AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1341340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341340 MtrunA17_Chr7g0274951 93.636 440 10 1 1 422 1 440 0.0 850
Msa1341340 MtrunA17_Chr1g0189961 67.699 452 113 7 1 421 1 450 0.0 617
Msa1341340 MtrunA17_Chr8g0380511 56.298 389 141 8 53 421 36 415 1.62e-156 448
Msa1341340 MtrunA17_Chr2g0309251 52.713 387 160 5 53 421 44 425 1.40e-149 431
Msa1341340 MtrunA17_Chr8g0368161 53.964 391 137 6 50 421 81 447 1.96e-144 419
Msa1341340 MtrunA17_Chr4g0058771 52.618 401 149 7 39 421 103 480 6.04e-144 419
Msa1341340 MtrunA17_Chr3g0117271 53.197 391 141 8 49 421 129 495 4.36e-140 409
Msa1341340 MtrunA17_Chr5g0413131 50.118 425 169 8 16 421 62 462 8.36e-138 402
Msa1341340 MtrunA17_Chr8g0368241 44.988 429 187 9 17 421 10 413 2.79e-122 361
Msa1341340 MtrunA17_Chr2g0314461 43.970 398 175 8 43 421 37 405 1.68e-111 333
Msa1341340 MtrunA17_Chr2g0314471 41.452 427 193 9 22 421 9 405 2.66e-110 330
Msa1341340 MtrunA17_Chr2g0314451 42.558 430 192 8 18 421 4 404 1.06e-108 326
Msa1341340 MtrunA17_Chr8g0368201 45.092 326 129 7 131 421 9 319 3.29e-90 276
Msa1341340 MtrunA17_Chr6g0453411 39.948 383 183 12 70 421 8 374 1.10e-86 268
Msa1341340 MtrunA17_Chr8g0368341 39.889 361 177 7 71 421 4 334 2.88e-86 266
Msa1341340 MtrunA17_Chr8g0368291 36.512 430 213 11 17 421 10 404 6.39e-85 265
Msa1341340 MtrunA17_Chr3g0129891 38.814 371 153 7 54 422 82 380 1.76e-84 263
Msa1341340 MtrunA17_Chr2g0326371 47.351 302 119 10 142 421 76 359 1.88e-77 244
Msa1341340 MtrunA17_Chr3g0135381 35.885 418 227 9 31 419 29 434 3.01e-77 247
Msa1341340 MtrunA17_Chr8g0368181 57.714 175 73 1 247 421 19 192 3.91e-72 224
Msa1341340 MtrunA17_Chr3g0135371 34.694 441 225 12 14 420 21 432 6.58e-72 232
Msa1341340 MtrunA17_Chr8g0368221 44.094 254 103 7 58 297 30 258 1.94e-63 205
Msa1341340 MtrunA17_Chr8g0368361 45.198 177 94 2 247 421 19 194 1.38e-57 187
Msa1341340 MtrunA17_Chr1g0151871 34.568 324 164 8 120 421 29 326 8.69e-56 187
Msa1341340 MtrunA17_Chr3g0135401 35.952 331 169 9 123 419 26 347 4.31e-55 186
Msa1341340 MtrunA17_Chr8g0368331 35.252 278 128 5 191 421 13 285 7.27e-55 183
Msa1341340 MtrunA17_Chr8g0368281 44.886 176 96 1 247 421 19 194 6.08e-54 178
Msa1341340 MtrunA17_Chr3g0135441 40.090 222 128 3 200 419 10 228 7.89e-52 174
Msa1341340 MtrunA17_Chr8g0368231 57.258 124 53 0 298 421 8 131 9.27e-49 162
Msa1341340 MtrunA17_Chr8g0368351 39.565 230 105 7 34 263 63 258 1.21e-42 150
Msa1341340 MtrunA17_Chr8g0368261 51.587 126 59 2 297 421 4 128 1.01e-40 141
Msa1341340 MtrunA17_Chr3g0138811 27.470 415 235 13 26 418 16 386 1.79e-39 145
Msa1341340 MtrunA17_Chr2g0302691 31.135 379 184 16 68 416 37 368 8.52e-36 135
Msa1341340 MtrunA17_Chr3g0135431 34.728 239 131 5 17 247 16 237 1.22e-32 127
Msa1341340 MtrunA17_Chr8g0368381 50.000 96 48 0 247 342 19 114 4.38e-32 118
Msa1341340 MtrunA17_Chr8g0339871 34.000 250 127 12 202 422 2 242 1.60e-30 117
Msa1341340 MtrunA17_Chr2g0302651 36.946 203 110 9 225 416 1 196 1.49e-27 108
Msa1341340 MtrunA17_Chr5g0445181 31.183 279 131 12 98 357 61 297 1.04e-24 103
Msa1341340 MtrunA17_Chr8g0391201 31.381 239 131 10 204 416 4 235 1.19e-24 101
Msa1341340 MtrunA17_Chr8g0368171 30.380 237 117 7 17 248 10 203 3.55e-24 99.4
Msa1341340 MtrunA17_Chr3g0135451 37.107 159 85 4 17 167 8 159 2.13e-23 97.1
Msa1341340 MtrunA17_Chr8g0353971 34.104 173 106 4 248 416 2 170 2.43e-22 93.6
Msa1341340 MtrunA17_Chr5g0426971 33.523 176 109 6 200 375 46 213 3.91e-22 95.1
Msa1341340 MtrunA17_Chr8g0353931 31.579 228 119 11 30 248 3 202 8.25e-22 92.8
Msa1341340 MtrunA17_Chr8g0353941 32.258 186 116 5 237 418 3 182 1.40e-21 91.7
Msa1341340 MtrunA17_Chr8g0368321 42.105 114 49 3 54 167 46 142 3.00e-21 90.5
Msa1341340 MtrunA17_Chr8g0368271 41.228 114 55 2 54 167 52 153 2.90e-20 88.6
Msa1341340 MtrunA17_Chr5g0434771 34.932 146 88 4 256 399 24 164 2.60e-19 85.5
Msa1341340 MtrunA17_Chr8g0353961 34.783 138 74 4 30 161 3 130 1.29e-17 79.7
Msa1341340 MtrunA17_Chr3g0135411 55.738 61 26 1 42 101 52 112 2.17e-12 63.5
Msa1341340 MtrunA17_Chr2g0302771 48.485 66 31 2 204 269 4 66 2.22e-11 60.8
Msa1341340 MtrunA17_Chr2g0302741 42.683 82 42 3 204 283 4 82 4.28e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341340 AT5G18460.1 67.822 404 105 5 38 422 33 430 0.0 551
Msa1341340 AT1G55360.1 51.395 430 176 9 11 421 6 421 2.78e-155 446
Msa1341340 AT3G13510.1 51.313 419 169 9 23 421 15 418 6.69e-154 442
Msa1341340 AT5G56530.2 50.465 430 179 8 11 421 5 419 4.41e-151 435
Msa1341340 AT5G56530.1 50.465 430 179 8 11 421 5 419 4.41e-151 435
Msa1341340 AT1G10750.1 54.615 390 135 6 50 421 101 466 3.02e-146 424
Msa1341340 AT1G23340.2 51.064 423 161 10 17 421 14 408 1.10e-145 421
Msa1341340 AT1G23340.1 51.064 423 161 10 17 421 14 408 1.10e-145 421
Msa1341340 AT5G50150.1 51.990 402 151 7 39 421 41 419 3.74e-143 415
Msa1341340 AT1G70550.1 53.590 390 139 9 50 421 99 464 3.85e-141 411
Msa1341340 AT2G44210.1 51.031 388 165 7 53 421 33 414 4.28e-140 407
Msa1341340 AT2G44210.2 47.368 418 165 8 53 421 33 444 5.57e-134 392
Msa1341340 AT2G44220.1 41.844 423 203 8 18 421 4 402 6.43e-119 352
Msa1341340 AT3G48230.1 47.917 384 158 10 58 421 11 372 5.04e-118 349
Msa1341340 AT2G17750.1 42.785 395 188 10 45 421 21 395 3.87e-111 332
Msa1341340 AT2G19360.1 40.682 440 203 8 19 422 9 426 1.27e-110 332
Msa1341340 AT2G44240.1 40.706 425 204 11 18 421 4 401 3.36e-109 327
Msa1341340 AT2G44250.1 39.252 428 217 11 17 421 1 408 1.79e-95 293
Msa1341340 AT5G19170.1 40.351 399 186 9 46 422 1 369 2.72e-94 289
Msa1341340 AT1G23340.3 48.897 272 95 9 44 297 39 284 2.50e-78 244
Msa1341340 AT2G44250.2 40.299 335 166 11 111 421 1 325 2.48e-71 228
Msa1341340 AT2G20170.3 36.049 405 215 14 22 416 9 379 1.32e-68 223
Msa1341340 AT5G25950.1 36.250 400 211 11 54 421 44 431 1.18e-67 221
Msa1341340 AT2G20170.1 34.597 422 215 15 22 416 9 396 1.44e-64 213
Msa1341340 AT2G20170.2 34.597 422 215 15 22 416 9 396 1.44e-64 213
