AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014234

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014234.t1 MTR_3g117500 97.149 491 10 2 1 491 1 487 0.0 984
MS.gene014234.t1 MTR_8g104820 61.966 468 172 4 27 491 29 493 0.0 601
MS.gene014234.t1 MTR_3g080810 57.602 467 194 3 23 488 30 493 0.0 559
MS.gene014234.t1 MTR_3g010330 57.082 466 191 5 28 491 25 483 0.0 530
MS.gene014234.t1 MTR_4g035975 54.970 493 204 7 6 488 5 489 0.0 523
MS.gene014234.t1 MTR_4g035955 53.361 476 211 6 14 488 1 466 0.0 520
MS.gene014234.t1 MTR_1g088190 56.277 462 181 3 27 488 38 478 0.0 520
MS.gene014234.t1 MTR_4g035930 52.211 475 219 4 14 488 1 467 0.0 516
MS.gene014234.t1 MTR_8g099410 50.427 468 221 6 26 486 26 489 3.76e-164 474
MS.gene014234.t1 MTR_8g099410 50.427 468 221 6 26 486 26 489 9.57e-163 475
MS.gene014234.t1 MTR_5g010000 51.188 463 212 6 27 486 39 490 2.02e-162 469
MS.gene014234.t1 MTR_5g009970 48.180 467 228 6 27 490 40 495 3.76e-156 453
MS.gene014234.t1 MTR_3g080190 47.035 489 245 7 9 489 24 506 1.23e-153 448
MS.gene014234.t1 MTR_5g085730 42.742 496 268 8 3 489 9 497 1.38e-147 432
MS.gene014234.t1 MTR_5g093590 44.196 491 261 7 5 486 12 498 5.84e-145 425
MS.gene014234.t1 MTR_1g037340 47.228 487 241 10 9 489 6 482 1.48e-142 418
MS.gene014234.t1 MTR_3g105230 43.568 482 253 8 3 478 1 469 5.01e-142 417
MS.gene014234.t1 MTR_4g074960 46.681 467 237 6 28 486 28 490 9.69e-142 421
MS.gene014234.t1 MTR_3g023740 44.672 488 250 7 1 486 8 477 4.58e-139 409
MS.gene014234.t1 MTR_5g009970 45.540 426 218 6 68 490 7 421 2.08e-132 390
MS.gene014234.t1 MTR_3g113720 42.827 474 250 10 27 489 56 519 1.39e-120 363
MS.gene014234.t1 MTR_5g009970 44.444 405 211 6 89 490 1 394 6.28e-120 357
MS.gene014234.t1 MTR_8g075990 42.283 473 252 8 29 490 64 526 6.25e-116 352
MS.gene014234.t1 MTR_1g088190 56.352 307 113 3 27 333 38 323 1.13e-108 327
MS.gene014234.t1 MTR_5g009970 44.510 337 174 5 156 490 1 326 2.38e-95 292
MS.gene014234.t1 MTR_2g028480 39.096 509 264 16 10 485 91 586 5.64e-89 285
MS.gene014234.t1 MTR_3g082440 38.193 487 258 17 28 485 116 588 3.92e-86 277
MS.gene014234.t1 MTR_3g090540 35.306 507 290 16 7 485 84 580 3.38e-85 274
MS.gene014234.t1 MTR_7g108925 55.769 156 69 0 333 488 43 198 4.12e-60 197
MS.gene014234.t1 MTR_0393s0050 56.944 144 61 1 333 475 20 163 1.22e-50 171
MS.gene014234.t1 MTR_1g037320 46.243 173 87 3 89 259 1 169 4.71e-33 127
MS.gene014234.t1 MTR_1g037320 49.593 123 60 2 365 486 168 289 4.33e-31 122
MS.gene014234.t1 MTR_4g128810 30.556 252 128 8 243 485 117 330 4.97e-25 106
MS.gene014234.t1 MTR_7g108920 50.538 93 45 1 239 331 86 177 2.04e-20 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014234.t1 AT4G39010 74.468 470 119 1 23 491 24 493 0.0 744
MS.gene014234.t1 AT1G70710 60.081 491 191 3 3 491 1 488 0.0 615
MS.gene014234.t1 AT4G39000 57.819 486 204 1 7 491 4 489 0.0 591
MS.gene014234.t1 AT1G23210 57.230 491 205 3 3 491 1 488 0.0 590
MS.gene014234.t1 AT4G38990 57.377 488 199 4 10 491 8 492 0.0 578
MS.gene014234.t1 AT4G39010 72.253 364 100 1 23 385 24 387 0.0 572
MS.gene014234.t1 AT4G02290 58.874 462 187 2 27 488 51 509 0.0 571
MS.gene014234.t1 AT1G02800 59.660 471 185 3 18 488 33 498 0.0 565
MS.gene014234.t1 AT1G22880 55.144 486 210 4 7 491 3 481 0.0 516
MS.gene014234.t1 AT1G71380 54.545 484 211 5 8 490 5 480 5.94e-180 513
MS.gene014234.t1 AT4G02290 57.250 400 168 2 89 488 1 397 8.91e-167 477
MS.gene014234.t1 AT4G09740 49.691 485 228 6 12 491 4 477 5.06e-159 460
MS.gene014234.t1 AT4G11050 48.632 475 233 6 23 490 21 491 8.66e-159 462
MS.gene014234.t1 AT4G11050 48.632 475 233 6 23 490 21 491 7.09e-158 462
MS.gene014234.t1 AT4G11050 48.632 475 233 6 23 490 21 491 9.83e-158 462
MS.gene014234.t1 AT4G23560 48.454 485 237 5 9 491 4 477 6.29e-157 454
MS.gene014234.t1 AT1G64390 48.832 471 230 6 23 486 20 486 1.97e-156 458
MS.gene014234.t1 AT1G22880 55.446 404 172 4 89 491 1 397 1.01e-151 438
MS.gene014234.t1 AT2G32990 44.266 497 258 7 6 486 9 502 5.24e-148 434
MS.gene014234.t1 AT2G44540 46.362 481 245 7 11 486 16 488 3.82e-139 410
MS.gene014234.t1 AT2G44570 47.433 487 240 9 6 486 13 489 6.29e-139 409
MS.gene014234.t1 AT2G44550 46.998 483 240 9 9 486 16 487 8.34e-139 409
MS.gene014234.t1 AT2G44560 46.362 481 245 7 11 486 16 488 1.52e-136 403
MS.gene014234.t1 AT3G43860 45.161 465 240 6 28 490 34 485 5.47e-135 399
MS.gene014234.t1 AT3G43860 45.161 465 240 6 28 490 34 485 5.47e-135 399
MS.gene014234.t1 AT4G38990 55.618 356 129 3 10 364 8 335 2.41e-134 392
MS.gene014234.t1 AT1G48930 47.109 467 236 6 27 486 29 491 2.48e-132 397
MS.gene014234.t1 AT1G75680 45.852 458 231 8 29 479 58 505 6.79e-128 382
MS.gene014234.t1 AT1G19940 42.918 466 249 8 25 483 45 500 7.74e-123 369
MS.gene014234.t1 AT1G19940 42.918 466 249 8 25 483 45 500 7.74e-123 369
MS.gene014234.t1 AT1G22880 54.878 328 140 4 7 333 3 323 9.68e-111 332
MS.gene014234.t1 AT2G44570 43.890 401 210 8 6 401 13 403 6.86e-94 291
MS.gene014234.t1 AT1G19940 42.005 369 201 7 25 386 45 407 6.34e-88 276
