Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0530100 | XP_013454577.1 | 90.815 | 577 | 10 | 2 | 1 | 534 | 1 | 577 | 0.0 | 1056 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0530100 | sp|Q9C512|MNS1_ARATH | 73.007 | 552 | 94 | 7 | 1 | 508 | 1 | 541 | 0.0 | 782 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0530100 | A0A072UHK5 | 90.815 | 577 | 10 | 2 | 1 | 534 | 1 | 577 | 0.0 | 1056 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001520 | Msa0530100 | 0.801125 | 1.043302e-48 | -8.615850e-47 |
Msa0008220 | Msa0530100 | 0.804688 | 1.915331e-49 | -8.615850e-47 |
Msa0015460 | Msa0530100 | 0.837627 | 4.649437e-57 | -8.615850e-47 |
Msa0015480 | Msa0530100 | 0.829953 | 3.857778e-55 | -8.615850e-47 |
Msa0017320 | Msa0530100 | 0.806044 | 9.958496e-50 | -8.615850e-47 |
Msa0033880 | Msa0530100 | 0.817468 | 3.246400e-52 | -8.615850e-47 |
Msa0037160 | Msa0530100 | 0.803331 | 3.668513e-49 | -8.615850e-47 |
Msa0037540 | Msa0530100 | -0.805574 | 1.250113e-49 | -8.615850e-47 |
Msa0037590 | Msa0530100 | -0.801569 | 8.465048e-49 | -8.615850e-47 |
Msa0056450 | Msa0530100 | 0.801940 | 7.101857e-49 | -8.615850e-47 |
Msa0057370 | Msa0530100 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
Msa0058600 | Msa0530100 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
Msa0064700 | Msa0530100 | 0.820880 | 5.429818e-53 | -8.615850e-47 |
Msa0065010 | Msa0530100 | 0.820869 | 5.459622e-53 | -8.615850e-47 |
Msa0070170 | Msa0530100 | 0.827690 | 1.361278e-54 | -8.615850e-47 |
Msa0076780 | Msa0530100 | 0.814835 | 1.258406e-51 | -8.615850e-47 |
Msa0081650 | Msa0530100 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
Msa0082680 | Msa0530100 | -0.812623 | 3.862471e-51 | -8.615850e-47 |
Msa0090390 | Msa0530100 | 0.800662 | 1.297565e-48 | -8.615850e-47 |
Msa0092410 | Msa0530100 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
Msa0097590 | Msa0530100 | 0.825539 | 4.435881e-54 | -8.615850e-47 |
Msa0097610 | Msa0530100 | 0.818660 | 1.745568e-52 | -8.615850e-47 |
Msa0100090 | Msa0530100 | 0.822405 | 2.411210e-53 | -8.615850e-47 |
Msa0103250 | Msa0530100 | 0.800430 | 1.446631e-48 | -8.615850e-47 |
Msa0104700 | Msa0530100 | 0.807284 | 5.448741e-50 | -8.615850e-47 |
Msa0109590 | Msa0530100 | 0.850068 | 2.155563e-60 | -8.615850e-47 |
Msa0118540 | Msa0530100 | 0.806862 | 6.692667e-50 | -8.615850e-47 |
Msa0126770 | Msa0530100 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
Msa0127020 | Msa0530100 | 0.802780 | 4.768747e-49 | -8.615850e-47 |
Msa0127040 | Msa0530100 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
Msa0127850 | Msa0530100 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
Msa0138020 | Msa0530100 | 0.820440 | 6.850040e-53 | -8.615850e-47 |
Msa0146770 | Msa0530100 | 0.823783 | 1.150054e-53 | -8.615850e-47 |
Msa0150990 | Msa0530100 | 0.809882 | 1.518598e-50 | -8.615850e-47 |
Msa0155880 | Msa0530100 | 0.821075 | 4.895092e-53 | -8.615850e-47 |
Msa0160670 | Msa0530100 | 0.823569 | 1.290979e-53 | -8.615850e-47 |
Msa0169280 | Msa0530100 | 0.800773 | 1.231712e-48 | -8.615850e-47 |
Msa0174000 | Msa0530100 | 0.819270 | 1.268132e-52 | -8.615850e-47 |
Msa0174390 | Msa0530100 | 0.803015 | 4.265362e-49 | -8.615850e-47 |
Msa0175200 | Msa0530100 | 0.802769 | 4.793946e-49 | -8.615850e-47 |
Msa0177210 | Msa0530100 | 0.814983 | 1.166592e-51 | -8.615850e-47 |
Msa0177700 | Msa0530100 | -0.805459 | 1.321260e-49 | -8.615850e-47 |
Msa0178800 | Msa0530100 | 0.828813 | 7.295439e-55 | -8.615850e-47 |
Msa0181730 | Msa0530100 | 0.802265 | 6.089717e-49 | -8.615850e-47 |
Msa0185510 | Msa0530100 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
Msa0189300 | Msa0530100 | 0.807276 | 5.470663e-50 | -8.615850e-47 |
Msa0197660 | Msa0530100 | 0.824214 | 9.112536e-54 | -8.615850e-47 |
Msa0215590 | Msa0530100 | 0.807942 | 3.950960e-50 | -8.615850e-47 |
Msa0217700 | Msa0530100 | 0.809140 | 2.191822e-50 | -8.615850e-47 |
Msa0220080 | Msa0530100 | 0.801227 | 9.944699e-49 | -8.615850e-47 |
Msa0225670 | Msa0530100 | 0.806181 | 9.318648e-50 | -8.615850e-47 |
Msa0229360 | Msa0530100 | 0.810149 | 1.330273e-50 | -8.615850e-47 |
Msa0231660 | Msa0530100 | 0.821337 | 4.260677e-53 | -8.615850e-47 |
Msa0233370 | Msa0530100 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
Msa0371250 | Msa0530100 | 0.807507 | 4.886886e-50 | -8.615850e-47 |
Msa0382400 | Msa0530100 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
Msa0385490 | Msa0530100 | 0.829823 | 4.148053e-55 | -8.615850e-47 |
Msa0387370 | Msa0530100 | 0.822474 | 2.324013e-53 | -8.615850e-47 |
Msa0387910 | Msa0530100 | 0.810385 | 1.183433e-50 | -8.615850e-47 |
Msa0420030 | Msa0530100 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
Msa0428050 | Msa0530100 | 0.805104 | 1.568414e-49 | -8.615850e-47 |
Msa0434180 | Msa0530100 | 0.810777 | 9.737572e-51 | -8.615850e-47 |
Msa0435690 | Msa0530100 | 0.816876 | 4.410044e-52 | -8.615850e-47 |
Msa0437400 | Msa0530100 | 0.819958 | 8.834849e-53 | -8.615850e-47 |
Msa0467220 | Msa0530100 | 0.829010 | 6.538547e-55 | -8.615850e-47 |
Msa0468320 | Msa0530100 | 0.818284 | 2.123739e-52 | -8.615850e-47 |
Msa0471420 | Msa0530100 | 0.824827 | 6.535575e-54 | -8.615850e-47 |
Msa0480000 | Msa0530100 | 0.800506 | 1.396251e-48 | -8.615850e-47 |
Msa0481030 | Msa0530100 | 0.819507 | 1.119936e-52 | -8.615850e-47 |
Msa0481280 | Msa0530100 | 0.808905 | 2.461212e-50 | -8.615850e-47 |
Msa0482180 | Msa0530100 | 0.826742 | 2.296212e-54 | -8.615850e-47 |
Msa0239490 | Msa0530100 | 0.821064 | 4.924383e-53 | -8.615850e-47 |
Msa0239800 | Msa0530100 | 0.832502 | 9.114815e-56 | -8.615850e-47 |
Msa0241140 | Msa0530100 | 0.814393 | 1.576668e-51 | -8.615850e-47 |
Msa0241470 | Msa0530100 | 0.822164 | 2.742293e-53 | -8.615850e-47 |
Msa0245310 | Msa0530100 | 0.800058 | 1.722019e-48 | -8.615850e-47 |
Msa0257500 | Msa0530100 | 0.824944 | 6.132655e-54 | -8.615850e-47 |
Msa0259220 | Msa0530100 | 0.809983 | 1.444608e-50 | -8.615850e-47 |
Msa0261360 | Msa0530100 | 0.808479 | 3.035478e-50 | -8.615850e-47 |
Msa0271360 | Msa0530100 | 0.810227 | 1.279963e-50 | -8.615850e-47 |
Msa0277820 | Msa0530100 | 0.806795 | 6.916935e-50 | -8.615850e-47 |
Msa0279240 | Msa0530100 | 0.801264 | 9.772688e-49 | -8.615850e-47 |
Msa0296820 | Msa0530100 | 0.821308 | 4.325738e-53 | -8.615850e-47 |
Msa0296980 | Msa0530100 | -0.814360 | 1.603167e-51 | -8.615850e-47 |
Msa0304100 | Msa0530100 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
Msa0317510 | Msa0530100 | 0.819815 | 9.525923e-53 | -8.615850e-47 |
Msa0333650 | Msa0530100 | 0.807950 | 3.933933e-50 | -8.615850e-47 |
Msa0336310 | Msa0530100 | 0.802760 | 4.814161e-49 | -8.615850e-47 |
Msa0340690 | Msa0530100 | 0.841465 | 4.673565e-58 | -8.615850e-47 |
Msa0340710 | Msa0530100 | 0.833240 | 5.975418e-56 | -8.615850e-47 |
Msa0341840 | Msa0530100 | 0.800988 | 1.112947e-48 | -8.615850e-47 |
Msa0342010 | Msa0530100 | 0.823030 | 1.724879e-53 | -8.615850e-47 |
Msa0357830 | Msa0530100 | 0.805811 | 1.114709e-49 | -8.615850e-47 |
Msa0357840 | Msa0530100 | 0.801631 | 8.219611e-49 | -8.615850e-47 |
Msa0517090 | Msa0530100 | 0.807558 | 4.766052e-50 | -8.615850e-47 |
Msa0521670 | Msa0530100 | 0.833203 | 6.104470e-56 | -8.615850e-47 |
Msa0527910 | Msa0530100 | 0.824293 | 8.730046e-54 | -8.615850e-47 |
Msa0530100 | Msa0530290 | 0.804663 | 1.938660e-49 | -8.615850e-47 |
Msa0530100 | Msa0532930 | 0.812709 | 3.698587e-51 | -8.615850e-47 |
Msa0530100 | Msa0532980 | 0.818123 | 2.309827e-52 | -8.615850e-47 |
Msa0530100 | Msa0532990 | 0.812423 | 4.272098e-51 | -8.615850e-47 |
Msa0530100 | Msa0541040 | 0.818943 | 1.505481e-52 | -8.615850e-47 |
Msa0530100 | Msa0542130 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
Msa0530100 | Msa0546570 | 0.814578 | 1.434785e-51 | -8.615850e-47 |
Msa0530100 | Msa0576730 | 0.817336 | 3.477437e-52 | -8.615850e-47 |
Msa0530100 | Msa0586070 | 0.810657 | 1.033667e-50 | -8.615850e-47 |
Msa0530100 | Msa0587030 | 0.809816 | 1.569655e-50 | -8.615850e-47 |
Msa0530100 | Msa0589390 | 0.803084 | 4.126981e-49 | -8.615850e-47 |
Msa0530100 | Msa0597000 | 0.864292 | 1.350609e-64 | -8.615850e-47 |
Msa0530100 | Msa0602370 | 0.821752 | 3.417059e-53 | -8.615850e-47 |
Msa0530100 | Msa0603670 | 0.839573 | 1.461734e-57 | -8.615850e-47 |
Msa0530100 | Msa0605000 | 0.820910 | 5.342605e-53 | -8.615850e-47 |
Msa0530100 | Msa0609220 | 0.806345 | 8.607195e-50 | -8.615850e-47 |
Msa0530100 | Msa0610130 | 0.812923 | 3.319805e-51 | -8.615850e-47 |
Msa0530100 | Msa0610180 | 0.807699 | 4.448416e-50 | -8.615850e-47 |
Msa0530100 | Msa0615220 | 0.835395 | 1.720578e-56 | -8.615850e-47 |
Msa0530100 | Msa0616240 | 0.811272 | 7.607982e-51 | -8.615850e-47 |
Msa0530100 | Msa0619920 | 0.806801 | 6.896726e-50 | -8.615850e-47 |
Msa0530100 | Msa0620620 | 0.857102 | 2.051351e-62 | -8.615850e-47 |
Msa0530100 | Msa0626850 | 0.820265 | 7.513404e-53 | -8.615850e-47 |
Msa0530100 | Msa0626940 | 0.811415 | 7.081145e-51 | -8.615850e-47 |
Msa0530100 | Msa0629650 | 0.803769 | 2.976135e-49 | -8.615850e-47 |
Msa0530100 | Msa0638350 | 0.812279 | 4.591933e-51 | -8.615850e-47 |
Msa0530100 | Msa0643320 | 0.838368 | 2.998477e-57 | -8.615850e-47 |
Msa0530100 | Msa0661320 | 0.802562 | 5.288214e-49 | -8.615850e-47 |
Msa0530100 | Msa0664490 | 0.956408 | 3.167849e-114 | -8.615850e-47 |
Msa0530100 | Msa0664970 | 0.806967 | 6.360539e-50 | -8.615850e-47 |
Msa0530100 | Msa0667740 | 0.802969 | 4.359321e-49 | -8.615850e-47 |
Msa0530100 | Msa0669760 | 0.800084 | 1.701237e-48 | -8.615850e-47 |
