AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450780 MtrunA17_Chr3g0095221 84.592 331 38 4 1 318 117 447 0.0 543
Msa0450780 MtrunA17_Chr5g0442221 72.930 314 73 4 4 305 118 431 5.12e-152 436
Msa0450780 MtrunA17_Chr7g0270821 51.438 313 136 5 4 304 116 424 5.68e-102 309
Msa0450780 MtrunA17_Chr1g0193961 50.799 313 139 4 4 305 116 424 1.78e-100 306
Msa0450780 MtrunA17_Chr3g0130251 45.846 325 156 6 5 317 150 466 7.04e-86 268
Msa0450780 MtrunA17_Chr2g0295241 44.479 317 154 6 4 304 110 420 1.82e-83 261
Msa0450780 MtrunA17_Chr8g0387391 45.833 312 156 5 5 304 118 428 2.03e-83 262
Msa0450780 MtrunA17_Chr4g0067811 44.268 314 161 6 3 304 112 423 1.97e-82 259
Msa0450780 MtrunA17_Chr7g0255311 44.762 315 160 6 4 304 136 450 3.28e-81 256
Msa0450780 MtrunA17_Chr1g0202651 43.770 313 163 5 4 304 128 439 5.02e-81 256
Msa0450780 MtrunA17_Chr7g0248451 43.168 322 164 6 4 313 128 442 1.80e-78 249
Msa0450780 MtrunA17_Chr8g0348491 43.910 312 162 5 5 304 129 439 4.14e-77 246
Msa0450780 MtrunA17_Chr1g0202641 43.269 312 164 5 5 304 129 439 4.42e-75 251
Msa0450780 MtrunA17_Chr1g0202641 41.853 313 169 5 5 305 629 940 1.68e-70 238
Msa0450780 MtrunA17_Chr4g0070281 44.291 289 148 5 5 280 149 437 2.86e-73 236
Msa0450780 MtrunA17_Chr2g0301091 43.945 289 149 5 5 280 130 418 1.11e-72 234
Msa0450780 MtrunA17_Chr1g0202621 38.838 327 180 7 5 318 122 441 1.23e-64 213
Msa0450780 MtrunA17_Chr2g0319871 56.250 64 28 0 69 132 1 64 1.33e-17 76.6
Msa0450780 MtrunA17_Chr3g0121891 30.653 199 119 4 53 249 146 327 2.63e-17 82.8
Msa0450780 MtrunA17_Chr6g0468871 60.317 63 24 1 120 181 22 84 2.73e-16 73.9
Msa0450780 MtrunA17_Chr5g0418411 33.690 187 98 4 62 242 151 317 3.95e-15 76.3
Msa0450780 MtrunA17_Chr4g0020771 28.627 255 142 7 62 297 196 429 1.00e-14 75.5
Msa0450780 MtrunA17_Chr6g0449961 30.460 174 109 3 58 228 158 322 2.07e-14 74.3
Msa0450780 MtrunA17_Chr2g0332801 27.863 262 146 8 43 297 162 387 2.70e-14 73.9
Msa0450780 MtrunA17_Chr3g0121881 29.119 261 148 7 62 305 153 393 1.35e-13 71.6
Msa0450780 MtrunA17_Chr2g0293681 29.762 168 108 3 63 228 197 356 2.26e-13 71.2
Msa0450780 MtrunA17_Chr4g0043661 31.707 164 94 3 62 219 142 293 3.25e-13 70.5
Msa0450780 MtrunA17_Chr5g0413141 24.194 248 172 4 62 302 186 424 3.85e-13 70.5
Msa0450780 MtrunA17_Chr3g0100091 29.375 160 103 2 62 219 105 256 5.94e-13 69.3
Msa0450780 MtrunA17_Chr8g0337571 30.178 169 100 3 59 221 143 299 6.55e-13 69.7
Msa0450780 MtrunA17_Chr7g0270361 31.395 172 100 3 63 228 198 357 1.17e-12 68.9
Msa0450780 MtrunA17_Chr8g0365891 28.492 179 114 4 53 228 249 416 1.40e-12 68.9
Msa0450780 MtrunA17_Chr4g0052621 31.953 169 103 4 63 228 195 354 2.76e-12 67.8
Msa0450780 MtrunA17_Chr5g0413411 26.705 176 117 3 56 228 263 429 3.56e-12 67.8
Msa0450780 MtrunA17_Chr4g0043431 31.034 232 125 9 23 243 114 321 6.67e-12 66.6
Msa0450780 MtrunA17_Chr8g0365901 26.493 268 154 8 44 304 168 399 2.96e-11 64.7
Msa0450780 MtrunA17_Chr1g0194231 30.178 169 106 3 63 228 213 372 4.11e-11 64.3
Msa0450780 MtrunA17_Chr2g0332971 33.077 130 69 3 94 217 186 303 5.12e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450780 AT4G23820.1 69.108 314 84 4 3 305 113 424 5.70e-150 431
Msa0450780 AT5G41870.1 66.026 312 92 4 5 305 120 428 1.26e-138 403
Msa0450780 AT3G62110.1 50.625 320 133 7 4 305 116 428 3.91e-103 313
Msa0450780 AT3G62110.2 50.625 320 133 7 4 305 116 428 3.91e-103 313
Msa0450780 AT4G33440.1 49.359 312 143 5 5 304 146 454 1.27e-88 276
Msa0450780 AT3G16850.1 43.732 343 176 7 4 333 113 451 5.95e-80 253
Msa0450780 AT3G48950.1 41.846 325 168 7 5 316 119 435 3.27e-79 251
Msa0450780 AT3G61490.2 43.082 318 164 6 2 305 116 430 1.78e-77 247
Msa0450780 AT3G61490.3 43.082 318 164 6 2 305 116 430 1.78e-77 247
Msa0450780 AT3G61490.1 43.082 318 164 6 2 305 116 430 1.78e-77 247
Msa0450780 AT3G61490.5 43.082 318 164 6 2 305 131 445 2.21e-77 247
Msa0450780 AT3G61490.4 43.082 318 164 6 2 305 229 543 1.03e-76 248
Msa0450780 AT2G23900.1 42.222 315 164 7 5 304 130 441 6.40e-74 238
Msa0450780 AT1G19170.1 43.945 289 149 5 5 280 162 450 1.17e-72 235
Msa0450780 AT4G23500.1 41.772 316 167 6 4 305 141 453 7.91e-72 233
Msa0450780 AT3G42950.1 43.945 289 149 5 5 280 140 428 5.77e-69 225
Msa0450780 AT5G49215.2 38.344 326 182 5 4 317 114 432 1.24e-65 215
Msa0450780 AT5G49215.1 38.344 326 182 5 4 317 116 434 1.44e-65 215
Msa0450780 AT3G06770.4 38.170 317 174 6 4 304 29 339 1.27e-61 202
Msa0450780 AT3G06770.1 38.170 317 174 6 4 304 47 357 1.91e-61 202
Msa0450780 AT3G06770.3 38.170 317 174 6 4 304 47 357 1.91e-61 202
Msa0450780 AT3G06770.5 38.170 317 174 6 4 304 117 427 6.11e-61 203
Msa0450780 AT3G06770.2 38.170 317 174 6 4 304 116 426 8.64e-61 202
Msa0450780 AT3G15720.4 30.588 255 152 7 61 301 72 315 1.05e-19 90.5