MS.gene014234.t1 AT5G49720 37.718 517 276 16 3 485 79 583 7.52e-83 268
MS.gene014234.t1 AT1G65610 35.391 486 274 14 28 486 116 588 6.28e-81 263
MS.gene014234.t1 AT4G24260 36.327 490 268 16 28 486 108 584 1.17e-69 234
MS.gene014234.t1 AT4G24260 34.872 390 214 15 28 386 108 488 6.88e-41 153
MS.gene014234.t1 AT4G24260 36.562 320 168 12 28 319 108 420 1.57e-39 149
MS.gene014234.t1 AT3G42153 42.708 96 47 3 240 331 16 107 7.11e-15 71.2

Find 135 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGTGATAACATCAAATT+TGG 0.145877 3.3:+95409900 MS.gene014234:CDS
GAGATTCAACATTTCCTTCT+AGG 0.166797 3.3:-95412878 None:intergenic
CTGTTTGTGTCCATGTCTTC+TGG 0.223582 3.3:-95411057 None:intergenic
TTCAATATGCAGACAGTTAC+AGG 0.227377 3.3:+95411223 MS.gene014234:CDS
ATGTGTGAACTTGATGTTTC+AGG 0.237520 3.3:-95412948 None:intergenic
CATTGCTTTGAATGTAGTTT+AGG 0.285334 3.3:-95412497 None:intergenic
ATAAACATTGCCACAATTGA+TGG 0.289598 3.3:-95413087 None:intergenic
CTCATCTCTACCTTCTATTA+AGG 0.295970 3.3:+95413238 MS.gene014234:CDS
ACAGAAGTGGCGTGGGAATT+CGG 0.323001 3.3:+95409824 MS.gene014234:CDS
TTCTTTGAAGGACAACGTTC+GGG 0.326700 3.3:+95409780 MS.gene014234:CDS
CAGAAGTGGCGTGGGAATTC+GGG 0.333466 3.3:+95409825 MS.gene014234:CDS
TATATTAATGCGCCATTTGT+TGG 0.343277 3.3:+95413419 MS.gene014234:CDS
TTATCTTACATGGTTGGTTA+TGG 0.346424 3.3:+95413182 MS.gene014234:CDS
AAAGCGTTTCTGAGTTCATT+AGG 0.346536 3.3:-95409990 None:intergenic
ATATTAATGCGCCATTTGTT+GGG 0.347405 3.3:+95413420 MS.gene014234:CDS
CCCCTTGGGTTTATCTTACA+TGG 0.349502 3.3:+95413172 MS.gene014234:CDS
CCTAACCCAAATGTTCTTGT+AGG 0.353533 3.3:+95413317 MS.gene014234:CDS
GAGTAATGTCTCAGAATAAC+CGG 0.358072 3.3:-95411181 None:intergenic
CCATCAAAATCACAATAATA+AGG 0.363676 3.3:-95411288 None:intergenic
ATAGCTCCTACAAGAACATT+TGG 0.366293 3.3:-95413323 None:intergenic
TCTCCGGCGACATCGGAAGC+TGG 0.368714 3.3:-95411108 None:intergenic
TGACGTGCGAGATAAGTAAT+TGG 0.370872 3.3:-95413060 None:intergenic
TCGTGGAGTGTGATTGAGTT+TGG 0.383558 3.3:+95409954 MS.gene014234:CDS
AACAAACAACAACGATTTGC+TGG 0.392456 3.3:-95409676 None:intergenic
TTGTACAGGACGAATTGTTA+TGG 0.396581 3.3:+95412433 MS.gene014234:intron
CCTACAAGAACATTTGGGTT+AGG 0.401102 3.3:-95413317 None:intergenic
CGCACTTGCTGCTTCTTCGA+TGG 0.401999 3.3:+95411140 MS.gene014234:CDS
TATGGGGAGCCGCATGGTTA+AGG 0.403036 3.3:+95412451 MS.gene014234:CDS
GTTCTTTGAAGGACAACGTT+CGG 0.406507 3.3:+95409779 MS.gene014234:CDS
CAGAAGACATGGACACAAAC+AGG 0.408396 3.3:+95411058 MS.gene014234:CDS
TGTACAGGACGAATTGTTAT+GGG 0.417837 3.3:+95412434 MS.gene014234:intron
TCCCACGCCACTTCTGTCTC+TGG 0.419554 3.3:-95409818 None:intergenic
TGTTAGTGCACAAACACTTC+GGG 0.420044 3.3:+95413109 MS.gene014234:CDS
AAGTGCGGCGGCTGTTTCTC+CGG 0.426242 3.3:-95411124 None:intergenic
ACTTACAACACTGATCTTAC+CGG 0.429293 3.3:+95409864 MS.gene014234:CDS
GGGAATTCGGGTTTGAGTGA+TGG 0.430739 3.3:+95409837 MS.gene014234:CDS
CACTTCTGTCTCTGGTCCTC+TGG 0.435129 3.3:-95409810 None:intergenic
CTACTACTGGTGATGCTGAT+TGG 0.435595 3.3:+95409699 MS.gene014234:CDS
GTTGTTGTTTGTTCTACTAC+TGG 0.438724 3.3:+95409686 MS.gene014234:CDS
GGAATTCGGGTTTGAGTGAT+GGG 0.438904 3.3:+95409838 MS.gene014234:CDS
GCGACATCGGAAGCTGGGTT+AGG 0.440796 3.3:-95411102 None:intergenic
TTGTTATAGGAAGTCCTAGA+AGG 0.447365 3.3:+95412864 MS.gene014234:intron
GGCTGTTTCTCCGGCGACAT+CGG 0.450417 3.3:-95411115 None:intergenic
TTGGGTTTATCTTACATGGT+TGG 0.457905 3.3:+95413176 MS.gene014234:CDS
AATGTAATCAACTTGTCTCT+TGG 0.459625 3.3:-95413138 None:intergenic
CAGTGACAATGCTGATGTTA+AGG 0.460357 3.3:+95411254 MS.gene014234:CDS
ATTACTCAGAAATGCTGTTA+AGG 0.461567 3.3:+95411197 MS.gene014234:CDS
ACGCTTTGGTCGCAATTCGT+TGG 0.466420 3.3:+95410006 MS.gene014234:CDS
GGAGCTATTGTGGGAGGACC+TGG 0.473308 3.3:+95413338 MS.gene014234:CDS
ATGGTTAAGGAGGGCTACTC+AGG 0.477602 3.3:+95412464 MS.gene014234:CDS
TAGCTCCTACAAGAACATTT+GGG 0.479600 3.3:-95413322 None:intergenic
TTATACTTCCAAAATGGCAT+TGG 0.482936 3.3:+95409653 None:intergenic
TAATGAACTCAGAAACGCTT+TGG 0.483275 3.3:+95409992 MS.gene014234:CDS
AAGGCAATCATGTTCTTTGA+AGG 0.484150 3.3:+95409768 MS.gene014234:CDS
GAAGACAACATTAATGAGTT+CGG 0.484613 3.3:+95412537 MS.gene014234:CDS
TGAGGATGGTCCTTAATAGA+AGG 0.486620 3.3:-95413248 None:intergenic
CAACAGTTGTGGTCTGAGGT+TGG 0.488075 3.3:-95411027 None:intergenic
CTCCGGCGACATCGGAAGCT+GGG 0.490926 3.3:-95411107 None:intergenic
CCGGTGATAACATCAAATTT+GGG 0.494860 3.3:+95409901 MS.gene014234:CDS
ACAACATTAATGAGTTCGGT+TGG 0.496036 3.3:+95412541 MS.gene014234:CDS
TTCGATGGCATTCCGATCAT+CGG 0.503475 3.3:+95411155 MS.gene014234:CDS
TGTTGTAAGTTGCTTCCACC+TGG 0.503502 3.3:-95413002 None:intergenic
AACCTCAGACCACAACTGTT+GGG 0.503584 3.3:+95411029 MS.gene014234:CDS
CTCCCAACAGTTGTGGTCTG+AGG 0.506354 3.3:-95411031 None:intergenic
TGTTCTTGTAGGAGCTATTG+TGG 0.507021 3.3:+95413328 MS.gene014234:CDS
CCCAAATTTGATGTTATCAC+CGG 0.511014 3.3:-95409901 None:intergenic
TATGCTAAAACCCCAACAAA+TGG 0.511723 3.3:-95413431 None:intergenic
CAACCTCAGACCACAACTGT+TGG 0.514008 3.3:+95411028 MS.gene014234:CDS