Msa0530100 | Msa0682090 | 0.833835 | 4.244907e-56 | -8.615850e-47 |
Msa0530100 | Msa0682140 | 0.837827 | 4.130036e-57 | -8.615850e-47 |
Msa0530100 | Msa0683140 | 0.850963 | 1.208231e-60 | -8.615850e-47 |
Msa0530100 | Msa0683600 | 0.835640 | 1.492091e-56 | -8.615850e-47 |
Msa0530100 | Msa0685140 | 0.810607 | 1.059778e-50 | -8.615850e-47 |
Msa0530100 | Msa0689780 | 0.820979 | 5.152354e-53 | -8.615850e-47 |
Msa0530100 | Msa0699570 | 0.817695 | 2.886024e-52 | -8.615850e-47 |
Msa0530100 | Msa0702150 | 0.804896 | 1.733323e-49 | -8.615850e-47 |
Msa0530100 | Msa0702270 | 0.819660 | 1.033331e-52 | -8.615850e-47 |
Msa0530100 | Msa0703910 | 0.828925 | 6.856994e-55 | -8.615850e-47 |
Msa0530100 | Msa0705390 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
Msa0530100 | Msa0711150 | 0.830011 | 3.733730e-55 | -8.615850e-47 |
Msa0530100 | Msa0715410 | 0.845031 | 5.231057e-59 | -8.615850e-47 |
Msa0530100 | Msa0742150 | 0.828224 | 1.012549e-54 | -8.615850e-47 |
Msa0530100 | Msa0749440 | 0.806818 | 6.837805e-50 | -8.615850e-47 |
Msa0530100 | Msa0750850 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
Msa0530100 | Msa0763920 | 0.800022 | 1.751203e-48 | -8.615850e-47 |
Msa0530100 | Msa0817460 | 0.822061 | 2.897594e-53 | -8.615850e-47 |
Msa0530100 | Msa0822310 | -0.805517 | 1.284809e-49 | -8.615850e-47 |
Msa0530100 | Msa0823440 | 0.813454 | 2.538514e-51 | -8.615850e-47 |
Msa0530100 | Msa0826150 | 0.831762 | 1.389154e-55 | -8.615850e-47 |
Msa0530100 | Msa0826760 | 0.855936 | 4.514788e-62 | -8.615850e-47 |
Msa0530100 | Msa0830230 | 0.807733 | 4.375549e-50 | -8.615850e-47 |
Msa0530100 | Msa0831850 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
Msa0530100 | Msa0844110 | 0.817123 | 3.881989e-52 | -8.615850e-47 |
Msa0530100 | Msa0844390 | 0.803107 | 4.081646e-49 | -8.615850e-47 |
Msa0530100 | Msa0861470 | 0.827219 | 1.765522e-54 | -8.615850e-47 |
Msa0530100 | Msa0861570 | 0.829477 | 5.036230e-55 | -8.615850e-47 |
Msa0530100 | Msa0865330 | 0.811591 | 6.486181e-51 | -8.615850e-47 |
Msa0530100 | Msa0876360 | 0.813421 | 2.581980e-51 | -8.615850e-47 |
Msa0530100 | Msa0880040 | 0.816429 | 5.555378e-52 | -8.615850e-47 |
Msa0530100 | Msa0880810 | 0.803799 | 2.933777e-49 | -8.615850e-47 |
Msa0530100 | Msa0890550 | 0.828662 | 7.939040e-55 | -8.615850e-47 |
Msa0530100 | Msa0901320 | 0.807432 | 5.070546e-50 | -8.615850e-47 |
Msa0530100 | Msa0909010 | 0.808869 | 2.505893e-50 | -8.615850e-47 |
Msa0530100 | Msa0925770 | 0.817694 | 2.886582e-52 | -8.615850e-47 |
Msa0530100 | Msa0932100 | 0.811415 | 7.080184e-51 | -8.615850e-47 |
Msa0530100 | Msa0937330 | 0.842886 | 1.966713e-58 | -8.615850e-47 |
Msa0530100 | Msa0944870 | 0.821124 | 4.769281e-53 | -8.615850e-47 |
Msa0530100 | Msa0945120 | 0.800419 | 1.454314e-48 | -8.615850e-47 |
Msa0530100 | Msa0945440 | 0.803841 | 2.875700e-49 | -8.615850e-47 |
Msa0530100 | Msa0947530 | -0.808969 | 2.384537e-50 | -8.615850e-47 |
Msa0530100 | Msa0951400 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
Msa0530100 | Msa0964060 | 0.806775 | 6.983048e-50 | -8.615850e-47 |
Msa0530100 | Msa0970230 | 0.812936 | 3.298920e-51 | -8.615850e-47 |
Msa0530100 | Msa0974630 | 0.821654 | 3.600060e-53 | -8.615850e-47 |
Msa0530100 | Msa0978700 | 0.803410 | 3.532470e-49 | -8.615850e-47 |
Msa0530100 | Msa0980020 | 0.828317 | 9.614511e-55 | -8.615850e-47 |
Msa0530100 | Msa0993240 | 0.832061 | 1.171782e-55 | -8.615850e-47 |
Msa0530100 | Msa0994390 | 0.823175 | 1.595768e-53 | -8.615850e-47 |
Msa0530100 | Msa1000930 | 0.803670 | 3.120844e-49 | -8.615850e-47 |
Msa0530100 | Msa1040840 | 0.802030 | 6.807602e-49 | -8.615850e-47 |
Msa0530100 | Msa1052330 | 0.803988 | 2.679643e-49 | -8.615850e-47 |
Msa0530100 | Msa1064250 | 0.840912 | 6.534248e-58 | -8.615850e-47 |
Msa0530100 | Msa1070390 | 0.808262 | 3.377401e-50 | -8.615850e-47 |
Msa0530100 | Msa1071320 | 0.824977 | 6.024471e-54 | -8.615850e-47 |
Msa0530100 | Msa1083880 | 0.802839 | 4.638074e-49 | -8.615850e-47 |
Msa0530100 | Msa1088290 | 0.830292 | 3.188295e-55 | -8.615850e-47 |
Msa0530100 | Msa1089320 | 0.827026 | 1.963326e-54 | -8.615850e-47 |
Msa0530100 | Msa1093260 | 0.804149 | 2.480792e-49 | -8.615850e-47 |
Msa0530100 | Msa1107190 | 0.819000 | 1.461175e-52 | -8.615850e-47 |
Msa0530100 | Msa1111870 | 0.853068 | 3.050987e-61 | -8.615850e-47 |
Msa0530100 | Msa1118940 | 0.807027 | 6.175953e-50 | -8.615850e-47 |
Msa0530100 | Msa1126850 | 0.819373 | 1.201434e-52 | -8.615850e-47 |
Msa0530100 | Msa1144040 | 0.806861 | 6.696771e-50 | -8.615850e-47 |
Msa0530100 | Msa1144970 | 0.802233 | 6.184234e-49 | -8.615850e-47 |
Msa0530100 | Msa1152920 | 0.816996 | 4.146564e-52 | -8.615850e-47 |
Msa0530100 | Msa1156870 | 0.818371 | 2.029653e-52 | -8.615850e-47 |
Msa0530100 | Msa1163540 | 0.825793 | 3.862812e-54 | -8.615850e-47 |
Msa0530100 | Msa1176360 | 0.812496 | 4.117398e-51 | -8.615850e-47 |
Msa0530100 | Msa1176710 | 0.810229 | 1.278858e-50 | -8.615850e-47 |
Msa0530100 | Msa1180500 | 0.813093 | 3.047642e-51 | -8.615850e-47 |
Msa0530100 | Msa1182660 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
Msa0530100 | Msa1182690 | 0.802006 | 6.885346e-49 | -8.615850e-47 |
Msa0530100 | Msa1206310 | 0.812047 | 5.159375e-51 | -8.615850e-47 |
Msa0530100 | Msa1206360 | 0.805180 | 1.511580e-49 | -8.615850e-47 |
Msa0530100 | Msa1206850 | 0.811445 | 6.974913e-51 | -8.615850e-47 |
Msa0530100 | Msa1218580 | 0.804023 | 2.635363e-49 | -8.615850e-47 |
Msa0530100 | Msa1225100 | 0.800310 | 1.530416e-48 | -8.615850e-47 |
Msa0530100 | Msa1231840 | 0.809568 | 1.774742e-50 | -8.615850e-47 |
Msa0530100 | Msa1243870 | 0.801941 | 7.098542e-49 | -8.615850e-47 |
Msa0530100 | Msa1253810 | 0.811939 | 5.446362e-51 | -8.615850e-47 |
Msa0530100 | Msa1258370 | 0.828834 | 7.213985e-55 | -8.615850e-47 |
Msa0530100 | Msa1265590 | 0.802568 | 5.275580e-49 | -8.615850e-47 |
Msa0530100 | Msa1270660 | 0.819190 | 1.322620e-52 | -8.615850e-47 |
Msa0530100 | Msa1272610 | 0.816797 | 4.595206e-52 | -8.615850e-47 |
Msa0530100 | Msa1274560 | 0.804163 | 2.464378e-49 | -8.615850e-47 |
Msa0530100 | Msa1280620 | 0.807533 | 4.824604e-50 | -8.615850e-47 |
Msa0530100 | Msa1293590 | 0.805832 | 1.103408e-49 | -8.615850e-47 |
Msa0530100 | Msa1307180 | 0.808636 | 2.810398e-50 | -8.615850e-47 |
Msa0530100 | Msa1310440 | 0.813769 | 2.164251e-51 | -8.615850e-47 |
Msa0530100 | Msa1312520 | 0.811338 | 7.358399e-51 | -8.615850e-47 |
Msa0530100 | Msa1316360 | 0.819605 | 1.063598e-52 | -8.615850e-47 |
Msa0530100 | Msa1329870 | 0.803423 | 3.510864e-49 | -8.615850e-47 |
Msa0530100 | Msa1346750 | 0.820716 | 5.920473e-53 | -8.615850e-47 |
Msa0530100 | Msa1348560 | 0.800167 | 1.636687e-48 | -8.615850e-47 |
Msa0530100 | Msa1351540 | 0.814142 | 1.790815e-51 | -8.615850e-47 |
Msa0530100 | Msa1355890 | 0.845731 | 3.381361e-59 | -8.615850e-47 |
Msa0530100 | Msa1358670 | 0.822422 | 2.388526e-53 | -8.615850e-47 |
Msa0530100 | Msa1359560 | 0.804283 | 2.327013e-49 | -8.615850e-47 |
Msa0530100 | Msa1364210 | 0.826971 | 2.024160e-54 | -8.615850e-47 |
Msa0530100 | Msa1370620 | 0.802497 | 5.455202e-49 | -8.615850e-47 |
Msa0530100 | Msa1371940 | 0.808347 | 3.238352e-50 | -8.615850e-47 |
Msa0530100 | Msa1375580 | 0.805377 | 1.374515e-49 | -8.615850e-47 |
Msa0530100 | Msa1381480 | 0.846005 | 2.849665e-59 | -8.615850e-47 |
Msa0530100 | Msa1381650 | 0.819540 | 1.100837e-52 | -8.615850e-47 |
Msa0530100 | Msa1382790 | 0.827917 | 1.200603e-54 | -8.615850e-47 |
Msa0530100 | Msa1384870 | 0.805721 | 1.164386e-49 | -8.615850e-47 |
Msa0530100 | Msa1405220 | 0.807037 | 6.146003e-50 | -8.615850e-47 |
Msa0530100 | Msa1415640 | 0.805304 | 1.423990e-49 | -8.615850e-47 |
Msa0530100 | Msa1418280 | 0.800648 | 1.305862e-48 | -8.615850e-47 |
Msa0530100 | Msa1420270 | 0.815156 | 1.068106e-51 | -8.615850e-47 |
Msa0530100 | Msa1435070 | 0.809246 | 2.079944e-50 | -8.615850e-47 |
Msa0530100 | Msa1436600 | 0.807674 | 4.503399e-50 | -8.615850e-47 |
Msa0530100 | Msa1439700 | 0.809938 | 1.477461e-50 | -8.615850e-47 |
Msa0530100 | Msa1443610 | 0.803069 | 4.155587e-49 | -8.615850e-47 |
Msa0530100 | Msa1454950 | 0.811055 | 8.478417e-51 | -8.615850e-47 |
Msa0530100 | Msa1457160 | 0.822325 | 2.516133e-53 | -8.615850e-47 |
Msa0530100 | Msa1462360 | 0.812361 | 4.406780e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0530100 | MtrunA17_Chr4g0002301 | 90.815 | 577 | 10 | 2 | 1 | 534 | 1 | 577 | 0.0 | 1056 |
Msa0530100 | MtrunA17_Chr0c31g0494131 | 71.041 | 442 | 101 | 1 | 118 | 532 | 5 | 446 | 0.0 | 635 |
Msa0530100 | MtrunA17_Chr4g0071731 | 61.485 | 431 | 141 | 3 | 1 | 408 | 1 | 429 | 0.0 | 529 |
Msa0530100 | MtrunA17_Chr2g0286021 | 38.996 | 518 | 227 | 17 | 71 | 503 | 114 | 627 | 4.00e-97 | 307 |
Msa0530100 | MtrunA17_Chr4g0071721 | 63.253 | 166 | 31 | 1 | 397 | 532 | 33 | 198 | 2.74e-63 | 205 |
Msa0530100 | MtrunA17_Chr1g0187981 | 31.849 | 449 | 253 | 10 | 91 | 501 | 46 | 479 | 4.08e-56 | 198 |
Msa0530100 | MtrunA17_Chr4g0059431 | 30.426 | 470 | 255 | 11 | 94 | 505 | 39 | 494 | 1.35e-48 | 177 |
Msa0530100 | MtrunA17_Chr0c31g0494141 | 36.879 | 141 | 64 | 3 | 1 | 118 | 1 | 139 | 6.18e-20 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0530100 | AT1G51590.1 | 73.007 | 552 | 94 | 7 | 1 | 508 | 1 | 541 | 0.0 | 782 |
Msa0530100 | AT3G21160.1 | 69.085 | 579 | 121 | 7 | 1 | 532 | 1 | 568 | 0.0 | 771 |
Msa0530100 | AT1G51590.2 | 80.320 | 437 | 58 | 2 | 100 | 508 | 1 | 437 | 0.0 | 724 |
Msa0530100 | AT3G21160.2 | 69.880 | 415 | 98 | 4 | 1 | 398 | 1 | 405 | 0.0 | 565 |
