Msa0388620 | 0.823042 | 1.713625e-53 | -8.615850e-47 |
| Msa0050150 | Msa0388620 | 0.823106 | 1.656109e-53 | -8.615850e-47 |
| Msa0050530 | Msa0388620 | 0.866695 | 2.362788e-65 | -8.615850e-47 |
| Msa0078130 | Msa0388620 | 0.831243 | 1.864329e-55 | -8.615850e-47 |
| Msa0079410 | Msa0388620 | 0.803748 | 3.006573e-49 | -8.615850e-47 |
| Msa0080370 | Msa0388620 | 0.835953 | 1.242671e-56 | -8.615850e-47 |
| Msa0080440 | Msa0388620 | 0.836256 | 1.040817e-56 | -8.615850e-47 |
| Msa0090440 | Msa0388620 | 0.842877 | 1.977333e-58 | -8.615850e-47 |
| Msa0091350 | Msa0388620 | 0.858845 | 6.228648e-63 | -8.615850e-47 |
| Msa0094180 | Msa0388620 | 0.831091 | 2.031653e-55 | -8.615850e-47 |
| Msa0100600 | Msa0388620 | 0.871366 | 7.221602e-67 | -8.615850e-47 |
| Msa0100890 | Msa0388620 | 0.865023 | 7.975781e-65 | -8.615850e-47 |
| Msa0106630 | Msa0388620 | 0.822815 | 1.935987e-53 | -8.615850e-47 |
| Msa0109730 | Msa0388620 | 0.830902 | 2.261020e-55 | -8.615850e-47 |
| Msa0125590 | Msa0388620 | 0.864299 | 1.343258e-64 | -8.615850e-47 |
| Msa0127340 | Msa0388620 | 0.850899 | 1.260092e-60 | -8.615850e-47 |
| Msa0129960 | Msa0388620 | 0.803770 | 2.974340e-49 | -8.615850e-47 |
| Msa0131810 | Msa0388620 | 0.822680 | 2.081361e-53 | -8.615850e-47 |
| Msa0153210 | Msa0388620 | 0.819780 | 9.705830e-53 | -8.615850e-47 |
| Msa0156050 | Msa0388620 | 0.808725 | 2.688969e-50 | -8.615850e-47 |
| Msa0156090 | Msa0388620 | 0.823961 | 1.044753e-53 | -8.615850e-47 |
| Msa0165830 | Msa0388620 | 0.834974 | 2.196927e-56 | -8.615850e-47 |
| Msa0168380 | Msa0388620 | 0.873506 | 1.394853e-67 | -8.615850e-47 |
| Msa0170070 | Msa0388620 | 0.838257 | 3.202483e-57 | -8.615850e-47 |
| Msa0184700 | Msa0388620 | 0.862926 | 3.584058e-64 | -8.615850e-47 |
| Msa0186180 | Msa0388620 | 0.835090 | 2.053799e-56 | -8.615850e-47 |
| Msa0204970 | Msa0388620 | 0.883125 | 5.846625e-71 | -8.615850e-47 |
| Msa0225800 | Msa0388620 | 0.837537 | 4.903987e-57 | -8.615850e-47 |
| Msa0364680 | Msa0388620 | 0.808015 | 3.811790e-50 | -8.615850e-47 |
| Msa0373170 | Msa0388620 | 0.876413 | 1.424040e-68 | -8.615850e-47 |
| Msa0373590 | Msa0388620 | 0.803176 | 3.950384e-49 | -8.615850e-47 |
| Msa0382230 | Msa0388620 | 0.844014 | 9.824674e-59 | -8.615850e-47 |
| Msa0383940 | Msa0388620 | 0.804340 | 2.263785e-49 | -8.615850e-47 |
| Msa0388250 | Msa0388620 | 0.834780 | 2.459255e-56 | -8.615850e-47 |
| Msa0388620 | Msa0412130 | 0.817399 | 3.364523e-52 | -8.615850e-47 |
| Msa0388620 | Msa0415820 | 0.812786 | 3.558675e-51 | -8.615850e-47 |
| Msa0388620 | Msa0416210 | 0.846795 | 1.735315e-59 | -8.615850e-47 |
| Msa0388620 | Msa0420430 | 0.817458 | 3.264370e-52 | -8.615850e-47 |
| Msa0388620 | Msa0420670 | 0.807727 | 4.389591e-50 | -8.615850e-47 |
| Msa0388620 | Msa0421750 | 0.864054 | 1.602598e-64 | -8.615850e-47 |
| Msa0388620 | Msa0422690 | 0.810034 | 1.408465e-50 | -8.615850e-47 |
| Msa0388620 | Msa0429970 | 0.848835 | 4.757397e-60 | -8.615850e-47 |
| Msa0388620 | Msa0433630 | 0.859149 | 5.048768e-63 | -8.615850e-47 |
| Msa0388620 | Msa0433760 | 0.810404 | 1.172186e-50 | -8.615850e-47 |
| Msa0388620 | Msa0434360 | 0.811317 | 7.438141e-51 | -8.615850e-47 |
| Msa0388620 | Msa0436100 | 0.805855 | 1.091213e-49 | -8.615850e-47 |
| Msa0388620 | Msa0456670 | 0.811649 | 6.297905e-51 | -8.615850e-47 |
| Msa0388620 | Msa0458100 | 0.844598 | 6.845329e-59 | -8.615850e-47 |
| Msa0388620 | Msa0461550 | 0.828765 | 7.494363e-55 | -8.615850e-47 |
| Msa0388620 | Msa0466520 | 0.827361 | 1.632344e-54 | -8.615850e-47 |
| Msa0388620 | Msa0467690 | 0.873545 | 1.353010e-67 | -8.615850e-47 |
| Msa0388620 | Msa0468390 | 0.830649 | 2.606967e-55 | -8.615850e-47 |
| Msa0388620 | Msa0468620 | 0.811617 | 6.399761e-51 | -8.615850e-47 |
| Msa0388620 | Msa0477480 | 0.800144 | 1.653889e-48 | -8.615850e-47 |
| Msa0388620 | Msa0477630 | 0.820446 | 6.829942e-53 | -8.615850e-47 |
| Msa0388620 | Msa0478140 | 0.810453 | 1.143930e-50 | -8.615850e-47 |
| Msa0388620 | Msa0478200 | 0.811466 | 6.904222e-51 | -8.615850e-47 |
| Msa0388620 | Msa0480730 | 0.801870 | 7.343472e-49 | -8.615850e-47 |
| Msa0388620 | Msa0506540 | 0.825696 | 4.071638e-54 | -8.615850e-47 |
| Msa0388620 | Msa0506880 | 0.823784 | 1.149259e-53 | -8.615850e-47 |
| Msa0388620 | Msa0507810 | 0.841185 | 5.539360e-58 | -8.615850e-47 |
| Msa0388620 | Msa0507820 | 0.835427 | 1.689256e-56 | -8.615850e-47 |
| Msa0388620 | Msa0507920 | 0.837480 | 5.069547e-57 | -8.615850e-47 |
| Msa0388620 | Msa0512530 | 0.807894 | 4.044463e-50 | -8.615850e-47 |
| Msa0388620 | Msa0513640 | 0.813588 | 2.372887e-51 | -8.615850e-47 |
| Msa0388620 | Msa0514020 | 0.870042 | 1.966669e-66 | -8.615850e-47 |
| Msa0388620 | Msa0514500 | 0.812977 | 3.231873e-51 | -8.615850e-47 |
| Msa0388620 | Msa0518410 | 0.830176 | 3.403844e-55 | -8.615850e-47 |
| Msa0388620 | Msa0520680 | 0.835714 | 1.428658e-56 | -8.615850e-47 |
| Msa0388620 | Msa0521510 | 0.850677 | 1.454822e-60 | -8.615850e-47 |
| Msa0388620 | Msa0521530 | 0.838779 | 2.347754e-57 | -8.615850e-47 |
| Msa0388620 | Msa0521680 | 0.801452 | 8.944109e-49 | -8.615850e-47 |
| Msa0388620 | Msa0527850 | 0.869223 | 3.635644e-66 | -8.615850e-47 |
| Msa0388620 | Msa0541740 | 0.843379 | 1.453367e-58 | -8.615850e-47 |
| Msa0388620 | Msa0544410 | 0.872885 | 2.253850e-67 | -8.615850e-47 |
| Msa0388620 | Msa0544430 | 0.863333 | 2.682336e-64 | -8.615850e-47 |
| Msa0388620 | Msa0553750 | 0.804674 | 1.928363e-49 | -8.615850e-47 |
| Msa0388620 | Msa0554300 | 0.828270 | 9.868982e-55 | -8.615850e-47 |