Msa0450780 AT3G15720.1 30.588 255 152 7 61 301 136 379 1.49e-19 90.5
Msa0450780 AT3G15720.3 30.588 255 152 7 61 301 135 378 1.51e-19 90.5
Msa0450780 AT3G15720.2 30.588 255 149 8 61 301 135 375 1.60e-17 84.3
Msa0450780 AT3G26610.1 26.407 231 154 4 62 285 192 413 1.55e-15 78.2
Msa0450780 AT3G07970.1 31.522 184 110 4 63 239 193 367 1.95e-15 77.8
Msa0450780 AT4G32375.1 32.370 173 99 2 62 228 46 206 5.76e-15 76.3
Msa0450780 AT4G32380.1 33.158 190 101 4 61 244 144 313 2.01e-14 75.1
Msa0450780 AT4G35670.1 32.948 173 98 3 62 228 143 303 2.49e-14 74.3
Msa0450780 AT4G35670.2 32.948 173 98 3 62 228 36 196 2.84e-14 73.2
Msa0450780 AT5G44830.1 29.167 288 165 10 35 305 59 324 3.88e-14 73.2
Msa0450780 AT3G57510.1 27.863 262 165 8 44 293 172 421 4.73e-14 73.6
Msa0450780 AT5G44840.1 28.682 258 159 6 62 308 143 386 1.08e-13 72.4
Msa0450780 AT1G56710.1 29.200 250 151 8 29 269 144 376 1.12e-13 72.4
Msa0450780 AT3G57790.2 29.319 191 115 5 34 220 148 322 3.12e-13 71.2
Msa0450780 AT3G57790.1 29.319 191 115 5 34 220 148 322 3.12e-13 71.2
Msa0450780 AT5G27530.1 28.906 256 156 6 66 309 166 407 3.30e-13 71.2
Msa0450780 AT2G41850.1 29.858 211 129 4 44 247 172 370 3.69e-13 70.9
Msa0450780 AT2G43870.1 30.037 273 145 10 7 264 88 329 8.73e-13 69.7
Msa0450780 AT1G10640.1 25.758 198 134 4 62 256 267 454 1.21e-12 69.7
Msa0450780 AT3G59850.1 29.588 267 142 9 7 257 90 326 1.43e-12 68.9
Msa0450780 AT3G59850.2 29.963 267 141 9 7 257 134 370 1.65e-12 68.9
Msa0450780 AT1G70500.1 27.823 248 137 6 63 304 190 401 1.68e-12 68.9
Msa0450780 AT5G17200.1 28.509 228 136 5 7 228 106 312 1.86e-12 68.9
Msa0450780 AT5G39910.1 32.727 165 93 3 60 218 143 295 1.95e-12 68.6
Msa0450780 AT1G60590.1 25.758 198 134 4 62 256 274 461 2.18e-12 68.9
Msa0450780 AT1G02790.1 33.083 133 77 2 44 176 150 270 5.16e-12 67.4
Msa0450780 AT1G48100.1 28.395 162 104 3 63 221 210 362 1.10e-11 66.6
Msa0450780 AT1G02460.1 28.505 214 123 4 29 228 186 383 1.59e-11 66.2
Msa0450780 AT4G32370.1 31.472 197 114 5 62 248 154 339 1.78e-11 65.5
Msa0450780 AT5G14650.1 25.389 193 121 4 32 221 151 323 2.08e-11 65.5
Msa0450780 AT2G43890.1 25.076 327 181 12 7 304 94 385 2.67e-11 65.1
Msa0450780 AT1G80140.1 26.531 196 124 4 65 256 91 270 3.41e-11 64.3
Msa0450780 AT4G32380.2 34.694 147 78 3 61 201 144 278 4.92e-11 64.3
Msa0450780 AT1G80170.1 23.881 268 186 5 43 301 156 414 5.74e-11 64.3
Msa0450780 AT4G01890.1 28.638 213 123 4 29 228 163 359 5.92e-11 64.3

Find 97 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAAATAATAATATTTC+TGG 0.104399 3_3:-36955111 None:intergenic
TGTCCGATATGTCACGATTT+TGG 0.231140 3_3:+36955325 Msa0450780:CDS
TTCTATGATATTAACCTTCA+TGG 0.242349 3_3:+36956200 Msa0450780:CDS
TCTTCATTCTTTAGAGGTTA+TGG 0.263528 3_3:+36954412 None:intergenic
CCTAGTGTGGAAAAGAGTTT+TGG 0.286883 3_3:+36958174 Msa0450780:CDS
TTCACAACTGGTAGAGCATT+TGG 0.288648 3_3:-36956086 None:intergenic
TAGAAACAAATCTCAGTAAA+AGG 0.304924 3_3:-36956182 None:intergenic
TTCTTTAGAGGTTATGGAAT+TGG 0.313836 3_3:+36954418 None:intergenic
GATGGTAAAGGTGCAATTAA+AGG 0.319561 3_3:-36954441 None:intergenic
CCTGAACCTGCTTTGTGCAT+TGG 0.381981 3_3:+36957746 Msa0450780:CDS
ATCACGATCCGACGTATAAC+CGG 0.387708 3_3:+36955828 Msa0450780:CDS
GGTGAGAATGGAACAATTGA+TGG 0.402464 3_3:+36955007 Msa0450780:intron
TCACAACTGGTAGAGCATTT+GGG 0.403035 3_3:-36956085 None:intergenic
GCTAATAGTGGAGTTGCGTT+GGG 0.424626 3_3:+36957775 Msa0450780:CDS
CCAATGCACAAAGCAGGTTC+AGG 0.433286 3_3:-36957746 None:intergenic
ATTGTAATTCCCTTCACAAC+TGG 0.439300 3_3:-36956098 None:intergenic
GGGTCAATTCCATCAGTGTT+AGG 0.443337 3_3:-36955362 None:intergenic
TTGCAAGCTGGTTTGATACA+TGG 0.446222 3_3:+36956146 Msa0450780:CDS
GAACCTGCTTTGTGCATTGG+AGG 0.453576 3_3:+36957749 Msa0450780:CDS
ACCGGATCGTCTCCATTTGC+CGG 0.454556 3_3:+36955846 Msa0450780:CDS
GAGCCAAAATCGTGACATAT+CGG 0.457475 3_3:-36955328 None:intergenic
CCTACAGCAATGCCGGCAAA+TGG 0.457937 3_3:-36955858 None:intergenic
ATTAACCTTCATGGTGAGAC+AGG 0.459008 3_3:+36956209 Msa0450780:CDS
ATTGCACCTTTACCATCCTA+TGG 0.463424 3_3:+36954447 Msa0450780:CDS
GAGGACTCATACATATCAAC+AGG 0.465287 3_3:+36955735 Msa0450780:CDS
GACACATTGTACAGGTAAAC+CGG 0.468300 3_3:+36957705 Msa0450780:intron
GTGGAGTGAATTCATGCAAC+CGG 0.468392 3_3:-36957724 None:intergenic
TGCTAATAGTGGAGTTGCGT+TGG 0.470008 3_3:+36957774 Msa0450780:CDS
TTCCAATGTTTGTCTTAATG+TGG 0.470222 3_3:-36955953 None:intergenic
CTTCATGGTGAGACAGGATC+AGG 0.486921 3_3:+36956215 Msa0450780:CDS
CGCGACTCTCCTAACACTGA+TGG 0.487424 3_3:+36955353 Msa0450780:CDS
AAACATATATACCTTCCTCC+TGG 0.491546 3_3:-36954486 None:intergenic
GATGAATACGGTATTTCATA+TGG 0.495967 3_3:+36955789 Msa0450780:CDS
CGAAGACTCTTCAACTACAT+AGG 0.496183 3_3:+36957809 Msa0450780:CDS