TCCTCAACAGATTGCATGCA+AGG 0.516979 3.3:+95413265 MS.gene014234:CDS
CCTCAACGTTCTTGTCTCCA+AGG 0.518942 3.3:+95412581 MS.gene014234:CDS
ATGATGTTTATGTGGATGAC+AGG 0.521412 3.3:+95413366 MS.gene014234:CDS
CAACAGATTGCATGCAAGGA+AGG 0.522778 3.3:+95413269 MS.gene014234:CDS
CAACATTAATGAGTTCGGTT+GGG 0.522809 3.3:+95412542 MS.gene014234:CDS
CTGGCCTCTCCCAACAGTTG+TGG 0.526446 3.3:-95411038 None:intergenic
ATGTTAGTGCACAAACACTT+CGG 0.530340 3.3:+95413108 MS.gene014234:CDS
AAATGGCGCATTAATATATG+TGG 0.534377 3.3:-95413414 None:intergenic
CTAAACTACATTCAAAGCAA+TGG 0.537231 3.3:+95412498 MS.gene014234:CDS
TCCTTGCATGCAATCTGTTG+AGG 0.537233 3.3:-95413266 None:intergenic
GGGGAGCCGCATGGTTAAGG+AGG 0.537973 3.3:+95412454 MS.gene014234:CDS
CATCAAATTTGGGTTTCCGA+TGG 0.547688 3.3:+95409911 MS.gene014234:CDS
GACCAGAGACAGAAGTGGCG+TGG 0.550720 3.3:+95409816 MS.gene014234:CDS
AATAACCGGGATCCGATGAT+CGG 0.551697 3.3:-95411167 None:intergenic
GTTCTTGTAGGAGCTATTGT+GGG 0.555313 3.3:+95413329 MS.gene014234:CDS
TCAATATGCAGACAGTTACA+GGG 0.557642 3.3:+95411224 MS.gene014234:CDS
TCACACATCGAGTACACTCC+TGG 0.560468 3.3:+95412963 MS.gene014234:CDS
TTGGGAGAGGCCAGAAGACA+TGG 0.561765 3.3:+95411047 MS.gene014234:CDS
GGTTGGGACAACAAGCATGC+TGG 0.562101 3.3:+95412558 MS.gene014234:CDS
ATTGTTGTCGTAAACGCCAT+CGG 0.566271 3.3:-95409927 None:intergenic
ACATAAACATCATCTTCTCC+AGG 0.567710 3.3:-95413356 None:intergenic
TATTAATGCGCCATTTGTTG+GGG 0.570106 3.3:+95413421 MS.gene014234:CDS
ACCAGAGACAGAAGTGGCGT+GGG 0.571423 3.3:+95409817 MS.gene014234:CDS
CTACTGGTGATGCTGATTGG+AGG 0.572389 3.3:+95409702 MS.gene014234:CDS
ATTCGGGTTTGAGTGATGGG+TGG 0.574191 3.3:+95409841 MS.gene014234:CDS
CAAAGCAATGGTAAAACACT+CGG 0.575426 3.3:+95412510 MS.gene014234:CDS
ACCGGCGGTTACTACGACGC+CGG 0.576662 3.3:+95409882 MS.gene014234:CDS
AACCCAGCTTCCGATGTCGC+CGG 0.578286 3.3:+95411105 MS.gene014234:CDS
GGCGCATTAATATATGTGGT+TGG 0.580585 3.3:-95413410 None:intergenic
CTTGTAGGAGCTATTGTGGG+AGG 0.586975 3.3:+95413332 MS.gene014234:CDS
TGGAGAAGATGATGTTTATG+TGG 0.587154 3.3:+95413358 MS.gene014234:CDS
CATCGAAGAAGCAGCAAGTG+CGG 0.597641 3.3:-95411139 None:intergenic
AATTGTTATGGGGAGCCGCA+TGG 0.602591 3.3:+95412445 MS.gene014234:CDS
GCATAGGAAGCTCTCTGCTG+AGG 0.604029 3.3:-95412916 None:intergenic
TGCATGCAATCTGTTGAGGA+TGG 0.606925 3.3:-95413262 None:intergenic
GCATTCCGATCATCGGATCC+CGG 0.607253 3.3:+95411162 MS.gene014234:CDS
GGTCTGTATATGAGTCCACC+AGG 0.612971 3.3:-95412981 None:intergenic
TTTCAGGTAGTAGTGTGCAT+AGG 0.626912 3.3:-95412932 None:intergenic
CGAAGAAGCAGCAAGTGCGG+CGG 0.628435 3.3:-95411136 None:intergenic
GCGTTTCTGAGTTCATTAGG+AGG 0.634386 3.3:-95409987 None:intergenic
AACCATGTAAGATAAACCCA+AGG 0.635575 3.3:-95413174 None:intergenic
AATTGGCGTAGACTAACTCA+AGG 0.637923 3.3:-95413043 None:intergenic
CAGACCACAACTGTTGGGAG+AGG 0.640454 3.3:+95411034 MS.gene014234:CDS
CAGAGGACCAGAGACAGAAG+TGG 0.641335 3.3:+95409811 MS.gene014234:CDS
ACCATGTAAGATAAACCCAA+GGG 0.641726 3.3:-95413173 None:intergenic
ACGTCACAAACCATCAATTG+TGG 0.642957 3.3:+95413077 MS.gene014234:CDS
TACAACACTGATCTTACCGG+CGG 0.646779 3.3:+95409867 MS.gene014234:CDS
TTACGACAACAATGTTGTCG+TGG 0.652135 3.3:+95409937 MS.gene014234:CDS
GACAATGCTGATGTTAAGGA+TGG 0.656075 3.3:+95411258 MS.gene014234:CDS
ACCGGCGTCGTAGTAACCGC+CGG 0.660182 3.3:-95409883 None:intergenic
AGTAATGTCTCAGAATAACC+GGG 0.665758 3.3:-95411180 None:intergenic
GTACAGGACGAATTGTTATG+GGG 0.670217 3.3:+95412435 MS.gene014234:intron
TTATGCGGAGGCATTATCGA+AGG 0.671544 3.3:+95409749 MS.gene014234:CDS
CACATCGAGTACACTCCTGG+TGG 0.672404 3.3:+95412966 MS.gene014234:CDS
TCTTTGAAGGACAACGTTCG+GGG 0.677942 3.3:+95409781 MS.gene014234:CDS
GGTGGACTCATATACAGACC+AGG 0.680214 3.3:+95412984 MS.gene014234:CDS
GGGAGCCGCATGGTTAAGGA+GGG 0.683185 3.3:+95412455 MS.gene014234:CDS
CAATATGCAGACAGTTACAG+GGG 0.695263 3.3:+95411225 MS.gene014234:CDS
CCACGATGATGAATACGTTG+TGG 0.695422 3.3:-95413215 None:intergenic
TGTGAATGCACATGATTATG+CGG 0.701086 3.3:+95409734 MS.gene014234:CDS
GGACTCATATACAGACCAGG+TGG 0.718917 3.3:+95412987 MS.gene014234:CDS
CCTTGGAGACAAGAACGTTG+AGG 0.724038 3.3:-95412581 None:intergenic
CCACAACGTATTCATCATCG+TGG 0.724350 3.3:+95413215 MS.gene014234:CDS
TGATGTTTATGTGGATGACA+GGG 0.726322 3.3:+95413367 MS.gene014234:CDS
CCATGTAAGATAAACCCAAG+GGG 0.735452 3.3:-95413172 None:intergenic
AGTAGCCCTCCTTAACCATG+CGG 0.745611 3.3:-95412460 None:intergenic
GAATGCACATGATTATGCGG+AGG 0.747781 3.3:+95409737 MS.gene014234:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+AGG - chr3.3:95410206-95410225 None:intergenic 0.0%
!! AATTTGATTGTATAAAAAAA+CGG + chr3.3:95410493-95410512 MS.gene014234:intron 10.0%
!! ATATTAGATATATCAAAAAA+TGG + chr3.3:95410910-95410929 MS.gene014234:intron 10.0%
!! ATTAGTTAATTAATTAAAAG+TGG + chr3.3:95412107-95412126 MS.gene014234:intron 10.0%
!! ATTCTCATTAATTTAAAAAT+TGG - chr3.3:95410861-95410880 None:intergenic 10.0%
!! TTAATCAAAAAAGAAATTTA+CGG + chr3.3:95410269-95410288 MS.gene014234:intron 10.0%