| Msa0388620 | Msa0561560 | 0.806836 | 6.778098e-50 | -8.615850e-47 |
| Msa0388620 | Msa0563900 | 0.804212 | 2.407816e-49 | -8.615850e-47 |
| Msa0388620 | Msa0568710 | 0.812930 | 3.308711e-51 | -8.615850e-47 |
| Msa0388620 | Msa0572830 | 0.878427 | 2.832885e-69 | -8.615850e-47 |
| Msa0388620 | Msa0574660 | 0.801131 | 1.040464e-48 | -8.615850e-47 |
| Msa0388620 | Msa0576330 | 0.822581 | 2.193961e-53 | -8.615850e-47 |
| Msa0388620 | Msa0582460 | 0.883063 | 6.157041e-71 | -8.615850e-47 |
| Msa0388620 | Msa0584530 | 0.822464 | 2.335697e-53 | -8.615850e-47 |
| Msa0388620 | Msa0586200 | 0.859133 | 5.106834e-63 | -8.615850e-47 |
| Msa0388620 | Msa0605520 | 0.825775 | 3.900875e-54 | -8.615850e-47 |
| Msa0388620 | Msa0607330 | 0.826824 | 2.194324e-54 | -8.615850e-47 |
| Msa0388620 | Msa0607800 | 0.802377 | 5.775443e-49 | -8.615850e-47 |
| Msa0388620 | Msa0608350 | 0.805127 | 1.550852e-49 | -8.615850e-47 |
| Msa0388620 | Msa0613630 | 0.800786 | 1.224177e-48 | -8.615850e-47 |
| Msa0388620 | Msa0618840 | 0.862641 | 4.390168e-64 | -8.615850e-47 |
| Msa0388620 | Msa0618990 | 0.867870 | 9.950116e-66 | -8.615850e-47 |
| Msa0388620 | Msa0620500 | 0.834820 | 2.402626e-56 | -8.615850e-47 |
| Msa0388620 | Msa0620510 | 0.808151 | 3.565699e-50 | -8.615850e-47 |
| Msa0388620 | Msa0623310 | 0.808854 | 2.524119e-50 | -8.615850e-47 |
| Msa0388620 | Msa0625620 | 0.858963 | 5.740091e-63 | -8.615850e-47 |
| Msa0388620 | Msa0630440 | 0.816492 | 5.378258e-52 | -8.615850e-47 |
| Msa0388620 | Msa0640800 | 0.861512 | 9.737014e-64 | -8.615850e-47 |
| Msa0388620 | Msa0642550 | 0.801385 | 9.232946e-49 | -8.615850e-47 |
| Msa0388620 | Msa0647440 | 0.862581 | 4.578872e-64 | -8.615850e-47 |
| Msa0388620 | Msa0648040 | 0.821098 | 4.836713e-53 | -8.615850e-47 |
| Msa0388620 | Msa0648760 | 0.842189 | 3.010599e-58 | -8.615850e-47 |
| Msa0388620 | Msa0653160 | 0.814463 | 1.521055e-51 | -8.615850e-47 |
| Msa0388620 | Msa0654740 | 0.809544 | 1.795992e-50 | -8.615850e-47 |
| Msa0388620 | Msa0657210 | 0.839566 | 1.467892e-57 | -8.615850e-47 |
| Msa0388620 | Msa0659200 | 0.853222 | 2.755794e-61 | -8.615850e-47 |
| Msa0388620 | Msa0663290 | 0.862461 | 4.987061e-64 | -8.615850e-47 |
| Msa0388620 | Msa0664070 | 0.877278 | 7.144842e-69 | -8.615850e-47 |
| Msa0388620 | Msa0684750 | 0.828695 | 7.794071e-55 | -8.615850e-47 |
| Msa0388620 | Msa0688380 | 0.838118 | 3.476760e-57 | -8.615850e-47 |
| Msa0388620 | Msa0688620 | 0.839646 | 1.399336e-57 | -8.615850e-47 |
| Msa0388620 | Msa0689830 | 0.823990 | 1.028779e-53 | -8.615850e-47 |
| Msa0388620 | Msa0690320 | 0.847780 | 9.311185e-60 | -8.615850e-47 |
| Msa0388620 | Msa0690570 | 0.809517 | 1.819960e-50 | -8.615850e-47 |
| Msa0388620 | Msa0690740 | 0.831791 | 1.366088e-55 | -8.615850e-47 |
| Msa0388620 | Msa0691270 | 0.811476 | 6.868952e-51 | -8.615850e-47 |
| Msa0388620 | Msa0695560 | 0.801895 | 7.255235e-49 | -8.615850e-47 |
| Msa0388620 | Msa0701250 | 0.842225 | 2.944114e-58 | -8.615850e-47 |
| Msa0388620 | Msa0705140 | 0.813733 | 2.204460e-51 | -8.615850e-47 |
| Msa0388620 | Msa0705180 | 0.861894 | 7.442862e-64 | -8.615850e-47 |
| Msa0388620 | Msa0707260 | 0.871296 | 7.611640e-67 | -8.615850e-47 |
| Msa0388620 | Msa0708980 | 0.877158 | 7.864359e-69 | -8.615850e-47 |
| Msa0388620 | Msa0713080 | 0.800584 | 1.345847e-48 | -8.615850e-47 |
| Msa0388620 | Msa0717900 | 0.862964 | 3.490372e-64 | -8.615850e-47 |
| Msa0388620 | Msa0720280 | 0.863494 | 2.392507e-64 | -8.615850e-47 |
| Msa0388620 | Msa0737020 | 0.823668 | 1.223503e-53 | -8.615850e-47 |
| Msa0388620 | Msa0749190 | 0.836563 | 8.695357e-57 | -8.615850e-47 |
| Msa0388620 | Msa0750520 | 0.844851 | 5.853537e-59 | -8.615850e-47 |
| Msa0388620 | Msa0751720 | 0.811928 | 5.477187e-51 | -8.615850e-47 |
| Msa0388620 | Msa0761830 | 0.803974 | 2.698799e-49 | -8.615850e-47 |
| Msa0388620 | Msa0771910 | 0.815926 | 7.198239e-52 | -8.615850e-47 |
| Msa0388620 | Msa0778600 | 0.801479 | 8.829536e-49 | -8.615850e-47 |
| Msa0388620 | Msa0803140 | 0.873244 | 1.708960e-67 | -8.615850e-47 |
| Msa0388620 | Msa0804170 | 0.808910 | 2.455108e-50 | -8.615850e-47 |
| Msa0388620 | Msa0816080 | 0.845640 | 3.580409e-59 | -8.615850e-47 |
| Msa0388620 | Msa0816230 | 0.808226 | 3.436428e-50 | -8.615850e-47 |
| Msa0388620 | Msa0831820 | 0.851326 | 9.545897e-61 | -8.615850e-47 |
| Msa0388620 | Msa0837680 | 0.872910 | 2.211324e-67 | -8.615850e-47 |
| Msa0388620 | Msa0841500 | 0.869557 | 2.832678e-66 | -8.615850e-47 |
| Msa0388620 | Msa0846900 | 0.855566 | 5.791047e-62 | -8.615850e-47 |
| Msa0388620 | Msa0856610 | 0.820765 | 5.771192e-53 | -8.615850e-47 |
| Msa0388620 | Msa0861440 | 0.847296 | 1.264743e-59 | -8.615850e-47 |
| Msa0388620 | Msa0866530 | 0.809909 | 1.498984e-50 | -8.615850e-47 |
| Msa0388620 | Msa0874730 | 0.813938 | 1.986265e-51 | -8.615850e-47 |
| Msa0388620 | Msa0876630 | 0.829257 | 5.694343e-55 | -8.615850e-47 |
| Msa0388620 | Msa0879920 | 0.834116 | 3.610448e-56 | -8.615850e-47 |
| Msa0388620 | Msa0880280 | 0.800817 | 1.206181e-48 | -8.615850e-47 |
| Msa0388620 | Msa0897790 | 0.802404 | 5.702558e-49 | -8.615850e-47 |
| Msa0388620 | Msa0900090 | 0.875396 | 3.183836e-68 | -8.615850e-47 |
| Msa0388620 | Msa0926310 | 0.842549 | 2.415581e-58 | -8.615850e-47 |
| Msa0388620 | Msa0926760 | 0.813464 | 2.525562e-51 | -8.615850e-47 |
| Msa0388620 | Msa0930040 | 0.817660 | 2.938942e-52 | -8.615850e-47 |
| Msa0388620 | Msa0931310 | 0.819965 | 8.803582e-53 | -8.615850e-47 |
| Msa0388620 | Msa0945900 | 0.823068 | 1.689892e-53 | -8.615850e-47 |