Msa0530100 | AT1G30000.1 | 39.718 | 496 | 212 | 15 | 92 | 503 | 128 | 620 | 3.36e-95 | 302 |
Msa0530100 | AT1G30000.2 | 39.718 | 496 | 212 | 15 | 92 | 503 | 148 | 640 | 9.58e-95 | 302 |
Msa0530100 | AT5G43710.3 | 31.126 | 453 | 254 | 8 | 91 | 503 | 39 | 473 | 7.71e-56 | 197 |
Msa0530100 | AT5G43710.2 | 31.126 | 453 | 254 | 8 | 91 | 503 | 39 | 473 | 8.51e-56 | 196 |
Msa0530100 | AT5G43710.1 | 30.921 | 456 | 257 | 8 | 91 | 506 | 39 | 476 | 1.39e-55 | 197 |
Msa0530100 | AT1G27520.1 | 31.360 | 456 | 261 | 8 | 91 | 505 | 36 | 480 | 5.94e-54 | 192 |
Find 155 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGAAATGCACTCAAAATT+TGG | 0.175445 | 4_1:+4098529 | None:intergenic |
GGTTCCACAAAATAATATTA+AGG | 0.181740 | 4_1:+4098550 | None:intergenic |
CTTAGTACATACGATCTTTC+AGG | 0.182763 | 4_1:-4102427 | Msa0530100:CDS |
TCTTGATACACTATACATTA+TGG | 0.190941 | 4_1:-4103155 | Msa0530100:CDS |
AATAACCGACTTGCATAATT+TGG | 0.194478 | 4_1:-4104024 | Msa0530100:intron |
ACGGGGAATTTGTTCCATTT+TGG | 0.211193 | 4_1:-4098709 | Msa0530100:three_prime_UTR |
TGCTCCAGGGATGCTTGCTT+TGG | 0.216455 | 4_1:-4100107 | Msa0530100:CDS |
ATGAATACTTGCTTAAAGTT+TGG | 0.236436 | 4_1:-4100647 | Msa0530100:CDS |
CTTCATATCTTGACTAAAAT+AGG | 0.245731 | 4_1:-4098580 | Msa0530100:three_prime_UTR |
TCCTTTCTGCCACCTATTCT+AGG | 0.259317 | 4_1:+4098809 | None:intergenic |
AAAACCTTCTGCTGATACTT+TGG | 0.271291 | 4_1:+4101044 | None:intergenic |
TTTCAAGGGTGAGAGTATTT+TGG | 0.274453 | 4_1:-4101123 | Msa0530100:intron |
GCTTTGGGATCATCTGGTTA+TGG | 0.305745 | 4_1:-4100091 | Msa0530100:CDS |
CTCTAGCTGTAAAACTTTAT+AGG | 0.313818 | 4_1:-4100608 | Msa0530100:intron |
TGAATACTTGCTTAAAGTTT+GGG | 0.318324 | 4_1:-4100646 | Msa0530100:CDS |
GACAAGTTGATAATGTTATA+AGG | 0.323001 | 4_1:+4102328 | None:intergenic |
GTCAATAGCTTTGGAGGTCT+TGG | 0.324765 | 4_1:-4103196 | Msa0530100:CDS |
TTCTCATTTGAGTTCTTAAC+AGG | 0.325798 | 4_1:+4098845 | None:intergenic |
AATTCCCCGTCTTTGAATCT+TGG | 0.329487 | 4_1:+4098722 | None:intergenic |
TGAAGGTTCTGACATCTTAC+AGG | 0.336158 | 4_1:+4098684 | None:intergenic |
TGAGTAGTGGTAGCAGTAAA+TGG | 0.338172 | 4_1:-4105475 | Msa0530100:CDS |
GCTCCAGGGATGCTTGCTTT+GGG | 0.341072 | 4_1:-4100106 | Msa0530100:CDS |
GTTCCACAAAATAATATTAA+GGG | 0.343574 | 4_1:+4098551 | None:intergenic |
TCCCTTCGAGTCAACCTTCC+CGG | 0.344813 | 4_1:+4103606 | None:intergenic |
CTTGATACACTATACATTAT+GGG | 0.345860 | 4_1:-4103154 | Msa0530100:CDS |
ACATCTTACAGGCTCCAAAA+TGG | 0.350692 | 4_1:+4098695 | None:intergenic |
ATCTTGGTATGTCTTGTTGC+CGG | 0.354146 | 4_1:+4099322 | None:intergenic |
AAACCTTCTGCTGATACTTT+GGG | 0.354260 | 4_1:+4101045 | None:intergenic |
TTGGGAAGCAATTGTGAAAC+AGG | 0.354810 | 4_1:-4098661 | Msa0530100:three_prime_UTR |
TTGAATACCCATTCATCTAA+TGG | 0.357605 | 4_1:+4098914 | None:intergenic |
TATAGAATGCACAGATATAT+AGG | 0.370175 | 4_1:+4098486 | None:intergenic |
ATGCTTGCTTTGGGATCATC+TGG | 0.372484 | 4_1:-4100097 | Msa0530100:CDS |
CGCATAGAGTCGGGCTATGT+TGG | 0.374873 | 4_1:-4099260 | Msa0530100:CDS |
TTCCCTTCTCTGGATATCAA+TGG | 0.381049 | 4_1:+4103546 | None:intergenic |
CGGTCATTCCATTAGATGAA+TGG | 0.381669 | 4_1:-4098922 | Msa0530100:CDS |
TCCCTTCTCTGGATATCAAT+GGG | 0.384629 | 4_1:+4103547 | None:intergenic |
TTGAGTCACTCTTCTACCTT+TGG | 0.392975 | 4_1:-4099352 | Msa0530100:CDS |
CAGGTCCACTAAAGAGGTCT+TGG | 0.393953 | 4_1:-4103575 | Msa0530100:CDS |
CATTTGGCGCCATGGGTGAT+AGG | 0.398474 | 4_1:-4100820 | Msa0530100:intron |
TCCTATCACATTTGGCGCCA+TGG | 0.401558 | 4_1:-4100828 | Msa0530100:CDS |
GTAATATAGGAAATAGAAAT+AGG | 0.404305 | 4_1:-4098604 | Msa0530100:three_prime_UTR |
CAGCTGGGTCGCAAACTCTC+TGG | 0.407952 | 4_1:-4102650 | Msa0530100:CDS |
ATAGGAAGTAATCCATCATC+AGG | 0.411882 | 4_1:+4100887 | None:intergenic |
CTACAAATGATGAGTAATAT+AGG | 0.413146 | 4_1:-4098617 | Msa0530100:three_prime_UTR |
GCAACAAGACATACCAAGAT+TGG | 0.418963 | 4_1:-4099319 | Msa0530100:CDS |
CTGCTGATACTTTGGGTCTC+CGG | 0.423512 | 4_1:+4101052 | None:intergenic |
AATAAAACATTCCCTGATGA+TGG | 0.424362 | 4_1:-4100899 | Msa0530100:CDS |
TAAGATGTCAGAACCTTCAT+TGG | 0.424861 | 4_1:-4098680 | Msa0530100:three_prime_UTR |
TCACCACAATCCAGAGTAGT+AGG | 0.425238 | 4_1:-4102457 | Msa0530100:intron |
TTGCTTAAAGTTTGGGTACA+AGG | 0.427453 | 4_1:-4100639 | Msa0530100:CDS |
ACACAGAAGCACACCCTTTG+AGG | 0.428655 | 4_1:-4098892 | Msa0530100:CDS |
AAAAGTGGTGTCAATAGCTT+TGG | 0.429770 | 4_1:-4103205 | Msa0530100:CDS |
TTCTACCTTTGGCGCCTAAC+CGG | 0.433958 | 4_1:-4099341 | Msa0530100:CDS |
GGCTACTCTCCTATCACATT+TGG | 0.436591 | 4_1:-4100836 | Msa0530100:CDS |
ACCATACCTGTAGTTCATCT+TGG | 0.442790 | 4_1:+4103467 | None:intergenic |
GAACTAGCGTGCTTTGCTCC+AGG | 0.446640 | 4_1:-4100121 | Msa0530100:CDS |
ATTATCCAAGACCTCTTTAG+TGG | 0.450428 | 4_1:+4103570 | None:intergenic |
CAACAAGACATACCAAGATT+GGG | 0.450877 | 4_1:-4099318 | Msa0530100:CDS |
TCACAATTGCTTCCCAATGA+AGG | 0.454499 | 4_1:+4098667 | None:intergenic |
GTTTATGTCACTTGCGGAAG+AGG | 0.455285 | 4_1:-4100050 | Msa0530100:intron |
ATATATTCCAACCCCAATCT+TGG | 0.459533 | 4_1:+4099306 | None:intergenic |
AAGAGTGACTCAACTGTCTC+TGG | 0.462962 | 4_1:+4099362 | None:intergenic |
GGTCATTCCATTAGATGAAT+GGG | 0.464425 | 4_1:-4098921 | Msa0530100:CDS |
AATCCTCATAGTGGAACAAC+AGG | 0.466061 | 4_1:-4100857 | Msa0530100:CDS |
TAATCTATCTGCAATATCTC+TGG | 0.470494 | 4_1:+4102381 | None:intergenic |
AAGGTCTGTTAAGTTTGATT+CGG | 0.471042 | 4_1:-4100313 | Msa0530100:CDS |
GATCCCAAAGCAAGCATCCC+TGG | 0.472500 | 4_1:+4100103 | None:intergenic |
CAAGGACGTGCACACAATCC+TGG | 0.473872 | 4_1:-4102304 | Msa0530100:CDS |
GCACACAATCCTGGATGGAC+CGG | 0.474244 | 4_1:-4102295 | Msa0530100:CDS |
GGTATGTCTTGTTGCCGGTT+AGG | 0.474868 | 4_1:+4099327 | None:intergenic |
ACTCAACTGTCTCTGGCCTC+AGG | 0.476268 | 4_1:+4099369 | None:intergenic |
GGCAGAAAGGAAGGTCGGTC+GGG | 0.477322 | 4_1:-4098797 | Msa0530100:CDS |
AAAGTGCATGATGGCACTGC+CGG | 0.479791 | 4_1:-4103625 | Msa0530100:CDS |
TAGCCTGTTGTTCCACTATG+AGG | 0.480434 | 4_1:+4100854 | None:intergenic |
CCTATCACATTTGGCGCCAT+GGG | 0.481889 | 4_1:-4100827 | Msa0530100:CDS |
GGACGCTTCAAGTAATAAGC+TGG | 0.482423 | 4_1:+4105440 | None:intergenic |
ATCTATATCAATCCTCATAG+TGG | 0.483288 | 4_1:-4100866 | Msa0530100:CDS |
CTATAGAAGACAGATACTAT+AGG | 0.490465 | 4_1:-4098468 | Msa0530100:three_prime_UTR |
AGTGGTGTCAATAGCTTTGG+AGG | 0.491088 | 4_1:-4103202 | Msa0530100:CDS |
ATAAACTTCTGCGAATCATC+AGG | 0.492014 | 4_1:+4100067 | None:intergenic |
CTATGAGGATTGATATAGAT+AGG | 0.493737 | 4_1:+4100869 | None:intergenic |
CCCATGGCGCCAAATGTGAT+AGG | 0.494378 | 4_1:+4100827 | None:intergenic |
TTCAACCAAGATTCAAAGAC+GGG | 0.500517 | 4_1:-4098727 | Msa0530100:three_prime_UTR |
CAGATAGATTACTGCCTGCA+TGG | 0.503951 | 4_1:-4102369 | Msa0530100:CDS |
CCTGCATGGAACACACCTAC+AGG | 0.506080 | 4_1:-4102355 | Msa0530100:CDS |
CATATATAAGTAAAGGAAGA+TGG | 0.506462 | 4_1:+4100281 | None:intergenic |
CCTGTAGGTGTGTTCCATGC+AGG | 0.506768 | 4_1:+4102355 | None:intergenic |
AAGAAGCAATGCTTCATGCT+TGG | 0.508050 | 4_1:-4103516 | Msa0530100:CDS |
TTCTTACGAGAAATATGCGT+GGG | 0.509050 | 4_1:-4103491 | Msa0530100:CDS |
AAAAGCATAGCAAGACGCTT+AGG | 0.510186 | 4_1:+4105419 | None:intergenic |
AAGAACTCTCGCATAGAGTC+GGG | 0.510675 | 4_1:-4099269 | Msa0530100:CDS |
GTCGGGCTATGTTGGACTAA+AGG | 0.512086 | 4_1:-4099252 | Msa0530100:CDS |
TCTAATGGAATGACCGAAGA+AGG | 0.512329 | 4_1:+4098929 | None:intergenic |
AAAGATCGTATGTACTAAGA+AGG | 0.512574 | 4_1:+4102431 | None:intergenic |
TCCTAGAATAGGTGGCAGAA+AGG | 0.513208 | 4_1:-4098810 | Msa0530100:CDS |
CACACAATCCTGGATGGACC+GGG | 0.515187 | 4_1:-4102294 | Msa0530100:CDS |
ATCTCTAAAACAGAGATATG+TGG | 0.515657 | 4_1:-4100349 | Msa0530100:intron |
CTTCTCACATATATAAGTAA+AGG | 0.516300 | 4_1:+4100274 | None:intergenic |
TGCTTAAAGTTTGGGTACAA+GGG | 0.520166 | 4_1:-4100638 | Msa0530100:CDS |
TGGCAGAAAGGAAGGTCGGT+CGG | 0.523530 | 4_1:-4098798 | Msa0530100:CDS |
AACTAACAGGTCCACTAAAG+AGG | 0.528572 | 4_1:-4103581 | Msa0530100:CDS |
TCTCTAAAACAGAGATATGT+GGG | 0.531080 | 4_1:-4100348 | Msa0530100:intron |
ATCTTGACTAAAATAGGTTG+TGG | 0.532183 | 4_1:-4098574 | Msa0530100:three_prime_UTR |
TTCCTTGTCACAATCCTCAA+AGG | 0.532807 | 4_1:+4098878 | None:intergenic |
AAACTTACCCCGGTCCATCC+AGG | 0.536972 | 4_1:+4102286 | None:intergenic |
TGCCGGGAAGGTTGACTCGA+AGG | 0.537750 | 4_1:-4103608 | Msa0530100:CDS |
TCTTTGAATCTTGGTTGAAG+TGG | 0.543277 | 4_1:+4098731 | None:intergenic |
TCCTTGTCACAATCCTCAAA+GGG | 0.549191 | 4_1:+4098879 | None:intergenic |
GGGAGTAGATCAGTGAGTAG+TGG | 0.550997 | 4_1:-4105488 | Msa0530100:CDS |
AAGTGCATGATGGCACTGCC+GGG | 0.556936 | 4_1:-4103624 | Msa0530100:CDS |
AAGATGTCAGAACCTTCATT+GGG | 0.557909 | 4_1:-4098679 | Msa0530100:three_prime_UTR |
CTCACTTCCCAGGTTAACAC+TGG | 0.559131 | 4_1:-4099022 | Msa0530100:intron |
AACTAGCGTGCTTTGCTCCA+GGG | 0.559285 | 4_1:-4100120 | Msa0530100:CDS |
AGAATAGGTGGCAGAAAGGA+AGG | 0.566046 | 4_1:-4098806 | Msa0530100:CDS |
AGACATACCAAGATTGGGGT+TGG | 0.568978 | 4_1:-4099313 | Msa0530100:CDS |
ACATGAGTGTGGGTACATCA+TGG | 0.569922 | 4_1:-4099397 | Msa0530100:CDS |
TCCCATTGATATCCAGAGAA+GGG | 0.570283 | 4_1:-4103548 | Msa0530100:CDS |
TGTTGCCGGTTAGGCGCCAA+AGG | 0.570883 | 4_1:+4099336 | None:intergenic |
CAATATCTCTGGCTTTGTCA+AGG | 0.571901 | 4_1:+4102392 | None:intergenic |
GAAGAACTCTCGCATAGAGT+CGG | 0.574661 | 4_1:-4099270 | Msa0530100:CDS |
GCCGGGAAGGTTGACTCGAA+GGG | 0.576993 | 4_1:-4103607 | Msa0530100:CDS |
GTGGGGCCAAGATGAACTAC+AGG | 0.591162 | 4_1:-4103473 | Msa0530100:intron |