!!! TAAATTTCTTTTTTGATTAA+GGG - chr3.3:95410269-95410288 None:intergenic 10.0%
!!! TTCTAATAATAAATACTTTT+TGG + chr3.3:95411679-95411698 MS.gene014234:intron 10.0%
!! AAATAAATAAATAAAGGAAG+AGG - chr3.3:95410200-95410219 None:intergenic 15.0%
!! TCATTAATTTAAAAATTGGA+TGG - chr3.3:95410857-95410876 None:intergenic 15.0%
!! TCTAAAAAGTAAAATACAAA+TGG - chr3.3:95410428-95410447 None:intergenic 15.0%
!!! GAATTTAGAATTATAAAAAC+AGG + chr3.3:95411718-95411737 MS.gene014234:intron 15.0%
!!! GTAAATTTCTTTTTTGATTA+AGG - chr3.3:95410270-95410289 None:intergenic 15.0%
!! AAAAGTAAAATACAAATGGA+AGG - chr3.3:95410424-95410443 None:intergenic 20.0%
!! AAAATTCAAAACGATAACAT+CGG - chr3.3:95411390-95411409 None:intergenic 20.0%
!! AAATTTGAATTGAATAGAGA+TGG - chr3.3:95412609-95412628 None:intergenic 20.0%
!! CAAAAAAAAAAAACTGAAAG+CGG - chr3.3:95410377-95410396 None:intergenic 20.0%
!! CCTAAATCAATTTATTGAAA+TGG + chr3.3:95410296-95410315 MS.gene014234:intron 20.0%
!! GTATTCATTTCATATCATAT+GGG + chr3.3:95411609-95411628 MS.gene014234:intron 20.0%
!! TAAATTGAATAGTGCATATT+TGG - chr3.3:95411943-95411962 None:intergenic 20.0%
!! TAAGGTTTGAAAAATATAAG+CGG + chr3.3:95411793-95411812 MS.gene014234:intron 20.0%
!! TATTAGAAATTGAGTGTAAA+AGG - chr3.3:95411667-95411686 None:intergenic 20.0%
!! TGTATTCATTTCATATCATA+TGG + chr3.3:95411608-95411627 MS.gene014234:intron 20.0%
!! TTGTTCACATTTAGAAATAT+AGG + chr3.3:95410394-95410413 MS.gene014234:intron 20.0%
!!! ACATTGATAATGATAGTATA+TGG + chr3.3:95411421-95411440 MS.gene014234:intron 20.0%
!!! AGTAAATGAATTGTTGTTAT+AGG + chr3.3:95412851-95412870 MS.gene014234:intron 20.0%
!!! ATTGCATTTTTCCTTTTTAT+AGG + chr3.3:95411361-95411380 MS.gene014234:intron 20.0%
!!! CCATTTCAATAAATTGATTT+AGG - chr3.3:95410299-95410318 None:intergenic 20.0%
!!! TCAAAATCATCATTTTTCTT+AGG - chr3.3:95410561-95410580 None:intergenic 20.0%
! AAATAAATAAAGGAAGAGGA+AGG - chr3.3:95410196-95410215 None:intergenic 25.0%
! CAATCAACATCGAATTATAT+AGG + chr3.3:95412238-95412257 MS.gene014234:intron 25.0%
! CATTCAATTAATGATGTATG+TGG + chr3.3:95410450-95410469 MS.gene014234:intron 25.0%
! CCATCAAAATCACAATAATA+AGG - chr3.3:95411291-95411310 None:intergenic 25.0%
! GATCGTAAATGTAAATAAAC+TGG - chr3.3:95410355-95410374 None:intergenic 25.0%
! GTAGTGATGACAAAAATAAA+GGG - chr3.3:95410589-95410608 None:intergenic 25.0%
! GTATACAGTTATAATCGAAA+CGG - chr3.3:95410801-95410820 None:intergenic 25.0%
! TATTACTAGTACTATGTGAA+GGG + chr3.3:95412301-95412320 MS.gene014234:intron 25.0%
! TGATTGTATAAAAAAACGGA+GGG + chr3.3:95410497-95410516 MS.gene014234:intron 25.0%
! TGTACATGCTACTATATATT+AGG + chr3.3:95410996-95411015 MS.gene014234:intron 25.0%
! TGTAGTGATGACAAAAATAA+AGG - chr3.3:95410590-95410609 None:intergenic 25.0%
! TTATTACTAGTACTATGTGA+AGG + chr3.3:95412300-95412319 MS.gene014234:intron 25.0%
! TTGATTGTATAAAAAAACGG+AGG + chr3.3:95410496-95410515 MS.gene014234:intron 25.0%
!! CCTTATTATTGTGATTTTGA+TGG + chr3.3:95411288-95411307 MS.gene014234:CDS 25.0%
!! CTATTTGCTACACTATTAAT+TGG + chr3.3:95412395-95412414 MS.gene014234:intron 25.0%
!!! AAATGGTTGATGACAAAATT+TGG + chr3.3:95410927-95410946 MS.gene014234:intron 25.0%
!!! AGACAAGTTGATTACATTTT+AGG + chr3.3:95413143-95413162 MS.gene014234:CDS 25.0%
!!! TATTTTTGTCATCACTACAA+AGG + chr3.3:95410591-95410610 MS.gene014234:intron 25.0%
AAATGGCGCATTAATATATG+TGG - chr3.3:95413417-95413436 None:intergenic 30.0%
AACATCGGATACCTATAAAA+AGG - chr3.3:95411375-95411394 None:intergenic 30.0%
AACTATACTACTTACTAACC+TGG - chr3.3:95411317-95411336 None:intergenic 30.0%
AATGTAATCAACTTGTCTCT+TGG - chr3.3:95413141-95413160 None:intergenic 30.0%
ACAATTTACTACTGAATCGT+TGG + chr3.3:95410085-95410104 MS.gene014234:intron 30.0%
ACATGCTACTATATATTAGG+TGG + chr3.3:95410999-95411018 MS.gene014234:intron 30.0%
AGTTATAATCGAAACGGAAA+TGG - chr3.3:95410795-95410814 None:intergenic 30.0%
ATAAACATTGCCACAATTGA+TGG - chr3.3:95413090-95413109 None:intergenic 30.0%
ATATTAATGCGCCATTTGTT+GGG + chr3.3:95413420-95413439 MS.gene014234:CDS 30.0%
ATTACTAGTACTATGTGAAG+GGG + chr3.3:95412302-95412321 MS.gene014234:intron 30.0%
ATTACTCAGAAATGCTGTTA+AGG + chr3.3:95411197-95411216 MS.gene014234:CDS 30.0%
ATTGTACCTGAACAAAAATG+CGG - chr3.3:95410070-95410089 None:intergenic 30.0%
CAATTTACTACTGAATCGTT+GGG + chr3.3:95410086-95410105 MS.gene014234:intron 30.0%
CATGCTACTATATATTAGGT+GGG + chr3.3:95411000-95411019 MS.gene014234:intron 30.0%
CTAAACTACATTCAAAGCAA+TGG + chr3.3:95412498-95412517 MS.gene014234:CDS 30.0%
GAAGACAACATTAATGAGTT+CGG + chr3.3:95412537-95412556 MS.gene014234:CDS 30.0%
GTTTGAAAAATATAAGCGGT+GGG + chr3.3:95411797-95411816 MS.gene014234:intron 30.0%
TAGAAATTGAGTGTAAAAGG+TGG - chr3.3:95411664-95411683 None:intergenic 30.0%
TATATTAATGCGCCATTTGT+TGG + chr3.3:95413419-95413438 MS.gene014234:CDS 30.0%
TGCTACACTATTAATTGGTT+TGG + chr3.3:95412400-95412419 MS.gene014234:intron 30.0%
TTGGATACATTACATTGTAC+AGG + chr3.3:95412419-95412438 MS.gene014234:intron 30.0%
! AATTGCATCTCGAGAATTTT+TGG + chr3.3:95412184-95412203 MS.gene014234:intron 30.0%