Msa1341340 AT4G23370.1 32.381 420 231 14 25 416 7 401 5.63e-62 206
Msa1341340 AT4G23390.1 32.812 384 206 12 58 416 41 397 2.26e-57 194
Msa1341340 AT4G23365.1 30.846 402 225 14 41 416 24 398 6.16e-56 190
Msa1341340 AT5G25960.1 34.615 390 175 11 54 421 25 356 1.96e-54 185
Msa1341340 AT4G23355.1 31.043 393 222 14 47 416 32 398 1.97e-53 183
Msa1341340 AT4G23350.1 30.000 400 233 12 41 416 24 400 1.69e-52 181
Msa1341340 AT1G10750.2 50.000 200 76 6 50 249 101 276 1.95e-52 179
Msa1341340 AT4G23360.1 30.846 402 226 15 41 416 24 399 3.20e-51 177
Msa1341340 AT4G23380.1 30.025 393 215 13 52 416 38 398 8.13e-49 171
Msa1341340 AT1G70550.2 47.739 199 80 8 50 248 99 273 3.51e-48 166
Msa1341340 AT2G35250.1 31.707 369 174 14 75 418 24 339 1.22e-37 140
Msa1341340 AT1G10190.1 28.878 419 254 17 19 417 1 395 1.10e-35 135
Msa1341340 AT4G15050.1 28.463 397 242 15 39 417 23 395 3.87e-35 134
Msa1341340 AT4G17505.1 28.418 373 179 12 66 419 18 321 3.28e-34 130
Msa1341340 AT2G24950.1 28.412 447 248 23 6 417 1 410 3.14e-33 129
Msa1341340 AT2G27320.1 31.464 321 151 11 77 377 30 301 6.21e-32 124
Msa1341340 AT4G15053.1 29.581 382 230 15 54 417 42 402 2.17e-31 124
Msa1341340 AT4G10220.1 28.646 384 222 16 53 416 47 398 2.39e-31 124
Msa1341340 AT5G25410.1 27.056 377 212 12 62 416 28 363 2.59e-30 120
Msa1341340 AT4G23373.1 29.924 264 125 5 25 271 7 227 3.65e-30 119
Msa1341340 AT5G60380.1 26.330 376 214 14 65 416 31 367 3.69e-29 117
Msa1341340 AT5G05030.1 27.720 386 208 15 59 418 19 359 6.63e-29 116
Msa1341340 AT5G46200.1 26.750 400 217 17 77 421 30 408 2.04e-28 116
Msa1341340 AT5G46810.1 27.717 368 208 16 78 416 11 349 7.93e-27 110
Msa1341340 AT5G46820.1 27.596 366 203 13 78 416 17 347 8.10e-26 107
Msa1341340 AT4G17860.1 25.867 375 198 18 78 421 29 354 8.25e-22 96.3
Msa1341340 AT4G10210.1 25.416 421 254 17 6 401 1 386 1.30e-21 96.3
Msa1341340 AT4G23080.1 27.342 395 223 18 53 418 47 406 6.32e-21 94.4
Msa1341340 AT5G11660.1 27.393 303 174 12 139 418 25 304 5.32e-20 90.5
Msa1341340 AT2G03930.2 64.407 59 21 0 190 248 42 100 2.50e-18 82.4
Msa1341340 AT2G38255.1 30.263 228 97 7 78 287 14 197 2.18e-17 81.3
Msa1341340 AT5G37520.1 31.776 214 122 11 209 416 2 197 2.97e-17 80.1
Msa1341340 AT5G25415.1 32.184 174 101 5 256 418 165 332 6.60e-17 81.6

Find 168 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAAATTTGGATTCTTTC+TGG 0.084366 tig0004828:+60675 Msa1341340:CDS
AATTTAGTCTTTCTCAAATT+TGG 0.102248 tig0004828:+60664 Msa1341340:CDS
CATTGTTTGGTTTATTTGTT+TGG 0.151929 tig0004828:+57796 Msa1341340:five_prime_UTR
TGTCTTAAATATTGTATTAA+TGG 0.166742 tig0004828:-57687 None:intergenic
GGTTTATTTGTTTGGGTATA+TGG 0.197181 tig0004828:+57804 Msa1341340:five_prime_UTR
GCTAAATCTTTGTATGAATA+TGG 0.199278 tig0004828:+59932 Msa1341340:CDS
CTCTAATAATTGTTTGTAAA+AGG 0.210392 tig0004828:-58017 None:intergenic
TGGATTCTTTCTGGATCTTT+TGG 0.225879 tig0004828:+60684 Msa1341340:CDS
TCGCCGTTATTAACAACTTC+AGG 0.268540 tig0004828:-60001 None:intergenic
TGTTTGGGTATATGGTAAAA+TGG 0.269322 tig0004828:+57812 Msa1341340:five_prime_UTR
TTGGACAACGTGTCCCATTT+TGG 0.271651 tig0004828:-59862 None:intergenic
TGGCAAATGTGGCACCAAAA+TGG 0.279621 tig0004828:+59848 Msa1341340:CDS
TGGCGTTGAAAGAGAAATTA+TGG 0.285107 tig0004828:+57924 Msa1341340:exon
TTTCTTGAGAGGAAGAAAAT+AGG 0.292445 tig0004828:-57750 None:intergenic
GCGATTGCGTTCACAAAATC+AGG 0.309262 tig0004828:+60576 Msa1341340:CDS
TTTGGTGACGGCACATTGAT+AGG 0.315027 tig0004828:+61670 Msa1341340:CDS
ATTGTTTGGTTTATTTGTTT+GGG 0.331356 tig0004828:+57797 Msa1341340:five_prime_UTR
CACTTTGCTGAAGATGGCTT+TGG 0.334222 tig0004828:+61814 Msa1341340:CDS
TTTACCTATTTCTTCTCTCT+TGG 0.342556 tig0004828:+57904 Msa1341340:five_prime_UTR
TTGGAAAAGCAAGCTACTTC+AGG 0.347824 tig0004828:+61833 Msa1341340:CDS
GCCTATACTTCGTGTAGTTT+AGG 0.363508 tig0004828:-58053 None:intergenic
TCCGGCCACTTTGCTGAAGA+TGG 0.363622 tig0004828:+61808 Msa1341340:CDS
AAATTTGCGGTTGGCATGGC+TGG 0.366473 tig0004828:-57461 None:intergenic
CAAAGTAAATCTAACTTTCA+TGG 0.373663 tig0004828:-57841 None:intergenic
ATAAGAAGAGAGAGGAGAAA+TGG 0.388996 tig0004828:-61458 None:intergenic
CCAACACACCTCCACTCAAA+TGG 0.398678 tig0004828:+61783 Msa1341340:CDS
GTATATAATTAAGTACTAAC+TGG 0.400602 tig0004828:-62038 None:intergenic
AGAGCTCCTACAACAACAAA+TGG 0.403956 tig0004828:+61944 Msa1341340:CDS
CCGTGCCACCATGGTGCAAT+GGG 0.411264 tig0004828:+61729 Msa1341340:CDS
TTGAATGCATAAAACATGAT+TGG 0.414562 tig0004828:+62214 Msa1341340:three_prime_UTR
GCATAAAACATGATTGGAAA+TGG 0.416691 tig0004828:+62220 Msa1341340:three_prime_UTR
GTATATGATAGTAGTAATAA+TGG 0.420648 tig0004828:-57576 None:intergenic
ATAATATTACCTCTATAGTT+AGG 0.422015 tig0004828:-58140 None:intergenic
GGCAAATGTGGCACCAAAAT+GGG 0.428900 tig0004828:+59849 Msa1341340:CDS
ATAAACCTTCCAGATGAGTA+TGG 0.431310 tig0004828:-61503 None:intergenic
CGCCGTTATTAACAACTTCA+GGG 0.431464 tig0004828:-60000 None:intergenic
AAATAAACCAAACAATGAAA+AGG 0.432690 tig0004828:-57790 None:intergenic
AAATCAGGGGAAGAGGTGTA+TGG 0.433416 tig0004828:+60591 Msa1341340:CDS
GGGAACTGGTGGATGAGATT+TGG 0.437839 tig0004828:+61652 Msa1341340:CDS
TGTGCCCCATTTGTTGTTGT+AGG 0.439039 tig0004828:-61950 None:intergenic
ATATTCATATCCATTCCCTT+TGG 0.441719 tig0004828:-59776 None:intergenic
GGCAGAAACAAGAATGGAAA+TGG 0.447953 tig0004828:-62167 None:intergenic
GAGCATTGTGGATTGTTGCC+AGG 0.452796 tig0004828:-61991 None:intergenic
TCAAGGTTGCACAAACGTTA+AGG 0.453406 tig0004828:-57501 None:intergenic
TGTTACAACCTTCTTTGTGC+TGG 0.454246 tig0004828:+61397 Msa1341340:CDS
GAGCTCCTACAACAACAAAT+GGG 0.454693 tig0004828:+61945 Msa1341340:CDS
AACGCCAAGAGAGAAGAAAT+AGG 0.456202 tig0004828:-57908 None:intergenic
ACCGTGCCACCATGGTGCAA+TGG 0.460883 tig0004828:+61728 Msa1341340:CDS
GCTGATTGCATTACTAGTAT+TGG 0.461023 tig0004828:+57865 Msa1341340:five_prime_UTR
AGGATCCACAACTTGGGAAC+TGG 0.461610 tig0004828:+61638 Msa1341340:intron
AGTGACACATATCAAGCAAC+TGG 0.463842 tig0004828:+61373 Msa1341340:CDS