| Msa0388620 | Msa0965470 | 0.839904 | 1.198669e-57 | -8.615850e-47 |
| Msa0388620 | Msa0976380 | 0.829194 | 5.900901e-55 | -8.615850e-47 |
| Msa0388620 | Msa0978980 | 0.844880 | 5.746361e-59 | -8.615850e-47 |
| Msa0388620 | Msa0982960 | 0.855170 | 7.548978e-62 | -8.615850e-47 |
| Msa0388620 | Msa0999950 | 0.823587 | 1.278009e-53 | -8.615850e-47 |
| Msa0388620 | Msa1000780 | 0.848686 | 5.233124e-60 | -8.615850e-47 |
| Msa0388620 | Msa1008670 | 0.809413 | 1.915265e-50 | -8.615850e-47 |
| Msa0388620 | Msa1008680 | 0.817342 | 3.466743e-52 | -8.615850e-47 |
| Msa0388620 | Msa1008850 | 0.820209 | 7.738446e-53 | -8.615850e-47 |
| Msa0388620 | Msa1021560 | 0.835472 | 1.645529e-56 | -8.615850e-47 |
| Msa0388620 | Msa1041370 | 0.997347 | 5.941003e-241 | -8.615850e-47 |
| Msa0388620 | Msa1050260 | 0.816716 | 4.790094e-52 | -8.615850e-47 |
| Msa0388620 | Msa1060900 | 0.810941 | 8.971738e-51 | -8.615850e-47 |
| Msa0388620 | Msa1071410 | 0.843412 | 1.423749e-58 | -8.615850e-47 |
| Msa0388620 | Msa1076020 | 0.806800 | 6.899280e-50 | -8.615850e-47 |
| Msa0388620 | Msa1078860 | 0.866429 | 2.870066e-65 | -8.615850e-47 |
| Msa0388620 | Msa1078990 | 0.841215 | 5.439707e-58 | -8.615850e-47 |
| Msa0388620 | Msa1081270 | 0.977868 | 1.195904e-144 | -8.615850e-47 |
| Msa0388620 | Msa1083630 | 0.813724 | 2.213848e-51 | -8.615850e-47 |
| Msa0388620 | Msa1085680 | 0.823028 | 1.726552e-53 | -8.615850e-47 |
| Msa0388620 | Msa1105540 | 0.833556 | 4.982778e-56 | -8.615850e-47 |
| Msa0388620 | Msa1105580 | 0.824148 | 9.441605e-54 | -8.615850e-47 |
| Msa0388620 | Msa1106220 | 0.851308 | 9.659758e-61 | -8.615850e-47 |
| Msa0388620 | Msa1124210 | 0.804482 | 2.114784e-49 | -8.615850e-47 |
| Msa0388620 | Msa1127280 | 0.800920 | 1.149152e-48 | -8.615850e-47 |
| Msa0388620 | Msa1128620 | 0.821020 | 5.040546e-53 | -8.615850e-47 |
| Msa0388620 | Msa1138800 | 0.805119 | 1.557200e-49 | -8.615850e-47 |
| Msa0388620 | Msa1144990 | 0.845331 | 4.340656e-59 | -8.615850e-47 |
| Msa0388620 | Msa1147560 | 0.805431 | 1.339361e-49 | -8.615850e-47 |
| Msa0388620 | Msa1148630 | 0.812560 | 3.986657e-51 | -8.615850e-47 |
| Msa0388620 | Msa1148930 | 0.836006 | 1.205070e-56 | -8.615850e-47 |
| Msa0388620 | Msa1159590 | 0.808179 | 3.516269e-50 | -8.615850e-47 |
| Msa0388620 | Msa1162360 | 0.839930 | 1.180153e-57 | -8.615850e-47 |
| Msa0388620 | Msa1163180 | 0.831883 | 1.296811e-55 | -8.615850e-47 |
| Msa0388620 | Msa1165480 | 0.806209 | 9.190697e-50 | -8.615850e-47 |
| Msa0388620 | Msa1169170 | 0.838889 | 2.198754e-57 | -8.615850e-47 |
| Msa0388620 | Msa1169690 | 0.857621 | 1.441112e-62 | -8.615850e-47 |
| Msa0388620 | Msa1183910 | 0.806256 | 8.987288e-50 | -8.615850e-47 |
| Msa0388620 | Msa1188340 | 0.801958 | 7.041921e-49 | -8.615850e-47 |
| Msa0388620 | Msa1191000 | 0.849018 | 4.231503e-60 | -8.615850e-47 |
| Msa0388620 | Msa1201780 | 0.809954 | 1.465532e-50 | -8.615850e-47 |
| Msa0388620 | Msa1206040 | 0.854484 | 1.194106e-61 | -8.615850e-47 |
| Msa0388620 | Msa1215980 | 0.835189 | 1.939056e-56 | -8.615850e-47 |
| Msa0388620 | Msa1215990 | 0.806526 | 7.880292e-50 | -8.615850e-47 |
| Msa0388620 | Msa1217890 | 0.803435 | 3.490188e-49 | -8.615850e-47 |
| Msa0388620 | Msa1219640 | 0.810039 | 1.405265e-50 | -8.615850e-47 |
| Msa0388620 | Msa1226370 | 0.842630 | 2.300296e-58 | -8.615850e-47 |
| Msa0388620 | Msa1240940 | 0.818175 | 2.248393e-52 | -8.615850e-47 |
| Msa0388620 | Msa1244690 | 0.839010 | 2.046260e-57 | -8.615850e-47 |
| Msa0388620 | Msa1254420 | 0.833778 | 4.385936e-56 | -8.615850e-47 |
| Msa0388620 | Msa1254540 | 0.810232 | 1.276712e-50 | -8.615850e-47 |
| Msa0388620 | Msa1266690 | 0.827422 | 1.578059e-54 | -8.615850e-47 |
| Msa0388620 | Msa1267150 | 0.803168 | 3.965698e-49 | -8.615850e-47 |
| Msa0388620 | Msa1267930 | 0.841485 | 4.617769e-58 | -8.615850e-47 |
| Msa0388620 | Msa1282300 | 0.831593 | 1.528688e-55 | -8.615850e-47 |
| Msa0388620 | Msa1294280 | 0.835781 | 1.374189e-56 | -8.615850e-47 |
| Msa0388620 | Msa1294460 | 0.830897 | 2.266407e-55 | -8.615850e-47 |
| Msa0388620 | Msa1294790 | 0.859469 | 4.048886e-63 | -8.615850e-47 |
| Msa0388620 | Msa1297070 | 0.851748 | 7.250104e-61 | -8.615850e-47 |
| Msa0388620 | Msa1301820 | 0.844348 | 7.994436e-59 | -8.615850e-47 |
| Msa0388620 | Msa1301830 | 0.847497 | 1.114016e-59 | -8.615850e-47 |
| Msa0388620 | Msa1305780 | 0.817633 | 2.980136e-52 | -8.615850e-47 |
| Msa0388620 | Msa1305920 | 0.807548 | 4.790998e-50 | -8.615850e-47 |
| Msa0388620 | Msa1315500 | 0.814637 | 1.391807e-51 | -8.615850e-47 |
| Msa0388620 | Msa1328870 | 0.846273 | 2.408903e-59 | -8.615850e-47 |
| Msa0388620 | Msa1332950 | 0.813908 | 2.016897e-51 | -8.615850e-47 |
| Msa0388620 | Msa1333360 | 0.830314 | 3.148404e-55 | -8.615850e-47 |
| Msa0388620 | Msa1333650 | 0.805265 | 1.450839e-49 | -8.615850e-47 |
| Msa0388620 | Msa1339170 | 0.802800 | 4.723152e-49 | -8.615850e-47 |
| Msa0388620 | Msa1339230 | 0.837802 | 4.192527e-57 | -8.615850e-47 |
| Msa0388620 | Msa1361680 | 0.806516 | 7.920116e-50 | -8.615850e-47 |
| Msa0388620 | Msa1365500 | 0.817514 | 3.170862e-52 | -8.615850e-47 |
| Msa0388620 | Msa1371800 | 0.818201 | 2.218507e-52 | -8.615850e-47 |
| Msa0388620 | Msa1372030 | 0.865302 | 6.516804e-65 | -8.615850e-47 |
| Msa0388620 | Msa1376310 | 0.815850 | 7.484770e-52 | -8.615850e-47 |
| Msa0388620 | Msa1381330 | 0.811698 | 6.146316e-51 | -8.615850e-47 |
| Msa0388620 | Msa1381800 | 0.837524 | 4.939307e-57 | -8.615850e-47 |
| Msa0388620 | Msa1382830 | 0.830031 | 3.692112e-55 | -8.615850e-47 |