! ACAAGTGATTTTGCGAAATA+AGG + chr3.3:95411775-95411794 MS.gene014234:intron 30.0%
! ATTTCATATCATATGGGCTA+TGG + chr3.3:95411615-95411634 MS.gene014234:intron 30.0%
! CATTGCTTTGAATGTAGTTT+AGG - chr3.3:95412500-95412519 None:intergenic 30.0%
! TTATCTTACATGGTTGGTTA+TGG + chr3.3:95413182-95413201 MS.gene014234:CDS 30.0%
!! AAATTTTCCGTGTCATTATG+TGG + chr3.3:95410673-95410692 MS.gene014234:intron 30.0%
!!! TTTGGAATTTTTTGCCAGTT+AGG + chr3.3:95411820-95411839 MS.gene014234:intron 30.0%
AAATCCGAAGCAAACTATTG+TGG + chr3.3:95411536-95411555 MS.gene014234:intron 35.0%
AACAAACAACAACGATTTGC+TGG - chr3.3:95409679-95409698 None:intergenic 35.0%
AACCATGTAAGATAAACCCA+AGG - chr3.3:95413177-95413196 None:intergenic 35.0%
AAGGCAATCATGTTCTTTGA+AGG + chr3.3:95409768-95409787 MS.gene014234:CDS 35.0%
AAGGGGTAATATTTGTCTGA+GGG + chr3.3:95412319-95412338 MS.gene014234:intron 35.0%
ACAACAAAGCTTCTGCAAAA+CGG - chr3.3:95411879-95411898 None:intergenic 35.0%
ACAACATTAATGAGTTCGGT+TGG + chr3.3:95412541-95412560 MS.gene014234:CDS 35.0%
ACATAAACATCATCTTCTCC+AGG - chr3.3:95413359-95413378 None:intergenic 35.0%
ACCATGTAAGATAAACCCAA+GGG - chr3.3:95413176-95413195 None:intergenic 35.0%
ACTTACAACACTGATCTTAC+CGG + chr3.3:95409864-95409883 MS.gene014234:CDS 35.0%
AGTAATGTCTCAGAATAACC+GGG - chr3.3:95411183-95411202 None:intergenic 35.0%
ATAGCTCCTACAAGAACATT+TGG - chr3.3:95413326-95413345 None:intergenic 35.0%
ATGATGTTTATGTGGATGAC+AGG + chr3.3:95413366-95413385 MS.gene014234:CDS 35.0%
ATGTGTGAACTTGATGTTTC+AGG - chr3.3:95412951-95412970 None:intergenic 35.0%
ATGTTAGTGCACAAACACTT+CGG + chr3.3:95413108-95413127 MS.gene014234:CDS 35.0%
ATTGAATAGAGATGGAACCT+TGG - chr3.3:95412601-95412620 None:intergenic 35.0%
CAAAGCAATGGTAAAACACT+CGG + chr3.3:95412510-95412529 MS.gene014234:CDS 35.0%
CAACATTAATGAGTTCGGTT+GGG + chr3.3:95412542-95412561 MS.gene014234:CDS 35.0%
CCCAAATTTGATGTTATCAC+CGG - chr3.3:95409904-95409923 None:intergenic 35.0%
CCGGTGATAACATCAAATTT+GGG + chr3.3:95409901-95409920 MS.gene014234:CDS 35.0%
CTCATCTCTACCTTCTATTA+AGG + chr3.3:95413238-95413257 MS.gene014234:CDS 35.0%
GAGATTCAACATTTCCTTCT+AGG - chr3.3:95412881-95412900 None:intergenic 35.0%
GAGTAATGTCTCAGAATAAC+CGG - chr3.3:95411184-95411203 None:intergenic 35.0%
GGTTTGAAAAATATAAGCGG+TGG + chr3.3:95411796-95411815 MS.gene014234:intron 35.0%
GTAACACTTCCATTATGTGT+CGG - chr3.3:95412161-95412180 None:intergenic 35.0%
TAACACTTCCATTATGTGTC+GGG - chr3.3:95412160-95412179 None:intergenic 35.0%
TAATGAACTCAGAAACGCTT+TGG + chr3.3:95409992-95410011 MS.gene014234:CDS 35.0%
TAGCTCCTACAAGAACATTT+GGG - chr3.3:95413325-95413344 None:intergenic 35.0%
TATGCTAAAACCCCAACAAA+TGG - chr3.3:95413434-95413453 None:intergenic 35.0%
TCAATATGCAGACAGTTACA+GGG + chr3.3:95411224-95411243 MS.gene014234:CDS 35.0%
TGATGTTTATGTGGATGACA+GGG + chr3.3:95413367-95413386 MS.gene014234:CDS 35.0%
TGGAGAAGATGATGTTTATG+TGG + chr3.3:95413358-95413377 MS.gene014234:CDS 35.0%
TGTACAGGACGAATTGTTAT+GGG + chr3.3:95412434-95412453 MS.gene014234:intron 35.0%
TGTGAATGCACATGATTATG+CGG + chr3.3:95409734-95409753 MS.gene014234:CDS 35.0%
TTCAATATGCAGACAGTTAC+AGG + chr3.3:95411223-95411242 MS.gene014234:CDS 35.0%
TTCTTAGGAACGACTAAACA+TGG - chr3.3:95410546-95410565 None:intergenic 35.0%
TTGAAGTCCGTGAATTTCAT+CGG + chr3.3:95410720-95410739 MS.gene014234:intron 35.0%
TTGGGTTTATCTTACATGGT+TGG + chr3.3:95413176-95413195 MS.gene014234:CDS 35.0%
TTGTACAGGACGAATTGTTA+TGG + chr3.3:95412433-95412452 MS.gene014234:intron 35.0%
TTGTTATAGGAAGTCCTAGA+AGG + chr3.3:95412864-95412883 MS.gene014234:intron 35.0%
! AAAAATATAAGCGGTGGGTT+TGG + chr3.3:95411802-95411821 MS.gene014234:intron 35.0%
! AAAGCGTTTCTGAGTTCATT+AGG - chr3.3:95409993-95410012 None:intergenic 35.0%
! TATTAATGCGCCATTTGTTG+GGG + chr3.3:95413421-95413440 MS.gene014234:CDS 35.0%
!! ATTTTAGGTGATAACCCCTT+GGG + chr3.3:95413158-95413177 MS.gene014234:CDS 35.0%
!! GTTGTTGTTTGTTCTACTAC+TGG + chr3.3:95409686-95409705 MS.gene014234:CDS 35.0%
!! TTGTGATTTTGATGGATACC+AGG + chr3.3:95411296-95411315 MS.gene014234:CDS 35.0%
!! TTTGCCACAATAGTTTGCTT+CGG - chr3.3:95411543-95411562 None:intergenic 35.0%
AATTGGCGTAGACTAACTCA+AGG - chr3.3:95413046-95413065 None:intergenic 40.0%
ACGTCACAAACCATCAATTG+TGG + chr3.3:95413077-95413096 MS.gene014234:CDS 40.0%
AGGGCAATTCGTGTATTTAG+TGG + chr3.3:95412338-95412357 MS.gene014234:intron 40.0%
ATAAACTGGCACAGCTATCA+AGG - chr3.3:95410341-95410360 None:intergenic 40.0%
ATGAGTAACACTGCCATGTT+TGG - chr3.3:95410831-95410850 None:intergenic 40.0%
ATTGTTGTCGTAAACGCCAT+CGG - chr3.3:95409930-95409949 None:intergenic 40.0%
CAATATGCAGACAGTTACAG+GGG + chr3.3:95411225-95411244 MS.gene014234:CDS 40.0%
CAGTGACAATGCTGATGTTA+AGG + chr3.3:95411254-95411273 MS.gene014234:CDS 40.0%
CCATGTAAGATAAACCCAAG+GGG - chr3.3:95413175-95413194 None:intergenic 40.0%
CCTAACCCAAATGTTCTTGT+AGG + chr3.3:95413317-95413336 MS.gene014234:CDS 40.0%
GAAGGGGTAATATTTGTCTG+AGG + chr3.3:95412318-95412337 MS.gene014234:intron 40.0%