ATTCCCTTTGGCATCGTCGT+TGG 0.464017 tig0004828:-59764 None:intergenic
CTAAATCTTTGTATGAATAT+GGG 0.468256 tig0004828:+59933 Msa1341340:CDS
AGTGGAGGTGTGTTGGCCAT+TGG 0.481123 tig0004828:-61776 None:intergenic
TTTAAAGAATCACAAAATCC+AGG 0.482298 tig0004828:+58383 Msa1341340:CDS
TTTATGATGCTAGCTGTTCA+AGG 0.482412 tig0004828:-57518 None:intergenic
TTGACATCACCATACTCATC+TGG 0.484373 tig0004828:+61494 Msa1341340:CDS
ATTGATTAGGATCCACAACT+TGG 0.486292 tig0004828:+61631 Msa1341340:intron
TCATTGACTACTTCCACCGT+TGG 0.487439 tig0004828:-60642 None:intergenic
CAACACACCTCCACTCAAAT+GGG 0.487631 tig0004828:+61784 Msa1341340:CDS
TAGCATTGAAGCTGGTTGGC+AGG 0.488190 tig0004828:+60722 Msa1341340:CDS
AATGGGACACGTTGTCCAAA+GGG 0.489971 tig0004828:+59866 Msa1341340:CDS
AATAAACCAAACAATGAAAA+GGG 0.491298 tig0004828:-57789 None:intergenic
GATGAGAGAAGTGGTAAGAG+TGG 0.497824 tig0004828:+59818 Msa1341340:CDS
AATCAGGGGAAGAGGTGTAT+GGG 0.502251 tig0004828:+60592 Msa1341340:CDS
TGAGGAAAGGATGGTGGGTG+AGG 0.502471 tig0004828:-57664 None:intergenic
TTAATAGCATTGAAGCTGGT+TGG 0.503786 tig0004828:+60718 Msa1341340:CDS
TGCACCGTGCTCCGCCGTAT+CGG 0.505620 tig0004828:-59896 None:intergenic
ATCCACCAGTTCCCAAGTTG+TGG 0.508328 tig0004828:-61643 None:intergenic
GTGGTGAACACTCGCGCCAA+TGG 0.510609 tig0004828:+61760 Msa1341340:CDS
AGCAAGAAGAAGATGAGGAG+TGG 0.515521 tig0004828:-57980 None:intergenic
TTGCACAAACGTTAAGGAGA+TGG 0.515856 tig0004828:-57495 None:intergenic
ACCTCCACTCAAATGGGTTC+CGG 0.515882 tig0004828:+61790 Msa1341340:CDS
CGTATCGGTACAGTTCCCTT+TGG 0.516871 tig0004828:-59881 None:intergenic
ATTACCTCTATAGTTAGGAC+AGG 0.517511 tig0004828:-58135 None:intergenic
CTGAGCTAAGGTTAAGATGT+TGG 0.520594 tig0004828:-61899 None:intergenic
CATGGTGCAATGGGGTGGCG+AGG 0.521629 tig0004828:+61738 Msa1341340:CDS
AATAATTGTTTGTAAAAGGA+AGG 0.522506 tig0004828:-58013 None:intergenic
TCTAGAGGAGATGAGAGAAG+TGG 0.524587 tig0004828:+59809 Msa1341340:CDS
AACGACGATGCCAAAGGGAA+TGG 0.525654 tig0004828:+59766 Msa1341340:CDS
GCACAAAACCAGCACAAAGA+AGG 0.529315 tig0004828:-61405 None:intergenic
TTGTTACTTCAGAGTCAAGA+TGG 0.529370 tig0004828:+58306 Msa1341340:intron
ACAAATAGCAAGATAGCCAT+TGG 0.530075 tig0004828:+61430 Msa1341340:CDS
TGCACAAACGTTAAGGAGAT+GGG 0.532098 tig0004828:-57494 None:intergenic
CGCCGAGGTGAGACTGTTGT+CGG 0.532408 tig0004828:-61875 None:intergenic
GCCATCTTCAGCAAAGTGGC+CGG 0.534756 tig0004828:-61809 None:intergenic
TTGCACCATGGTGGCACGGT+CGG 0.535296 tig0004828:-61725 None:intergenic
GAAAGAGAAATAGAAAGAGA+AGG 0.537513 tig0004828:+57716 Msa1341340:five_prime_UTR
TTAGCTAAGAGAGACCCTCT+TGG 0.539344 tig0004828:-57629 None:intergenic
CCCATTGCACCATGGTGGCA+CGG 0.539729 tig0004828:-61729 None:intergenic
ATTAATACAATATTTAAGAC+AGG 0.539849 tig0004828:+57689 Msa1341340:five_prime_UTR
AAGAAAGCAAGAAGAAGATG+AGG 0.541340 tig0004828:-57985 None:intergenic
TAAATATTGTATTAATGGTG+AGG 0.541813 tig0004828:-57682 None:intergenic
TAATGGTGAGGAAAGGATGG+TGG 0.542775 tig0004828:-57670 None:intergenic
TTAGTAGTTTGAGACTTGAA+AGG 0.545306 tig0004828:+58079 Msa1341340:CDS
TTGGTGACGGCACATTGATA+GGG 0.548675 tig0004828:+61671 Msa1341340:CDS
TTGAGAGGAAGAAAATAGGA+AGG 0.548794 tig0004828:-57746 None:intergenic
AGAGAAATTTGCGGTTGGCA+TGG 0.550112 tig0004828:-57465 None:intergenic
AGCATTGTGGATTGTTGCCA+GGG 0.551399 tig0004828:-61990 None:intergenic
GATCTTAATAGCATTGAAGC+TGG 0.552923 tig0004828:+60714 Msa1341340:CDS
ACCTAAACTACACGAAGTAT+AGG 0.555495 tig0004828:+58052 Msa1341340:CDS
CAAAGCCATCTTCAGCAAAG+TGG 0.555709 tig0004828:-61813 None:intergenic
ACGGCACATTGATAGGGTAC+TGG 0.556765 tig0004828:+61677 Msa1341340:CDS
GGTGCAATGGGGTGGCGAGG+TGG 0.560849 tig0004828:+61741 Msa1341340:CDS
AGGAGAAATGGAAGCTCCAA+TGG 0.564350 tig0004828:-61446 None:intergenic
ACAAACAAGAAGGACGGAAG+TGG 0.564408 tig0004828:-62188 None:intergenic
AACATGAAGCTAAGATGACT+TGG 0.565165 tig0004828:-62102 None:intergenic
TATGGTGATGTCAAATTGCT+TGG 0.565653 tig0004828:-61485 None:intergenic
TATTAATGGTGAGGAAAGGA+TGG 0.568483 tig0004828:-57673 None:intergenic
CCATTTGAGTGGAGGTGTGT+TGG 0.568898 tig0004828:-61783 None:intergenic
AGGCCAACGACGATGCCAAA+GGG 0.574441 tig0004828:+59761 Msa1341340:CDS
AAATGGGACACGTTGTCCAA+AGG 0.575071 tig0004828:+59865 Msa1341340:CDS
CGATTGCGTTCACAAAATCA+GGG 0.576262 tig0004828:+60577 Msa1341340:CDS
GTTCACAAAATCAGGGGAAG+AGG 0.576386 tig0004828:+60584 Msa1341340:CDS
AAGGCCAACGACGATGCCAA+AGG 0.577437 tig0004828:+59760 Msa1341340:CDS
ATCCACAACTTGGGAACTGG+TGG 0.577654 tig0004828:+61641 Msa1341340:CDS
TTGATTAGGATCCACAACTT+GGG 0.578524 tig0004828:+61632 Msa1341340:intron
AAAAGCAACAATAAATGTGT+GGG 0.580116 tig0004828:+60617 Msa1341340:CDS
AATAAATGTGTGGGATCCAA+CGG 0.581407 tig0004828:+60626 Msa1341340:CDS
ATTGTATTAATGGTGAGGAA+AGG 0.583949 tig0004828:-57677 None:intergenic
CAAAAGCAACAATAAATGTG+TGG 0.585339 tig0004828:+60616 Msa1341340:CDS
AAGTGTGTGAATAACTCCAC+TGG 0.587412 tig0004828:-61700 None:intergenic
GGAAGTGGCAGAAACAAGAA+TGG 0.590112 tig0004828:-62173 None:intergenic
AATATTAATGAAGAGTCTAG+AGG 0.592197 tig0004828:+59794 Msa1341340:CDS
AGAAAAGAGAAATTTGCGGT+TGG 0.593162 tig0004828:-57470 None:intergenic
TGTCGGTGTCTACAATCTCA+AGG 0.593806 tig0004828:-61858 None:intergenic
CTTAGCCGACCGTGCCACCA+TGG 0.594227 tig0004828:+61720 Msa1341340:CDS
ACCTCTATAGTTAGGACAGG+GGG 0.594543 tig0004828:-58132 None:intergenic
GGGAAGAAAAGAGAAATTTG+CGG 0.594832 tig0004828:-57474 None:intergenic
AATGGTGAGGAAAGGATGGT+GGG 0.599351 tig0004828:-57669 None:intergenic
CTCGCCACCCCATTGCACCA+TGG 0.599661 tig0004828:-61737 None:intergenic
GCCACCATGGTGCAATGGGG+TGG 0.599972 tig0004828:+61733 Msa1341340:CDS
CATTCAATCAACAAACAAGA+AGG 0.601184 tig0004828:-62198 None:intergenic
CCGTTATTAACAACTTCAGG+GGG 0.604223 tig0004828:-59998 None:intergenic
GAAGTTGTTAATAACGGCGA+AGG 0.604884 tig0004828:+60004 Msa1341340:CDS
CAAAGGGAACTGTACCGATA+CGG 0.605213 tig0004828:+59882 Msa1341340:CDS
TGAGACTTGAAAGGATTCAG+AGG 0.607933 tig0004828:+58088 Msa1341340:CDS