ATGTGTATATAGAAAATTCA+AGG 0.496847 3_3:+36956009 Msa0450780:CDS
TTCACTGCCTACAGCAATGC+CGG 0.505260 3_3:-36955865 None:intergenic
CCATTTGCCGGCATTGCTGT+AGG 0.508279 3_3:+36955858 Msa0450780:CDS
GCCGGCAAATGGAGACGATC+CGG 0.511985 3_3:-36955847 None:intergenic
GAAGACTCTTCAACTACATA+GGG 0.514510 3_3:+36957810 Msa0450780:CDS
CATTGGAGGTGTGCTAATAG+TGG 0.518636 3_3:+36957763 Msa0450780:CDS
GAGCTCCCTTCCTCTTCCAT+AGG 0.520454 3_3:-36954463 None:intergenic
ATCCACATTAAGACAAACAT+TGG 0.527637 3_3:+36955951 Msa0450780:CDS
GCTGTAGGCAGTGAAACATC+TGG 0.527815 3_3:+36955873 Msa0450780:CDS
GCTGAAGAGGTTGATGTGTT+CGG 0.529206 3_3:-36955916 None:intergenic
TTGTGGCTGTGAAGAGTGGA+TGG 0.529310 3_3:+36955766 Msa0450780:CDS
CAAGCTATGAGAGGCAATGA+TGG 0.529479 3_3:+36958144 Msa0450780:CDS
CCTCTTCCATAGGATGGTAA+AGG 0.537136 3_3:-36954453 None:intergenic
CCTTTACCATCCTATGGAAG+AGG 0.542977 3_3:+36954453 Msa0450780:CDS
CATCATTGCCTCTCATAGCT+TGG 0.545962 3_3:-36958143 None:intergenic
TCCCTTCCTCTTCCATAGGA+TGG 0.549187 3_3:-36954459 None:intergenic
ATTAAGACAAACATTGGAAG+AGG 0.549285 3_3:+36955957 Msa0450780:CDS
AAATGCTCTACCAGTTGTGA+AGG 0.555564 3_3:+36956088 Msa0450780:CDS
TCGTGATGCCATTGCTAGGA+CGG 0.556370 3_3:-36955812 None:intergenic
ACACCTCCAATGCACAAAGC+AGG 0.558930 3_3:-36957752 None:intergenic
TATATAGAAAATTCAAGGCA+AGG 0.561312 3_3:+36956014 Msa0450780:CDS
AACTGGATGTATATTCCAGA+AGG 0.565675 3_3:-36955153 None:intergenic
AAGAGTGGATGGGATGAATA+CGG 0.568218 3_3:+36955777 Msa0450780:CDS
CTGATCCTGTCTCACCATGA+AGG 0.570468 3_3:-36956214 None:intergenic
AACATATATACCTTCCTCCT+GGG 0.571037 3_3:-36954485 None:intergenic
CGGATCGTGATGCCATTGCT+AGG 0.571230 3_3:-36955816 None:intergenic
ATATACATCCAGTTTACTGC+AGG 0.571488 3_3:+36955162 Msa0450780:CDS
AACCTCTTCAGCATGGGAGT+TGG 0.571746 3_3:+36955927 Msa0450780:CDS
CACATCAACCTCTTCAGCAT+GGG 0.573111 3_3:+36955921 Msa0450780:CDS
GGAAGAGGAAGGGAGCTCCC+AGG 0.579032 3_3:+36954468 Msa0450780:CDS
TACCAACTCCCATGCTGAAG+AGG 0.580536 3_3:-36955929 None:intergenic
TGATGGTACCCAACCTAGTG+TGG 0.580647 3_3:+36958161 Msa0450780:CDS
TACCATCCTATGGAAGAGGA+AGG 0.581299 3_3:+36954457 Msa0450780:CDS
GAAGGGAGCTCCCAGGAGGA+AGG 0.586526 3_3:+36954475 Msa0450780:CDS
AAGTTCAAATGTCTGCATAG+AGG 0.586689 3_3:+36955716 Msa0450780:CDS
TGGTGATGTAGGTGACCATC+CGG 0.592460 3_3:+36956049 Msa0450780:CDS
AATGGAACAATTGATGGGCA+AGG 0.593507 3_3:+36955013 Msa0450780:CDS
ATGCACAAAGCAGGTTCAGG+TGG 0.595305 3_3:-36957743 None:intergenic
TCATATGGCCGTCCTAGCAA+TGG 0.595764 3_3:+36955804 Msa0450780:CDS
GTGAGAATGGAACAATTGAT+GGG 0.611373 3_3:+36955008 Msa0450780:CDS
AAGACAAACATTGGAAGAGG+AGG 0.612632 3_3:+36955960 Msa0450780:CDS
GATCTTGTGGCTGTGAAGAG+TGG 0.616644 3_3:+36955762 Msa0450780:CDS
GAGATGTATGGTGGAACATG+TGG 0.617873 3_3:+36955035 Msa0450780:CDS
ACACATCAACCTCTTCAGCA+TGG 0.622974 3_3:+36955920 Msa0450780:CDS
AAAACATCAGAACACTTCCA+AGG 0.628023 3_3:-36956248 None:intergenic
AATGCTCTACCAGTTGTGAA+GGG 0.637716 3_3:+36956089 Msa0450780:CDS
ACCATCCTATGGAAGAGGAA+GGG 0.638578 3_3:+36954458 Msa0450780:CDS
ATCAACAGGAGATGATCTTG+TGG 0.639297 3_3:+36955749 Msa0450780:CDS
GATCAGGTAGATCTCCACCT+TGG 0.642012 3_3:+36956231 Msa0450780:CDS
TTGATGGGCAAGGAGATGTA+TGG 0.649620 3_3:+36955023 Msa0450780:CDS
AACACTGATGGAATTGACCC+AGG 0.651883 3_3:+36955365 Msa0450780:CDS
ATGTATGGTGGAACATGTGG+AGG 0.662758 3_3:+36955038 Msa0450780:CDS
GTGATGTACCAAGCTATGAG+AGG 0.663033 3_3:+36958135 Msa0450780:CDS
ACTGGATGTATATTCCAGAA+GGG 0.663404 3_3:-36955152 None:intergenic
CTAATAGTGGAGTTGCGTTG+GGG 0.669456 3_3:+36957776 Msa0450780:CDS
ACATCAGAACACTTCCAAGG+TGG 0.689498 3_3:-36956245 None:intergenic
ATGGGCAAGGAGATGTATGG+TGG 0.690153 3_3:+36955026 Msa0450780:CDS
CATCGCGAACTCCATCGCCG+TGG 0.694091 3_3:-36954512 None:intergenic
TGTGGCTGTGAAGAGTGGAT+GGG 0.695217 3_3:+36955767 Msa0450780:CDS
AGAGGAAGGGAGCTCCCAGG+AGG 0.696203 3_3:+36954471 Msa0450780:CDS
GAGACGATCCGGTTATACGT+CGG 0.721010 3_3:-36955836 None:intergenic
GTAGGCAGTGAAACATCTGG+CGG 0.736383 3_3:+36955876 Msa0450780:CDS
TCAGTGTTAGGAGAGTCGCG+AGG 0.797208 3_3:-36955350 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCTTTAAATAATTTGTTT+AGG + chr3_3:36954916-36954935 Msa0450780:intron 10.0%
!!! ATTTGAAATAATAATATTTC+TGG - chr3_3:36955114-36955133 None:intergenic 10.0%
!!! AAAGTTTTGAATTACATTTT+AGG - chr3_3:36955281-36955300 None:intergenic 15.0%
!! TAGATAAATGATCTTTATAT+TGG + chr3_3:36955453-36955472 Msa0450780:intron 15.0%
!! AATAATTGAAAATATAGAAG+AGG - chr3_3:36956450-36956469 None:intergenic 15.0%
!! ATCAAGATATTATACAAATT+GGG + chr3_3:36957353-36957372 Msa0450780:intron 15.0%
!!! TTCATTTTAATTGACAATAA+CGG - chr3_3:36957896-36957915 None:intergenic 15.0%