| Msa0388620 | Msa1387500 | 0.817176 | 3.777850e-52 | -8.615850e-47 |
| Msa0388620 | Msa1389820 | 0.828388 | 9.241227e-55 | -8.615850e-47 |
| Msa0388620 | Msa1390210 | 0.818365 | 2.035712e-52 | -8.615850e-47 |
| Msa0388620 | Msa1393560 | 0.867776 | 1.066302e-65 | -8.615850e-47 |
| Msa0388620 | Msa1399190 | 0.831585 | 1.535447e-55 | -8.615850e-47 |
| Msa0388620 | Msa1406720 | 0.815629 | 8.384098e-52 | -8.615850e-47 |
| Msa0388620 | Msa1410190 | 0.803756 | 2.995356e-49 | -8.615850e-47 |
| Msa0388620 | Msa1413020 | 0.805992 | 1.021028e-49 | -8.615850e-47 |
| Msa0388620 | Msa1424370 | 0.837129 | 6.236580e-57 | -8.615850e-47 |
| Msa0388620 | Msa1426320 | 0.859820 | 3.174127e-63 | -8.615850e-47 |
| Msa0388620 | Msa1428690 | 0.814512 | 1.483989e-51 | -8.615850e-47 |
| Msa0388620 | Msa1431520 | 0.822219 | 2.662337e-53 | -8.615850e-47 |
| Msa0388620 | Msa1432520 | 0.816411 | 5.607681e-52 | -8.615850e-47 |
| Msa0388620 | Msa1434640 | 0.820369 | 7.111921e-53 | -8.615850e-47 |
| Msa0388620 | Msa1435100 | 0.832521 | 9.016050e-56 | -8.615850e-47 |
| Msa0388620 | Msa1439730 | 0.833567 | 4.952420e-56 | -8.615850e-47 |
| Msa0388620 | Msa1442260 | 0.810760 | 9.819307e-51 | -8.615850e-47 |
| Msa0388620 | Msa1444930 | 0.815925 | 7.200456e-52 | -8.615850e-47 |
| Msa0388620 | Msa1457840 | 0.833934 | 4.009132e-56 | -8.615850e-47 |
| Msa0388620 | Msa1461260 | 0.802345 | 5.863657e-49 | -8.615850e-47 |
| Msa0249870 | Msa0388620 | 0.866945 | 1.966369e-65 | -8.615850e-47 |
| Msa0260570 | Msa0388620 | 0.842605 | 2.335324e-58 | -8.615850e-47 |
| Msa0260630 | Msa0388620 | 0.845399 | 4.161243e-59 | -8.615850e-47 |
| Msa0265310 | Msa0388620 | 0.830928 | 2.227881e-55 | -8.615850e-47 |
| Msa0276800 | Msa0388620 | -0.814532 | 1.468788e-51 | -8.615850e-47 |
| Msa0281540 | Msa0388620 | 0.845175 | 4.783083e-59 | -8.615850e-47 |
| Msa0288400 | Msa0388620 | 0.850685 | 1.447130e-60 | -8.615850e-47 |
| Msa0316720 | Msa0388620 | -0.812875 | 3.401226e-51 | -8.615850e-47 |
| Msa0320580 | Msa0388620 | 0.835473 | 1.644601e-56 | -8.615850e-47 |
| Msa0336430 | Msa0388620 | 0.801547 | 8.554397e-49 | -8.615850e-47 |
| Msa0336520 | Msa0388620 | 0.808477 | 3.038410e-50 | -8.615850e-47 |
| Msa0342220 | Msa0388620 | 0.861963 | 7.089074e-64 | -8.615850e-47 |
| Msa0344110 | Msa0388620 | 0.839435 | 1.587763e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388620 | MtrunA17_Chr7g0268191 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388620 | AT5G06590.1 | 46.372 | 317 | 131 | 8 | 7 | 292 | 5 | 313 | 3.29e-82 | 251 |
| Msa0388620 | AT5G06590.2 | 45.139 | 288 | 119 | 8 | 7 | 263 | 5 | 284 | 8.48e-67 | 211 |
Find 74 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAATGTTGAATGATTT+TGG | 0.158419 | 3_1:-93068898 | Msa0388620:three_prime_UTR |
| TCATCTTCCTCCTCAATTTC+AGG | 0.165758 | 3_1:+93071135 | None:intergenic |
| ATAATATTTATCTTGTTATT+TGG | 0.181203 | 3_1:-93068788 | Msa0388620:three_prime_UTR |
| AGAGGGAGACAAGGGGAATT+TGG | 0.217034 | 3_1:-93070114 | Msa0388620:CDS |
| GATAGTCCCTCTTCTTTCTA+TGG | 0.224713 | 3_1:-93071069 | Msa0388620:CDS |
| GATATTTCTTCATTTGATTT+AGG | 0.238863 | 3_1:-93069400 | Msa0388620:intron |
| AAAATATGATCCATTCCTTT+TGG | 0.259534 | 3_1:-93068869 | Msa0388620:three_prime_UTR |
| CCCTTGTCTCCCTCTAAATT+AGG | 0.260676 | 3_1:+93070122 | None:intergenic |
| TTACAAGCAGAAAGAATAAT+TGG | 0.276504 | 3_1:+93068821 | None:intergenic |
| GCAGGTTTCGGATGATAAAT+TGG | 0.276771 | 3_1:-93071091 | Msa0388620:CDS |
| AGCAAATATGATCTTGCTTT+AGG | 0.302372 | 3_1:+93069082 | None:intergenic |
| TCGTTGCAGAAGCTTGAAAT+TGG | 0.308277 | 3_1:+93071633 | None:intergenic |
| TCACTCTCAATGGCCGATTC+TGG | 0.318237 | 3_1:-93071045 | Msa0388620:CDS |
| GCTTCTTCAGATTGGGAATT+GGG | 0.324453 | 3_1:+93071680 | None:intergenic |
| TTTATCTTGTTATTTGGTAT+TGG | 0.329694 | 3_1:-93068782 | Msa0388620:three_prime_UTR |
| AGCTGCTATGGCTACGTTCC+AGG | 0.330522 | 3_1:-93071257 | Msa0388620:intron |
| TTCAAGCTTCTGCAACGAAT+TGG | 0.333099 | 3_1:-93071628 | Msa0388620:CDS |
| TGCTTCTTCAGATTGGGAAT+TGG | 0.343798 | 3_1:+93071679 | None:intergenic |
| GTTGAATTGCTTCTTCAGAT+TGG | 0.365742 | 3_1:+93071672 | None:intergenic |
| TGTACAAGCGCCGCAGGTTT+CGG | 0.382807 | 3_1:-93071103 | Msa0388620:CDS |
| TTGAATTGCTTCTTCAGATT+GGG | 0.391394 | 3_1:+93071673 | None:intergenic |
| CTTTGAGTTTGAAACAGCTT+GGG | 0.420767 | 3_1:-93070597 | Msa0388620:CDS |
| GAACAGAGTACCTAATTTAG+AGG | 0.420798 | 3_1:-93070132 | Msa0388620:intron |
| GAGAGAGTACTGAGAGGAAC+AGG | 0.426975 | 3_1:+93071543 | None:intergenic |
| GGGAATTGGGTTGAACTTTG+CGG | 0.441806 | 3_1:+93071693 | None:intergenic |
| GCTCTTTAATATCTTTAAAG+TGG | 0.442865 | 3_1:+93070070 | None:intergenic |
| TTCCATCGGTCTTCTTGCTT+AGG | 0.444534 | 3_1:+93069443 | None:intergenic |
| ATGAAGAAATATCATCTTGA+CGG | 0.455986 | 3_1:+93069410 | None:intergenic |
| AGGAACAGGTCTGCGATGAA+TGG | 0.463072 | 3_1:+93071557 | None:intergenic |
| GATGAAACTAAACTTAGTCT+TGG | 0.474255 | 3_1:+93068922 | None:intergenic |
| TGATTTAGTTCCTGAAATTG+AGG | 0.477536 | 3_1:-93071145 | Msa0388620:intron |
| TCTTTGAGTTTGAAACAGCT+TGG | 0.478455 | 3_1:-93070598 | Msa0388620:CDS |
| AAGTTGAAACGCGGCGGTTG+AGG | 0.482382 | 3_1:+93071408 | None:intergenic |
| GAACTTCTTGAAGCCAGAAT+CGG | 0.483419 | 3_1:+93071032 | None:intergenic |
| TAATATCTTTAAAGTGGAGC+TGG | 0.492002 | 3_1:+93070076 | None:intergenic |
| CTCTTCAAAGGAAACCGTGC+TGG | 0.493028 | 3_1:+93071352 | None:intergenic |
| TGAATCGAGCAGTTCGAGAT+CGG | 0.501516 | 3_1:+93071379 | None:intergenic |