ATCCCATTGATATCCAGAGA+AGG | 0.596496 | 4_1:-4103549 | Msa0530100:CDS |
ATTGCTCTATCTCAAAGGAC+CGG | 0.598269 | 4_1:-4101071 | Msa0530100:CDS |
ATACATGATTTATGTAACTG+AGG | 0.598804 | 4_1:-4098509 | Msa0530100:three_prime_UTR |
TCTTACCAAATTATGCAAGT+CGG | 0.598941 | 4_1:+4104019 | None:intergenic |
ATCTTTCGAAAATGGCGAGA+GGG | 0.599552 | 4_1:-4105508 | None:intergenic |
AGTTCATTGCTCTATCTCAA+AGG | 0.605447 | 4_1:-4101076 | Msa0530100:CDS |
GCAGAAGTTTATGTCACTTG+CGG | 0.606147 | 4_1:-4100056 | Msa0530100:CDS |
AGTGGTTCATCAACTAGTCA+TGG | 0.606457 | 4_1:+4098749 | None:intergenic |
ATGTTATAAGGAATTCCTGT+AGG | 0.608699 | 4_1:+4102340 | None:intergenic |
TCATGGTAGAGAAGCATGAA+CGG | 0.611540 | 4_1:+4098766 | None:intergenic |
ACTTATATATGTGAGAAGAG+TGG | 0.613725 | 4_1:-4100269 | Msa0530100:CDS |
GACGTGCACACAATCCTGGA+TGG | 0.617017 | 4_1:-4102300 | Msa0530100:CDS |
ATGTGGGAGAAATCAATGAA+AGG | 0.620443 | 4_1:-4100332 | Msa0530100:CDS |
AACATTATCAACTTGTCACA+AGG | 0.621612 | 4_1:-4102322 | Msa0530100:CDS |
GCATGATGGCACTGCCGGGA+AGG | 0.623896 | 4_1:-4103620 | Msa0530100:CDS |
GAGTCAAATAAAGTGCATGA+TGG | 0.624057 | 4_1:-4103634 | Msa0530100:CDS |
AGACCCAAAGTATCAGCAGA+AGG | 0.635744 | 4_1:-4101048 | Msa0530100:intron |
CTTCAACCAAGATTCAAAGA+CGG | 0.636333 | 4_1:-4098728 | Msa0530100:three_prime_UTR |
ACCCTTTGAGGATTGTGACA+AGG | 0.641871 | 4_1:-4098880 | Msa0530100:CDS |
TAGGAAGTAATCCATCATCA+GGG | 0.641994 | 4_1:+4100888 | None:intergenic |
GATGCAAAGTTTCTTTCTCG+CGG | 0.643973 | 4_1:-4098984 | Msa0530100:CDS |
GTGTTAATACCTATCACCCA+TGG | 0.646060 | 4_1:+4100811 | None:intergenic |
TAGGTGGCAGAAAGGAAGGT+CGG | 0.649075 | 4_1:-4098802 | Msa0530100:CDS |
AACAAGACATACCAAGATTG+GGG | 0.651954 | 4_1:-4099317 | Msa0530100:CDS |
TATATATGTGAGAAGAGTGG+AGG | 0.655638 | 4_1:-4100266 | Msa0530100:CDS |
GATCTTTCGAAAATGGCGAG+AGG | 0.677971 | 4_1:-4105509 | None:intergenic |
GATTGTGACAAGGAACGAAG+CGG | 0.686601 | 4_1:-4098870 | Msa0530100:CDS |
ACACAATCCTGGATGGACCG+GGG | 0.694750 | 4_1:-4102293 | Msa0530100:intron |
CCACAATCCAGAGTAGTAGG+TGG | 0.698751 | 4_1:-4102454 | Msa0530100:intron |
GTTCTTACGAGAAATATGCG+TGG | 0.702505 | 4_1:-4103492 | Msa0530100:CDS |
TCTTACGAGAAATATGCGTG+GGG | 0.740661 | 4_1:-4103490 | Msa0530100:CDS |
GTACATCATGGAACATCCTG+AGG | 0.744218 | 4_1:-4099385 | Msa0530100:CDS |
TCAACCAAGATTCAAAGACG+GGG | 0.745743 | 4_1:-4098726 | Msa0530100:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAAAAAAGAACATTAAAA+CGG | + | chr4_1:4099297-4099316 | None:intergenic | 10.0% |
!!! | GAAATTATTTTTGATTTTTT+TGG | - | chr4_1:4099811-4099830 | Msa0530100:intron | 10.0% |
!!! | ATTTTTTATTATTTTTCCTT+TGG | - | chr4_1:4100253-4100272 | Msa0530100:CDS | 10.0% |
!!! | TTTTTTATTATTTTTCCTTT+GGG | - | chr4_1:4100254-4100273 | Msa0530100:CDS | 10.0% |
!!! | GTTTATTATACTTTTTTAAT+TGG | + | chr4_1:4101403-4101422 | None:intergenic | 10.0% |
!! | ATTAGAATAAAAGTTAAAAT+TGG | + | chr4_1:4102719-4102738 | None:intergenic | 10.0% |
!!! | CATATATTCATTTTTTTTTA+CGG | - | chr4_1:4102933-4102952 | Msa0530100:intron | 10.0% |
!!! | ATATATTCATTTTTTTTTAC+GGG | - | chr4_1:4102934-4102953 | Msa0530100:intron | 10.0% |
!!! | TAACTGTTTTTATTAAATAC+AGG | - | chr4_1:4099870-4099889 | Msa0530100:intron | 15.0% |
!!! | TTCTTTTCATTGTTATTTAT+TGG | + | chr4_1:4100032-4100051 | None:intergenic | 15.0% |
!! | AATAAATAACAATGAAAAGA+AGG | - | chr4_1:4100031-4100050 | Msa0530100:intron | 15.0% |
!!! | TTTTTATTATTTTTCCTTTG+GGG | - | chr4_1:4100255-4100274 | Msa0530100:CDS | 15.0% |
!!! | GTTGTTTCTAATATTATATT+TGG | - | chr4_1:4100932-4100951 | Msa0530100:intron | 15.0% |
!!! | TAATGTAACTTTTATGAATT+AGG | + | chr4_1:4101170-4101189 | None:intergenic | 15.0% |
!!! | TTATACTTTTTTAATTGGAA+GGG | + | chr4_1:4101398-4101417 | None:intergenic | 15.0% |
!!! | ATTATACTTTTTTAATTGGA+AGG | + | chr4_1:4101399-4101418 | None:intergenic | 15.0% |
!! | CGTAAAAAAAAATGAATATA+TGG | + | chr4_1:4102935-4102954 | None:intergenic | 15.0% |
!!! | TATATTCATTTTTTTTTACG+GGG | - | chr4_1:4102935-4102954 | Msa0530100:intron | 15.0% |
!!! | TTTTAGAGATTAAAAAGAAA+TGG | + | chr4_1:4103583-4103602 | None:intergenic | 15.0% |
!! | TTTATTCTCTGATATACTAT+CGG | - | chr4_1:4098762-4098781 | Msa0530100:three_prime_UTR | 20.0% |
!! | TAGTAATATCAAATCAGTAT+AGG | + | chr4_1:4098901-4098920 | None:intergenic | 20.0% |
!!! | ATACTGATTTGATATTACTA+AGG | - | chr4_1:4098901-4098920 | Msa0530100:CDS | 20.0% |
!! | CTTGTACAATAGATTAAAAA+TGG | + | chr4_1:4099609-4099628 | None:intergenic | 20.0% |
!!! | AAGTGTAACTTTATTTTTAG+AGG | - | chr4_1:4099782-4099801 | Msa0530100:intron | 20.0% |
!!! | AGTGTAACTTTATTTTTAGA+GGG | - | chr4_1:4099783-4099802 | Msa0530100:intron | 20.0% |
!! | TAATAAAAACAGTTATCTAC+TGG | + | chr4_1:4099865-4099884 | None:intergenic | 20.0% |
!!! | AATGATATGGAATGTTTTTA+AGG | + | chr4_1:4100001-4100020 | None:intergenic | 20.0% |
!! | ATTGGAAAAATGAAATGATA+TGG | + | chr4_1:4100014-4100033 | None:intergenic | 20.0% |
!!! | TTTTATTATTTTTCCTTTGG+GGG | - | chr4_1:4100256-4100275 | Msa0530100:CDS | 20.0% |
!!! | CAATAAAACAAAAAAGTACA+AGG | + | chr4_1:4100524-4100543 | None:intergenic | 20.0% |
!! | TCTAATATTATATTTGGCAA+AGG | - | chr4_1:4100938-4100957 | Msa0530100:intron | 20.0% |
!! | TATAATAAACTTAACTTACG+TGG | - | chr4_1:4101413-4101432 | Msa0530100:intron | 20.0% |
!!! | AGTACTATATTTTGTTCAAA+AGG | + | chr4_1:4101893-4101912 | None:intergenic | 20.0% |
!!! | TTGAATGTGTTTTTAATAGA+AGG | - | chr4_1:4101950-4101969 | Msa0530100:intron | 20.0% |
!!! | TTTTTGTTTTTATTGACTAC+TGG | + | chr4_1:4101996-4102015 | None:intergenic | 20.0% |
!! | AAAAGATAATCATGAAAACA+TGG | + | chr4_1:4102084-4102103 | None:intergenic | 20.0% |
!!! | TTTTCAAATAAACGTAGAAT+AGG | - | chr4_1:4103509-4103528 | Msa0530100:CDS | 20.0% |
!! | TCAATGGTAAATATTAAATG+CGG | + | chr4_1:4103748-4103767 | None:intergenic | 20.0% |
!! | AATATTTACCATTGATGTAT+TGG | - | chr4_1:4103753-4103772 | Msa0530100:intron | 20.0% |
!!! | TTATCTTTTGCTATAGAAAT+AGG | + | chr4_1:4104083-4104102 | None:intergenic | 20.0% |
!! | AAATTGTTTCCATTTATAAG+CGG | - | chr4_1:4104112-4104131 | Msa0530100:intron | 20.0% |
!!! | TTACTTTTTCTTTTTTTGAC+AGG | - | chr4_1:4104442-4104461 | Msa0530100:intron | 20.0% |
!!! | AAATTTACTTCTGCATTTTA+AGG | - | chr4_1:4104522-4104541 | Msa0530100:intron | 20.0% |
!! | CATTATTAAATGTGAAATTG+AGG | + | chr4_1:4104727-4104746 | None:intergenic | 20.0% |
!! | GTAATATAGGAAATAGAAAT+AGG | - | chr4_1:4105338-4105357 | Msa0530100:intron | 20.0% |
!! | GTTCCACAAAATAATATTAA+GGG | + | chr4_1:4105394-4105413 | None:intergenic | 20.0% |
!! | TTTCGGTTTCTTTTATTGTT+TGG | - | chr4_1:4098557-4098576 | Msa0530100:three_prime_UTR | 25.0% |
!! | TTCGGTTTCTTTTATTGTTT+GGG | - | chr4_1:4098558-4098577 | Msa0530100:three_prime_UTR | 25.0% |
!!! | TTTTGTTTCAATTCTGTGTT+TGG | - | chr4_1:4098645-4098664 | Msa0530100:three_prime_UTR | 25.0% |
! | ATCATATAGGATTTGTAAGA+AGG | - | chr4_1:4098826-4098845 | Msa0530100:CDS | 25.0% |
! | TTTGATATTACTAAGGAGTA+AGG | - | chr4_1:4098908-4098927 | Msa0530100:CDS | 25.0% |
!! | TAGGTTTATGATTTTTCACT+TGG | - | chr4_1:4098976-4098995 | Msa0530100:CDS | 25.0% |
!! | AGGTTTATGATTTTTCACTT+GGG | - | chr4_1:4098977-4098996 | Msa0530100:CDS | 25.0% |
! | ATTGATATTGTTCTGTGATA+AGG | - | chr4_1:4099065-4099084 | Msa0530100:intron | 25.0% |
! | TTACATTCAATTATTACCGA+TGG | + | chr4_1:4099385-4099404 | None:intergenic | 25.0% |
!! | TAATATAGCAGTGATACTTT+TGG | - | chr4_1:4099511-4099530 | Msa0530100:intron | 25.0% |
! | GTATTCTATAACTACCAATT+TGG | + | chr4_1:4099678-4099697 | None:intergenic | 25.0% |
! | GTAGTTATAGAATACTACAA+CGG | - | chr4_1:4099683-4099702 | Msa0530100:intron | 25.0% |
! | AAACTTTGTAGCATATATTG+TGG | - | chr4_1:4099726-4099745 | Msa0530100:intron | 25.0% |
! | AACTTTGTAGCATATATTGT+GGG | - | chr4_1:4099727-4099746 | Msa0530100:intron | 25.0% |
! | TTTATTGCATGATGATCTAA+TGG | - | chr4_1:4100537-4100556 | Msa0530100:intron | 25.0% |
! | GAATGGTACATGATATAAAT+TGG | - | chr4_1:4100620-4100639 | Msa0530100:CDS | 25.0% |
! | TCTTGATACACTATACATTA+TGG | - | chr4_1:4100787-4100806 | Msa0530100:intron | 25.0% |
! | CTTGATACACTATACATTAT+GGG | - | chr4_1:4100788-4100807 | Msa0530100:intron | 25.0% |
! | ATGATTCTAAATGAGTATAG+AGG | + | chr4_1:4100903-4100922 | None:intergenic | 25.0% |
!! | ATCTAGAACAGCAATAAAAT+TGG | + | chr4_1:4101023-4101042 | None:intergenic | 25.0% |
!!! | GTTATAGTGTTTAACTTGTA+TGG | - | chr4_1:4101055-4101074 | Msa0530100:CDS | 25.0% |
!!! | ACAAGTTTTGTTTTTTGACA+AGG | + | chr4_1:4101085-4101104 | None:intergenic | 25.0% |
! | GTCAAAAAACAAAACTTGTA+TGG | - | chr4_1:4101086-4101105 | Msa0530100:CDS | 25.0% |
! | AAATGTAATAAAGCCTAACT+AGG | + | chr4_1:4101246-4101265 | None:intergenic | 25.0% |
!! | AACCATAAGGTTACTTTATA+AGG | - | chr4_1:4101352-4101371 | Msa0530100:intron | 25.0% |
! | AACCTTATAAAGTAACCTTA+TGG | + | chr4_1:4101357-4101376 | None:intergenic | 25.0% |
!!! | GACAAGTTGATAATGTTATA+AGG | + | chr4_1:4101617-4101636 | None:intergenic | 25.0% |
! | TTGTAGTTAACTTAACATTG+AGG | + | chr4_1:4101754-4101773 | None:intergenic | 25.0% |
!! | TTTCATGATTATCTTTTGCT+TGG | - | chr4_1:4102087-4102106 | Msa0530100:intron | 25.0% |
! | CATTTCCATATTTGTATTAG+AGG | - | chr4_1:4102223-4102242 | Msa0530100:intron | 25.0% |
!!! | TTTTTGCCTTCATTTTTCAA+GGG | - | chr4_1:4102805-4102824 | Msa0530100:intron | 25.0% |
! | CATCTTATTCTGTGTTAATT+TGG | - | chr4_1:4103239-4103258 | Msa0530100:intron | 25.0% |
! | GTATTCATAAAAACTGCAAT+TGG | + | chr4_1:4103283-4103302 | None:intergenic | 25.0% |