!!! TCATTTTTTTAGATGCTATT+TGG - chr3_3:36954789-36954808 None:intergenic 20.0%
!! AAAAAATGAATACAGAACAT+TGG - chr3_3:36954849-36954868 None:intergenic 20.0%
!! AAAAAACAAAAATGCATCAT+AGG + chr3_3:36955241-36955260 Msa0450780:intron 20.0%
!! AAAAACAAAAATGCATCATA+GGG + chr3_3:36955242-36955261 Msa0450780:intron 20.0%
!!! AAGATCATTTATCTAAGTTT+TGG - chr3_3:36955448-36955467 None:intergenic 20.0%
!!! TTACAAATGTTGACTTTATT+TGG - chr3_3:36955654-36955673 None:intergenic 20.0%
!! ATGTGTATATAGAAAATTCA+AGG + chr3_3:36956009-36956028 Msa0450780:CDS 20.0%
!!! AATTACAATTAAGAGTGTTT+GGG + chr3_3:36956112-36956131 Msa0450780:intron 20.0%
!! TCTATCTTAAACTACTAAAT+TGG + chr3_3:36957063-36957082 Msa0450780:intron 20.0%
!!! GTTTAGTTTGTTTTTTCAAA+TGG + chr3_3:36957218-36957237 Msa0450780:intron 20.0%
!! CATCAAGATATTATACAAAT+TGG + chr3_3:36957352-36957371 Msa0450780:intron 20.0%
!! AGGTATATATGTTTTATCCA+CGG + chr3_3:36954495-36954514 Msa0450780:CDS 25.0%
!!! CCATAATATTAAGGTTTTAG+AGG - chr3_3:36954748-36954767 None:intergenic 25.0%
!!! CCTCTAAAACCTTAATATTA+TGG + chr3_3:36954745-36954764 Msa0450780:intron 25.0%
! CTAAAACCTTAATATTATGG+CGG + chr3_3:36954748-36954767 Msa0450780:intron 25.0%
! TAAAACCTTAATATTATGGC+GGG + chr3_3:36954749-36954768 Msa0450780:intron 25.0%
! TCAATTATGGCTATATAGTT+GGG - chr3_3:36954825-36954844 None:intergenic 25.0%
! ATCAATTATGGCTATATAGT+TGG - chr3_3:36954826-36954845 None:intergenic 25.0%
! AAAGATTAGGTTTCATAGAT+TGG - chr3_3:36954962-36954981 None:intergenic 25.0%
! TATAAAAATAAGAGTGAAGG+AGG - chr3_3:36954987-36955006 None:intergenic 25.0%
!!! TCCTTCACTCTTATTTTTAT+AGG + chr3_3:36954986-36955005 Msa0450780:intron 25.0%
! ACCTATAAAAATAAGAGTGA+AGG - chr3_3:36954990-36955009 None:intergenic 25.0%
!!! CTTATTTTTATAGGTGAGAA+TGG + chr3_3:36954995-36955014 Msa0450780:intron 25.0%
! TTCAAAAATTCAACAAGGTT+TGG - chr3_3:36955089-36955108 None:intergenic 25.0%
! TGGAATTCAAAAATTCAACA+AGG - chr3_3:36955094-36955113 None:intergenic 25.0%
!! GCAGGTAAAAATTTGATTTA+TGG + chr3_3:36955180-36955199 Msa0450780:intron 25.0%
! TATATAGAAAATTCAAGGCA+AGG + chr3_3:36956014-36956033 Msa0450780:CDS 25.0%
!!! TTTGGGTTAAATTTTTGATC+CGG - chr3_3:36956071-36956090 None:intergenic 25.0%
!!! GAATTACAATTAAGAGTGTT+TGG + chr3_3:36956111-36956130 Msa0450780:intron 25.0%
!!! ATTACAATTAAGAGTGTTTG+GGG + chr3_3:36956113-36956132 Msa0450780:intron 25.0%
! TAGAAACAAATCTCAGTAAA+AGG - chr3_3:36956185-36956204 None:intergenic 25.0%
! TTCTATGATATTAACCTTCA+TGG + chr3_3:36956200-36956219 Msa0450780:CDS 25.0%
!!! TGTTTTTGGATTTTCACAAA+AGG + chr3_3:36956265-36956284 Msa0450780:CDS 25.0%
! ACATATAGCTCATGAATAAT+TGG - chr3_3:36956342-36956361 None:intergenic 25.0%
!! TTGAAGTGTCAGTATTATAT+TGG - chr3_3:36956408-36956427 None:intergenic 25.0%
!! TTAGTAGTTTAAGATAGAGA+AGG - chr3_3:36957061-36957080 None:intergenic 25.0%
! AGTATATTGTCCTGTAAATT+TGG + chr3_3:36957131-36957150 Msa0450780:intron 25.0%
!!! ACTTCAAGGTTGATATAAAT+CGG + chr3_3:36957176-36957195 Msa0450780:intron 25.0%
!!! TTTTTTGCAGGTATTGAAAA+TGG + chr3_3:36957260-36957279 Msa0450780:intron 25.0%
! TGAACAACATAAGATATTTC+AGG - chr3_3:36957317-36957336 None:intergenic 25.0%
! TTCTGAGTAATTATTAGTGT+CGG - chr3_3:36957470-36957489 None:intergenic 25.0%
! ATAGAATAGAACTGCAAATA+GGG + chr3_3:36957521-36957540 Msa0450780:intron 25.0%
! CATAACTTATAAATAGACTC+AGG - chr3_3:36957588-36957607 None:intergenic 25.0%
TTTGCATTATACTACACATG+TGG - chr3_3:36954635-36954654 None:intergenic 30.0%
AAATTCCCGCCATAATATTA+AGG - chr3_3:36954757-36954776 None:intergenic 30.0%
ACAGAACATTGGATCAATTA+TGG - chr3_3:36954838-36954857 None:intergenic 30.0%
! AATTTTTACCTGCAGTAAAC+TGG - chr3_3:36955173-36955192 None:intergenic 30.0%
AGTTCTATCAGTATTTACCT+GGG - chr3_3:36955385-36955404 None:intergenic 30.0%
AAGTTCTATCAGTATTTACC+TGG - chr3_3:36955386-36955405 None:intergenic 30.0%
!!! TAAGTTTTGAGCTAGATTTC+AGG - chr3_3:36955413-36955432 None:intergenic 30.0%
!! TGATCTTTATATTGGCTCAT+TGG + chr3_3:36955461-36955480 Msa0450780:intron 30.0%
AAGTTATTGTCTCAGAAGTT+AGG + chr3_3:36955540-36955559 Msa0450780:intron 30.0%
GATGAATACGGTATTTCATA+TGG + chr3_3:36955789-36955808 Msa0450780:CDS 30.0%
ATCCACATTAAGACAAACAT+TGG + chr3_3:36955951-36955970 Msa0450780:CDS 30.0%
TTCCAATGTTTGTCTTAATG+TGG - chr3_3:36955956-36955975 None:intergenic 30.0%
ATTAAGACAAACATTGGAAG+AGG + chr3_3:36955957-36955976 Msa0450780:CDS 30.0%
! ATAAAAATTGCTGGTGATGT+AGG + chr3_3:36956038-36956057 Msa0450780:CDS 30.0%
TATTAACGATTTCTTCATGC+CGG + chr3_3:36956466-36956485 Msa0450780:intron 30.0%
TTTACAAAGCTGATGATTGA+TGG + chr3_3:36956826-36956845 Msa0450780:intron 30.0%
CTACTGTGATTAAGAAACTA+TGG - chr3_3:36956895-36956914 None:intergenic 30.0%