| TGATGCTAGAGCCTTCATAT+AGG | 0.502322 | 3_1:+93070028 | None:intergenic |
| ATGGTCGTTGAGACAGTTGA+TGG | 0.503531 | 3_1:-93069037 | Msa0388620:CDS |
| TTGGGTTGAACTTTGCGGCT+CGG | 0.504939 | 3_1:+93071698 | None:intergenic |
| AATTACTGAACCTCCCCAAA+AGG | 0.511380 | 3_1:+93068854 | None:intergenic |
| TTGAACAAGAGCGTCGGAAG+AGG | 0.513169 | 3_1:+93071581 | None:intergenic |
| CTGAACCTCCCCAAAAGGAA+TGG | 0.514078 | 3_1:+93068859 | None:intergenic |
| GCTAGAGCCTTCATATAGGC+AGG | 0.529395 | 3_1:+93070032 | None:intergenic |
| TCTAGTGCGCATGAACCGTA+TGG | 0.538349 | 3_1:-93069056 | Msa0388620:CDS |
| TTATGATGTACAAGCGCCGC+AGG | 0.539382 | 3_1:-93071109 | Msa0388620:CDS |
| TCTTGTACAATTCGTTGCAG+TGG | 0.542890 | 3_1:+93071321 | None:intergenic |
| CTAGCTACTTTAGCATCTGA+AGG | 0.547806 | 3_1:-93070559 | Msa0388620:intron |
| ATGTCTTCCTGCCTATATGA+AGG | 0.553974 | 3_1:-93070039 | Msa0388620:CDS |
| GATCGTCTTAAAAGCTGCTA+TGG | 0.555122 | 3_1:-93071269 | Msa0388620:CDS |
| TTTCTATGGATCACTCTCAA+TGG | 0.556386 | 3_1:-93071055 | Msa0388620:CDS |
| TATGAAGGCTCTAGCATCAT+GGG | 0.556428 | 3_1:-93070024 | Msa0388620:CDS |
| ATATGAAGGCTCTAGCATCA+TGG | 0.557022 | 3_1:-93070025 | Msa0388620:CDS |
| ACGGAAGAAGTTGCTTCCAT+CGG | 0.562648 | 3_1:+93069429 | None:intergenic |
| ATTCTTTCTGCTTGTAACTG+TGG | 0.571245 | 3_1:-93068815 | Msa0388620:three_prime_UTR |
| CAACTGTCTCAACGACCATA+CGG | 0.576988 | 3_1:+93069041 | None:intergenic |
| GTGGCCTAAAAGCTCTTCAA+AGG | 0.578631 | 3_1:+93071340 | None:intergenic |
| AGCCTAAGCAAGAAGACCGA+TGG | 0.582747 | 3_1:-93069445 | Msa0388620:CDS |
| AGTGATCCATAGAAAGAAGA+GGG | 0.586786 | 3_1:+93071063 | None:intergenic |
| CCTAATTTAGAGGGAGACAA+GGG | 0.590428 | 3_1:-93070122 | Msa0388620:CDS |
| ATCTTCGAGTTCGATTAGAT+CGG | 0.595046 | 3_1:+93071289 | None:intergenic |
| ACCTAATTTAGAGGGAGACA+AGG | 0.595373 | 3_1:-93070123 | Msa0388620:CDS |
| AACAGAGTACCTAATTTAGA+GGG | 0.598785 | 3_1:-93070131 | Msa0388620:intron |
| GAGTGATCCATAGAAAGAAG+AGG | 0.611635 | 3_1:+93071062 | None:intergenic |
| AATGGATTGAACAAGAGCGT+CGG | 0.632071 | 3_1:+93071575 | None:intergenic |
| GGCCTTCTAGGATCTACTCG+TGG | 0.641817 | 3_1:-93069488 | Msa0388620:intron |
| TTTAGTTCCTGAAATTGAGG+AGG | 0.651521 | 3_1:-93071142 | Msa0388620:intron |
| GCTCGATTCAATGTCCAGCA+CGG | 0.657391 | 3_1:-93071366 | Msa0388620:CDS |
| GCGGTTGAGGCATTGTACGA+AGG | 0.677592 | 3_1:+93071421 | None:intergenic |
| CACTTGAAGTTGAAACGCGG+CGG | 0.678154 | 3_1:+93071402 | None:intergenic |
| AATTTATCATCCGAAACCTG+CGG | 0.707837 | 3_1:+93071093 | None:intergenic |
| CTAATTTAGAGGGAGACAAG+GGG | 0.710745 | 3_1:-93070121 | Msa0388620:CDS |
| GAAGGCTCTAGCATCATGGG+AGG | 0.711259 | 3_1:-93070021 | Msa0388620:intron |
| CGGCACTTGAAGTTGAAACG+CGG | 0.714890 | 3_1:+93071399 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATATGGATTTTTA+GGG | + | chr3_1:93070791-93070810 | None:intergenic | 10.0% |
| !!! | AATTTTTTATATGGATTTTT+AGG | + | chr3_1:93070792-93070811 | None:intergenic | 10.0% |
| !!! | ATAACTTACAATTTTTTATA+TGG | + | chr3_1:93070801-93070820 | None:intergenic | 10.0% |
| !!! | ATAATATTTATCTTGTTATT+TGG | - | chr3_1:93071691-93071710 | Msa0388620:five_prime_UTR | 10.0% |
| !! | TGAAAAAGTCTTTAAATTTA+AGG | + | chr3_1:93069491-93069510 | None:intergenic | 15.0% |
| !!! | TCATTTTTTCAAATTATAGT+TGG | + | chr3_1:93069710-93069729 | None:intergenic | 15.0% |
| !! | AATTGTAAGTTATATGTAAA+AGG | - | chr3_1:93070808-93070827 | Msa0388620:intron | 15.0% |
| !! | ACACTAAAAACTAAACTTAA+CGG | + | chr3_1:93069268-93069287 | None:intergenic | 20.0% |
| !!! | TTAAAGACTTTTTCATACTT+TGG | - | chr3_1:93069496-93069515 | Msa0388620:intron | 20.0% |
| !! | TTGCAAATAAAAATCACATA+CGG | - | chr3_1:93069611-93069630 | Msa0388620:intron | 20.0% |
| !!! | ATCAATTCTAAAGAGAATAA+AGG | + | chr3_1:93069858-93069877 | None:intergenic | 20.0% |
| !!! | TTTTGTTTACTAGTTTTTGT+GGG | - | chr3_1:93070095-93070114 | Msa0388620:CDS | 20.0% |
| !! | ATTATGTGTTTATATACCAA+AGG | - | chr3_1:93070504-93070523 | Msa0388620:intron | 20.0% |
| !! | TTATGTGTTTATATACCAAA+GGG | - | chr3_1:93070505-93070524 | Msa0388620:intron | 20.0% |
| !!! | GATATTTCTTCATTTGATTT+AGG | - | chr3_1:93071079-93071098 | Msa0388620:CDS | 20.0% |
| !! | TTATTAAACTATGCTAAAGA+GGG | + | chr3_1:93071200-93071219 | None:intergenic | 20.0% |
| !! | ATTATTAAACTATGCTAAAG+AGG | + | chr3_1:93071201-93071220 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAATTGCTTCTG+TGG | + | chr3_1:93071295-93071314 | None:intergenic | 20.0% |
| !! | ACGTAAGTTACAAAAAAAAA+GGG | + | chr3_1:93071536-93071555 | None:intergenic | 20.0% |
| !! | AACGTAAGTTACAAAAAAAA+AGG | + | chr3_1:93071537-93071556 | None:intergenic | 20.0% |
| !!! | ATTGAAATGTTGAATGATTT+TGG | - | chr3_1:93071581-93071600 | Msa0388620:CDS | 20.0% |
| !!! | TTTATCTTGTTATTTGGTAT+TGG | - | chr3_1:93071697-93071716 | Msa0388620:five_prime_UTR | 20.0% |
| !! | AAGATTTTATCAGACACAAA+GGG | + | chr3_1:93069008-93069027 | None:intergenic | 25.0% |
| !! | AAAGATTTTATCAGACACAA+AGG | + | chr3_1:93069009-93069028 | None:intergenic | 25.0% |
| !! | TATGCATTTTTACAAATACC+TGG | + | chr3_1:93069243-93069262 | None:intergenic | 25.0% |
| !!! | ATGTGTGCATAGATTTTTTT+TGG | - | chr3_1:93069548-93069567 | Msa0388620:intron | 25.0% |
| !!! | TGTGTGCATAGATTTTTTTT+GGG | - | chr3_1:93069549-93069568 | Msa0388620:intron | 25.0% |
| !!! | ATTTTTATTTGCAACTATCC+AGG | + | chr3_1:93069605-93069624 | None:intergenic | 25.0% |
| ! | AACTGTTAAATTACATTGAC+TGG | - | chr3_1:93069796-93069815 | Msa0388620:intron | 25.0% |