! | ATGAATACTTGCTTAAAGTT+TGG | - | chr4_1:4103295-4103314 | Msa0530100:intron | 25.0% |
! | TGAATACTTGCTTAAAGTTT+GGG | - | chr4_1:4103296-4103315 | Msa0530100:intron | 25.0% |
! | TGTATAAAACATGATGAAGT+AGG | + | chr4_1:4103376-4103395 | None:intergenic | 25.0% |
! | ATAATTCTTTCATTGATCCA+AGG | + | chr4_1:4103441-4103460 | None:intergenic | 25.0% |
! | CATATATAAGTAAAGGAAGA+TGG | + | chr4_1:4103664-4103683 | None:intergenic | 25.0% |
! | CTTCTCACATATATAAGTAA+AGG | + | chr4_1:4103671-4103690 | None:intergenic | 25.0% |
!! | TTAAGTTGTTTATCCAAACA+TGG | + | chr4_1:4104004-4104023 | None:intergenic | 25.0% |
! | TTATGAAAACCGCTTATAAA+TGG | + | chr4_1:4104124-4104143 | None:intergenic | 25.0% |
! | AAATACATGTAGAGTAAGTT+TGG | + | chr4_1:4104274-4104293 | None:intergenic | 25.0% |
!! | AGAACTATTTCTTTCATTCT+GGG | - | chr4_1:4104411-4104430 | Msa0530100:intron | 25.0% |
!!! | TTTTTCTTTTTTTGACAGGA+AGG | - | chr4_1:4104446-4104465 | Msa0530100:intron | 25.0% |
! | GATGCACATAGTATTAATTT+GGG | + | chr4_1:4104867-4104886 | None:intergenic | 25.0% |
! | TGATGCACATAGTATTAATT+TGG | + | chr4_1:4104868-4104887 | None:intergenic | 25.0% |
!! | CAAAAATCTTTTCCTAGAAT+AGG | - | chr4_1:4105121-4105140 | Msa0530100:intron | 25.0% |
! | CTACAAATGATGAGTAATAT+AGG | - | chr4_1:4105325-4105344 | Msa0530100:intron | 25.0% |
! | CTTCATATCTTGACTAAAAT+AGG | - | chr4_1:4105362-4105381 | Msa0530100:intron | 25.0% |
! | GGTTCCACAAAATAATATTA+AGG | + | chr4_1:4105395-4105414 | None:intergenic | 25.0% |
! | TATGAAATGCACTCAAAATT+TGG | + | chr4_1:4105416-4105435 | None:intergenic | 25.0% |
! | ATACATGATTTATGTAACTG+AGG | - | chr4_1:4105433-4105452 | Msa0530100:CDS | 25.0% |
! | TATAGAATGCACAGATATAT+AGG | + | chr4_1:4105459-4105478 | None:intergenic | 25.0% |
CAAATGAAGAAATACATACC+TGG | + | chr4_1:4098609-4098628 | None:intergenic | 30.0% | |
CTAGTGTTCATAGATCATAT+AGG | - | chr4_1:4098813-4098832 | Msa0530100:CDS | 30.0% | |
ATAGGATTTGTAAGAAGGAA+AGG | - | chr4_1:4098831-4098850 | Msa0530100:CDS | 30.0% | |
AAACTAAGAGCTAATCCAAA+TGG | + | chr4_1:4098935-4098954 | None:intergenic | 30.0% | |
!! | TTGGATTAGCTCTTAGTTTA+TGG | - | chr4_1:4098936-4098955 | Msa0530100:CDS | 30.0% |
!! | TGGATTAGCTCTTAGTTTAT+GGG | - | chr4_1:4098937-4098956 | Msa0530100:CDS | 30.0% |
! | GGTTTATGATTTTTCACTTG+GGG | - | chr4_1:4098978-4098997 | Msa0530100:CDS | 30.0% |
TTGTTAAATAGAGGCTATGA+TGG | - | chr4_1:4099007-4099026 | Msa0530100:CDS | 30.0% | |
TACAAGATAATGAGTAGTTG+TGG | - | chr4_1:4099623-4099642 | Msa0530100:intron | 30.0% | |
TAACTACCAATTTGGTTGTT+TGG | + | chr4_1:4099670-4099689 | None:intergenic | 30.0% | |
!! | TTTTTGGCACTTGAATAACT+TGG | - | chr4_1:4099827-4099846 | Msa0530100:intron | 30.0% |
!! | AATAACCGACTTGCATAATT+TGG | - | chr4_1:4099918-4099937 | Msa0530100:intron | 30.0% |
TCTTACCAAATTATGCAAGT+CGG | + | chr4_1:4099926-4099945 | None:intergenic | 30.0% | |
AATGAAAAGAAGGAATGAGA+TGG | - | chr4_1:4100041-4100060 | Msa0530100:intron | 30.0% | |
! | TTTTCAATCAGTACGAAAGT+AGG | + | chr4_1:4100098-4100117 | None:intergenic | 30.0% |
! | TAATTTTGTGCCAGATTGAT+TGG | + | chr4_1:4100144-4100163 | None:intergenic | 30.0% |
ACTGATTGTATGTTCTTGAA+TGG | - | chr4_1:4100603-4100622 | Msa0530100:intron | 30.0% | |
AGCAAAAAACAATAACAACC+AGG | + | chr4_1:4100876-4100895 | None:intergenic | 30.0% | |
ATTCTAAATGAGTATAGAGG+TGG | + | chr4_1:4100900-4100919 | None:intergenic | 30.0% | |
! | TGTTCTAGATGAACATTTCA+TGG | - | chr4_1:4101033-4101052 | Msa0530100:intron | 30.0% |
GCAGCAATAAAGAGTTAAAT+AGG | + | chr4_1:4101140-4101159 | None:intergenic | 30.0% | |
!! | AAACTCTCTGGATTTTAACA+AGG | - | chr4_1:4101304-4101323 | Msa0530100:intron | 30.0% |
AAAGATCGTATGTACTAAGA+AGG | + | chr4_1:4101514-4101533 | None:intergenic | 30.0% | |
TAATCTATCTGCAATATCTC+TGG | + | chr4_1:4101564-4101583 | None:intergenic | 30.0% | |
ATGTTATAAGGAATTCCTGT+AGG | + | chr4_1:4101605-4101624 | None:intergenic | 30.0% | |
AACATTATCAACTTGTCACA+AGG | - | chr4_1:4101620-4101639 | Msa0530100:intron | 30.0% | |
ATATTGCTTTCATGTTCCAT+AGG | - | chr4_1:4101728-4101747 | Msa0530100:intron | 30.0% | |
GACACAAAAGTTGTAAACAA+TGG | + | chr4_1:4101778-4101797 | None:intergenic | 30.0% | |
! | TACAACTTTTGTGTCCATAA+AGG | - | chr4_1:4101783-4101802 | Msa0530100:intron | 30.0% |
!! | AAGCTTTAAGGTTAAGATCA+AGG | + | chr4_1:4101830-4101849 | None:intergenic | 30.0% |
TTGATCTTAACCTTAAAGCT+TGG | - | chr4_1:4101829-4101848 | Msa0530100:intron | 30.0% | |
!!! | TTGTTTTTATTGACTACTGG+AGG | + | chr4_1:4101993-4102012 | None:intergenic | 30.0% |
TAGACATGAAAAAACAATGC+AGG | - | chr4_1:4102130-4102149 | Msa0530100:intron | 30.0% | |
AGACATGAAAAAACAATGCA+GGG | - | chr4_1:4102131-4102150 | Msa0530100:intron | 30.0% | |
TGATCAATACTTAGCAAGAA+AGG | + | chr4_1:4102158-4102177 | None:intergenic | 30.0% | |
CTTGAGAAGAGTTTATAAAG+AGG | - | chr4_1:4102391-4102410 | Msa0530100:CDS | 30.0% | |
CTTGAGAAGAGTTTATAAAG+AGG | - | chr4_1:4102391-4102410 | Msa0530100:CDS | 30.0% | |
TTAATCATGTCACGAAAAAC+GGG | + | chr4_1:4102696-4102715 | None:intergenic | 30.0% | |
GTTAATCATGTCACGAAAAA+CGG | + | chr4_1:4102697-4102716 | None:intergenic | 30.0% | |
! | TAATTTTGTATTCCTGACTC+TGG | - | chr4_1:4102735-4102754 | Msa0530100:intron | 30.0% |
CTTGAAAAATGAAGGCAAAA+AGG | + | chr4_1:4102806-4102825 | None:intergenic | 30.0% | |
!! | CTTTTTGCCTTCATTTTTCA+AGG | - | chr4_1:4102804-4102823 | Msa0530100:intron | 30.0% |
!!! | TTCATTTTTTTTTACGGGGA+AGG | - | chr4_1:4102939-4102958 | Msa0530100:intron | 30.0% |
!!! | TCATTTTTTTTTACGGGGAA+GGG | - | chr4_1:4102940-4102959 | Msa0530100:intron | 30.0% |
AATAAAACATTCCCTGATGA+TGG | - | chr4_1:4103043-4103062 | Msa0530100:intron | 30.0% | |
CTATGAGGATTGATATAGAT+AGG | + | chr4_1:4103076-4103095 | None:intergenic | 30.0% | |
ATCTATATCAATCCTCATAG+TGG | - | chr4_1:4103076-4103095 | Msa0530100:intron | 30.0% | |
! | GCTTTTATCGTGTAAAAAGA+TGG | + | chr4_1:4103167-4103186 | None:intergenic | 30.0% |
TTCTTTAGTTAGTACTGTCT+GGG | - | chr4_1:4103199-4103218 | Msa0530100:CDS | 30.0% | |
CTCTAGCTGTAAAACTTTAT+AGG | - | chr4_1:4103334-4103353 | Msa0530100:intron | 30.0% | |
ATAAAACATGATGAAGTAGG+TGG | + | chr4_1:4103373-4103392 | None:intergenic | 30.0% | |
TCATTTGAATGATAGTTCCT+TGG | - | chr4_1:4103421-4103440 | Msa0530100:intron | 30.0% | |
!! | ATCTCTAAAACAGAGATATG+TGG | - | chr4_1:4103593-4103612 | Msa0530100:CDS | 30.0% |
!! | TCTCTAAAACAGAGATATGT+GGG | - | chr4_1:4103594-4103613 | Msa0530100:CDS | 30.0% |
AAGGTCTGTTAAGTTTGATT+CGG | - | chr4_1:4103629-4103648 | Msa0530100:CDS | 30.0% | |
ACTTATATATGTGAGAAGAG+TGG | - | chr4_1:4103673-4103692 | Msa0530100:intron | 30.0% | |
ACTTTCATCCAATACATCAA+TGG | + | chr4_1:4103764-4103783 | None:intergenic | 30.0% | |
! | CATGGCTTTTGTATATTGAT+AGG | + | chr4_1:4103986-4104005 | None:intergenic | 30.0% |
CAATATACAAAAGCCATGTT+TGG | - | chr4_1:4103988-4104007 | Msa0530100:intron | 30.0% | |
!! | CTAACACAAAAGCATTTACA+TGG | + | chr4_1:4104053-4104072 | None:intergenic | 30.0% |
ACTTAATTGAACTAATCGAC+TGG | + | chr4_1:4104247-4104266 | None:intergenic | 30.0% | |
GTATGACAACTTCATAAAGA+CGG | + | chr4_1:4104316-4104335 | None:intergenic | 30.0% | |
!! | CTAATTTTGTTGGAGTTGAT+TGG | + | chr4_1:4104385-4104404 | None:intergenic | 30.0% |
! | GAGAACTATTTCTTTCATTC+TGG | - | chr4_1:4104410-4104429 | Msa0530100:intron | 30.0% |
! | GAACTATTTCTTTCATTCTG+GGG | - | chr4_1:4104412-4104431 | Msa0530100:intron | 30.0% |
!!! | AGACTTTTTTTTTGCCAAAG+TGG | + | chr4_1:4104803-4104822 | None:intergenic | 30.0% |
TTGAATACCCATTCATCTAA+TGG | + | chr4_1:4105031-4105050 | None:intergenic | 30.0% | |
! | TTCTCATTTGAGTTCTTAAC+AGG | + | chr4_1:4105100-4105119 | None:intergenic | 30.0% |
! | AAATCTTTTCCTAGAATAGG+TGG | - | chr4_1:4105124-4105143 | Msa0530100:intron | 30.0% |
ATCTTGACTAAAATAGGTTG+TGG | - | chr4_1:4105368-4105387 | Msa0530100:intron | 30.0% | |
!! | TGGCCCTTAATATTATTTTG+TGG | - | chr4_1:4105388-4105407 | Msa0530100:intron | 30.0% |
CTATAGAAGACAGATACTAT+AGG | - | chr4_1:4105474-4105493 | Msa0530100:CDS | 30.0% | |
! | GCTTTTCATCGTTTTCGTTT+CGG | - | chr4_1:4098540-4098559 | Msa0530100:three_prime_UTR | 35.0% |
AACTTTAGTCAGAGAATACC+AGG | - | chr4_1:4098588-4098607 | Msa0530100:three_prime_UTR | 35.0% | |
TTATCAACACCTCTGATCAA+AGG | - | chr4_1:4098682-4098701 | Msa0530100:three_prime_UTR | 35.0% | |
GGGTGCTTCTTAGATAAAAT+AGG | - | chr4_1:4098957-4098976 | Msa0530100:CDS | 35.0% | |
! | GGGATAGTGTTGTTAAATAG+AGG | - | chr4_1:4098998-4099017 | Msa0530100:CDS | 35.0% |
AGTTATTGCCTATGAAGCAT+TGG | - | chr4_1:4099316-4099335 | Msa0530100:CDS | 35.0% | |
TGATATTGACATGTGACCAT+CGG | - | chr4_1:4099366-4099385 | Msa0530100:CDS | 35.0% | |
!! | TCTCTTTCAGAAGTACTTCT+TGG | - | chr4_1:4099482-4099501 | Msa0530100:intron | 35.0% |
!! | CTCTTTCAGAAGTACTTCTT+GGG | - | chr4_1:4099483-4099502 | Msa0530100:intron | 35.0% |
! | TATAGCAGTGATACTTTTGG+AGG | - | chr4_1:4099514-4099533 | Msa0530100:intron | 35.0% |
CGTAAATGCACAATTGAGTA+TGG | - | chr4_1:4099542-4099561 | Msa0530100:intron | 35.0% | |
GTTATAGAATACTACAACGG+CGG | - | chr4_1:4099686-4099705 | Msa0530100:intron | 35.0% | |
TTATAGAATACTACAACGGC+GGG | - | chr4_1:4099687-4099706 | Msa0530100:intron | 35.0% | |
!! | AGGAAGTGTTCACTTGATAA+TGG | + | chr4_1:4100180-4100199 | None:intergenic | 35.0% |
ATTCAAATAAGAACTCTGCC+CGG | + | chr4_1:4100216-4100235 | None:intergenic | 35.0% | |
GCAATTGGAATTGTTTCAGT+TGG | - | chr4_1:4100283-4100302 | Msa0530100:CDS | 35.0% | |
GAGTCAAATAAAGTGCATGA+TGG | - | chr4_1:4100308-4100327 | Msa0530100:CDS | 35.0% | |