GTTGATTAAAGATTCAAGCT+TGG - chr3_3:36956919-36956938 None:intergenic 30.0%
GTTGAACTATGACTTTCTTA+TGG - chr3_3:36956948-36956967 None:intergenic 30.0%
! TCCTGTAAATTTGGTTTCAT+TGG + chr3_3:36957140-36957159 Msa0450780:intron 30.0%
! CCTGTAAATTTGGTTTCATT+GGG + chr3_3:36957141-36957160 Msa0450780:intron 30.0%
GATTTATATCAACCTTGAAG+TGG - chr3_3:36957177-36957196 None:intergenic 30.0%
!! AAGGTTGATATAAATCGGAT+TGG + chr3_3:36957181-36957200 Msa0450780:intron 30.0%
!! TTGATATAAATCGGATTGGT+CGG + chr3_3:36957185-36957204 Msa0450780:intron 30.0%
!!! ATGCACTCTAAATTTTTTGC+AGG + chr3_3:36957248-36957267 Msa0450780:intron 30.0%
TTATGTTGTTCATAGCATTG+CGG + chr3_3:36957325-36957344 Msa0450780:intron 30.0%
GATAGAATAGAACTGCAAAT+AGG + chr3_3:36957520-36957539 Msa0450780:intron 30.0%
!!! CTCTGAGATAAGACATATTT+TGG - chr3_3:36957613-36957632 None:intergenic 30.0%
CAAAATATGTCTTATCTCAG+AGG + chr3_3:36957611-36957630 Msa0450780:intron 30.0%
AATAGCAAAATAATAGAGCC+AGG - chr3_3:36958010-36958029 None:intergenic 30.0%
!!! TTATTTTGCTATTAGATGCG+TGG + chr3_3:36958017-36958036 Msa0450780:intron 30.0%
! GATGGTAAAGGTGCAATTAA+AGG - chr3_3:36954444-36954463 None:intergenic 35.0%
AACATATATACCTTCCTCCT+GGG - chr3_3:36954488-36954507 None:intergenic 35.0%
AAACATATATACCTTCCTCC+TGG - chr3_3:36954489-36954508 None:intergenic 35.0%
TAATGTTGCAGCAAAATCTG+AGG + chr3_3:36954658-36954677 Msa0450780:intron 35.0%
GTTTCATAGATTGGTACACT+TGG - chr3_3:36954953-36954972 None:intergenic 35.0%
GTGAGAATGGAACAATTGAT+GGG + chr3_3:36955008-36955027 Msa0450780:CDS 35.0%
!! TTTTCAAGAATTCTCCCTTC+TGG + chr3_3:36955138-36955157 Msa0450780:CDS 35.0%
ACTGGATGTATATTCCAGAA+GGG - chr3_3:36955155-36955174 None:intergenic 35.0%
AACTGGATGTATATTCCAGA+AGG - chr3_3:36955156-36955175 None:intergenic 35.0%
ATATACATCCAGTTTACTGC+AGG + chr3_3:36955162-36955181 Msa0450780:CDS 35.0%
AAAATGCATCATAGGGATAG+AGG + chr3_3:36955249-36955268 Msa0450780:intron 35.0%
CTCTTCAGAAAGTAGTTTAG+AGG + chr3_3:36955622-36955641 Msa0450780:intron 35.0%
AAGTTCAAATGTCTGCATAG+AGG + chr3_3:36955716-36955735 Msa0450780:CDS 35.0%
AGGCAAGGAATAAAAATTGC+TGG + chr3_3:36956029-36956048 Msa0450780:CDS 35.0%
! GGTTAAATTTTTGATCCGGA+TGG - chr3_3:36956067-36956086 None:intergenic 35.0%
ATTGTAATTCCCTTCACAAC+TGG - chr3_3:36956101-36956120 None:intergenic 35.0%
AAAACATCAGAACACTTCCA+AGG - chr3_3:36956251-36956270 None:intergenic 35.0%
!!! TGGAAGTGTTCTGATGTTTT+TGG + chr3_3:36956251-36956270 Msa0450780:CDS 35.0%
! TTTCACAAAAGGTTAGTCCT+TGG + chr3_3:36956276-36956295 Msa0450780:intron 35.0%
! AATCCGTAATTTCAAGTCTC+AGG - chr3_3:36956532-36956551 None:intergenic 35.0%
CATCAATTGTGAGAGTCAAA+TGG + chr3_3:36956725-36956744 Msa0450780:intron 35.0%
ATAGTTCAACTAGTGACCTA+GGG + chr3_3:36956958-36956977 Msa0450780:intron 35.0%
TAAACCACTTCCATTCATTC+AGG + chr3_3:36957030-36957049 Msa0450780:intron 35.0%
ATTACCTGAATGAATGGAAG+TGG - chr3_3:36957037-36957056 None:intergenic 35.0%
GAAGGAATTACCTGAATGAA+TGG - chr3_3:36957043-36957062 None:intergenic 35.0%
CCCAATGAAACCAAATTTAC+AGG - chr3_3:36957144-36957163 None:intergenic 35.0%
!! TGATATAAATCGGATTGGTC+GGG + chr3_3:36957186-36957205 Msa0450780:intron 35.0%
! TGATACAAAGTTGATTGCAG+AGG - chr3_3:36957286-36957305 None:intergenic 35.0%
CACTGTAATGGTTAAGTGAA+GGG + chr3_3:36957544-36957563 Msa0450780:intron 35.0%
ATAAATAGACTCAGGAACCT+CGG - chr3_3:36957580-36957599 None:intergenic 35.0%
TCCAAAACTGCATGTTATAG+AGG + chr3_3:36957640-36957659 Msa0450780:intron 35.0%
! TCCTCTATAACATGCAGTTT+TGG - chr3_3:36957644-36957663 None:intergenic 35.0%
GAAGACTCTTCAACTACATA+GGG + chr3_3:36957810-36957829 Msa0450780:CDS 35.0%
TCTGTACATGTTAGAGTATG+GGG - chr3_3:36957854-36957873 None:intergenic 35.0%
GTCTGTACATGTTAGAGTAT+GGG - chr3_3:36957855-36957874 None:intergenic 35.0%
AGTCTGTACATGTTAGAGTA+TGG - chr3_3:36957856-36957875 None:intergenic 35.0%
TCAGGCATTAACACATTACT+AGG - chr3_3:36957938-36957957 None:intergenic 35.0%
ATTGTCTAATTGCCTGAATG+CGG + chr3_3:36957959-36957978 Msa0450780:intron 35.0%
!! CTCGATTGACTTTTTGTAAG+AGG + chr3_3:36958084-36958103 Msa0450780:intron 35.0%
! CTAGTGTGGAAAAGAGTTTT+GGG + chr3_3:36958175-36958194 Msa0450780:CDS 35.0%
ATTGCACCTTTACCATCCTA+TGG + chr3_3:36954447-36954466 Msa0450780:CDS 40.0%
! ATATGTTTTATCCACGGCGA+TGG + chr3_3:36954501-36954520 Msa0450780:CDS 40.0%
TCATATCTCACCAGTGAGTA+TGG + chr3_3:36954590-36954609 Msa0450780:intron 40.0%
CAACTTAGAACCATACTCAC+TGG - chr3_3:36954603-36954622 None:intergenic 40.0%
!! GTGAGTATGGTTCTAAGTTG+TGG + chr3_3:36954603-36954622 Msa0450780:intron 40.0%
!! ATGGTTCTAAGTTGTGGATC+TGG + chr3_3:36954609-36954628 Msa0450780:intron 40.0%
CAGCAAAATCTGAGGAAATG+TGG + chr3_3:36954666-36954685 Msa0450780:intron 40.0%
!! AATAGTATCGGCCACAATAG+TGG + chr3_3:36954702-36954721 Msa0450780:intron 40.0%