GGTTAAGATGTTGGTCGCCG+AGG 0.610177 tig0004828:-61890 None:intergenic
TGGACACTATTATTGTTGAG+AGG 0.613110 tig0004828:+57944 Msa1341340:CDS
ATTGATAGGGTACTGGCCAG+TGG 0.614292 tig0004828:+61684 Msa1341340:CDS
TGTACCGATACGGCGGAGCA+CGG 0.614700 tig0004828:+59892 Msa1341340:CDS
TCGTTGCGACGGAATAAAAG+TGG 0.617469 tig0004828:-59974 None:intergenic
TTACCTCTATAGTTAGGACA+GGG 0.618276 tig0004828:-58134 None:intergenic
GCCGGAACCCATTTGAGTGG+AGG 0.619376 tig0004828:-61791 None:intergenic
CATCACCATACTCATCTGGA+AGG 0.620289 tig0004828:+61498 Msa1341340:CDS
AAATTGGGGAAAATTCAGCT+TGG 0.622599 tig0004828:-62274 None:intergenic
CAATCAACAAACAAGAAGGA+CGG 0.625186 tig0004828:-62194 None:intergenic
GTGGTGTGGCATGGCAAATG+TGG 0.628794 tig0004828:+59837 Msa1341340:CDS
AGTGATGATCACGAGCATTG+TGG 0.630196 tig0004828:-62003 None:intergenic
GTGGCCGGAACCCATTTGAG+TGG 0.633212 tig0004828:-61794 None:intergenic
ATCAGGGGAAGAGGTGTATG+GGG 0.633285 tig0004828:+60593 Msa1341340:CDS
GCCGTTATTAACAACTTCAG+GGG 0.633552 tig0004828:-59999 None:intergenic
GTGGTAAGAGTGGTGTGGCA+TGG 0.656278 tig0004828:+59828 Msa1341340:CDS
GCCACCCCATTGCACCATGG+TGG 0.657695 tig0004828:-61734 None:intergenic
TCATAACATGATAGTCCAAG+AGG 0.660472 tig0004828:+57614 Msa1341340:five_prime_UTR
CATAACATGATAGTCCAAGA+GGG 0.666154 tig0004828:+57615 Msa1341340:five_prime_UTR
TTGGCATTATAAGAAGAGAG+AGG 0.666431 tig0004828:-61466 None:intergenic
GAGAAGTGGTAAGAGTGGTG+TGG 0.676091 tig0004828:+59823 Msa1341340:CDS
AGCTCCTACAACAACAAATG+GGG 0.676238 tig0004828:+61946 Msa1341340:CDS
CACCGACAACAGTCTCACCT+CGG 0.681380 tig0004828:+61873 Msa1341340:CDS
AAATGTGTGGGATCCAACGG+TGG 0.688543 tig0004828:+60629 Msa1341340:CDS
TAATAACGGCGAAGGCCATG+AGG 0.692332 tig0004828:+60012 Msa1341340:CDS
AGGGAACTGTACCGATACGG+CGG 0.708061 tig0004828:+59885 Msa1341340:CDS
GATTGCGTTCACAAAATCAG+GGG 0.725289 tig0004828:+60578 Msa1341340:CDS
CGTGCCACCATGGTGCAATG+GGG 0.727705 tig0004828:+61730 Msa1341340:CDS
TGGTGGATGAGATTTGGTGA+CGG 0.732995 tig0004828:+61658 Msa1341340:CDS
TACCTCTATAGTTAGGACAG+GGG 0.733427 tig0004828:-58133 None:intergenic
AATATGGGAAGAAACAACGA+CGG 0.747260 tig0004828:+59948 Msa1341340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAATATAAATAAATT+AGG + tig0004828:60207-60226 Msa1341340:intron 0.0%
!! TTATAAATATAAATAAATTA+GGG + tig0004828:60208-60227 Msa1341340:intron 0.0%
!!! TATAAATTTTTTAACAGAAA+AGG + tig0004828:59741-59760 Msa1341340:intron 10.0%
!! TGTCTTAAATATTGTATTAA+TGG - tig0004828:57690-57709 None:intergenic 15.0%
!!! ATTAATACAATATTTAAGAC+AGG + tig0004828:57689-57708 Msa1341340:five_prime_UTR 15.0%
!! TAATGAACATATAAGAATAA+AGG - tig0004828:58262-58281 None:intergenic 15.0%
!!! ATTTTGTGATTCTTTAAAAA+GGG - tig0004828:58381-58400 None:intergenic 15.0%
!! GAATTATATACTATGAAATA+TGG + tig0004828:58766-58785 Msa1341340:intron 15.0%
!!! CTTTCAATTTAAAATGATTT+AGG + tig0004828:59152-59171 Msa1341340:intron 15.0%
!! GTATTTAAATGTATATTTCA+TGG - tig0004828:59613-59632 None:intergenic 15.0%
!!! ATTCATTTGTATTTATTTCT+TGG + tig0004828:59651-59670 Msa1341340:intron 15.0%
!! TTATATTTATAAATGCGATA+TGG - tig0004828:60200-60219 None:intergenic 15.0%
!!! TTAGAAAATATTTCTTCTTT+TGG + tig0004828:60370-60389 Msa1341340:intron 15.0%
!!! TAGAAAATATTTCTTCTTTT+GGG + tig0004828:60371-60390 Msa1341340:intron 15.0%
!! AAGAATTACTACTAATTTAT+GGG - tig0004828:60435-60454 None:intergenic 15.0%
!! AAAGAATTACTACTAATTTA+TGG - tig0004828:60436-60455 None:intergenic 15.0%
!! ATATTGTTTAAATAATTGAG+AGG + tig0004828:60501-60520 Msa1341340:intron 15.0%
!!! TTAGACTATAATCTTTTTTT+TGG - tig0004828:60796-60815 None:intergenic 15.0%
!!! CATTTGATTTTTTATTTGTT+TGG + tig0004828:61252-61271 Msa1341340:intron 15.0%
!! GTATATGATAGTAGTAATAA+TGG - tig0004828:57579-57598 None:intergenic 20.0%
!! TAAATATTGTATTAATGGTG+AGG - tig0004828:57685-57704 None:intergenic 20.0%
!! AATAAACCAAACAATGAAAA+GGG - tig0004828:57792-57811 None:intergenic 20.0%
!! AAATAAACCAAACAATGAAA+AGG - tig0004828:57793-57812 None:intergenic 20.0%
!!! ATTGTTTGGTTTATTTGTTT+GGG + tig0004828:57797-57816 Msa1341340:five_prime_UTR 20.0%
!! AATAATTGTTTGTAAAAGGA+AGG - tig0004828:58016-58035 None:intergenic 20.0%
!! CTCTAATAATTGTTTGTAAA+AGG - tig0004828:58020-58039 None:intergenic 20.0%
!! ATAATATTACCTCTATAGTT+AGG - tig0004828:58143-58162 None:intergenic 20.0%
!! ACAACAATATATATATAGCT+AGG - tig0004828:58235-58254 None:intergenic 20.0%
!!! TTTTGTGATTCTTTAAAAAG+GGG - tig0004828:58380-58399 None:intergenic 20.0%
!!! GATTTTGTGATTCTTTAAAA+AGG - tig0004828:58382-58401 None:intergenic 20.0%
!! TATATTTCATCACACATATA+TGG + tig0004828:58408-58427 Msa1341340:intron 20.0%
!! GGGACAAATTTATAATATTA+AGG - tig0004828:58503-58522 None:intergenic 20.0%
!! TTATATACTATGAAATATGG+TGG + tig0004828:58769-58788 Msa1341340:intron 20.0%
!! TCAGATTAATTTAAAAGGTT+TGG + tig0004828:58848-58867 Msa1341340:intron 20.0%
!!! ATCATTTTAAATTGAAAGCA+AGG - tig0004828:59150-59169 None:intergenic 20.0%
!!! AAGGATAATAACTTGTTAAA+GGG + tig0004828:59406-59425 Msa1341340:intron 20.0%
!! TTTAAATGTATATTTCATGG+TGG - tig0004828:59610-59629 None:intergenic 20.0%
!!! TATTTATTTCTTGGTTTGAA+AGG + tig0004828:59660-59679 Msa1341340:intron 20.0%
!! CTAAATCTTTGTATGAATAT+GGG + tig0004828:59933-59952 Msa1341340:CDS 20.0%
!!! TTTGCTCTAAATTTTTCTTA+AGG + tig0004828:60098-60117 Msa1341340:intron 20.0%
!! AATTGAGAGGAAAATAATTA+AGG + tig0004828:60514-60533 Msa1341340:intron 20.0%
!!! AATTTAGTCTTTCTCAAATT+TGG + tig0004828:60664-60683 Msa1341340:CDS 20.0%
!!! TATAATCTGAAATTGAAGAT+TGG - tig0004828:60764-60783 None:intergenic 20.0%
!!! TGATTTTTTATTTGTTTGGT+TGG + tig0004828:61256-61275 Msa1341340:intron 20.0%
!!! GATTTTTTATTTGTTTGGTT+GGG + tig0004828:61257-61276 Msa1341340:intron 20.0%
!!! TTCTCAATTACTTATTGATT+AGG + tig0004828:61618-61637 Msa1341340:intron 20.0%
!! GTATATAATTAAGTACTAAC+TGG - tig0004828:62041-62060 None:intergenic 20.0%
!! CATTGTTTGGTTTATTTGTT+TGG + tig0004828:57796-57815 Msa1341340:five_prime_UTR 25.0%
! CAAAGTAAATCTAACTTTCA+TGG - tig0004828:57844-57863 None:intergenic 25.0%