ATTATCCAAGACCTCTTTAG+TGG | + | chr4_1:4100375-4100394 | None:intergenic | 35.0% | |
!!! | CTTTTACTTTTTCCCTTCTC+TGG | + | chr4_1:4100409-4100428 | None:intergenic | 35.0% |
TTCTTACGAGAAATATGCGT+GGG | - | chr4_1:4100451-4100470 | Msa0530100:intron | 35.0% | |
AATGGAGTGATGTGGTTATT+TGG | - | chr4_1:4100555-4100574 | Msa0530100:intron | 35.0% | |
! | AAAAGTGGTGTCAATAGCTT+TGG | - | chr4_1:4100737-4100756 | Msa0530100:intron | 35.0% |
AAAAGGTTACACTTACTCTC+GGG | + | chr4_1:4100837-4100856 | None:intergenic | 35.0% | |
GAAAAGGTTACACTTACTCT+CGG | + | chr4_1:4100838-4100857 | None:intergenic | 35.0% | |
CAATTGTGATACTCCTAGTT+AGG | - | chr4_1:4101230-4101249 | Msa0530100:intron | 35.0% | |
TAATACATTATCCTGACAGC+TGG | - | chr4_1:4101276-4101295 | Msa0530100:intron | 35.0% | |
AATACATTATCCTGACAGCT+GGG | - | chr4_1:4101277-4101296 | Msa0530100:intron | 35.0% | |
CTTAGTACATACGATCTTTC+AGG | - | chr4_1:4101515-4101534 | Msa0530100:intron | 35.0% | |
TAACTTAACATTGAGGCCTA+TGG | + | chr4_1:4101747-4101766 | None:intergenic | 35.0% | |
ACCTTAAAGCTTGGATATTG+TGG | - | chr4_1:4101838-4101857 | Msa0530100:intron | 35.0% | |
CTGCTTTCTAATGTTATTCG+TGG | - | chr4_1:4102187-4102206 | Msa0530100:intron | 35.0% | |
CCATGCCTCTAATACAAATA+TGG | + | chr4_1:4102231-4102250 | None:intergenic | 35.0% | |
CCATATTTGTATTAGAGGCA+TGG | - | chr4_1:4102228-4102247 | Msa0530100:intron | 35.0% | |
!! | ACGAGAGTATGATTTGTTAG+CGG | - | chr4_1:4102324-4102343 | Msa0530100:CDS | 35.0% |
GAATCCTATCTATCTGATGT+GGG | + | chr4_1:4102372-4102391 | None:intergenic | 35.0% | |
AGAATCCTATCTATCTGATG+TGG | + | chr4_1:4102373-4102392 | None:intergenic | 35.0% | |
GAGAAGAGTTTATAAAGAGG+AGG | - | chr4_1:4102394-4102413 | Msa0530100:CDS | 35.0% | |
TGATACCATGTCACGAAAAT+CGG | + | chr4_1:4102464-4102483 | None:intergenic | 35.0% | |
GAGAAGAGTTTATAAAGAGG+AGG | - | chr4_1:4102394-4102413 | Msa0530100:CDS | 35.0% | |
CTAACTCATCCTTACAAAAC+AGG | + | chr4_1:4102438-4102457 | None:intergenic | 35.0% | |
! | CTGTTTTGTAAGGATGAGTT+AGG | - | chr4_1:4102669-4102688 | Msa0530100:intron | 35.0% |
TAATCATGTCACGAAAAACG+GGG | + | chr4_1:4102695-4102714 | None:intergenic | 35.0% | |
GGAATCAGAAACTCATAAAG+CGG | + | chr4_1:4102785-4102804 | None:intergenic | 35.0% | |
!!! | TTTCAAGGGTGAGAGTATTT+TGG | - | chr4_1:4102819-4102838 | Msa0530100:intron | 35.0% |
AGTTCATTGCTCTATCTCAA+AGG | - | chr4_1:4102866-4102885 | Msa0530100:intron | 35.0% | |
AAACCTTCTGCTGATACTTT+GGG | + | chr4_1:4102900-4102919 | None:intergenic | 35.0% | |
AAAACCTTCTGCTGATACTT+TGG | + | chr4_1:4102901-4102920 | None:intergenic | 35.0% | |
!!! | CATTTTTTTTTACGGGGAAG+GGG | - | chr4_1:4102941-4102960 | Msa0530100:intron | 35.0% |
!!! | ATTTTTTTTTACGGGGAAGG+GGG | - | chr4_1:4102942-4102961 | Msa0530100:intron | 35.0% |
ATTCTCAACCTGAAAAAGCA+GGG | + | chr4_1:4103008-4103027 | None:intergenic | 35.0% | |
TAGGAAGTAATCCATCATCA+GGG | + | chr4_1:4103057-4103076 | None:intergenic | 35.0% | |
ATAGGAAGTAATCCATCATC+AGG | + | chr4_1:4103058-4103077 | None:intergenic | 35.0% | |
CTTCTTTAGTTAGTACTGTC+TGG | - | chr4_1:4103198-4103217 | Msa0530100:CDS | 35.0% | |
TTGCTTAAAGTTTGGGTACA+AGG | - | chr4_1:4103303-4103322 | Msa0530100:intron | 35.0% | |
TGCTTAAAGTTTGGGTACAA+GGG | - | chr4_1:4103304-4103323 | Msa0530100:intron | 35.0% | |
ATGTGGGAGAAATCAATGAA+AGG | - | chr4_1:4103610-4103629 | Msa0530100:CDS | 35.0% | |
TATATATGTGAGAAGAGTGG+AGG | - | chr4_1:4103676-4103695 | Msa0530100:intron | 35.0% | |
ATGATTCTGCATTGCAATAC+TGG | - | chr4_1:4103717-4103736 | Msa0530100:intron | 35.0% | |
ATAAACTTCTGCGAATCATC+AGG | + | chr4_1:4103878-4103897 | None:intergenic | 35.0% | |
! | GCACATTAAGGCTTTTCAAA+TGG | + | chr4_1:4103931-4103950 | None:intergenic | 35.0% |
TCAACAGAACAAGCACATTA+AGG | + | chr4_1:4103943-4103962 | None:intergenic | 35.0% | |
! | GCGGTTTTCATAAACTATCA+CGG | - | chr4_1:4104131-4104150 | Msa0530100:intron | 35.0% |
TAAACACTTGTGAGATGGTT+TGG | + | chr4_1:4104222-4104241 | None:intergenic | 35.0% | |
TCAACTCCAACAAAATTAGC+TGG | - | chr4_1:4104386-4104405 | Msa0530100:intron | 35.0% | |
! | TTCTCTCCAGCTAATTTTGT+TGG | + | chr4_1:4104395-4104414 | None:intergenic | 35.0% |
!!! | TTCTTTTTTTGACAGGAAGG+AGG | - | chr4_1:4104449-4104468 | Msa0530100:intron | 35.0% |
!! | CATTTTAAGGACATGAGTGT+GGG | - | chr4_1:4104535-4104554 | Msa0530100:intron | 35.0% |
CAACAAGACATACCAAGATT+GGG | - | chr4_1:4104624-4104643 | Msa0530100:intron | 35.0% | |
AACAAGACATACCAAGATTG+GGG | - | chr4_1:4104625-4104644 | Msa0530100:intron | 35.0% | |
ATATATTCCAACCCCAATCT+TGG | + | chr4_1:4104639-4104658 | None:intergenic | 35.0% | |
TACTCTCTTTGTCCCATATT+GGG | - | chr4_1:4104775-4104794 | Msa0530100:intron | 35.0% | |
TTTAACACCAGTGTTAACCT+GGG | + | chr4_1:4104930-4104949 | None:intergenic | 35.0% | |
GGTCATTCCATTAGATGAAT+GGG | - | chr4_1:4105021-4105040 | Msa0530100:intron | 35.0% | |
TCTTTGAATCTTGGTTGAAG+TGG | + | chr4_1:4105214-4105233 | None:intergenic | 35.0% | |
CTTCAACCAAGATTCAAAGA+CGG | - | chr4_1:4105214-4105233 | Msa0530100:intron | 35.0% | |
TTCAACCAAGATTCAAAGAC+GGG | - | chr4_1:4105215-4105234 | Msa0530100:intron | 35.0% | |
TAAGATGTCAGAACCTTCAT+TGG | - | chr4_1:4105262-4105281 | Msa0530100:intron | 35.0% | |
AAGATGTCAGAACCTTCATT+GGG | - | chr4_1:4105263-4105282 | Msa0530100:intron | 35.0% | |
TGAGTAGTGGTAGCAGTAAA+TGG | - | chr4_1:4098467-4098486 | Msa0530100:three_prime_UTR | 40.0% | |
! | AAAAGCATAGCAAGACGCTT+AGG | + | chr4_1:4098526-4098545 | None:intergenic | 40.0% |
TCTCTGATATACTATCGGTG+TGG | - | chr4_1:4098767-4098786 | Msa0530100:three_prime_UTR | 40.0% | |
ACTAAGGAGTAAGGACCATT+TGG | - | chr4_1:4098917-4098936 | Msa0530100:CDS | 40.0% | |
!! | TGTGTAGCTTTGTTGTGTAG+CGG | - | chr4_1:4099119-4099138 | Msa0530100:intron | 40.0% |
CTATCGCAGATCACAGAAAA+TGG | + | chr4_1:4099160-4099179 | None:intergenic | 40.0% | |
ACCGATGAATGAGAGAACTT+CGG | - | chr4_1:4099229-4099248 | Msa0530100:intron | 40.0% | |
TCCGAAGTTCTCTCATTCAT+CGG | + | chr4_1:4099233-4099252 | None:intergenic | 40.0% | |
ATTGGCACAGACAAGTACAT+CGG | - | chr4_1:4099334-4099353 | Msa0530100:CDS | 40.0% | |
CTTCATATTGCAGGTACATC+TGG | + | chr4_1:4099426-4099445 | None:intergenic | 40.0% | |
!! | TTCAGAAGTACTTCTTGGGA+AGG | - | chr4_1:4099487-4099506 | Msa0530100:intron | 40.0% |
ATGCACAATTGAGTATGGTG+TGG | - | chr4_1:4099547-4099566 | Msa0530100:intron | 40.0% | |
TGTGGCTGAAATCAGACTAT+AGG | - | chr4_1:4099565-4099584 | Msa0530100:intron | 40.0% | |
TCAGACTATAGGTCGAGAAT+AGG | - | chr4_1:4099576-4099595 | Msa0530100:intron | 40.0% | |
CAGACTATAGGTCGAGAATA+GGG | - | chr4_1:4099577-4099596 | Msa0530100:intron | 40.0% | |
TTCCTGCCAAACAACCAAAT+TGG | - | chr4_1:4099661-4099680 | Msa0530100:intron | 40.0% | |
TACCAATTTGGTTGTTTGGC+AGG | + | chr4_1:4099666-4099685 | None:intergenic | 40.0% | |
AATCAGTACGAAAGTAGGAG+TGG | + | chr4_1:4100093-4100112 | None:intergenic | 40.0% | |
ATCAAGTGAACACTTCCTTG+TGG | - | chr4_1:4100182-4100201 | Msa0530100:intron | 40.0% | |
ACTCGAAGGGAAAAACTAAC+AGG | - | chr4_1:4100348-4100367 | Msa0530100:intron | 40.0% | |
AACTAACAGGTCCACTAAAG+AGG | - | chr4_1:4100361-4100380 | Msa0530100:intron | 40.0% | |
ATCCCATTGATATCCAGAGA+AGG | - | chr4_1:4100393-4100412 | Msa0530100:intron | 40.0% | |
TCCCATTGATATCCAGAGAA+GGG | - | chr4_1:4100394-4100413 | Msa0530100:intron | 40.0% | |
TCCCTTCTCTGGATATCAAT+GGG | + | chr4_1:4100398-4100417 | None:intergenic | 40.0% | |
TTCCCTTCTCTGGATATCAA+TGG | + | chr4_1:4100399-4100418 | None:intergenic | 40.0% | |
AAGAAGCAATGCTTCATGCT+TGG | - | chr4_1:4100426-4100445 | Msa0530100:intron | 40.0% | |
GTTCTTACGAGAAATATGCG+TGG | - | chr4_1:4100450-4100469 | Msa0530100:intron | 40.0% | |
TCTTACGAGAAATATGCGTG+GGG | - | chr4_1:4100452-4100471 | Msa0530100:intron | 40.0% | |
ACCATACCTGTAGTTCATCT+TGG | + | chr4_1:4100478-4100497 | None:intergenic | 40.0% | |
GATGATCTAATGGAGTGATG+TGG | - | chr4_1:4100547-4100566 | Msa0530100:intron | 40.0% | |
!!! | TTGACACCACTTTTTGACTG+AGG | + | chr4_1:4100731-4100750 | None:intergenic | 40.0% |
!! | GTGTTTTCGAGACAACCATA+AGG | - | chr4_1:4101339-4101358 | Msa0530100:intron | 40.0% |
!! | CAATATCTCTGGCTTTGTCA+AGG | + | chr4_1:4101553-4101572 | None:intergenic | 40.0% |
! | CTTTTGTGTCCATAAAGGTG+TGG | - | chr4_1:4101788-4101807 | Msa0530100:intron | 40.0% |
!! | CATAAAGGTGTGGCTTTTGT+GGG | - | chr4_1:4101798-4101817 | Msa0530100:intron | 40.0% |
GCCACAATATCCAAGCTTTA+AGG | + | chr4_1:4101842-4101861 | None:intergenic | 40.0% | |
! | TAGTACTAGCTTGATGCCAT+TGG | - | chr4_1:4101906-4101925 | Msa0530100:intron | 40.0% |
CCACAAAATAGCAGATCCAA+TGG | + | chr4_1:4101925-4101944 | None:intergenic | 40.0% | |
!!! | CCATTGGATCTGCTATTTTG+TGG | - | chr4_1:4101922-4101941 | Msa0530100:intron | 40.0% |
! | TGTATTAGAGGCATGGATCT+TGG | - | chr4_1:4102235-4102254 | Msa0530100:intron | 40.0% |
TCATTCACATGCCTGACTTT+AGG | - | chr4_1:4102277-4102296 | Msa0530100:intron | 40.0% | |
AAAGCCTTTGACCTAAAGTC+AGG | + | chr4_1:4102291-4102310 | None:intergenic | 40.0% | |
TAGTCCCACATCAGATAGAT+AGG | - | chr4_1:4102365-4102384 | Msa0530100:CDS | 40.0% | |
ATACCATGTCACGAAAATCG+GGG | + | chr4_1:4102462-4102481 | None:intergenic | 40.0% | |
GATACCATGTCACGAAAATC+GGG | + | chr4_1:4102463-4102482 | None:intergenic | 40.0% | |
GAATCCTATCTATCCGATGT+GGG | + | chr4_1:4102602-4102621 | None:intergenic | 40.0% | |
AGAATCCTATCTATCCGATG+TGG | + | chr4_1:4102603-4102622 | None:intergenic | 40.0% | |
ACTCATCCTTACAAAACAGG+CGG | + | chr4_1:4102668-4102687 | None:intergenic | 40.0% | |