CAGTTTCACAACCACTATTG+TGG - chr3_3:36954716-36954735 None:intergenic 40.0%
AGTGAAGGAGGAGAAAGATT+AGG - chr3_3:36954975-36954994 None:intergenic 40.0%
GGTGAGAATGGAACAATTGA+TGG + chr3_3:36955007-36955026 Msa0450780:intron 40.0%
! AATGGAACAATTGATGGGCA+AGG + chr3_3:36955013-36955032 Msa0450780:CDS 40.0%
CAACAACATTGCTGCAATGA+AGG - chr3_3:36955307-36955326 None:intergenic 40.0%
! TGTCCGATATGTCACGATTT+TGG + chr3_3:36955325-36955344 Msa0450780:CDS 40.0%
GAGCCAAAATCGTGACATAT+CGG - chr3_3:36955331-36955350 None:intergenic 40.0%
GAGGACTCATACATATCAAC+AGG + chr3_3:36955735-36955754 Msa0450780:CDS 40.0%
ATCAACAGGAGATGATCTTG+TGG + chr3_3:36955749-36955768 Msa0450780:CDS 40.0%
AAGAGTGGATGGGATGAATA+CGG + chr3_3:36955777-36955796 Msa0450780:CDS 40.0%
AAGACAAACATTGGAAGAGG+AGG + chr3_3:36955960-36955979 Msa0450780:CDS 40.0%
! TCACAACTGGTAGAGCATTT+GGG - chr3_3:36956088-36956107 None:intergenic 40.0%
! TTCACAACTGGTAGAGCATT+TGG - chr3_3:36956089-36956108 None:intergenic 40.0%
AAATGCTCTACCAGTTGTGA+AGG + chr3_3:36956088-36956107 Msa0450780:CDS 40.0%
AATGCTCTACCAGTTGTGAA+GGG + chr3_3:36956089-36956108 Msa0450780:CDS 40.0%
!! TTGCAAGCTGGTTTGATACA+TGG + chr3_3:36956146-36956165 Msa0450780:CDS 40.0%
ATTAACCTTCATGGTGAGAC+AGG + chr3_3:36956209-36956228 Msa0450780:CDS 40.0%
GAATAATTGGTACAAGACCC+AGG - chr3_3:36956329-36956348 None:intergenic 40.0%
GCTCCTGAGACTTGAAATTA+CGG + chr3_3:36956526-36956545 Msa0450780:intron 40.0%
! AAAGCTGATGATTGATGGTC+AGG + chr3_3:36956831-36956850 Msa0450780:intron 40.0%
CATAGTTCAACTAGTGACCT+AGG + chr3_3:36956957-36956976 Msa0450780:intron 40.0%
GGTTCTTTCTTTCCACTTCA+AGG + chr3_3:36957162-36957181 Msa0450780:intron 40.0%
!! GATATAAATCGGATTGGTCG+GGG + chr3_3:36957187-36957206 Msa0450780:intron 40.0%
! GTTCTGAATACAATTGAGCC+CGG + chr3_3:36957496-36957515 Msa0450780:intron 40.0%
TTCTGAATACAATTGAGCCC+GGG + chr3_3:36957497-36957516 Msa0450780:intron 40.0%
TTGCAGTTCTATTCTATCCC+CGG - chr3_3:36957518-36957537 None:intergenic 40.0%
GCACTGTAATGGTTAAGTGA+AGG + chr3_3:36957543-36957562 Msa0450780:intron 40.0%
GCATGAAACCTGAAATGTGT+TGG + chr3_3:36957681-36957700 Msa0450780:intron 40.0%
ATGTGTCACCAACACATTTC+AGG - chr3_3:36957692-36957711 None:intergenic 40.0%
GACACATTGTACAGGTAAAC+CGG + chr3_3:36957705-36957724 Msa0450780:intron 40.0%
CGAAGACTCTTCAACTACAT+AGG + chr3_3:36957809-36957828 Msa0450780:CDS 40.0%
TCAGGCAATTAGACAATGTC+AGG - chr3_3:36957956-36957975 None:intergenic 40.0%
TTGTCTAATTGCCTGAATGC+GGG + chr3_3:36957960-36957979 Msa0450780:intron 40.0%
! CTTTTTGTAAGAGGCGAAGA+TGG + chr3_3:36958093-36958112 Msa0450780:intron 40.0%
! ACTCTTTTCCACACTAGGTT+GGG - chr3_3:36958172-36958191 None:intergenic 40.0%
! AACTCTTTTCCACACTAGGT+TGG - chr3_3:36958173-36958192 None:intergenic 40.0%
! CCAAAACTCTTTTCCACACT+AGG - chr3_3:36958177-36958196 None:intergenic 40.0%
! CCTAGTGTGGAAAAGAGTTT+TGG + chr3_3:36958174-36958193 Msa0450780:CDS 40.0%
CCTCTTCCATAGGATGGTAA+AGG - chr3_3:36954456-36954475 None:intergenic 45.0%
CCTTTACCATCCTATGGAAG+AGG + chr3_3:36954453-36954472 Msa0450780:CDS 45.0%
TACCATCCTATGGAAGAGGA+AGG + chr3_3:36954457-36954476 Msa0450780:CDS 45.0%
ACCATCCTATGGAAGAGGAA+GGG + chr3_3:36954458-36954477 Msa0450780:CDS 45.0%
GTTCGCGATGTAATCATCAC+AGG + chr3_3:36954525-36954544 Msa0450780:intron 45.0%
GCGATGTAATCATCACAGGT+AGG + chr3_3:36954529-36954548 Msa0450780:intron 45.0%
CGATACTATTGTGACCGCAT+CGG - chr3_3:36954692-36954711 None:intergenic 45.0%
CGATGCGGTCACAATAGTAT+CGG + chr3_3:36954690-36954709 Msa0450780:intron 45.0%
GTGGTTGTGAAACTGTTGTG+CGG + chr3_3:36954721-36954740 Msa0450780:intron 45.0%
! TTGATGGGCAAGGAGATGTA+TGG + chr3_3:36955023-36955042 Msa0450780:CDS 45.0%
! GAGATGTATGGTGGAACATG+TGG + chr3_3:36955035-36955054 Msa0450780:CDS 45.0%
! ATGTATGGTGGAACATGTGG+AGG + chr3_3:36955038-36955057 Msa0450780:CDS 45.0%
GGGTCAATTCCATCAGTGTT+AGG - chr3_3:36955365-36955384 None:intergenic 45.0%
AACACTGATGGAATTGACCC+AGG + chr3_3:36955365-36955384 Msa0450780:CDS 45.0%
ATCACGATCCGACGTATAAC+CGG + chr3_3:36955828-36955847 Msa0450780:CDS 45.0%
!! GCTGAAGAGGTTGATGTGTT+CGG - chr3_3:36955919-36955938 None:intergenic 45.0%
ACACATCAACCTCTTCAGCA+TGG + chr3_3:36955920-36955939 Msa0450780:CDS 45.0%
CACATCAACCTCTTCAGCAT+GGG + chr3_3:36955921-36955940 Msa0450780:CDS 45.0%
!! TAAGAGTGTTTGGGGTGTGA+AGG + chr3_3:36956121-36956140 Msa0450780:intron 45.0%
ACATCAGAACACTTCCAAGG+TGG - chr3_3:36956248-36956267 None:intergenic 45.0%
! GCACTGACACTTCAGATTGA+AGG + chr3_3:36956363-36956382 Msa0450780:intron 45.0%
AGGCTAAGGAGGTGATTCAT+TGG - chr3_3:36956672-36956691 None:intergenic 45.0%
!! CTTAGCCTTGCACATGTTGA+GGG + chr3_3:36956684-36956703 Msa0450780:intron 45.0%