GACAATGCTGATGTTAAGGA+TGG + chr3.3:95411258-95411277 MS.gene014234:CDS 40.0%
GATGAAATTCACGGACTTCA+AGG - chr3.3:95410721-95410740 None:intergenic 40.0%
GCCGGTGATAACATCAAATT+TGG + chr3.3:95409900-95409919 MS.gene014234:CDS 40.0%
GGCGCATTAATATATGTGGT+TGG - chr3.3:95413413-95413432 None:intergenic 40.0%
GTACAGGACGAATTGTTATG+GGG + chr3.3:95412435-95412454 MS.gene014234:intron 40.0%
GTTCTTGTAGGAGCTATTGT+GGG + chr3.3:95413329-95413348 MS.gene014234:CDS 40.0%
TGACGTGCGAGATAAGTAAT+TGG - chr3.3:95413063-95413082 None:intergenic 40.0%
TGAGGATGGTCCTTAATAGA+AGG - chr3.3:95413251-95413270 None:intergenic 40.0%
TGAGTGTAAAAGGTGGATGT+GGG - chr3.3:95411657-95411676 None:intergenic 40.0%
TGCAAAGCCGATGAAATTCA+CGG - chr3.3:95410730-95410749 None:intergenic 40.0%
TGTTAGTGCACAAACACTTC+GGG + chr3.3:95413109-95413128 MS.gene014234:CDS 40.0%
TGTTCTTGTAGGAGCTATTG+TGG + chr3.3:95413328-95413347 MS.gene014234:CDS 40.0%
TTACGACAACAATGTTGTCG+TGG + chr3.3:95409937-95409956 MS.gene014234:CDS 40.0%
TTGAGTGTAAAAGGTGGATG+TGG - chr3.3:95411658-95411677 None:intergenic 40.0%
! ATATCATATGGGCTATGGCA+TGG + chr3.3:95411620-95411639 MS.gene014234:intron 40.0%
! CATCAAATTTGGGTTTCCGA+TGG + chr3.3:95409911-95409930 MS.gene014234:CDS 40.0%
! CCTACAAGAACATTTGGGTT+AGG - chr3.3:95413320-95413339 None:intergenic 40.0%
! GTCTAACCGCATTTTTGTTC+AGG + chr3.3:95410061-95410080 MS.gene014234:CDS 40.0%
! GTTCTTTGAAGGACAACGTT+CGG + chr3.3:95409779-95409798 MS.gene014234:CDS 40.0%
! TAGAGTGTTTGATCACGTGA+AGG - chr3.3:95411464-95411483 None:intergenic 40.0%
! TATCATATGGGCTATGGCAT+GGG + chr3.3:95411621-95411640 MS.gene014234:intron 40.0%
! TTCTTTGAAGGACAACGTTC+GGG + chr3.3:95409780-95409799 MS.gene014234:CDS 40.0%
! TTTCAGGTAGTAGTGTGCAT+AGG - chr3.3:95412935-95412954 None:intergenic 40.0%
! TTTTGCCAGTTAGGACATGT+CGG + chr3.3:95411829-95411848 MS.gene014234:intron 40.0%
!! CATTTTAGGTGATAACCCCT+TGG + chr3.3:95413157-95413176 MS.gene014234:CDS 40.0%
AACCTCAGACCACAACTGTT+GGG + chr3.3:95411029-95411048 MS.gene014234:CDS 45.0%
AATAACCGGGATCCGATGAT+CGG - chr3.3:95411170-95411189 None:intergenic 45.0%
CAACAGATTGCATGCAAGGA+AGG + chr3.3:95413269-95413288 MS.gene014234:CDS 45.0%
CAGAAGACATGGACACAAAC+AGG + chr3.3:95411058-95411077 MS.gene014234:CDS 45.0%
CCACAACGTATTCATCATCG+TGG + chr3.3:95413215-95413234 MS.gene014234:CDS 45.0%
CCACGATGATGAATACGTTG+TGG - chr3.3:95413218-95413237 None:intergenic 45.0%
CCCCTTGGGTTTATCTTACA+TGG + chr3.3:95413172-95413191 MS.gene014234:CDS 45.0%
CTCCAGTCCACATAATGACA+CGG - chr3.3:95410683-95410702 None:intergenic 45.0%
CTGTTTGTGTCCATGTCTTC+TGG - chr3.3:95411060-95411079 None:intergenic 45.0%
GAATGCACATGATTATGCGG+AGG + chr3.3:95409737-95409756 MS.gene014234:CDS 45.0%
GAGTGAGTGAGAAAGAGAAG+TGG - chr3.3:95410156-95410175 None:intergenic 45.0%
GCGTTTCTGAGTTCATTAGG+AGG - chr3.3:95409990-95410009 None:intergenic 45.0%
GTTAGGACATGTCGGTGTAA+TGG + chr3.3:95411837-95411856 MS.gene014234:intron 45.0%
TACAACACTGATCTTACCGG+CGG + chr3.3:95409867-95409886 MS.gene014234:CDS 45.0%
TATCAAGGAAGAACGCACGA+TGG - chr3.3:95410326-95410345 None:intergenic 45.0%
TCCTCAACAGATTGCATGCA+AGG + chr3.3:95413265-95413284 MS.gene014234:CDS 45.0%
TCCTTGCATGCAATCTGTTG+AGG - chr3.3:95413269-95413288 None:intergenic 45.0%
TCGTGGAGTGTGATTGAGTT+TGG + chr3.3:95409954-95409973 MS.gene014234:CDS 45.0%
TGCATGCAATCTGTTGAGGA+TGG - chr3.3:95413265-95413284 None:intergenic 45.0%
TGTTGTAAGTTGCTTCCACC+TGG - chr3.3:95413005-95413024 None:intergenic 45.0%
TTACACCGACATGTCCTAAC+TGG - chr3.3:95411837-95411856 None:intergenic 45.0%
TTCGATGGCATTCCGATCAT+CGG + chr3.3:95411155-95411174 MS.gene014234:CDS 45.0%
TTGACTCACTCACTCACTCA+CGG + chr3.3:95410109-95410128 MS.gene014234:intron 45.0%
! CTACTACTGGTGATGCTGAT+TGG + chr3.3:95409699-95409718 MS.gene014234:CDS 45.0%
! GGAATTCGGGTTTGAGTGAT+GGG + chr3.3:95409838-95409857 MS.gene014234:CDS 45.0%
! TCTTTGAAGGACAACGTTCG+GGG + chr3.3:95409781-95409800 MS.gene014234:CDS 45.0%
! TTCCGTGTCATTATGTGGAC+TGG + chr3.3:95410678-95410697 MS.gene014234:intron 45.0%
!! TGTCATTATGTGGACTGGAG+TGG + chr3.3:95410683-95410702 MS.gene014234:intron 45.0%
!! TTATGCGGAGGCATTATCGA+AGG + chr3.3:95409749-95409768 MS.gene014234:CDS 45.0%
!!! TTTATTTATTTATTACATTT+TGG + chr3.3:95410213-95410232 MS.gene014234:intron 5.0%
AAAAAACAATTCGCCCCCCG+TGG + chr3.3:95412689-95412708 MS.gene014234:intron 50.0%
AAAAACAATTCGCCCCCCGT+GGG + chr3.3:95412690-95412709 MS.gene014234:intron 50.0%
AATTGTTATGGGGAGCCGCA+TGG + chr3.3:95412445-95412464 MS.gene014234:CDS 50.0%
ACAGAAGTGGCGTGGGAATT+CGG + chr3.3:95409824-95409843 MS.gene014234:CDS 50.0%
ACGCTTTGGTCGCAATTCGT+TGG + chr3.3:95410006-95410025 MS.gene014234:CDS 50.0%
AGGAAGAGGAAGGAGTGAGT+AGG - chr3.3:95410186-95410205 None:intergenic 50.0%
AGTAGCCCTCCTTAACCATG+CGG - chr3.3:95412463-95412482 None:intergenic 50.0%
ATGGTTAAGGAGGGCTACTC+AGG + chr3.3:95412464-95412483 MS.gene014234:CDS 50.0%
CAACCTCAGACCACAACTGT+TGG + chr3.3:95411028-95411047 MS.gene014234:CDS 50.0%
CACGTGATCCCGACACATAA+TGG + chr3.3:95412149-95412168 MS.gene014234:intron 50.0%