| !!! | ATAACATCAATTTTTTCCAC+AGG | - | chr3_1:93069950-93069969 | Msa0388620:intron | 25.0% |
| !!! | TAATGCTTATTTTAGTTGCA+AGG | - | chr3_1:93070002-93070021 | Msa0388620:intron | 25.0% |
| !!! | CTTTTGTTTACTAGTTTTTG+TGG | - | chr3_1:93070094-93070113 | Msa0388620:CDS | 25.0% |
| !!! | GAGAAGTAAGTTTAATTTTG+TGG | - | chr3_1:93070246-93070265 | Msa0388620:intron | 25.0% |
| ! | TGGATATAATATACTGTTGA+GGG | - | chr3_1:93070266-93070285 | Msa0388620:intron | 25.0% |
| !! | GCTCTTTAATATCTTTAAAG+TGG | + | chr3_1:93070412-93070431 | None:intergenic | 25.0% |
| ! | ATAATCATGTTGAAAGTTTC+TGG | - | chr3_1:93070860-93070879 | Msa0388620:intron | 25.0% |
| ! | CACACAGAGAAAAAAAAATT+AGG | + | chr3_1:93070967-93070986 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTCTGTGTGATT+TGG | - | chr3_1:93070970-93070989 | Msa0388620:intron | 25.0% |
| ! | ATGAAGAAATATCATCTTGA+CGG | + | chr3_1:93071072-93071091 | None:intergenic | 25.0% |
| !!! | ATCACATTGTTATTTTGCAA+TGG | + | chr3_1:93071151-93071170 | None:intergenic | 25.0% |
| ! | GTAAGTTACAAAAAAAAAGG+GGG | + | chr3_1:93071534-93071553 | None:intergenic | 25.0% |
| ! | CGTAAGTTACAAAAAAAAAG+GGG | + | chr3_1:93071535-93071554 | None:intergenic | 25.0% |
| !! | AAAATATGATCCATTCCTTT+TGG | - | chr3_1:93071610-93071629 | Msa0388620:CDS | 25.0% |
| !! | AAATATGATCCATTCCTTTT+GGG | - | chr3_1:93071611-93071630 | Msa0388620:CDS | 25.0% |
| ! | TTACAAGCAGAAAGAATAAT+TGG | + | chr3_1:93071661-93071680 | None:intergenic | 25.0% |
| TTGAATTGCTTCTTCAGATT+GGG | + | chr3_1:93068809-93068828 | None:intergenic | 30.0% | |
| ! | TGATTTAGTTCCTGAAATTG+AGG | - | chr3_1:93069334-93069353 | Msa0388620:intron | 30.0% |
| GCACACATTCTAAACATATA+TGG | + | chr3_1:93069536-93069555 | None:intergenic | 30.0% | |
| !! | TTGACTGGTTTGATTGATTA+CGG | - | chr3_1:93069811-93069830 | Msa0388620:intron | 30.0% |
| ! | TTTTCATGGAATCAACAATG+TGG | + | chr3_1:93070127-93070146 | None:intergenic | 30.0% |
| ATGAATTAATCTAAGAAGCC+AGG | + | chr3_1:93070155-93070174 | None:intergenic | 30.0% | |
| AAGAAAGATAGAGGCAAAAA+TGG | + | chr3_1:93070188-93070207 | None:intergenic | 30.0% | |
| ! | GCATTGATAAAGAAAGATAG+AGG | + | chr3_1:93070197-93070216 | None:intergenic | 30.0% |
| GTGGATATAATATACTGTTG+AGG | - | chr3_1:93070265-93070284 | Msa0388620:intron | 30.0% | |
| GGATATAATATACTGTTGAG+GGG | - | chr3_1:93070267-93070286 | Msa0388620:intron | 30.0% | |
| ! | AACAGAGTACCTAATTTAGA+GGG | - | chr3_1:93070348-93070367 | Msa0388620:intron | 30.0% |
| !! | TAATATCTTTAAAGTGGAGC+TGG | + | chr3_1:93070406-93070425 | None:intergenic | 30.0% |
| AGTTCTTCATAACCACATTA+AGG | - | chr3_1:93070533-93070552 | Msa0388620:intron | 30.0% | |
| !! | CAGAAAAACAAGCTCTAAAT+TGG | + | chr3_1:93070577-93070596 | None:intergenic | 30.0% |
| !! | AGAGCTTGTTTTTCTGTTTA+AGG | - | chr3_1:93070581-93070600 | Msa0388620:CDS | 30.0% |
| !!! | TTTTAGGGCTGTTTAGTTTA+AGG | + | chr3_1:93070776-93070795 | None:intergenic | 30.0% |
| CATCATGTATCGTATAATGT+GGG | - | chr3_1:93070890-93070909 | Msa0388620:intron | 30.0% | |
| AAAAAAAAACACCCAATTGC+AGG | + | chr3_1:93071232-93071251 | None:intergenic | 30.0% | |
| ATCATGAATAAAACAGTAGG+TGG | + | chr3_1:93071358-93071377 | None:intergenic | 30.0% | |
| AGCAAATATGATCTTGCTTT+AGG | + | chr3_1:93071400-93071419 | None:intergenic | 30.0% | |
| GATGAAACTAAACTTAGTCT+TGG | + | chr3_1:93071560-93071579 | None:intergenic | 30.0% | |
| ! | AATATGATCCATTCCTTTTG+GGG | - | chr3_1:93071612-93071631 | Msa0388620:CDS | 30.0% |
| GTTGAATTGCTTCTTCAGAT+TGG | + | chr3_1:93068810-93068829 | None:intergenic | 35.0% | |
| !! | GTTTCCTTTGAAGAGCTTTT+AGG | - | chr3_1:93069135-93069154 | Msa0388620:intron | 35.0% |
| ! | ATCTTCGAGTTCGATTAGAT+CGG | + | chr3_1:93069193-93069212 | None:intergenic | 35.0% |
| ! | TTTAGTTCCTGAAATTGAGG+AGG | - | chr3_1:93069337-93069356 | Msa0388620:intron | 35.0% |
| AATTTATCATCCGAAACCTG+CGG | + | chr3_1:93069389-93069408 | None:intergenic | 35.0% | |
| AGTGATCCATAGAAAGAAGA+GGG | + | chr3_1:93069419-93069438 | None:intergenic | 35.0% | |
| TTTCTATGGATCACTCTCAA+TGG | - | chr3_1:93069424-93069443 | Msa0388620:CDS | 35.0% | |
| TCATACTTTGGTTGATCTCT+AGG | - | chr3_1:93069508-93069527 | Msa0388620:intron | 35.0% | |
| CTGAATGTAATGTTAAGTCC+TGG | - | chr3_1:93069584-93069603 | Msa0388620:intron | 35.0% | |
| !!! | TATAGCTTTGTAGTTTTCCC+TGG | - | chr3_1:93069745-93069764 | Msa0388620:intron | 35.0% |
| AAGCTATAACACAGTTTCCA+GGG | + | chr3_1:93069765-93069784 | None:intergenic | 35.0% | |
| AAAGCTATAACACAGTTTCC+AGG | + | chr3_1:93069766-93069785 | None:intergenic | 35.0% | |
| TGGAAACTGTGTTATAGCTT+TGG | - | chr3_1:93069765-93069784 | Msa0388620:intron | 35.0% | |
| ! | TCTTTGAGTTTGAAACAGCT+TGG | - | chr3_1:93069881-93069900 | Msa0388620:intron | 35.0% |
| ! | CTTTGAGTTTGAAACAGCTT+GGG | - | chr3_1:93069882-93069901 | Msa0388620:intron | 35.0% |
| TCAAAAAACCAAAACCACTG+GGG | + | chr3_1:93070061-93070080 | None:intergenic | 35.0% | |
| GTCAAAAAACCAAAACCACT+GGG | + | chr3_1:93070062-93070081 | None:intergenic | 35.0% | |
| AGTCAAAAAACCAAAACCAC+TGG | + | chr3_1:93070063-93070082 | None:intergenic | 35.0% | |
| CTTTCTTTATCAATGCTTGC+AGG | - | chr3_1:93070201-93070220 | Msa0388620:intron | 35.0% | |
| TCTGTTCACTCATAACTTGA+GGG | + | chr3_1:93070334-93070353 | None:intergenic | 35.0% | |
| ! | GAACAGAGTACCTAATTTAG+AGG | - | chr3_1:93070347-93070366 | Msa0388620:intron | 35.0% |
| !!! | ATGGGAGGTAAGGTTTTTTA+TGG | - | chr3_1:93070473-93070492 | Msa0388620:intron | 35.0% |