! CTGATGATTGATGGTCAGGT+GGG + chr3_3:36956835-36956854 Msa0450780:intron 45.0%
CTAGGGTCTCTATGGTTCAA+CGG + chr3_3:36956975-36956994 Msa0450780:intron 45.0%
TGTTGTTCATAGCATTGCGG+TGG + chr3_3:36957328-36957347 Msa0450780:intron 45.0%
TCTGAATACAATTGAGCCCG+GGG + chr3_3:36957498-36957517 Msa0450780:intron 45.0%
TGCAGTTCTATTCTATCCCC+GGG - chr3_3:36957517-36957536 None:intergenic 45.0%
!! CTGCAAATAGGGCACTGTAA+TGG + chr3_3:36957532-36957551 Msa0450780:intron 45.0%
GTTAAGTGAAGGGAATAGCG+TGG + chr3_3:36957554-36957573 Msa0450780:intron 45.0%
!! GTGTTGGTGACACATTGTAC+AGG + chr3_3:36957697-36957716 Msa0450780:intron 45.0%
GTGGAGTGAATTCATGCAAC+CGG - chr3_3:36957727-36957746 None:intergenic 45.0%
! CATTGGAGGTGTGCTAATAG+TGG + chr3_3:36957763-36957782 Msa0450780:CDS 45.0%
! TGCTAATAGTGGAGTTGCGT+TGG + chr3_3:36957774-36957793 Msa0450780:CDS 45.0%
! GCTAATAGTGGAGTTGCGTT+GGG + chr3_3:36957775-36957794 Msa0450780:CDS 45.0%
! CTAATAGTGGAGTTGCGTTG+GGG + chr3_3:36957776-36957795 Msa0450780:CDS 45.0%
GGATTCTGCTGCTGAAAGTT+GGG + chr3_3:36957981-36958000 Msa0450780:intron 45.0%
GTGATGTACCAAGCTATGAG+AGG + chr3_3:36958135-36958154 Msa0450780:CDS 45.0%
CATCATTGCCTCTCATAGCT+TGG - chr3_3:36958146-36958165 None:intergenic 45.0%
CAAGCTATGAGAGGCAATGA+TGG + chr3_3:36958144-36958163 Msa0450780:CDS 45.0%
TCCCTTCCTCTTCCATAGGA+TGG - chr3_3:36954462-36954481 None:intergenic 50.0%
ATGGGCAAGGAGATGTATGG+TGG + chr3_3:36955026-36955045 Msa0450780:CDS 50.0%
GATCTTGTGGCTGTGAAGAG+TGG + chr3_3:36955762-36955781 Msa0450780:CDS 50.0%
TTGTGGCTGTGAAGAGTGGA+TGG + chr3_3:36955766-36955785 Msa0450780:CDS 50.0%
TGTGGCTGTGAAGAGTGGAT+GGG + chr3_3:36955767-36955786 Msa0450780:CDS 50.0%
TCATATGGCCGTCCTAGCAA+TGG + chr3_3:36955804-36955823 Msa0450780:CDS 50.0%
TCGTGATGCCATTGCTAGGA+CGG - chr3_3:36955815-36955834 None:intergenic 50.0%
GAGACGATCCGGTTATACGT+CGG - chr3_3:36955839-36955858 None:intergenic 50.0%
TTCACTGCCTACAGCAATGC+CGG - chr3_3:36955868-36955887 None:intergenic 50.0%
GCTGTAGGCAGTGAAACATC+TGG + chr3_3:36955873-36955892 Msa0450780:CDS 50.0%
GTAGGCAGTGAAACATCTGG+CGG + chr3_3:36955876-36955895 Msa0450780:CDS 50.0%
AACCTCTTCAGCATGGGAGT+TGG + chr3_3:36955927-36955946 Msa0450780:CDS 50.0%
TACCAACTCCCATGCTGAAG+AGG - chr3_3:36955932-36955951 None:intergenic 50.0%
! TGGTGATGTAGGTGACCATC+CGG + chr3_3:36956049-36956068 Msa0450780:CDS 50.0%
! GGTGTGAAGGTTTTGCAAGC+TGG + chr3_3:36956134-36956153 Msa0450780:intron 50.0%
CTGATCCTGTCTCACCATGA+AGG - chr3_3:36956217-36956236 None:intergenic 50.0%
CTTCATGGTGAGACAGGATC+AGG + chr3_3:36956215-36956234 Msa0450780:CDS 50.0%
GATCAGGTAGATCTCCACCT+TGG + chr3_3:36956231-36956250 Msa0450780:CDS 50.0%
ATACAGACACCGAACACGAC+AGG - chr3_3:36956495-36956514 None:intergenic 50.0%
CAACATGTGCAAGGCTAAGG+AGG - chr3_3:36956683-36956702 None:intergenic 50.0%
CCTCAACATGTGCAAGGCTA+AGG - chr3_3:36956686-36956705 None:intergenic 50.0%
!! CCTTAGCCTTGCACATGTTG+AGG + chr3_3:36956683-36956702 Msa0450780:intron 50.0%
CATGACCCTCAACATGTGCA+AGG - chr3_3:36956692-36956711 None:intergenic 50.0%
! GCTGATGATTGATGGTCAGG+TGG + chr3_3:36956834-36956853 Msa0450780:intron 50.0%
GGTCAGGTGGGTCAAGAATT+TGG + chr3_3:36956847-36956866 Msa0450780:intron 50.0%
CTAGTGACCTAGGGTCTCTA+TGG + chr3_3:36956967-36956986 Msa0450780:intron 50.0%
CGTTGAACCATAGAGACCCT+AGG - chr3_3:36956977-36956996 None:intergenic 50.0%
GGTCTCTATGGTTCAACGGA+GGG + chr3_3:36956979-36956998 Msa0450780:intron 50.0%
GTCTCTATGGTTCAACGGAG+GGG + chr3_3:36956980-36956999 Msa0450780:intron 50.0%
ATGCACAAAGCAGGTTCAGG+TGG - chr3_3:36957746-36957765 None:intergenic 50.0%
CCAATGCACAAAGCAGGTTC+AGG - chr3_3:36957749-36957768 None:intergenic 50.0%
CCTGAACCTGCTTTGTGCAT+TGG + chr3_3:36957746-36957765 Msa0450780:CDS 50.0%
GAACCTGCTTTGTGCATTGG+AGG + chr3_3:36957749-36957768 Msa0450780:CDS 50.0%
ACACCTCCAATGCACAAAGC+AGG - chr3_3:36957755-36957774 None:intergenic 50.0%
GGGATTCTGCTGCTGAAAGT+TGG + chr3_3:36957980-36957999 Msa0450780:intron 50.0%
CTGCTGAAAGTTGGGAATCC+TGG + chr3_3:36957989-36958008 Msa0450780:intron 50.0%
TGATGGTACCCAACCTAGTG+TGG + chr3_3:36958161-36958180 Msa0450780:CDS 50.0%
GAGCTCCCTTCCTCTTCCAT+AGG - chr3_3:36954466-36954485 None:intergenic 55.0%
CTGAGGAAATGTGGCCGATG+CGG + chr3_3:36954675-36954694 Msa0450780:intron 55.0%
TCAGTGTTAGGAGAGTCGCG+AGG - chr3_3:36955353-36955372 None:intergenic 55.0%
CGCGACTCTCCTAACACTGA+TGG + chr3_3:36955353-36955372 Msa0450780:CDS 55.0%
CGGATCGTGATGCCATTGCT+AGG - chr3_3:36955819-36955838 None:intergenic 55.0%
ACCGGATCGTCTCCATTTGC+CGG + chr3_3:36955846-36955865 Msa0450780:CDS 55.0%
CCTACAGCAATGCCGGCAAA+TGG - chr3_3:36955861-36955880 None:intergenic 55.0%
CCATTTGCCGGCATTGCTGT+AGG + chr3_3:36955858-36955877 Msa0450780:CDS 55.0%