CTCTCACCCTTGAAAAATGA+AGG | + | chr4_1:4102814-4102833 | None:intergenic | 40.0% | |
!!! | GAGAGTATTTTGGCAGATTC+TGG | - | chr4_1:4102829-4102848 | Msa0530100:intron | 40.0% |
ATTGCTCTATCTCAAAGGAC+CGG | - | chr4_1:4102871-4102890 | Msa0530100:intron | 40.0% | |
CATTCTCAACCTGAAAAAGC+AGG | + | chr4_1:4103009-4103028 | None:intergenic | 40.0% | |
! | AATCCTCATAGTGGAACAAC+AGG | - | chr4_1:4103085-4103104 | Msa0530100:intron | 40.0% |
GTGTTAATACCTATCACCCA+TGG | + | chr4_1:4103134-4103153 | None:intergenic | 40.0% | |
! | GCAGAAGTTTATGTCACTTG+CGG | - | chr4_1:4103886-4103905 | Msa0530100:intron | 40.0% |
TGGCATAAACACTTGTGAGA+TGG | + | chr4_1:4104227-4104246 | None:intergenic | 40.0% | |
! | GACTTTATTTGCAGCTTGCT+TGG | - | chr4_1:4104342-4104361 | Msa0530100:intron | 40.0% |
! | CTATTTCTTTCATTCTGGGG+AGG | - | chr4_1:4104415-4104434 | Msa0530100:intron | 40.0% |
!! | GCATTTTAAGGACATGAGTG+TGG | - | chr4_1:4104534-4104553 | Msa0530100:intron | 40.0% |
TTGAGTCACTCTTCTACCTT+TGG | - | chr4_1:4104590-4104609 | Msa0530100:intron | 40.0% | |
! | ATCTTGGTATGTCTTGTTGC+CGG | + | chr4_1:4104623-4104642 | None:intergenic | 40.0% |
GCAACAAGACATACCAAGAT+TGG | - | chr4_1:4104623-4104642 | Msa0530100:intron | 40.0% | |
GTACTCTCTTTGTCCCATAT+TGG | - | chr4_1:4104774-4104793 | Msa0530100:intron | 40.0% | |
CTTTAACACCAGTGTTAACC+TGG | + | chr4_1:4104931-4104950 | None:intergenic | 40.0% | |
GATGCAAAGTTTCTTTCTCG+CGG | - | chr4_1:4104958-4104977 | Msa0530100:intron | 40.0% | |
! | TCTTCTCTTTTCGCCTTCTT+CGG | - | chr4_1:4105000-4105019 | Msa0530100:intron | 40.0% |
TCTAATGGAATGACCGAAGA+AGG | + | chr4_1:4105016-4105035 | None:intergenic | 40.0% | |
CGGTCATTCCATTAGATGAA+TGG | - | chr4_1:4105020-4105039 | Msa0530100:intron | 40.0% | |
TCCTTGTCACAATCCTCAAA+GGG | + | chr4_1:4105066-4105085 | None:intergenic | 40.0% | |
TTCCTTGTCACAATCCTCAA+AGG | + | chr4_1:4105067-4105086 | None:intergenic | 40.0% | |
! | TCATGGTAGAGAAGCATGAA+CGG | + | chr4_1:4105179-4105198 | None:intergenic | 40.0% |
AGTGGTTCATCAACTAGTCA+TGG | + | chr4_1:4105196-4105215 | None:intergenic | 40.0% | |
TCAACCAAGATTCAAAGACG+GGG | - | chr4_1:4105216-4105235 | Msa0530100:intron | 40.0% | |
AATTCCCCGTCTTTGAATCT+TGG | + | chr4_1:4105223-4105242 | None:intergenic | 40.0% | |
!! | ACGGGGAATTTGTTCCATTT+TGG | - | chr4_1:4105233-4105252 | Msa0530100:intron | 40.0% |
ACATCTTACAGGCTCCAAAA+TGG | + | chr4_1:4105250-4105269 | None:intergenic | 40.0% | |
! | TGAAGGTTCTGACATCTTAC+AGG | + | chr4_1:4105261-4105280 | None:intergenic | 40.0% |
TCACAATTGCTTCCCAATGA+AGG | + | chr4_1:4105278-4105297 | None:intergenic | 40.0% | |
TTGGGAAGCAATTGTGAAAC+AGG | - | chr4_1:4105281-4105300 | Msa0530100:intron | 40.0% | |
GGACGCTTCAAGTAATAAGC+TGG | + | chr4_1:4098505-4098524 | None:intergenic | 45.0% | |
!! | GTGTAGCTTTGTTGTGTAGC+GGG | - | chr4_1:4099120-4099139 | Msa0530100:intron | 45.0% |
TCGCAGATCACAGAAAATGG+CGG | + | chr4_1:4099157-4099176 | None:intergenic | 45.0% | |
TGTCTGTGCCAATGCTTCAT+AGG | + | chr4_1:4099327-4099346 | None:intergenic | 45.0% | |
GCAACGATGCTTCATATTGC+AGG | + | chr4_1:4099435-4099454 | None:intergenic | 45.0% | |
TGAGATGGCCTGCATACATT+TGG | - | chr4_1:4100056-4100075 | Msa0530100:CDS | 45.0% | |
TTGTCGTCTGCCAATCAATC+TGG | - | chr4_1:4100131-4100150 | Msa0530100:intron | 45.0% | |
GCCAAGATGAACTACAGGTA+TGG | - | chr4_1:4100474-4100493 | Msa0530100:intron | 45.0% | |
TACCAGCCTCAGTCAAAAAG+TGG | - | chr4_1:4100722-4100741 | Msa0530100:intron | 45.0% | |
!! | AGTGGTGTCAATAGCTTTGG+AGG | - | chr4_1:4100740-4100759 | Msa0530100:intron | 45.0% |
!! | GTCAATAGCTTTGGAGGTCT+TGG | - | chr4_1:4100746-4100765 | Msa0530100:intron | 45.0% |
GTCTTCATATGCAGGGGAAA+AGG | + | chr4_1:4100854-4100873 | None:intergenic | 45.0% | |
AACCAGGTCTTCATATGCAG+GGG | + | chr4_1:4100860-4100879 | None:intergenic | 45.0% | |
CAACCAGGTCTTCATATGCA+GGG | + | chr4_1:4100861-4100880 | None:intergenic | 45.0% | |
ACAACCAGGTCTTCATATGC+AGG | + | chr4_1:4100862-4100881 | None:intergenic | 45.0% | |
TCACCACAATCCAGAGTAGT+AGG | - | chr4_1:4101485-4101504 | Msa0530100:intron | 45.0% | |
CAGATAGATTACTGCCTGCA+TGG | - | chr4_1:4101573-4101592 | Msa0530100:intron | 45.0% | |
GCATGTGTAGAAACTTACCC+CGG | + | chr4_1:4101669-4101688 | None:intergenic | 45.0% | |
CCACAAAAGCCACACCTTTA+TGG | + | chr4_1:4101800-4101819 | None:intergenic | 45.0% | |
!! | CCATAAAGGTGTGGCTTTTG+TGG | - | chr4_1:4101797-4101816 | Msa0530100:intron | 45.0% |
CATGCCTGACTTTAGGTCAA+AGG | - | chr4_1:4102284-4102303 | Msa0530100:intron | 45.0% | |
! | ATTTGTTAGCGGCCAACACT+CGG | - | chr4_1:4102335-4102354 | Msa0530100:CDS | 45.0% |
GACATGGTATCAGAGCCTAT+CGG | - | chr4_1:4102472-4102491 | Msa0530100:intron | 45.0% | |
ACATGGTATCAGAGCCTATC+GGG | - | chr4_1:4102473-4102492 | Msa0530100:intron | 45.0% | |
TAGTCCCACATCGGATAGAT+AGG | - | chr4_1:4102595-4102614 | Msa0530100:intron | 45.0% | |
TACAAAACAGGCGGCTTGTA+CGG | + | chr4_1:4102659-4102678 | None:intergenic | 45.0% | |
! | TACAAGCCGCCTGTTTTGTA+AGG | - | chr4_1:4102659-4102678 | Msa0530100:intron | 45.0% |
! | AGACCCAAAGTATCAGCAGA+AGG | - | chr4_1:4102894-4102913 | Msa0530100:intron | 45.0% |
!!! | GATTTGCTCCCTGCTTTTTC+AGG | - | chr4_1:4102997-4103016 | Msa0530100:intron | 45.0% |
TAGCCTGTTGTTCCACTATG+AGG | + | chr4_1:4103091-4103110 | None:intergenic | 45.0% | |
GGCTACTCTCCTATCACATT+TGG | - | chr4_1:4103106-4103125 | Msa0530100:intron | 45.0% | |
TTCATCCATCTGCAGGTACT+CGG | + | chr4_1:4103804-4103823 | None:intergenic | 45.0% | |
!! | ATGCTTGCTTTGGGATCATC+TGG | - | chr4_1:4103845-4103864 | Msa0530100:intron | 45.0% |
!! | GCTTTGGGATCATCTGGTTA+TGG | - | chr4_1:4103851-4103870 | Msa0530100:intron | 45.0% |
! | GTTTATGTCACTTGCGGAAG+AGG | - | chr4_1:4103892-4103911 | Msa0530100:intron | 45.0% |
! | CTTGTGAGATGGTTTGGAAG+AGG | + | chr4_1:4104216-4104235 | None:intergenic | 45.0% |
ACATGAGTGTGGGTACATCA+TGG | - | chr4_1:4104545-4104564 | Msa0530100:intron | 45.0% | |
GTACATCATGGAACATCCTG+AGG | - | chr4_1:4104557-4104576 | Msa0530100:intron | 45.0% | |
AAGAGTGACTCAACTGTCTC+TGG | + | chr4_1:4104583-4104602 | None:intergenic | 45.0% | |
AGACATACCAAGATTGGGGT+TGG | - | chr4_1:4104629-4104648 | Msa0530100:intron | 45.0% | |
GAAGAACTCTCGCATAGAGT+CGG | - | chr4_1:4104672-4104691 | Msa0530100:intron | 45.0% | |
AAGAACTCTCGCATAGAGTC+GGG | - | chr4_1:4104673-4104692 | Msa0530100:intron | 45.0% | |
ATGTTGTTGTCTCACTTCCC+AGG | - | chr4_1:4104910-4104929 | Msa0530100:intron | 45.0% | |
! | ACCCTTTGAGGATTGTGACA+AGG | - | chr4_1:4105062-4105081 | Msa0530100:intron | 45.0% |
GATTGTGACAAGGAACGAAG+CGG | - | chr4_1:4105072-4105091 | Msa0530100:intron | 45.0% | |
TCCTAGAATAGGTGGCAGAA+AGG | - | chr4_1:4105132-4105151 | Msa0530100:intron | 45.0% | |
TCCTTTCTGCCACCTATTCT+AGG | + | chr4_1:4105136-4105155 | None:intergenic | 45.0% | |
AGAATAGGTGGCAGAAAGGA+AGG | - | chr4_1:4105136-4105155 | Msa0530100:intron | 45.0% | |
!!! | TTTTTTTTTTTTTTTTTTGT+TGG | - | chr4_1:4101455-4101474 | Msa0530100:intron | 5.0% |
!! | TTTGAAAATAAAAAATTATA+AGG | + | chr4_1:4103497-4103516 | None:intergenic | 5.0% |
!! | ATTTATTAAAAAAAATAAAG+TGG | + | chr4_1:4104837-4104856 | None:intergenic | 5.0% |
GGGAGTAGATCAGTGAGTAG+TGG | - | chr4_1:4098454-4098473 | Msa0530100:three_prime_UTR | 50.0% | |
CAAGACACGCCTTTGATCAG+AGG | + | chr4_1:4098694-4098713 | None:intergenic | 50.0% | |
TCTGGTGTACGATGCACATG+TGG | + | chr4_1:4099408-4099427 | None:intergenic | 50.0% | |
!! | AACGGCGGGTGTTGATTGTT+TGG | - | chr4_1:4099701-4099720 | Msa0530100:intron | 50.0% |
CAGGTGTGCCAAATGTATGC+AGG | + | chr4_1:4100067-4100086 | None:intergenic | 50.0% | |
ACGAAAGTAGGAGTGGTGTC+AGG | + | chr4_1:4100086-4100105 | None:intergenic | 50.0% | |
TGGCAGACGACAATTCACGT+CGG | + | chr4_1:4100124-4100143 | None:intergenic | 50.0% | |
! | TCCTTTGGGGGCTAAGCAAT+TGG | - | chr4_1:4100268-4100287 | Msa0530100:CDS | 50.0% |
TCCAATTGCTTAGCCCCCAA+AGG | + | chr4_1:4100272-4100291 | None:intergenic | 50.0% | |
AAAGTGCATGATGGCACTGC+CGG | - | chr4_1:4100317-4100336 | Msa0530100:CDS | 50.0% | |
CAGGTCCACTAAAGAGGTCT+TGG | - | chr4_1:4100367-4100386 | Msa0530100:intron | 50.0% | |
!!! | CACCACTTTTTGACTGAGGC+TGG | + | chr4_1:4100727-4100746 | None:intergenic | 50.0% |
TTCCCCTGCATATGAAGACC+TGG | - | chr4_1:4100855-4100874 | Msa0530100:CDS | 50.0% | |
CCACCTACTACTCTGGATTG+TGG | + | chr4_1:4101491-4101510 | None:intergenic | 50.0% | |
CCACAATCCAGAGTAGTAGG+TGG | - | chr4_1:4101488-4101507 | Msa0530100:intron | 50.0% | |
AAGAAGGCCACCTACTACTC+TGG | + | chr4_1:4101498-4101517 | None:intergenic | 50.0% | |
TTTGTTAGCGGCCAACACTC+GGG | - | chr4_1:4102336-4102355 | Msa0530100:CDS | 50.0% | |
GACTAAATCCACCCGAGTGT+TGG | + | chr4_1:4102350-4102369 | None:intergenic | 50.0% | |
!! | CAAAACTGGCTTGTACGGTG+AGG | + | chr4_1:4102424-4102443 | None:intergenic | 50.0% |
TGTGTTAGCGGCCAACACTT+GGG | - | chr4_1:4102563-4102582 | Msa0530100:intron | 50.0% | |
TAAATCCCACCCCCAAGTGT+TGG | + | chr4_1:4102577-4102596 | None:intergenic | 50.0% | |
GGTGGGATTTAGTCCCACAT+CGG | - | chr4_1:4102586-4102605 | Msa0530100:intron | 50.0% | |
ATTCCTGACTCTGGCTGTGT+TGG | - | chr4_1:4102744-4102763 | Msa0530100:intron | 50.0% | |
CTGCTGATACTTTGGGTCTC+CGG | + | chr4_1:4102893-4102912 | None:intergenic | 50.0% | |
!!! | TTTTTTTACGGGGAAGGGGG+AGG | - | chr4_1:4102945-4102964 | Msa0530100:intron | 50.0% |
TCCTATCACATTTGGCGCCA+TGG | - | chr4_1:4103114-4103133 | Msa0530100:intron | 50.0% | |
CCTATCACATTTGGCGCCAT+GGG | - | chr4_1:4103115-4103134 | Msa0530100:intron | 50.0% | |