CATCGAAGAAGCAGCAAGTG+CGG - chr3.3:95411142-95411161 None:intergenic 50.0%
CCTCAACGTTCTTGTCTCCA+AGG + chr3.3:95412581-95412600 MS.gene014234:CDS 50.0%
CCTTGGAGACAAGAACGTTG+AGG - chr3.3:95412584-95412603 None:intergenic 50.0%
CGGACTTCAAGGATACGAAC+TGG - chr3.3:95410710-95410729 None:intergenic 50.0%
CTCTACCAACTGAGCTAGAC+GGG + chr3.3:95412749-95412768 MS.gene014234:intron 50.0%
CTTGTAGGAGCTATTGTGGG+AGG + chr3.3:95413332-95413351 MS.gene014234:CDS 50.0%
GCTCTACCAACTGAGCTAGA+CGG + chr3.3:95412748-95412767 MS.gene014234:intron 50.0%
GCTCTTAACCTTGTGGTCGT+GGG - chr3.3:95412723-95412742 None:intergenic 50.0%
GGACTCATATACAGACCAGG+TGG + chr3.3:95412987-95413006 MS.gene014234:CDS 50.0%
GGTCTGTATATGAGTCCACC+AGG - chr3.3:95412984-95413003 None:intergenic 50.0%
TCACACATCGAGTACACTCC+TGG + chr3.3:95412963-95412982 MS.gene014234:CDS 50.0%
! ACGTTCGGGGTTTTTACCAG+AGG + chr3.3:95409794-95409813 MS.gene014234:CDS 50.0%
! ATTCGGGTTTGAGTGATGGG+TGG + chr3.3:95409841-95409860 MS.gene014234:CDS 50.0%
! CAACAGTTGTGGTCTGAGGT+TGG - chr3.3:95411030-95411049 None:intergenic 50.0%
! CTACTGGTGATGCTGATTGG+AGG + chr3.3:95409702-95409721 MS.gene014234:CDS 50.0%
! GGGAATTCGGGTTTGAGTGA+TGG + chr3.3:95409837-95409856 MS.gene014234:CDS 50.0%
! GGTGGACTCATATACAGACC+AGG + chr3.3:95412984-95413003 MS.gene014234:CDS 50.0%
AAAACAATTCGCCCCCCGTG+GGG + chr3.3:95412691-95412710 MS.gene014234:intron 55.0%
ACCAGAGACAGAAGTGGCGT+GGG + chr3.3:95409817-95409836 MS.gene014234:CDS 55.0%
CACATCGAGTACACTCCTGG+TGG + chr3.3:95412966-95412985 MS.gene014234:CDS 55.0%
CACTTCTGTCTCTGGTCCTC+TGG - chr3.3:95409813-95409832 None:intergenic 55.0%
CAGAAGTGGCGTGGGAATTC+GGG + chr3.3:95409825-95409844 MS.gene014234:CDS 55.0%
CAGACCACAACTGTTGGGAG+AGG + chr3.3:95411034-95411053 MS.gene014234:CDS 55.0%
CAGAGGACCAGAGACAGAAG+TGG + chr3.3:95409811-95409830 MS.gene014234:CDS 55.0%
CTCACTCACTCACTCACGGA+CGG + chr3.3:95410113-95410132 MS.gene014234:intron 55.0%
CTCCCAACAGTTGTGGTCTG+AGG - chr3.3:95411034-95411053 None:intergenic 55.0%
GCATAGGAAGCTCTCTGCTG+AGG - chr3.3:95412919-95412938 None:intergenic 55.0%
GCATTCCGATCATCGGATCC+CGG + chr3.3:95411162-95411181 MS.gene014234:CDS 55.0%
GCGCAAGGCTCTTAACCTTG+TGG - chr3.3:95412730-95412749 None:intergenic 55.0%
GGCTCTTAACCTTGTGGTCG+TGG - chr3.3:95412724-95412743 None:intergenic 55.0%
GGTTGGGACAACAAGCATGC+TGG + chr3.3:95412558-95412577 MS.gene014234:CDS 55.0%
GTATACCCACGCGCCAAACA+TGG + chr3.3:95410815-95410834 MS.gene014234:intron 55.0%
TATGGGGAGCCGCATGGTTA+AGG + chr3.3:95412451-95412470 MS.gene014234:CDS 55.0%
TTGGGAGAGGCCAGAAGACA+TGG + chr3.3:95411047-95411066 MS.gene014234:CDS 55.0%
! AACAGCCCGTCTAGCTCAGT+TGG - chr3.3:95412757-95412776 None:intergenic 55.0%
! CGCACTTGCTGCTTCTTCGA+TGG + chr3.3:95411140-95411159 MS.gene014234:CDS 55.0%
!! AGCTCAGTTGGTAGAGCGCA+AGG - chr3.3:95412745-95412764 None:intergenic 55.0%
AACCCAGCTTCCGATGTCGC+CGG + chr3.3:95411105-95411124 MS.gene014234:CDS 60.0%
ACACTGCCATGTTTGGCGCG+TGG - chr3.3:95410824-95410843 None:intergenic 60.0%
CACTGCCATGTTTGGCGCGT+GGG - chr3.3:95410823-95410842 None:intergenic 60.0%
CGAAGAAGCAGCAAGTGCGG+CGG - chr3.3:95411139-95411158 None:intergenic 60.0%
CTGGCCTCTCCCAACAGTTG+TGG - chr3.3:95411041-95411060 None:intergenic 60.0%
GACCAGAGACAGAAGTGGCG+TGG + chr3.3:95409816-95409835 MS.gene014234:CDS 60.0%
GCGACATCGGAAGCTGGGTT+AGG - chr3.3:95411105-95411124 None:intergenic 60.0%
GGAGCTATTGTGGGAGGACC+TGG + chr3.3:95413338-95413357 MS.gene014234:CDS 60.0%
GGGAGCCGCATGGTTAAGGA+GGG + chr3.3:95412455-95412474 MS.gene014234:CDS 60.0%
TCCCACGCCACTTCTGTCTC+TGG - chr3.3:95409821-95409840 None:intergenic 60.0%
!! AAGTGCGGCGGCTGTTTCTC+CGG - chr3.3:95411127-95411146 None:intergenic 60.0%
!! GGCTGTTTCTCCGGCGACAT+CGG - chr3.3:95411118-95411137 None:intergenic 60.0%
ACCGGCGGTTACTACGACGC+CGG + chr3.3:95409882-95409901 MS.gene014234:CDS 65.0%
ACCGGCGTCGTAGTAACCGC+CGG - chr3.3:95409886-95409905 None:intergenic 65.0%
CTCCGGCGACATCGGAAGCT+GGG - chr3.3:95411110-95411129 None:intergenic 65.0%
GGCTCGAACCCACGACCACA+AGG + chr3.3:95412712-95412731 MS.gene014234:intron 65.0%
GGGGAGCCGCATGGTTAAGG+AGG + chr3.3:95412454-95412473 MS.gene014234:CDS 65.0%
TCTCCGGCGACATCGGAAGC+TGG - chr3.3:95411111-95411130 None:intergenic 65.0%
GGTCGTGGGTTCGAGCCCCA+CGG - chr3.3:95412709-95412728 None:intergenic 70.0%
GTCGTGGGTTCGAGCCCCAC+GGG - chr3.3:95412708-95412727 None:intergenic 70.0%
TCGTGGGTTCGAGCCCCACG+GGG - chr3.3:95412707-95412726 None:intergenic 70.0%
CGTGGGTTCGAGCCCCACGG+GGG - chr3.3:95412706-95412725 None:intergenic 75.0%
GTGGGTTCGAGCCCCACGGG+GGG - chr3.3:95412705-95412724 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 95409666 95413469 95409666 ID=MS.gene014234
chr3.3 mRNA 95409666 95413469 95409666 ID=MS.gene014234.t1;Parent=MS.gene014234
chr3.3 exon 95409666 95410082 95409666 ID=MS.gene014234.t1.exon1;Parent=MS.gene014234.t1
chr3.3 CDS 95409666 95410082 95409666 ID=cds.MS.gene014234.t1;Parent=MS.gene014234.t1