! TTTAAAGAATCACAAAATCC+AGG + tig0004828:58383-58402 Msa1341340:CDS 25.0%
! TTATAATATTAAGGAATGCC+AGG - tig0004828:58494-58513 None:intergenic 25.0%
!!! TCCTTTTTTTTTTTTGCTGT+TGG + tig0004828:58617-58636 Msa1341340:intron 25.0%
! ACCAACAGCAAAAAAAAAAA+AGG - tig0004828:58621-58640 None:intergenic 25.0%
!!! TTTTTTTTGCTGTTGGTTTT+TGG + tig0004828:58624-58643 Msa1341340:intron 25.0%
! ATATTATATGACGCAGTATA+AGG - tig0004828:58676-58695 None:intergenic 25.0%
!! ACAAGTTAGTGACATTATTT+TGG - tig0004828:58710-58729 None:intergenic 25.0%
! TGTCGTCAGATTAATTTAAA+AGG + tig0004828:58843-58862 Msa1341340:intron 25.0%
! ATGCTTAGATATGGAATTAA+GGG - tig0004828:59095-59114 None:intergenic 25.0%
! AATGCTTAGATATGGAATTA+AGG - tig0004828:59096-59115 None:intergenic 25.0%
! TTTCATGAAATGCTTAGATA+TGG - tig0004828:59104-59123 None:intergenic 25.0%
! GATGTGAATATGATAACTAT+AGG - tig0004828:59258-59277 None:intergenic 25.0%
!!! ACCATTTGAGATGTATTTTA+TGG - tig0004828:59355-59374 None:intergenic 25.0%
! ATAAAATACATCTCAAATGG+TGG + tig0004828:59354-59373 Msa1341340:intron 25.0%
!!! CAAGGATAATAACTTGTTAA+AGG + tig0004828:59405-59424 Msa1341340:intron 25.0%
! AATATTAATGAAGAGTCTAG+AGG + tig0004828:59794-59813 Msa1341340:CDS 25.0%
! GCTAAATCTTTGTATGAATA+TGG + tig0004828:59932-59951 Msa1341340:CDS 25.0%
! TAATAATAATACACACCTCA+TGG - tig0004828:60030-60049 None:intergenic 25.0%
!! CTAAATTTTTCTTAAGGCAA+TGG + tig0004828:60104-60123 Msa1341340:intron 25.0%
! TAACTACTATCCATTTATGT+TGG + tig0004828:60156-60175 Msa1341340:intron 25.0%
!! TAGTAGTAATTCTTTTCGTT+TGG + tig0004828:60441-60460 Msa1341340:intron 25.0%
! AAAAGCAACAATAAATGTGT+GGG + tig0004828:60617-60636 Msa1341340:CDS 25.0%
! TTGAATGCATAAAACATGAT+TGG + tig0004828:62214-62233 Msa1341340:three_prime_UTR 25.0%
ATTGTATTAATGGTGAGGAA+AGG - tig0004828:57680-57699 None:intergenic 30.0%
GAAAGAGAAATAGAAAGAGA+AGG + tig0004828:57716-57735 Msa1341340:five_prime_UTR 30.0%
TTTCTTGAGAGGAAGAAAAT+AGG - tig0004828:57753-57772 None:intergenic 30.0%
! CAATTTCCCTTTTCATTGTT+TGG + tig0004828:57783-57802 Msa1341340:five_prime_UTR 30.0%
GGTTTATTTGTTTGGGTATA+TGG + tig0004828:57804-57823 Msa1341340:five_prime_UTR 30.0%
TGTTTGGGTATATGGTAAAA+TGG + tig0004828:57812-57831 Msa1341340:five_prime_UTR 30.0%
! TTTACCTATTTCTTCTCTCT+TGG + tig0004828:57904-57923 Msa1341340:five_prime_UTR 30.0%
! TTAGTAGTTTGAGACTTGAA+AGG + tig0004828:58079-58098 Msa1341340:CDS 30.0%
TGTGTGATGAAATATATACC+TGG - tig0004828:58404-58423 None:intergenic 30.0%
!! ACTAACTACTCATTTTAGAG+GGG - tig0004828:58523-58542 None:intergenic 30.0%
! CACTAACTACTCATTTTAGA+GGG - tig0004828:58524-58543 None:intergenic 30.0%
! ACACTAACTACTCATTTTAG+AGG - tig0004828:58525-58544 None:intergenic 30.0%
ACTACTTCAACTCATTACAA+AGG - tig0004828:58653-58672 None:intergenic 30.0%
! TCATTGTGATAAATTGGTCT+GGG - tig0004828:59034-59053 None:intergenic 30.0%
! AACCTTAAGACTCTTCATTT+TGG + tig0004828:59060-59079 Msa1341340:intron 30.0%
ATGATAACTATAGGAAGTGA+AGG - tig0004828:59249-59268 None:intergenic 30.0%
! GTTATTTCAAACAAGACTGT+AGG - tig0004828:59324-59343 None:intergenic 30.0%
! GAGATGTATTTTATGGCTAT+AGG - tig0004828:59348-59367 None:intergenic 30.0%
GCCATAAAATACATCTCAAA+TGG + tig0004828:59351-59370 Msa1341340:intron 30.0%
TTTGAGCTCGATTAATCTAA+TGG + tig0004828:59521-59540 Msa1341340:intron 30.0%
!! ATATTTCATGGTGGATTCTA+GGG - tig0004828:59601-59620 None:intergenic 30.0%
!! TATATTTCATGGTGGATTCT+AGG - tig0004828:59602-59621 None:intergenic 30.0%
! GAATAGAAAACGTTTTGCTT+TGG - tig0004828:59635-59654 None:intergenic 30.0%
! ATTTCTTGGTTTGAAAGGAA+AGG + tig0004828:59665-59684 Msa1341340:intron 30.0%
! TTTCTTGGTTTGAAAGGAAA+GGG + tig0004828:59666-59685 Msa1341340:intron 30.0%
AATCCAATTAACTTACTCCT+AGG + tig0004828:59694-59713 Msa1341340:intron 30.0%
ATCCAATTAACTTACTCCTA+GGG + tig0004828:59695-59714 Msa1341340:intron 30.0%
AACAAAAACTAATCAACCCT+AGG - tig0004828:59714-59733 None:intergenic 30.0%
ATATTCATATCCATTCCCTT+TGG - tig0004828:59779-59798 None:intergenic 30.0%
CAAAAGCAACAATAAATGTG+TGG + tig0004828:60616-60635 Msa1341340:CDS 30.0%
TCTCAAATTTGGATTCTTTC+TGG + tig0004828:60675-60694 Msa1341340:CDS 30.0%
AGTAATGTTTCTTCTGAACT+TGG - tig0004828:61040-61059 None:intergenic 30.0%
TTCAGAAGAAACATTACTCA+AGG + tig0004828:61042-61061 Msa1341340:intron 30.0%
! CTTTGATAATTGCACTAGTT+AGG + tig0004828:61136-61155 Msa1341340:intron 30.0%
! GCATTTCATCATCTTTTTCT+CGG + tig0004828:61216-61235 Msa1341340:intron 30.0%
CATTCAATCAACAAACAAGA+AGG - tig0004828:62201-62220 None:intergenic 30.0%
GCATAAAACATGATTGGAAA+TGG + tig0004828:62220-62239 Msa1341340:three_prime_UTR 30.0%
AGAAAAGAGAAATTTGCGGT+TGG - tig0004828:57473-57492 None:intergenic 35.0%
GGGAAGAAAAGAGAAATTTG+CGG - tig0004828:57477-57496 None:intergenic 35.0%
TTTATGATGCTAGCTGTTCA+AGG - tig0004828:57521-57540 None:intergenic 35.0%
TCATAACATGATAGTCCAAG+AGG + tig0004828:57614-57633 Msa1341340:five_prime_UTR 35.0%
CATAACATGATAGTCCAAGA+GGG + tig0004828:57615-57634 Msa1341340:five_prime_UTR 35.0%
TATTAATGGTGAGGAAAGGA+TGG - tig0004828:57676-57695 None:intergenic 35.0%
TTGAGAGGAAGAAAATAGGA+AGG - tig0004828:57749-57768 None:intergenic 35.0%
! GAAAAACGACTTTTCTTGAG+AGG - tig0004828:57764-57783 None:intergenic 35.0%
GCTGATTGCATTACTAGTAT+TGG + tig0004828:57865-57884 Msa1341340:five_prime_UTR 35.0%
! TGGCGTTGAAAGAGAAATTA+TGG + tig0004828:57924-57943 Msa1341340:exon 35.0%
TGGACACTATTATTGTTGAG+AGG + tig0004828:57944-57963 Msa1341340:CDS 35.0%
AAGAAAGCAAGAAGAAGATG+AGG - tig0004828:57988-58007 None:intergenic 35.0%
ACCTAAACTACACGAAGTAT+AGG + tig0004828:58052-58071 Msa1341340:CDS 35.0%
TTACCTCTATAGTTAGGACA+GGG - tig0004828:58137-58156 None:intergenic 35.0%
ATTACCTCTATAGTTAGGAC+AGG - tig0004828:58138-58157 None:intergenic 35.0%
! TTGTTACTTCAGAGTCAAGA+TGG + tig0004828:58306-58325 Msa1341340:intron 35.0%
! CTTTAAAAAGGGGTGATCTA+AGG - tig0004828:58370-58389 None:intergenic 35.0%