TTCAACCGAGTACCTGCAGA+TGG | - | chr4_1:4103796-4103815 | Msa0530100:intron | 50.0% | |
ACGCTAGTTCATCCATCTGC+AGG | + | chr4_1:4103811-4103830 | None:intergenic | 50.0% | |
AACTAGCGTGCTTTGCTCCA+GGG | - | chr4_1:4103822-4103841 | Msa0530100:intron | 50.0% | |
TTCTACCTTTGGCGCCTAAC+CGG | - | chr4_1:4104601-4104620 | Msa0530100:intron | 50.0% | |
! | GGTATGTCTTGTTGCCGGTT+AGG | + | chr4_1:4104618-4104637 | None:intergenic | 50.0% |
GTCGGGCTATGTTGGACTAA+AGG | - | chr4_1:4104690-4104709 | Msa0530100:intron | 50.0% | |
!! | TCCCATATTGGGTGCCACTT+TGG | - | chr4_1:4104786-4104805 | Msa0530100:intron | 50.0% |
GCCAAAGTGGCACCCAATAT+GGG | + | chr4_1:4104790-4104809 | None:intergenic | 50.0% | |
TGCCAAAGTGGCACCCAATA+TGG | + | chr4_1:4104791-4104810 | None:intergenic | 50.0% | |
CTCACTTCCCAGGTTAACAC+TGG | - | chr4_1:4104920-4104939 | Msa0530100:intron | 50.0% | |
! | ACACAGAAGCACACCCTTTG+AGG | - | chr4_1:4105050-4105069 | Msa0530100:intron | 50.0% |
TAGGTGGCAGAAAGGAAGGT+CGG | - | chr4_1:4105140-4105159 | Msa0530100:intron | 50.0% | |
GTCTGACACGTGTCAGTGTC+TGG | - | chr4_1:4098715-4098734 | Msa0530100:three_prime_UTR | 55.0% | |
CAGACGACAATTCACGTCGG+AGG | + | chr4_1:4100121-4100140 | None:intergenic | 55.0% | |
CTTCCTTGTGGCTGTGTTGC+CGG | - | chr4_1:4100194-4100213 | Msa0530100:intron | 55.0% | |
TTCCTTGTGGCTGTGTTGCC+GGG | - | chr4_1:4100195-4100214 | Msa0530100:intron | 55.0% | |
AAGTGCATGATGGCACTGCC+GGG | - | chr4_1:4100318-4100337 | Msa0530100:CDS | 55.0% | |
TCCCTTCGAGTCAACCTTCC+CGG | + | chr4_1:4100339-4100358 | None:intergenic | 55.0% | |
GTGGGGCCAAGATGAACTAC+AGG | - | chr4_1:4100469-4100488 | Msa0530100:intron | 55.0% | |
CCTGTAGGTGTGTTCCATGC+AGG | + | chr4_1:4101590-4101609 | None:intergenic | 55.0% | |
CCTGCATGGAACACACCTAC+AGG | - | chr4_1:4101587-4101606 | Msa0530100:intron | 55.0% | |
CAAGGACGTGCACACAATCC+TGG | - | chr4_1:4101638-4101657 | Msa0530100:intron | 55.0% | |
GACGTGCACACAATCCTGGA+TGG | - | chr4_1:4101642-4101661 | Msa0530100:intron | 55.0% | |
GCACACAATCCTGGATGGAC+CGG | - | chr4_1:4101647-4101666 | Msa0530100:intron | 55.0% | |
CACACAATCCTGGATGGACC+GGG | - | chr4_1:4101648-4101667 | Msa0530100:intron | 55.0% | |
ACACAATCCTGGATGGACCG+GGG | - | chr4_1:4101649-4101668 | Msa0530100:intron | 55.0% | |
AAACTTACCCCGGTCCATCC+AGG | + | chr4_1:4101659-4101678 | None:intergenic | 55.0% | |
! | AGGCCCCGATTTTCGTGACA+TGG | - | chr4_1:4102456-4102475 | Msa0530100:intron | 55.0% |
AGCCTATCGGGACCATCGTT+GGG | - | chr4_1:4102485-4102504 | Msa0530100:intron | 55.0% | |
AGATGCAGGAAGCCCAACGA+TGG | + | chr4_1:4102500-4102519 | None:intergenic | 55.0% | |
TTCCTGCATCTCCACGCTTC+AGG | - | chr4_1:4102509-4102528 | Msa0530100:intron | 55.0% | |
GTGTGTTAGCGGCCAACACT+TGG | - | chr4_1:4102562-4102581 | Msa0530100:intron | 55.0% | |
GTGTTAGCGGCCAACACTTG+GGG | - | chr4_1:4102564-4102583 | Msa0530100:intron | 55.0% | |
TGTTAGCGGCCAACACTTGG+GGG | - | chr4_1:4102565-4102584 | Msa0530100:intron | 55.0% | |
TGACCAACACAGCCAGAGTC+AGG | + | chr4_1:4102750-4102769 | None:intergenic | 55.0% | |
! | GACTCTGGCTGTGTTGGTCA+CGG | - | chr4_1:4102750-4102769 | Msa0530100:intron | 55.0% |
CCCATGGCGCCAAATGTGAT+AGG | + | chr4_1:4103118-4103137 | None:intergenic | 55.0% | |
CATTTGGCGCCATGGGTGAT+AGG | - | chr4_1:4103122-4103141 | Msa0530100:intron | 55.0% | |
GAACTAGCGTGCTTTGCTCC+AGG | - | chr4_1:4103821-4103840 | Msa0530100:intron | 55.0% | |
TGCTCCAGGGATGCTTGCTT+TGG | - | chr4_1:4103835-4103854 | Msa0530100:intron | 55.0% | |
GCTCCAGGGATGCTTGCTTT+GGG | - | chr4_1:4103836-4103855 | Msa0530100:intron | 55.0% | |
GATCCCAAAGCAAGCATCCC+TGG | + | chr4_1:4103842-4103861 | None:intergenic | 55.0% | |
ACTCAACTGTCTCTGGCCTC+AGG | + | chr4_1:4104576-4104595 | None:intergenic | 55.0% | |
CGCATAGAGTCGGGCTATGT+TGG | - | chr4_1:4104682-4104701 | Msa0530100:intron | 55.0% | |
TGGCAGAAAGGAAGGTCGGT+CGG | - | chr4_1:4105144-4105163 | Msa0530100:intron | 55.0% | |
!! | TGCCGGGAAGGTTGACTCGA+AGG | - | chr4_1:4100334-4100353 | Msa0530100:CDS | 60.0% |
!! | GCCGGGAAGGTTGACTCGAA+GGG | - | chr4_1:4100335-4100354 | Msa0530100:CDS | 60.0% |
GAGTTTGCGACCCAGCTGTC+AGG | + | chr4_1:4101290-4101309 | None:intergenic | 60.0% | |
CAGCTGGGTCGCAAACTCTC+TGG | - | chr4_1:4101292-4101311 | Msa0530100:intron | 60.0% | |
GAGCCTATCGGGACCATCGT+TGG | - | chr4_1:4102484-4102503 | Msa0530100:intron | 60.0% | |
AGCCCAACGATGGTCCCGAT+AGG | + | chr4_1:4102490-4102509 | None:intergenic | 60.0% | |
TCTCCACGCTTCAGGCCCAT+TGG | - | chr4_1:4102517-4102536 | Msa0530100:intron | 60.0% | |
CTCCACGCTTCAGGCCCATT+GGG | - | chr4_1:4102518-4102537 | Msa0530100:intron | 60.0% | |
TCCACGCTTCAGGCCCATTG+GGG | - | chr4_1:4102519-4102538 | Msa0530100:intron | 60.0% | |
AACAGGCGGCTTGTACGGTG+AGG | + | chr4_1:4102654-4102673 | None:intergenic | 60.0% | |
! | TGTTGCCGGTTAGGCGCCAA+AGG | + | chr4_1:4104609-4104628 | None:intergenic | 60.0% |
GGCAGAAAGGAAGGTCGGTC+GGG | - | chr4_1:4105145-4105164 | Msa0530100:intron | 60.0% | |
TGCCCGGCAACACAGCCACA+AGG | + | chr4_1:4100200-4100219 | None:intergenic | 65.0% | |
GCATGATGGCACTGCCGGGA+AGG | - | chr4_1:4100322-4100341 | Msa0530100:CDS | 65.0% | |
GTTAGCGGCCAACACTCGGG+TGG | - | chr4_1:4102339-4102358 | Msa0530100:CDS | 65.0% | |
GGCCTGAAGCGTGGAGATGC+AGG | + | chr4_1:4102514-4102533 | None:intergenic | 65.0% | |
ACGCTTCAGGCCCATTGGGG+CGG | - | chr4_1:4102522-4102541 | Msa0530100:intron | 65.0% | |
ACGCTTCAGCCCGCCCCAAT+GGG | + | chr4_1:4102535-4102554 | None:intergenic | 65.0% | |
! | GCGTGAGGGGGGTGTGTTAG+CGG | - | chr4_1:4102551-4102570 | Msa0530100:intron | 65.0% |
TAGCGGCCAACACTTGGGGG+TGG | - | chr4_1:4102568-4102587 | Msa0530100:intron | 65.0% | |
AGCGGCCAACACTTGGGGGT+GGG | - | chr4_1:4102569-4102588 | Msa0530100:intron | 65.0% | |
GCCCCAATGGGCCTGAAGCG+TGG | + | chr4_1:4102523-4102542 | None:intergenic | 70.0% | |
CGCTTCAGGCCCATTGGGGC+GGG | - | chr4_1:4102523-4102542 | Msa0530100:intron | 70.0% | |
CACGCTTCAGCCCGCCCCAA+TGG | + | chr4_1:4102536-4102555 | None:intergenic | 70.0% | |
!! | TTGGGGCGGGCTGAAGCGTG+AGG | - | chr4_1:4102536-4102555 | Msa0530100:intron | 70.0% |
!! | TGGGGCGGGCTGAAGCGTGA+GGG | - | chr4_1:4102537-4102556 | Msa0530100:intron | 70.0% |
!! | GGGGCGGGCTGAAGCGTGAG+GGG | - | chr4_1:4102538-4102557 | Msa0530100:intron | 75.0% |
!! | GGGCGGGCTGAAGCGTGAGG+GGG | - | chr4_1:4102539-4102558 | Msa0530100:intron | 75.0% |
!! | GGCGGGCTGAAGCGTGAGGG+GGG | - | chr4_1:4102540-4102559 | Msa0530100:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 4098445 | 4105519 | 4098445 | ID=Msa0530100;Name=Msa0530100 |
chr4_1 | mRNA | 4098445 | 4105519 | 4098445 | ID=Msa0530100-mRNA-1;Parent=Msa0530100;Name=Msa0530100-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.83|0.92|1|1|1|13|348|534 |
chr4_1 | exon | 4098445 | 4099032 | 4098445 | ID=Msa0530100-mRNA-1:exon:1223;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4099250 | 4099420 | 4099250 | ID=Msa0530100-mRNA-1:exon:1222;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4100051 | 4100149 | 4100051 | ID=Msa0530100-mRNA-1:exon:1221;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4100250 | 4100358 | 4100250 | ID=Msa0530100-mRNA-1:exon:1220;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4100609 | 4100674 | 4100609 | ID=Msa0530100-mRNA-1:exon:1219;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4100821 | 4100945 | 4100821 | ID=Msa0530100-mRNA-1:exon:1218;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4101049 | 4101138 | 4101049 | ID=Msa0530100-mRNA-1:exon:1217;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4102294 | 4102465 | 4102294 | ID=Msa0530100-mRNA-1:exon:1216;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4102604 | 4102669 | 4102604 | ID=Msa0530100-mRNA-1:exon:1215;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4103124 | 4103236 | 4103124 | ID=Msa0530100-mRNA-1:exon:1214;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4103474 | 4103662 | 4103474 | ID=Msa0530100-mRNA-1:exon:1213;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4104025 | 4104072 | 4104025 | ID=Msa0530100-mRNA-1:exon:1212;Parent=Msa0530100-mRNA-1 |
chr4_1 | exon | 4105403 | 4105519 | 4105403 | ID=Msa0530100-mRNA-1:exon:1211;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4105403 | 4105519 | 4105403 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4104025 | 4104072 | 4104025 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4103474 | 4103662 | 4103474 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4103124 | 4103236 | 4103124 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4102604 | 4102669 | 4102604 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4102294 | 4102465 | 4102294 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4101049 | 4101138 | 4101049 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4100821 | 4100945 | 4100821 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4100609 | 4100674 | 4100609 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4100250 | 4100358 | 4100250 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4100051 | 4100149 | 4100051 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4099250 | 4099420 | 4099250 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | CDS | 4098793 | 4099032 | 4098793 | ID=Msa0530100-mRNA-1:cds;Parent=Msa0530100-mRNA-1 |
chr4_1 | three_prime_UTR | 4098445 | 4098792 | 4098445 | ID=Msa0530100-mRNA-1:three_prime_utr;Parent=Msa0530100-mRNA-1 |
Gene Sequence |
Protein sequence |