chr3.3 exon 95411018 95411317 95411018 ID=MS.gene014234.t1.exon2;Parent=MS.gene014234.t1
chr3.3 CDS 95411018 95411317 95411018 ID=cds.MS.gene014234.t1;Parent=MS.gene014234.t1
chr3.3 exon 95412441 95412602 95412441 ID=MS.gene014234.t1.exon3;Parent=MS.gene014234.t1
chr3.3 CDS 95412441 95412602 95412441 ID=cds.MS.gene014234.t1;Parent=MS.gene014234.t1
chr3.3 exon 95412873 95413469 95412873 ID=MS.gene014234.t1.exon4;Parent=MS.gene014234.t1
chr3.3 CDS 95412873 95413469 95412873 ID=cds.MS.gene014234.t1;Parent=MS.gene014234.t1
Gene Sequence

>MS.gene014234

ATGGCATTGGCCAGCAAATCGTTGTTGTTTGTTCTACTACTGGTGATGCTGATTGGAGGAAGAAGAAGTGTGAATGCACATGATTATGCGGAGGCATTATCGAAGGCAATCATGTTCTTTGAAGGACAACGTTCGGGGTTTTTACCAGAGGACCAGAGACAGAAGTGGCGTGGGAATTCGGGTTTGAGTGATGGGTGGACTTACAACACTGATCTTACCGGCGGTTACTACGACGCCGGTGATAACATCAAATTTGGGTTTCCGATGGCGTTTACGACAACAATGTTGTCGTGGAGTGTGATTGAGTTTGGTGAAAACATGCCTCCTAATGAACTCAGAAACGCTTTGGTCGCAATTCGTTGGAGTACTGATTATTTGCTTAAGACTGTTTCTCAGTCTAACCGCATTTTTGTTCAGGTACAATTTACTACTGAATCGTTGGGTTGACTCACTCACTCACTCACGGACGGTTACATTACACTTTTCACCACTTCTCTTTCTCACTCACTCACTCGCACCTACTCACTCCTTCCTCTTCCTTTATTTATTTATTTATTTATTACATTTTGGATGCATAATTAGTTTATGTATTTTTTTCATCCCTTAATCAAAAAAGAAATTTACGGTATTCCTAAATCAATTTATTGAAATGGAAAACCATCGTGCGTTCTTCCTTGATAGCTGTGCCAGTTTATTTACATTTACGATCCGCTTTCAGTTTTTTTTTTTTGTTCACATTTAGAAATATAGGTAATCCTTCCATTTGTATTTTACTTTTTAGATTCATTCAATTAATGATGTATGTGGTGAATGAATCTAAAAAGTAAAATTTGATTGTATAAAAAAACGGAGGGAGTAGTAATTTTAGTCATCACTACCATGTTTAGTCGTTCCTAAGAAAAATGATGATTTTGACATTTCCCTTTATTTTTGTCATCACTACAAAGGTTTATGTAAAATAATTTGATTTTATTACTACTAAAAAATAAAAGTGCATTTTTAACACAAAATTTTCCGTGTCATTATGTGGACTGGAGTGGACCAGTTCGTATCCTTGAAGTCCGTGAATTTCATCGGCTTTGCATTGCAACTGTCTTCTAAATAAATGCAATATTTCGTTACTTTACCATTTCCGTTTCGATTATAACTGTATACCCACGCGCCAAACATGGCAGTGTTACTCATCTTCCATCCAATTTTTAAATTAATGAGAATTCTTTTCACTTTTGTTTAATCTCAAATTTATATTAGATATATCAAAAAATGGTTGATGACAAAATTTGGATGTGTCTAAATGTTCACGTAATTATTAAATTACATGACATGACATTGTACATGCTACTATATATTAGGTGGGTGAACCAACCTCAGACCACAACTGTTGGGAGAGGCCAGAAGACATGGACACAAACAGGAAAGTGTATGCTGTTGATGCACCTAACCCAGCTTCCGATGTCGCCGGAGAAACAGCCGCCGCACTTGCTGCTTCTTCGATGGCATTCCGATCATCGGATCCCGGTTATTCTGAGACATTACTCAGAAATGCTGTTAAGGCATTTCAATATGCAGACAGTTACAGGGGCGCATACAGTGACAATGCTGATGTTAAGGATGGTGTCTGTCCTTATTATTGTGATTTTGATGGATACCAGGTTAGTAAGTAGTATAGTTGACTCTTCTTTTCAATTACTATGTATTGCATTTTTCCTTTTTATAGGTATCCGATGTTATCGTTTTGAATTTTCTATTAATAAGACATTGATAATGATAGTATATGGACAATGATATTGCATTGCCTTCACGTGATCAAACACTCTAACTAATTGCTTTAAATTAGTAGATGAACAAATCAATAAGCAAAAGATAATTAAAATCCGAAGCAAACTATTGTGGCAAAATTGAATTATTATAGTACTATACTATGTTAGTTTGTTGCTTTATATGTATTCATTTCATATCATATGGGCTATGGCATGGGAAGTTATTTTCCCACATCCACCTTTTACACTCAATTTCTAATAATAAATACTTTTTGGTTTTATTTCTAATTATGAATTTAGAATTATAAAAACAGGAATTAGAGATAAAGTATAAATAAATGAGAATAAAACAAGTGATTTTGCGAAATAAGGTTTGAAAAATATAAGCGGTGGGTTTGGAATTTTTTGCCAGTTAGGACATGTCGGTGTAATGGATGAAATAACGATGCACCGTTTTGCAGAAGCTTTGTTGTTTTTGTCAAAATTACTGTGATTTTTTAAACTCATTGAGAATCCAAATATGCACTATTCAATTTATTATATTATAGCATCTATCTATATATAACTTGTGAACATTTAGCTTATTTTGCGTTTTGTCGCATTGTAGTGTATAGATGATATAAATTGACGATCGATGACAACTCTGTCTCTAACTGACAATTTGTTTAAGTGAGTGAATGAATTAGTTAATTAATTAAAAGTGGAGTAATTCACTAATTCATTCACGTGATCCCGACACATAATGGAAGTGTTACACTAATTGCATCTCGAGAATTTTTGGCACTGTTCAAAACTGATATATGATTATGCTTCAATCAACATCGAATTATATAGGAAATTGTTTTAATGAAATTTGAGAACAATACTCAATTGATTATTACTAGTACTATGTGAAGGGGTAATATTTGTCTGAGGGCAATTCGTGTATTTAGTGGAATAATAGTAACTTAGATTTTGACATGTCAATTGCTATTTGCTACACTATTAATTGGTTTGGATACATTACATTGTACAGGACGAATTGTTATGGGGAGCCGCATGGTTAAGGAGGGCTACTCAGGATGAAAATTTCCTAAACTACATTCAAAGCAATGGTAAAACACTCGGTGCTGAAGACAACATTAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTCAACGTTCTTGTCTCCAAGGTTCCATCTCTATTCAATTCAAATTTTATTAAAAATAAATCAGTTTAACTTTTATCTTTTTACTAAAATTAAAAAAAAAACAAAAAAAAAAACAATTCGCCCCCCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCTAGACGGGCTGTTTTATTCTTTGTCTTGAAATTGAAATCACACAAATGTATATATGTGACATTGTTTTAATGTAAATGTTGATCAAAAGTAAATGAATTGTTGTTATAGGAAGTCCTAGAAGGAAATGTTGAATCTCTTGAATCTTACAAGACCTCAGCAGAGAGCTTCCTATGCACACTACTACCTGAAACATCAAGTTCACACATCGAGTACACTCCTGGTGGACTCATATACAGACCAGGTGGAAGCAACTTACAACATGCAACTTCAATTGCTTTCCTTGAGTTAGTCTACGCCAATTACTTATCTCGCACGTCACAAACCATCAATTGTGGCAATGTTTATGTTAGTGCACAAACACTTCGGGAGCGTGCCAAGAGACAAGTTGATTACATTTTAGGTGATAACCCCTTGGGTTTATCTTACATGGTTGGTTATGGTAACAATTATCCACAACGTATTCATCATCGTGGCTCATCTCTACCTTCTATTAAGGACCATCCTCAACAGATTGCATGCAAGGAAGGTTCAATATACTTCAATTCAACAAATCCTAACCCAAATGTTCTTGTAGGAGCTATTGTGGGAGGACCTGGAGAAGATGATGTTTATGTGGATGACAGGGCTGATTATAGAAAATCTGAGCCAACCACATATATTAATGCGCCATTTGTTGGGGTTTTAGCATATTTTGTTGCTAATTAA
Protein sequence

>MS.gene014234.t1

MALASKSLLFVLLLVMLIGGRRSVNAHDYAEALSKAIMFFEGQRSGFLPEDQRQKWRGNSGLSDGWTYNTDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGENMPPNELRNALVAIRWSTDYLLKTVSQSNRIFVQVGEPTSDHNCWERPEDMDTNRKVYAVDAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAVKAFQYADSYRGAYSDNADVKDGVCPYYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLEGNVESLESYKTSAESFLCTLLPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNVYVSAQTLRERAKRQVDYILGDNPLGLSYMVGYGNNYPQRIHHRGSSLPSIKDHPQQIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYVDDRADYRKSEPTTYINAPFVGVLAYFVAN