CTCAGCTGAGAACATGGCCA+AGG - chr3_3:36956296-36956315 None:intergenic 55.0%
TGGCTGCTCAGCTGAGAACA+TGG - chr3_3:36956302-36956321 None:intergenic 55.0%
TGGTACAAGACCCAGGCTCT+TGG - chr3_3:36956322-36956341 None:intergenic 55.0%
GGGTCTCTATGGTTCAACGG+AGG + chr3_3:36956978-36956997 Msa0450780:intron 55.0%
TCTATGGTTCAACGGAGGGG+AGG + chr3_3:36956983-36957002 Msa0450780:intron 55.0%
AGCAGCAGAATCCCGCATTC+AGG - chr3_3:36957974-36957993 None:intergenic 55.0%
GCCGGCAAATGGAGACGATC+CGG - chr3_3:36955850-36955869 None:intergenic 60.0%
AGCTGAGCAGCCAAGAGCCT+GGG + chr3_3:36956309-36956328 Msa0450780:intron 60.0%
TGCCGGTGTCCTGTCGTGTT+CGG + chr3_3:36956483-36956502 Msa0450780:intron 60.0%
CACCGAACACGACAGGACAC+CGG - chr3_3:36956488-36956507 None:intergenic 60.0%
!! TCGGATTGGTCGGGGCTCTT+TGG + chr3_3:36957195-36957214 Msa0450780:intron 60.0%
!! CGGATTGGTCGGGGCTCTTT+GGG + chr3_3:36957196-36957215 Msa0450780:intron 60.0%
TGAAGGGAATAGCGTGGCCG+AGG + chr3_3:36957560-36957579 Msa0450780:intron 60.0%
GGAAGAGGAAGGGAGCTCCC+AGG + chr3_3:36954468-36954487 Msa0450780:CDS 65.0%
AGAGGAAGGGAGCTCCCAGG+AGG + chr3_3:36954471-36954490 Msa0450780:CDS 65.0%
GAAGGGAGCTCCCAGGAGGA+AGG + chr3_3:36954475-36954494 Msa0450780:CDS 65.0%
CATCGCGAACTCCATCGCCG+TGG - chr3_3:36954515-36954534 None:intergenic 65.0%
CAGCTGAGCAGCCAAGAGCC+TGG + chr3_3:36956308-36956327 Msa0450780:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 36954426 36958239 36954426 ID=Msa0450780;Name=Msa0450780
chr3_3 mRNA 36954426 36958239 36954426 ID=Msa0450780-mRNA-1;Parent=Msa0450780;Name=Msa0450780-mRNA-1;_AED=0.24;_eAED=0.28;_QI=0|0|0|0.75|0.71|0.62|8|0|385
chr3_3 exon 36954426 36954533 36954426 ID=Msa0450780-mRNA-1:exon:6704;Parent=Msa0450780-mRNA-1
chr3_3 exon 36955008 36955183 36955008 ID=Msa0450780-mRNA-1:exon:6705;Parent=Msa0450780-mRNA-1
chr3_3 exon 36955316 36955386 36955316 ID=Msa0450780-mRNA-1:exon:6706;Parent=Msa0450780-mRNA-1
chr3_3 exon 36955712 36955899 36955712 ID=Msa0450780-mRNA-1:exon:6707;Parent=Msa0450780-mRNA-1
chr3_3 exon 36955906 36956127 36955906 ID=Msa0450780-mRNA-1:exon:6708;Parent=Msa0450780-mRNA-1
chr3_3 exon 36956143 36956286 36956143 ID=Msa0450780-mRNA-1:exon:6709;Parent=Msa0450780-mRNA-1
chr3_3 exon 36957719 36957831 36957719 ID=Msa0450780-mRNA-1:exon:6710;Parent=Msa0450780-mRNA-1
chr3_3 exon 36958104 36958239 36958104 ID=Msa0450780-mRNA-1:exon:6711;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36954426 36954533 36954426 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36955008 36955183 36955008 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36955316 36955386 36955316 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36955712 36955899 36955712 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36955906 36956127 36955906 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36956143 36956286 36956143 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36957719 36957831 36957719 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
chr3_3 CDS 36958104 36958239 36958104 ID=Msa0450780-mRNA-1:cds;Parent=Msa0450780-mRNA-1
Gene Sequence

>Msa0450780

AGGTTATGGAATTGGCCTTTAATTGCACCTTTACCATCCTATGGAAGAGGAAGGGAGCTCCCAGGAGGAAGGTATATATGTTTTATCCACGGCGATGGAGTTCGCGATGTGAGAATGGAACAATTGATGGGCAAGGAGATGTATGGTGGAACATGTGGAGGCAAGAGAACTCTTCAATTTACAAGACCAAACCTTGTTGAATTTTTGAATTCCAGAAATATTATTATTTCAAATTTTATTTTCAAGAATTCTCCCTTCTGGAATATACATCCAGTTTACTGCAGCAATGTTGTTGTCCGATATGTCACGATTTTGGCTCCTCGCGACTCTCCTAACACTGATGGAATTGACCCAGATTCAAGTTCAAATGTCTGCATAGAGGACTCATACATATCAACAGGAGATGATCTTGTGGCTGTGAAGAGTGGATGGGATGAATACGGTATTTCATATGGCCGTCCTAGCAATGGCATCACGATCCGACGTATAACCGGATCGTCTCCATTTGCCGGCATTGCTGTAGGCAGTGAAACATCTGGCGGAAATGTACTCGCCGAACACATCAACCTCTTCAGCATGGGAGTTGGTATCCACATTAAGACAAACATTGGAAGAGGAGGACTTATCAAGAATATAACAGTGTCTAATGTGTATATAGAAAATTCAAGGCAAGGAATAAAAATTGCTGGTGATGTAGGTGACCATCCGGATCAAAAATTTAACCCAAATGCTCTACCAGTTGTGAAGGGAATTACAATTAAGAGTGTTTTGCAAGCTGGTTTGATACATGGTTTAAGAAATTCACCTTTTACTGAGATTTGTTTCTATGATATTAACCTTCATGGTGAGACAGGATCAGGTAGATCTCCACCTTGGAAGTGTTCTGATGTTTTTGGATTTTCACAAAAGGTAAACCGGTTGCATGAATTCACTCCACCTGAACCTGCTTTGTGCATTGGAGGTGTGCTAATAGTGGAGTTGCGTTGGGGAGCTCAAAAACGAAGACTCTTCAACTACATAGGAGGCGAAGATGGTGCTCGACTGACAATATTTGTGATGTACCAAGCTATGAGAGGCAATGATGGTACCCAACCTAGTGTGGAAAAGAGTTTTGGGTTGACATATGTGTACTTGACTTTATACATTATATTCATTTGA

Protein sequence

>Msa0450780

RLWNWPLIAPLPSYGRGRELPGGRYICFIHGDGVRDVRMEQLMGKEMYGGTCGGKRTLQFTRPNLVEFLNSRNIIISNFIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGISYGRPSNGITIRRITGSSPFAGIAVGSETSGGNVLAEHINLFSMGVGIHIKTNIGRGGLIKNITVSNVYIENSRQGIKIAGDVGDHPDQKFNPNALPVVKGITIKSVLQAGLIHGLRNSPFTEICFYDINLHGETGSGRSPPWKCSDVFGFSQKVNRLHEFTPPEPALCIGGVLIVELRWGAQKRRLFNYIGGEDGARLTIFVMYQAMRGNDGTQPSVEKSFGLTYVYLTLYIIFI*