| CCAGTTAACTATCCTTAATG+TGG | + | chr3_1:93070548-93070567 | None:intergenic | 35.0% | |
| CCACATTAAGGATAGTTAAC+TGG | - | chr3_1:93070545-93070564 | Msa0388620:intron | 35.0% | |
| GCATCATGTATCGTATAATG+TGG | - | chr3_1:93070889-93070908 | Msa0388620:intron | 35.0% | |
| GTGATGCTTCTTAGATACTT+TGG | - | chr3_1:93070924-93070943 | Msa0388620:intron | 35.0% | |
| AAGATCTGAAGAAGCAAAGA+TGG | + | chr3_1:93071118-93071137 | None:intergenic | 35.0% | |
| ! | TATTTTGCAATGGTCGAATC+AGG | + | chr3_1:93071141-93071160 | None:intergenic | 35.0% |
| TAATCCATATGACCTGCAAT+TGG | - | chr3_1:93071217-93071236 | Msa0388620:intron | 35.0% | |
| AATCCATATGACCTGCAATT+GGG | - | chr3_1:93071218-93071237 | Msa0388620:intron | 35.0% | |
| AAAAAATTGCTTCTGTGGAG+TGG | + | chr3_1:93071290-93071309 | None:intergenic | 35.0% | |
| GGCATCATGAATAAAACAGT+AGG | + | chr3_1:93071361-93071380 | None:intergenic | 35.0% | |
| TTAGGTCCTGAAAAAACAGA+CGG | + | chr3_1:93071382-93071401 | None:intergenic | 35.0% | |
| ! | CAGAAGAAGTCAAACGTTTT+CGG | + | chr3_1:93071506-93071525 | None:intergenic | 35.0% |
| ATTCTTTCTGCTTGTAACTG+TGG | - | chr3_1:93071664-93071683 | Msa0388620:exon | 35.0% | |
| GCTTCTTCAGATTGGGAATT+GGG | + | chr3_1:93068802-93068821 | None:intergenic | 40.0% | |
| TGCTTCTTCAGATTGGGAAT+TGG | + | chr3_1:93068803-93068822 | None:intergenic | 40.0% | |
| TCGTTGCAGAAGCTTGAAAT+TGG | + | chr3_1:93068849-93068868 | None:intergenic | 40.0% | |
| TTCAAGCTTCTGCAACGAAT+TGG | - | chr3_1:93068851-93068870 | Msa0388620:three_prime_UTR | 40.0% | |
| !! | AATGGATTGAACAAGAGCGT+CGG | + | chr3_1:93068907-93068926 | None:intergenic | 40.0% |
| TCTTGTACAATTCGTTGCAG+TGG | + | chr3_1:93069161-93069180 | None:intergenic | 40.0% | |
| GATCGTCTTAAAAGCTGCTA+TGG | - | chr3_1:93069210-93069229 | Msa0388620:intron | 40.0% | |
| TCATCTTCCTCCTCAATTTC+AGG | + | chr3_1:93069347-93069366 | None:intergenic | 40.0% | |
| GCAGGTTTCGGATGATAAAT+TGG | - | chr3_1:93069388-93069407 | Msa0388620:intron | 40.0% | |
| GATAGTCCCTCTTCTTTCTA+TGG | - | chr3_1:93069410-93069429 | Msa0388620:CDS | 40.0% | |
| GAGTGATCCATAGAAAGAAG+AGG | + | chr3_1:93069420-93069439 | None:intergenic | 40.0% | |
| GAACTTCTTGAAGCCAGAAT+CGG | + | chr3_1:93069450-93069469 | None:intergenic | 40.0% | |
| CCAGATGGTAAAATGTTGCA+GGG | - | chr3_1:93069651-93069670 | Msa0388620:intron | 40.0% | |
| GATTACGGTTCTTGAAAAGC+TGG | - | chr3_1:93069826-93069845 | Msa0388620:intron | 40.0% | |
| ! | CTAGCTACTTTAGCATCTGA+AGG | - | chr3_1:93069920-93069939 | Msa0388620:intron | 40.0% |
| CTTTAGCATCTGAAGGTTAG+TGG | - | chr3_1:93069927-93069946 | Msa0388620:intron | 40.0% | |
| ! | AGGCATGCTTGTTACTTACT+TGG | - | chr3_1:93069970-93069989 | Msa0388620:intron | 40.0% |
| GATTCCATGAAAACTAGACC+TGG | - | chr3_1:93070134-93070153 | Msa0388620:intron | 40.0% | |
| CTGTTCACTCATAACTTGAG+GGG | + | chr3_1:93070333-93070352 | None:intergenic | 40.0% | |
| CTCTGTTCACTCATAACTTG+AGG | + | chr3_1:93070335-93070354 | None:intergenic | 40.0% | |
| ACCTAATTTAGAGGGAGACA+AGG | - | chr3_1:93070356-93070375 | Msa0388620:intron | 40.0% | |
| CCTAATTTAGAGGGAGACAA+GGG | - | chr3_1:93070357-93070376 | Msa0388620:intron | 40.0% | |
| CTAATTTAGAGGGAGACAAG+GGG | - | chr3_1:93070358-93070377 | Msa0388620:intron | 40.0% | |
| ATGTCTTCCTGCCTATATGA+AGG | - | chr3_1:93070440-93070459 | Msa0388620:intron | 40.0% | |
| TGATGCTAGAGCCTTCATAT+AGG | + | chr3_1:93070454-93070473 | None:intergenic | 40.0% | |
| ! | ATATGAAGGCTCTAGCATCA+TGG | - | chr3_1:93070454-93070473 | Msa0388620:intron | 40.0% |
| ! | TATGAAGGCTCTAGCATCAT+GGG | - | chr3_1:93070455-93070474 | Msa0388620:intron | 40.0% |
| ATGAAGAACTAGCATCCCTT+TGG | + | chr3_1:93070523-93070542 | None:intergenic | 40.0% | |
| TGCTAAAGAGGGATCTTGAA+AGG | + | chr3_1:93071189-93071208 | None:intergenic | 40.0% | |
| ATGTGTGAATGGTAAGTTGC+TGG | + | chr3_1:93071263-93071282 | None:intergenic | 40.0% | |
| AAACAGTAGGTGGTAAGTCA+GGG | + | chr3_1:93071348-93071367 | None:intergenic | 40.0% | |
| AAAACAGTAGGTGGTAAGTC+AGG | + | chr3_1:93071349-93071368 | None:intergenic | 40.0% | |
| !!! | ATGATGCCGTCTGTTTTTTC+AGG | - | chr3_1:93071373-93071392 | Msa0388620:CDS | 40.0% |
| AATTACTGAACCTCCCCAAA+AGG | + | chr3_1:93071628-93071647 | None:intergenic | 40.0% | |
| !! | GGGAATTGGGTTGAACTTTG+CGG | + | chr3_1:93068789-93068808 | None:intergenic | 45.0% |
| TGAATCGAGCAGTTCGAGAT+CGG | + | chr3_1:93069103-93069122 | None:intergenic | 45.0% | |
| GTGGCCTAAAAGCTCTTCAA+AGG | + | chr3_1:93069142-93069161 | None:intergenic | 45.0% | |
| TTACCATCTGGCTGAACCAA+CGG | + | chr3_1:93069642-93069661 | None:intergenic | 45.0% | |
| GCCAGATGGTAAAATGTTGC+AGG | - | chr3_1:93069650-93069669 | Msa0388620:intron | 45.0% | |
| ! | CCCTGCAACATTTTACCATC+TGG | + | chr3_1:93069654-93069673 | None:intergenic | 45.0% |
| GTAAGTAACAAGCATGCCTG+TGG | + | chr3_1:93069969-93069988 | None:intergenic | 45.0% | |
| ! | CATTGTTCCATTTTCCCCAG+TGG | - | chr3_1:93070044-93070063 | Msa0388620:CDS | 45.0% |
| ! | TCCATTTTCCCCAGTGGTTT+TGG | - | chr3_1:93070050-93070069 | Msa0388620:CDS | 45.0% |
| ACCAAAACCACTGGGGAAAA+TGG | + | chr3_1:93070054-93070073 | None:intergenic | 45.0% | |
| !!! | GAAGCCAGGTCTAGTTTTCA+TGG | + | chr3_1:93070141-93070160 | None:intergenic | 45.0% |
| CCCTTGTCTCCCTCTAAATT+AGG | + | chr3_1:93070360-93070379 | None:intergenic | 45.0% | |
| ! | TCTGTGTGATTTGGCCTTCT+AGG | - | chr3_1:93070979-93070998 | Msa0388620:intron | 45.0% |
| TTCCATCGGTCTTCTTGCTT+AGG | + | chr3_1:93071039-93071058 | None:intergenic | 45.0% | |
| ACGGAAGAAGTTGCTTCCAT+CGG | + | chr3_1:93071053-93071072 | None:intergenic | 45.0% | |