AATCTGACGACATCTAAAAG+TGG - tig0004828:58835-58854 None:intergenic 35.0%
GTCATTGTGATAAATTGGTC+TGG - tig0004828:59035-59054 None:intergenic 35.0%
ACCAATTTATCACAATGACC+AGG + tig0004828:59036-59055 Msa1341340:intron 35.0%
TCCTGGTCATTGTGATAAAT+TGG - tig0004828:59040-59059 None:intergenic 35.0%
TGCCAAAATGAAGAGTCTTA+AGG - tig0004828:59065-59084 None:intergenic 35.0%
GAGATGTGATCTAGTATGTA+CGG + tig0004828:59484-59503 Msa1341340:intron 35.0%
!! CTCTTGTTTGTTGTTCAAAG+TGG + tig0004828:59544-59563 Msa1341340:intron 35.0%
AACCCTAGGAGTAAGTTAAT+TGG - tig0004828:59700-59719 None:intergenic 35.0%
AATATGGGAAGAAACAACGA+CGG + tig0004828:59948-59967 Msa1341340:CDS 35.0%
! AAGGCAATGGTCTCTATTTT+TGG + tig0004828:60117-60136 Msa1341340:intron 35.0%
AAATGCGATATGGACAGTTA+GGG - tig0004828:60190-60209 None:intergenic 35.0%
TAAATGCGATATGGACAGTT+AGG - tig0004828:60191-60210 None:intergenic 35.0%
!! AAGGAACTAATTTGCTTGAG+TGG + tig0004828:60533-60552 Msa1341340:intron 35.0%
AATAAATGTGTGGGATCCAA+CGG + tig0004828:60626-60645 Msa1341340:CDS 35.0%
! TGGATTCTTTCTGGATCTTT+TGG + tig0004828:60684-60703 Msa1341340:CDS 35.0%
! ATTCTTTCTGGATCTTTTGG+TGG + tig0004828:60687-60706 Msa1341340:CDS 35.0%
! GATCTTAATAGCATTGAAGC+TGG + tig0004828:60714-60733 Msa1341340:CDS 35.0%
! TTAATAGCATTGAAGCTGGT+TGG + tig0004828:60718-60737 Msa1341340:CDS 35.0%
ACAAATAGCAAGATAGCCAT+TGG + tig0004828:61430-61449 Msa1341340:CDS 35.0%
ATAAGAAGAGAGAGGAGAAA+TGG - tig0004828:61461-61480 None:intergenic 35.0%
TTGGCATTATAAGAAGAGAG+AGG - tig0004828:61469-61488 None:intergenic 35.0%
! TATGGTGATGTCAAATTGCT+TGG - tig0004828:61488-61507 None:intergenic 35.0%
ATAAACCTTCCAGATGAGTA+TGG - tig0004828:61506-61525 None:intergenic 35.0%
ATTGATTAGGATCCACAACT+TGG + tig0004828:61631-61650 Msa1341340:intron 35.0%
TTGATTAGGATCCACAACTT+GGG + tig0004828:61632-61651 Msa1341340:intron 35.0%
!! ACAGTTTTTGTTCTGAGCTA+AGG - tig0004828:61914-61933 None:intergenic 35.0%
AACATGAAGCTAAGATGACT+TGG - tig0004828:62105-62124 None:intergenic 35.0%
CAATCAACAAACAAGAAGGA+CGG - tig0004828:62197-62216 None:intergenic 35.0%
TGCACAAACGTTAAGGAGAT+GGG - tig0004828:57497-57516 None:intergenic 40.0%
TTGCACAAACGTTAAGGAGA+TGG - tig0004828:57498-57517 None:intergenic 40.0%
TCAAGGTTGCACAAACGTTA+AGG - tig0004828:57504-57523 None:intergenic 40.0%
AACGCCAAGAGAGAAGAAAT+AGG - tig0004828:57911-57930 None:intergenic 40.0%
GCCTATACTTCGTGTAGTTT+AGG - tig0004828:58056-58075 None:intergenic 40.0%
TGAGACTTGAAAGGATTCAG+AGG + tig0004828:58088-58107 Msa1341340:CDS 40.0%
TACCTCTATAGTTAGGACAG+GGG - tig0004828:58136-58155 None:intergenic 40.0%
CAGGAAACGCTAGTACAAAA+TGG - tig0004828:58475-58494 None:intergenic 40.0%
! CATTTTGTACTAGCGTTTCC+TGG + tig0004828:58473-58492 Msa1341340:intron 40.0%
! TATGAAATATGGTGGCGTCT+AGG + tig0004828:58777-58796 Msa1341340:intron 40.0%
! ATGAAATATGGTGGCGTCTA+GGG + tig0004828:58778-58797 Msa1341340:intron 40.0%
AGGGTGAACCATCAACTAAA+TGG + tig0004828:58797-58816 Msa1341340:intron 40.0%
CCATCAACTAAATGGTTCAC+CGG + tig0004828:58805-58824 Msa1341340:intron 40.0%
GACATCTAAAAGTGGTTCAC+CGG - tig0004828:58827-58846 None:intergenic 40.0%
GTGGATCAATATCTGTCGAA+GGG - tig0004828:58985-59004 None:intergenic 40.0%
TGGGTGTAGATTAGACAATG+GGG - tig0004828:59015-59034 None:intergenic 40.0%
CTGGGTGTAGATTAGACAAT+GGG - tig0004828:59016-59035 None:intergenic 40.0%
TCTGGGTGTAGATTAGACAA+TGG - tig0004828:59017-59036 None:intergenic 40.0%
TGAAGAGTCTTAAGGTTTCC+TGG - tig0004828:59057-59076 None:intergenic 40.0%
TAGGAAGTGAAGGAACAACA+AGG - tig0004828:59239-59258 None:intergenic 40.0%
! TGGTGGTAGTGAAAGTTGAT+TGG + tig0004828:59371-59390 Msa1341340:intron 40.0%
TGATTGGAGATGTTGAGACA+AGG + tig0004828:59387-59406 Msa1341340:intron 40.0%
GAGTTTGGGAGCAAAAAAGT+AGG + tig0004828:59448-59467 Msa1341340:intron 40.0%
TTTGGGAGCAAAAAAGTAGG+AGG + tig0004828:59451-59470 Msa1341340:intron 40.0%
CCGTTATTAACAACTTCAGG+GGG - tig0004828:60001-60020 None:intergenic 40.0%
CCCCCTGAAGTTGTTAATAA+CGG + tig0004828:59998-60017 Msa1341340:CDS 40.0%
GCCGTTATTAACAACTTCAG+GGG - tig0004828:60002-60021 None:intergenic 40.0%
CGCCGTTATTAACAACTTCA+GGG - tig0004828:60003-60022 None:intergenic 40.0%
TCGCCGTTATTAACAACTTC+AGG - tig0004828:60004-60023 None:intergenic 40.0%
GAAGTTGTTAATAACGGCGA+AGG + tig0004828:60004-60023 Msa1341340:CDS 40.0%
GGACATAGGACCAACATAAA+TGG - tig0004828:60169-60188 None:intergenic 40.0%
ATATGGACAGTTAGGGACAT+AGG - tig0004828:60183-60202 None:intergenic 40.0%
!! AGGGGAAATGTTAACTTGTG+CGG + tig0004828:60227-60246 Msa1341340:intron 40.0%
CGATTGCGTTCACAAAATCA+GGG + tig0004828:60577-60596 Msa1341340:CDS 40.0%
GATTGCGTTCACAAAATCAG+GGG + tig0004828:60578-60597 Msa1341340:CDS 40.0%
GTCCAGTACGTGAATAATCT+GGG - tig0004828:61191-61210 None:intergenic 40.0%
CAGATTATTCACGTACTGGA+CGG + tig0004828:61190-61209 Msa1341340:intron 40.0%
AGTGACACATATCAAGCAAC+TGG + tig0004828:61373-61392 Msa1341340:CDS 40.0%
TGTTACAACCTTCTTTGTGC+TGG + tig0004828:61397-61416 Msa1341340:CDS 40.0%
TTGACATCACCATACTCATC+TGG + tig0004828:61494-61513 Msa1341340:CDS 40.0%
AAGTGTGTGAATAACTCCAC+TGG - tig0004828:61703-61722 None:intergenic 40.0%
TTGGAAAAGCAAGCTACTTC+AGG + tig0004828:61833-61852 Msa1341340:CDS 40.0%
CTGAGCTAAGGTTAAGATGT+TGG - tig0004828:61902-61921 None:intergenic 40.0%
AGAGCTCCTACAACAACAAA+TGG + tig0004828:61944-61963 Msa1341340:CDS 40.0%
GAGCTCCTACAACAACAAAT+GGG + tig0004828:61945-61964 Msa1341340:CDS 40.0%
AGCTCCTACAACAACAAATG+GGG + tig0004828:61946-61965 Msa1341340:CDS 40.0%
! TGGGGCACATACTTTTACTA+TGG + tig0004828:61964-61983 Msa1341340:CDS 40.0%
! GGCACATACTTTTACTATGG+TGG + tig0004828:61967-61986 Msa1341340:CDS 40.0%
GGCAGAAACAAGAATGGAAA+TGG - tig0004828:62170-62189 None:intergenic 40.0%
AGAGAAATTTGCGGTTGGCA+TGG - tig0004828:57468-57487 None:intergenic 45.0%
TTAGCTAAGAGAGACCCTCT+TGG - tig0004828:57632-57651 None:intergenic 45.0%
AATGGTGAGGAAAGGATGGT+GGG - tig0004828:57672-57691 None:intergenic 45.0%
TAATGGTGAGGAAAGGATGG+TGG - tig0004828:57673-57692 None:intergenic 45.0%
AGCAAGAAGAAGATGAGGAG+TGG - tig0004828:57983-58002 None:intergenic 45.0%
ACCTCTATAGTTAGGACAGG+GGG - tig0004828:58135-58154 None:intergenic 45.0%
! AAAAAGGGGTGATCTAAGGC+TGG - tig0004828:58366-58385 None:intergenic 45.0%
CCGGTGAACCATTTAGTTGA+TGG - tig0004828:58808-58827 None:intergenic 45.0%
AGATGTAGAGAGATGAGTGG+GGG - tig0004828:58942-58961 None:intergenic 45.0%
GAGATGTAGAGAGATGAGTG+GGG - tig0004828:58943-58962 None:intergenic 45.0%
CGAGATGTAGAGAGATGAGT+GGG - tig0004828:58944-58963 None:intergenic 45.0%
ACGAGATGTAGAGAGATGAG+TGG - tig0004828:58945-58964 None:intergenic 45.0%
GGTGGATCAATATCTGTCGA+AGG - tig0004828:58986-59005 None:intergenic 45.0%
TGTAGATTAGACAATGGGGG+CGG - tig0004828:59011-59030 None:intergenic 45.0%
GGGTGTAGATTAGACAATGG+GGG - tig0004828:59014-59033 None:intergenic 45.0%
GTTAAAGGGATTTGTGACCG+TGG + tig0004828:59420-59439 Msa1341340:intron 45.0%
TGACCGTGGATATGGAGTTT+GGG + tig0004828:59434-59453 Msa1341340:intron 45.0%
TGTTGTTCAAAGTGGCTCAC+CGG + tig0004828:59552-59571 Msa1341340:intron 45.0%
GGTTCAATTAAGTCCCTCAC+CGG - tig0004828:59574-59593 None:intergenic 45.0%
TCTAGAGGAGATGAGAGAAG+TGG + tig0004828:59809-59828 Msa1341340:CDS 45.0%
GATGAGAGAAGTGGTAAGAG+TGG + tig0004828:59818-59837 Msa1341340:CDS 45.0%
TGGCAAATGTGGCACCAAAA+TGG + tig0004828:59848-59867 Msa1341340:CDS 45.0%
GGCAAATGTGGCACCAAAAT+GGG + tig0004828:59849-59868 Msa1341340:CDS 45.0%
! TTGGACAACGTGTCCCATTT+TGG - tig0004828:59865-59884 None:intergenic 45.0%
AAATGGGACACGTTGTCCAA+AGG + tig0004828:59865-59884 Msa1341340:CDS 45.0%
AATGGGACACGTTGTCCAAA+GGG + tig0004828:59866-59885 Msa1341340:CDS 45.0%
! CAAAGGGAACTGTACCGATA+CGG + tig0004828:59882-59901 Msa1341340:CDS 45.0%
TCGTTGCGACGGAATAAAAG+TGG - tig0004828:59977-59996 None:intergenic 45.0%
GCGATTGCGTTCACAAAATC+AGG + tig0004828:60576-60595 Msa1341340:CDS 45.0%
GTTCACAAAATCAGGGGAAG+AGG + tig0004828:60584-60603 Msa1341340:CDS 45.0%
! AAATCAGGGGAAGAGGTGTA+TGG + tig0004828:60591-60610 Msa1341340:CDS 45.0%
! AATCAGGGGAAGAGGTGTAT+GGG + tig0004828:60592-60611 Msa1341340:CDS 45.0%
! TCATTGACTACTTCCACCGT+TGG - tig0004828:60645-60664 None:intergenic 45.0%
TTGCACTAGTTAGGTCAGTC+CGG + tig0004828:61145-61164 Msa1341340:intron 45.0%
GACCCAGATTATTCACGTAC+TGG + tig0004828:61186-61205 Msa1341340:intron 45.0%
CGTCCAGTACGTGAATAATC+TGG - tig0004828:61192-61211 None:intergenic 45.0%
GCACAAAACCAGCACAAAGA+AGG - tig0004828:61408-61427 None:intergenic 45.0%
AGGAGAAATGGAAGCTCCAA+TGG - tig0004828:61449-61468 None:intergenic 45.0%
CATCACCATACTCATCTGGA+AGG + tig0004828:61498-61517 Msa1341340:CDS 45.0%
!! TGGTGGATGAGATTTGGTGA+CGG + tig0004828:61658-61677 Msa1341340:CDS 45.0%
!! TTTGGTGACGGCACATTGAT+AGG + tig0004828:61670-61689 Msa1341340:CDS 45.0%
!! TTGGTGACGGCACATTGATA+GGG + tig0004828:61671-61690 Msa1341340:CDS 45.0%
CAACACACCTCCACTCAAAT+GGG + tig0004828:61784-61803 Msa1341340:CDS 45.0%
CAAAGCCATCTTCAGCAAAG+TGG - tig0004828:61816-61835 None:intergenic 45.0%
CACTTTGCTGAAGATGGCTT+TGG + tig0004828:61814-61833 Msa1341340:CDS 45.0%
! TGTCGGTGTCTACAATCTCA+AGG - tig0004828:61861-61880 None:intergenic 45.0%
!! TGTGCCCCATTTGTTGTTGT+AGG - tig0004828:61953-61972 None:intergenic 45.0%
! TACTTTTACTATGGTGGCCC+TGG + tig0004828:61973-61992 Msa1341340:CDS 45.0%
! AGCATTGTGGATTGTTGCCA+GGG - tig0004828:61993-62012 None:intergenic 45.0%
! AGTGATGATCACGAGCATTG+TGG - tig0004828:62006-62025 None:intergenic 45.0%
GGAAGTGGCAGAAACAAGAA+TGG - tig0004828:62176-62195 None:intergenic 45.0%
ACAAACAAGAAGGACGGAAG+TGG - tig0004828:62191-62210 None:intergenic 45.0%
!!! TAATTTTTATAAGAATTAAT+TGG - tig0004828:58168-58187 None:intergenic 5.0%
!! TATAAATATAAATAAATTAG+GGG + tig0004828:60209-60228 Msa1341340:intron 5.0%
AAATTTGCGGTTGGCATGGC+TGG - tig0004828:57464-57483 None:intergenic 50.0%
GGGATTTGTGACCGTGGATA+TGG + tig0004828:59426-59445 Msa1341340:intron 50.0%
GTGACCGTGGATATGGAGTT+TGG + tig0004828:59433-59452 Msa1341340:intron 50.0%
GCTCCCAAACTCCATATCCA+CGG - tig0004828:59440-59459 None:intergenic 50.0%
!! CATGGTGGATTCTAGGGTGA+GGG - tig0004828:59595-59614 None:intergenic 50.0%
!! TCATGGTGGATTCTAGGGTG+AGG - tig0004828:59596-59615 None:intergenic 50.0%
ATTCCCTTTGGCATCGTCGT+TGG - tig0004828:59767-59786 None:intergenic 50.0%
AACGACGATGCCAAAGGGAA+TGG + tig0004828:59766-59785 Msa1341340:CDS 50.0%
GAGAAGTGGTAAGAGTGGTG+TGG + tig0004828:59823-59842 Msa1341340:CDS 50.0%
! CGTATCGGTACAGTTCCCTT+TGG - tig0004828:59884-59903 None:intergenic 50.0%
TAATAACGGCGAAGGCCATG+AGG + tig0004828:60012-60031 Msa1341340:CDS 50.0%
! ATCAGGGGAAGAGGTGTATG+GGG + tig0004828:60593-60612 Msa1341340:CDS 50.0%
AAATGTGTGGGATCCAACGG+TGG + tig0004828:60629-60648 Msa1341340:CDS 50.0%
! TAGCATTGAAGCTGGTTGGC+AGG + tig0004828:60722-60741 Msa1341340:CDS 50.0%
TAGGTCAGTCCGGAGCTTTA+TGG + tig0004828:61155-61174 Msa1341340:intron 50.0%
CTGCTGTCACCATAAAGCTC+CGG - tig0004828:61167-61186 None:intergenic 50.0%
AGGATCCACAACTTGGGAAC+TGG + tig0004828:61638-61657 Msa1341340:intron 50.0%
ATCCACAACTTGGGAACTGG+TGG + tig0004828:61641-61660 Msa1341340:CDS 50.0%
ATCCACCAGTTCCCAAGTTG+TGG - tig0004828:61646-61665 None:intergenic 50.0%
! GGGAACTGGTGGATGAGATT+TGG + tig0004828:61652-61671 Msa1341340:CDS 50.0%
ACGGCACATTGATAGGGTAC+TGG + tig0004828:61677-61696 Msa1341340:CDS 50.0%
!! ATTGATAGGGTACTGGCCAG+TGG + tig0004828:61684-61703 Msa1341340:CDS 50.0%
! CCATTTGAGTGGAGGTGTGT+TGG - tig0004828:61786-61805 None:intergenic 50.0%
CCAACACACCTCCACTCAAA+TGG + tig0004828:61783-61802 Msa1341340:CDS 50.0%
! ACCTCCACTCAAATGGGTTC+CGG + tig0004828:61790-61809 Msa1341340:CDS 50.0%
! GAGCATTGTGGATTGTTGCC+AGG - tig0004828:61994-62013 None:intergenic 50.0%
!! TGAGGAAAGGATGGTGGGTG+AGG - tig0004828:57667-57686 None:intergenic 55.0%
GCCCCCTGTCCTAACTATAG+AGG + tig0004828:58131-58150 Msa1341340:CDS 55.0%
! GCTGGGGTATGGATTGTGTG+AGG - tig0004828:58911-58930 None:intergenic 55.0%
AGATTAGACAATGGGGGCGG+CGG - tig0004828:59008-59027 None:intergenic 55.0%