| ACACCCAATTGCAGGTCATA+TGG | + | chr3_1:93071224-93071243 | None:intergenic | 45.0% | |
| GGAGTGGCTTAATGTGTGAA+TGG | + | chr3_1:93071274-93071293 | None:intergenic | 45.0% | |
| GTAAGTCAGGGCTAGAATTC+AGG | + | chr3_1:93071336-93071355 | None:intergenic | 45.0% | |
| CAACTGTCTCAACGACCATA+CGG | + | chr3_1:93071441-93071460 | None:intergenic | 45.0% | |
| ATGGTCGTTGAGACAGTTGA+TGG | - | chr3_1:93071442-93071461 | Msa0388620:intron | 45.0% | |
| !! | ATGATCCATTCCTTTTGGGG+AGG | - | chr3_1:93071615-93071634 | Msa0388620:CDS | 45.0% |
| !!! | TTTTTTTTTAAAATAGTTTA+TGG | - | chr3_1:93071305-93071324 | Msa0388620:CDS | 5.0% |
| !!! | TTTTTTTTAAAATAGTTTAT+GGG | - | chr3_1:93071306-93071325 | Msa0388620:CDS | 5.0% |
| !! | TTGGGTTGAACTTTGCGGCT+CGG | + | chr3_1:93068784-93068803 | None:intergenic | 50.0% |
| !! | TTGAACAAGAGCGTCGGAAG+AGG | + | chr3_1:93068901-93068920 | None:intergenic | 50.0% |
| AGGAACAGGTCTGCGATGAA+TGG | + | chr3_1:93068925-93068944 | None:intergenic | 50.0% | |
| !! | GAGAGAGTACTGAGAGGAAC+AGG | + | chr3_1:93068939-93068958 | None:intergenic | 50.0% |
| !! | GAGAGAGAGAGAGTACTGAG+AGG | + | chr3_1:93068945-93068964 | None:intergenic | 50.0% |
| CACTTGAAGTTGAAACGCGG+CGG | + | chr3_1:93069080-93069099 | None:intergenic | 50.0% | |
| CGGCACTTGAAGTTGAAACG+CGG | + | chr3_1:93069083-93069102 | None:intergenic | 50.0% | |
| GCTCGATTCAATGTCCAGCA+CGG | - | chr3_1:93069113-93069132 | Msa0388620:intron | 50.0% | |
| CTCTTCAAAGGAAACCGTGC+TGG | + | chr3_1:93069130-93069149 | None:intergenic | 50.0% | |
| ! | TTATGATGTACAAGCGCCGC+AGG | - | chr3_1:93069370-93069389 | Msa0388620:intron | 50.0% |
| ! | TCACTCTCAATGGCCGATTC+TGG | - | chr3_1:93069434-93069453 | Msa0388620:CDS | 50.0% |
| ATCACATACGGTAGTCCCGT+TGG | - | chr3_1:93069623-93069642 | Msa0388620:intron | 50.0% | |
| TACCATCTGGCTGAACCAAC+GGG | + | chr3_1:93069641-93069660 | None:intergenic | 50.0% | |
| AGAGGGAGACAAGGGGAATT+TGG | - | chr3_1:93070365-93070384 | Msa0388620:intron | 50.0% | |
| GCTAGAGCCTTCATATAGGC+AGG | + | chr3_1:93070450-93070469 | None:intergenic | 50.0% | |
| CTCTAGCATCATGGGAGGTA+AGG | - | chr3_1:93070463-93070482 | Msa0388620:intron | 50.0% | |
| AGCCACGAGTAGATCCTAGA+AGG | + | chr3_1:93070996-93071015 | None:intergenic | 50.0% | |
| AGCCTAAGCAAGAAGACCGA+TGG | - | chr3_1:93071034-93071053 | Msa0388620:CDS | 50.0% | |
| TCTAGTGCGCATGAACCGTA+TGG | - | chr3_1:93071423-93071442 | Msa0388620:CDS | 50.0% | |
| CTGAACCTCCCCAAAAGGAA+TGG | + | chr3_1:93071623-93071642 | None:intergenic | 50.0% | |
| !! | GCGGTTGAGGCATTGTACGA+AGG | + | chr3_1:93069061-93069080 | None:intergenic | 55.0% |
| AAGTTGAAACGCGGCGGTTG+AGG | + | chr3_1:93069074-93069093 | None:intergenic | 55.0% | |
| AGCTGCTATGGCTACGTTCC+AGG | - | chr3_1:93069222-93069241 | Msa0388620:intron | 55.0% | |
| ! | TGTACAAGCGCCGCAGGTTT+CGG | - | chr3_1:93069376-93069395 | Msa0388620:intron | 55.0% |
| CTTGAGGGGTGAGATCATGC+AGG | + | chr3_1:93070319-93070338 | None:intergenic | 55.0% | |
| ! | GAAGGCTCTAGCATCATGGG+AGG | - | chr3_1:93070458-93070477 | Msa0388620:intron | 55.0% |
| !! | GGCCTTCTAGGATCTACTCG+TGG | - | chr3_1:93070991-93071010 | Msa0388620:intron | 55.0% |
| !! | GTCCCGTTGGTTCAGCCAGA+TGG | - | chr3_1:93069636-93069655 | Msa0388620:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93068781 | 93071720 | 93068781 | ID=Msa0388620;Name=Msa0388620 |
| chr3_1 | mRNA | 93068781 | 93071720 | 93068781 | ID=Msa0388620-mRNA-1;Parent=Msa0388620;Name=Msa0388620-mRNA-1;_AED=0.03;_eAED=0.03;_QI=50|1|1|1|1|1|8|231|293 |
| chr3_1 | exon | 93068781 | 93069106 | 93068781 | ID=Msa0388620-mRNA-1:exon:26232;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93069401 | 93069500 | 93069401 | ID=Msa0388620-mRNA-1:exon:26231;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93070022 | 93070148 | 93070022 | ID=Msa0388620-mRNA-1:exon:26230;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93070251 | 93070278 | 93070251 | ID=Msa0388620-mRNA-1:exon:26229;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93070560 | 93070630 | 93070560 | ID=Msa0388620-mRNA-1:exon:26228;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93071018 | 93071159 | 93071018 | ID=Msa0388620-mRNA-1:exon:26227;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93071258 | 93071458 | 93071258 | ID=Msa0388620-mRNA-1:exon:26226;Parent=Msa0388620-mRNA-1 |
| chr3_1 | exon | 93071553 | 93071720 | 93071553 | ID=Msa0388620-mRNA-1:exon:26225;Parent=Msa0388620-mRNA-1 |
| chr3_1 | five_prime_UTR | 93071671 | 93071720 | 93071671 | ID=Msa0388620-mRNA-1:five_prime_utr;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93071553 | 93071670 | 93071553 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93071258 | 93071458 | 93071258 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93071018 | 93071159 | 93071018 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93070560 | 93070630 | 93070560 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93070251 | 93070278 | 93070251 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93070022 | 93070148 | 93070022 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93069401 | 93069500 | 93069401 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | CDS | 93069012 | 93069106 | 93069012 | ID=Msa0388620-mRNA-1:cds;Parent=Msa0388620-mRNA-1 |
| chr3_1 | three_prime_UTR | 93068781 | 93069011 | 93068781 | ID=Msa0388620-mRNA-1:three_prime_utr;Parent=Msa0388620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