TTCAAAGTGGCTCACCGGTG+AGG + tig0004828:59557-59576 Msa1341340:intron 55.0%
TCAAAGTGGCTCACCGGTGA+GGG + tig0004828:59558-59577 Msa1341340:intron 55.0%
AAGGCCAACGACGATGCCAA+AGG + tig0004828:59760-59779 Msa1341340:CDS 55.0%
AGGCCAACGACGATGCCAAA+GGG + tig0004828:59761-59780 Msa1341340:CDS 55.0%
GTGGTAAGAGTGGTGTGGCA+TGG + tig0004828:59828-59847 Msa1341340:CDS 55.0%
GTGGTGTGGCATGGCAAATG+TGG + tig0004828:59837-59856 Msa1341340:CDS 55.0%
! AGGGAACTGTACCGATACGG+CGG + tig0004828:59885-59904 Msa1341340:CDS 55.0%
! AGTGGAGGTGTGTTGGCCAT+TGG - tig0004828:61779-61798 None:intergenic 55.0%
! TCCGGCCACTTTGCTGAAGA+TGG + tig0004828:61808-61827 Msa1341340:CDS 55.0%
GCCATCTTCAGCAAAGTGGC+CGG - tig0004828:61812-61831 None:intergenic 55.0%
CACCGACAACAGTCTCACCT+CGG + tig0004828:61873-61892 Msa1341340:CDS 55.0%
GGTTAAGATGTTGGTCGCCG+AGG - tig0004828:61893-61912 None:intergenic 55.0%
GAGATGAGTGGGGGAGAGAG+AGG - tig0004828:58933-58952 None:intergenic 60.0%
GATTAGACAATGGGGGCGGC+GGG - tig0004828:59007-59026 None:intergenic 60.0%
! TGTACCGATACGGCGGAGCA+CGG + tig0004828:59892-59911 Msa1341340:CDS 60.0%
TTGCACCATGGTGGCACGGT+CGG - tig0004828:61728-61747 None:intergenic 60.0%
ACCGTGCCACCATGGTGCAA+TGG + tig0004828:61728-61747 Msa1341340:CDS 60.0%
CCCATTGCACCATGGTGGCA+CGG - tig0004828:61732-61751 None:intergenic 60.0%
CCGTGCCACCATGGTGCAAT+GGG + tig0004828:61729-61748 Msa1341340:CDS 60.0%
CGTGCCACCATGGTGCAATG+GGG + tig0004828:61730-61749 Msa1341340:CDS 60.0%
GTGGTGAACACTCGCGCCAA+TGG + tig0004828:61760-61779 Msa1341340:CDS 60.0%
GCCGGAACCCATTTGAGTGG+AGG - tig0004828:61794-61813 None:intergenic 60.0%
GTGGCCGGAACCCATTTGAG+TGG - tig0004828:61797-61816 None:intergenic 60.0%
CGCCGAGGTGAGACTGTTGT+CGG - tig0004828:61878-61897 None:intergenic 60.0%
GGGAGAGAGAGGCTGGGGTA+TGG - tig0004828:58922-58941 None:intergenic 65.0%
AGTGGGGGAGAGAGAGGCTG+GGG - tig0004828:58927-58946 None:intergenic 65.0%
GAGTGGGGGAGAGAGAGGCT+GGG - tig0004828:58928-58947 None:intergenic 65.0%
TGAGTGGGGGAGAGAGAGGC+TGG - tig0004828:58929-58948 None:intergenic 65.0%
TGCACCGTGCTCCGCCGTAT+CGG - tig0004828:59899-59918 None:intergenic 65.0%
CTTCAGGGGGCTCGTTGCGA+CGG - tig0004828:59988-60007 None:intergenic 65.0%
CTTAGCCGACCGTGCCACCA+TGG + tig0004828:61720-61739 Msa1341340:CDS 65.0%
GCCACCATGGTGCAATGGGG+TGG + tig0004828:61733-61752 Msa1341340:CDS 65.0%
GCCACCCCATTGCACCATGG+TGG - tig0004828:61737-61756 None:intergenic 65.0%
CTCGCCACCCCATTGCACCA+TGG - tig0004828:61740-61759 None:intergenic 65.0%
CATGGTGCAATGGGGTGGCG+AGG + tig0004828:61738-61757 Msa1341340:CDS 65.0%
TAGACAATGGGGGCGGCGGG+TGG - tig0004828:59004-59023 None:intergenic 70.0%
GGTGCAATGGGGTGGCGAGG+TGG + tig0004828:61741-61760 Msa1341340:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0004828 gene 57443 62289 57443 ID=Msa1341340;Name=Msa1341340
tig0004828 mRNA 57443 62289 57443 ID=Msa1341340-mRNA-1;Parent=Msa1341340;Name=Msa1341340-mRNA-1;_AED=0.11;_eAED=0.11;_QI=500|0.8|1|1|1|1|6|272|422
tig0004828 exon 57443 58152 57443 ID=Msa1341340-mRNA-1:exon:3175;Parent=Msa1341340-mRNA-1
tig0004828 exon 58318 58404 58318 ID=Msa1341340-mRNA-1:exon:3176;Parent=Msa1341340-mRNA-1
tig0004828 exon 59758 60033 59758 ID=Msa1341340-mRNA-1:exon:3177;Parent=Msa1341340-mRNA-1
tig0004828 exon 60573 60743 60573 ID=Msa1341340-mRNA-1:exon:3178;Parent=Msa1341340-mRNA-1
tig0004828 exon 61373 61519 61373 ID=Msa1341340-mRNA-1:exon:3179;Parent=Msa1341340-mRNA-1
tig0004828 exon 61640 62289 61640 ID=Msa1341340-mRNA-1:exon:3180;Parent=Msa1341340-mRNA-1
tig0004828 five_prime_UTR 57443 57942 57443 ID=Msa1341340-mRNA-1:five_prime_utr;Parent=Msa1341340-mRNA-1
tig0004828 CDS 57943 58152 57943 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 CDS 58318 58404 58318 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 CDS 59758 60033 59758 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 CDS 60573 60743 60573 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 CDS 61373 61519 61373 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 CDS 61640 62017 61640 ID=Msa1341340-mRNA-1:cds;Parent=Msa1341340-mRNA-1
tig0004828 three_prime_UTR 62018 62289 62018 ID=Msa1341340-mRNA-1:three_prime_utr;Parent=Msa1341340-mRNA-1
Gene Sequence

>Msa1341340

ATGGACACTATTATTGTTGAGAGGAAGAAACAAATTTCCACTCCTCATCTTCTTCTTGCTTTCTTGTTCACCTTCCTTTTACAAACAATTATTAGAGTTGAATGCATCAACCTAAACTACACGAAGTATAGGCAAGTTAGTAGTTTGAGACTTGAAAGGATTCAGAGGCACTTGAACAAGATTAACAAGCCCCCTGTCCTAACTATAGAGAGTCAAGATGGTGATCTCATAGATTGTGTTCACAAAAGAAAGCAACCAGCCTTAGATCACCCCTTTTTAAAGAATCACAAAATCCAGAAAAGGCCAACGACGATGCCAAAGGGAATGGATATGAATATTAATGAAGAGTCTAGAGGAGATGAGAGAAGTGGTAAGAGTGGTGTGGCATGGCAAATGTGGCACCAAAATGGGACACGTTGTCCAAAGGGAACTGTACCGATACGGCGGAGCACGGTGCATGATGTGTTGAGAGCTAAATCTTTGTATGAATATGGGAAGAAACAACGACGGTCACCACTTTTATTCCGTCGCAACGAGCCCCCTGAAGTTGTTAATAACGGCGAAGGCCATGAGCATGCGATTGCGTTCACAAAATCAGGGGAAGAGGTGTATGGGGCAAAAGCAACAATAAATGTGTGGGATCCAACGGTGGAAGTAGTCAATGAATTTAGTCTTTCTCAAATTTGGATTCTTTCTGGATCTTTTGGTGGCTCTGATCTTAATAGCATTGAAGCTGGTTGGCAGAGTGACACATATCAAGCAACTGGATGTTACAACCTTCTTTGTGCTGGTTTTGTGCAAACAAATAGCAAGATAGCCATTGGAGCTTCCATTTCTCCTCTCTCTTCTTATAATGCCAAGCAATTTGACATCACCATACTCATCTGGAAGGATCCACAACTTGGGAACTGGTGGATGAGATTTGGTGACGGCACATTGATAGGGTACTGGCCAGTGGAGTTATTCACACACTTAGCCGACCGTGCCACCATGGTGCAATGGGGTGGCGAGGTGGTGAACACTCGCGCCAATGGCCAACACACCTCCACTCAAATGGGTTCCGGCCACTTTGCTGAAGATGGCTTTGGAAAAGCAAGCTACTTCAGGAACCTTGAGATTGTAGACACCGACAACAGTCTCACCTCGGCGACCAACATCTTAACCTTAGCTCAGAACAAAAACTGTTACAATATCAAGAGCTCCTACAACAACAAATGGGGCACATACTTTTACTATGGTGGCCCTGGCAACAATCCACAATGCTCGTGA
Protein sequence

>Msa1341340

MDTIIVERKKQISTPHLLLAFLFTFLLQTIIRVECINLNYTKYRQVSSLRLERIQRHLNKINKPPVLTIESQDGDLIDCVHKRKQPALDHPFLKNHKIQKRPTTMPKGMDMNINEESRGDERSGKSGVAWQMWHQNGTRCPKGTVPIRRSTVHDVLRAKSLYEYGKKQRRSPLLFRRNEPPEVVNNGEGHEHAIAFTKSGEEVYGAKATINVWDPTVEVVNEFSLSQIWILSGSFGGSDLNSIEAGWQSDTYQATGCYNLLCAGFVQTNSKIAIGASISPLSSYNAKQFDITILIWKDPQLGNWWMRFGDGTLIGYWPVELFTHLADRATMVQWGGEVVNTRANGQHTSTQMGSGHFAEDGFGKASYFRNLEIVDTDNSLTSATNILTLAQNKNCYNIKSSYNNKWGTYFYYGGPGNNPQCS*